Pregenerated sensors for USO1 (Homo sapiens)
Ensembl gene IDs: ENSG00000138768Ensembl transcript IDs: ENST00000264904.8, ENST00000508454.1, ENST00000512893.1, ENST00000514213.7
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCCAGCCCTCTAAGCCCGGAAACAGCCGCCAGCAGCGGCCAAGATaGGCATGCGCGGGGACGTGGCATTACGTGGCGGCTCGAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LQPSKPGNSRQQRPR*ACAGTWHYVAARRL Trigger: CAACCTTCGAGCCGCCACGTAATGCCACGTCCCCGCGCATGCGCATCTTGGCCGCTGCTGGCGGCTGTTTCCGGGCTTAGAGGGCTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514213.7 |
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| CDS GCA 90 bp | CCCTCTAAGCCCGGAAACAGCCGCCAGCAGCGGCCAAGATGCGCATaGGCGGGGACGTGGCATTACGTGGCGGCTCGAAGGTTGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: PSKPGNSRQQRPRCA*AGTWHYVAARRLKA Trigger: TGCCTTCAACCTTCGAGCCGCCACGTAATGCCACGTCCCCGCGCATGCGCATCTTGGCCGCTGCTGGCGGCTGTTTCCGGGCTTAGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514213.7 |
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| CDS CCA 90 bp | ATAGTACAAAGCTGCTGCAATAACCCACACTGGAACATAGCCTTCTaGCAGCTACTGGTAGCACCAGGAGGGTTGGTGGGAGATACCAAT | + |
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Preference number: 5 (lower is better) Translates to: IVQSCCNNPHWNIAF*QLLVAPGGLVGDTN Trigger: ATTGGTATCTCCCACCAACCCTCCTGGTGCTACCAGTAGCTGCCAGAAGGCTATGTTCCAGTGTGGGTTATTGCAGCAGCTTTGTACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CCA 90 bp | ACCCTGAGCAACTGTTCTTTCTGGGTGGCATTTTCTTGCAACGCATaGGCAAGGGCCACAGCAGCACACCAGTTTGAAAGTGAATCAGTA | + |
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Preference number: 5 (lower is better) Translates to: TLSNCSFWVAFSCNA*ARATAAHQFESESV Trigger: TACTGATTCACTTTCAAACTGGTGTGCTGCTGTGGCCCTTGCCCATGCGTTGCAAGAAAATGCCACCCAGAAAGAACAGTTGCTCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 90 bp | AGGATATCAGCAGGAACCCCAGTAGCCATTAGGATAGTACAAAGCTaGTGCAATAACCCACACTGGAACATAGCCTTCTGGCAGCTACTG | + |
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Preference number: 5 (lower is better) Translates to: RISAGTPVAIRIVQS*CNNPHWNIAFWQLL Trigger: CAGTAGCTGCCAGAAGGCTATGTTCCAGTGTGGGTTATTGCAGCAGCTTTGTACTATCCTAATGGCTACTGGGGTTCCTGCTGATATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 90 bp | ATATCAGCAGGAACCCCAGTAGCCATTAGGATAGTACAAAGCTGCTaGAATAACCCACACTGGAACATAGCCTTCTGGCAGCTACTGGTA | + |
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Preference number: 5 (lower is better) Translates to: ISAGTPVAIRIVQSC*NNPHWNIAFWQLLV Trigger: TACCAGTAGCTGCCAGAAGGCTATGTTCCAGTGTGGGTTATTGCAGCAGCTTTGTACTATCCTAATGGCTACTGGGGTTCCTGCTGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 90 bp | TCTTTTCCTAGCTGTATTTTAAGAAGATTATACTGGTCTTTGTGCTaGTGGATCTGTGATACTTGCTGTGTGACTGCCGTCTGGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SFPSCILRRLYWSLC*WICDTCCVTAVWSC Trigger: ACAGCTCCAGACGGCAGTCACACAGCAAGTATCACAGATCCAGCAGCACAAAGACCAGTATAATCTTCTTAAAATACAGCTAGGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 90 bp | ATTCTTCTATCTCTTCTCGCAATCTACCAATTTCTTCTGGCTGAATaGCATTCATCTGAGCCCCCTCACTGTAAGAACCTTGATGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: ILLSLLAIYQFLLAE*HSSEPPHCKNLDAD Trigger: ATCAGCATCAAGGTTCTTACAGTGAGGGGGCTCAGATGAATGGCATTCAGCCAGAAGAAATTGGTAGATTGCGAGAAGAGATAGAAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000264904.8 ENST00000508454.1 ENST00000514213.7 |
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| CDS CCA 90 bp | TTTCCTAGCTGTATTTTAAGAAGATTATACTGGTCTTTGTGCTGCTaGATCTGTGATACTTGCTGTGTGACTGCCGTCTGGAGCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: FPSCILRRLYWSLCC*ICDTCCVTAVWSCS Trigger: TGAACAGCTCCAGACGGCAGTCACACAGCAAGTATCACAGATCCAGCAGCACAAAGACCAGTATAATCTTCTTAAAATACAGCTAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 90 bp | ATCTGTGATACTTGCTGTGTGACTGCCGTCTGGAGCTGTTCATTTTaGCATTTTAATGTAGAAACCTGCTGCCTTAATTCCTCAAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: ICDTCCVTAVWSCSF*HFNVETCCLNSSSW Trigger: CCAACTTGAGGAATTAAGGCAGCAGGTTTCTACATTAAAATGTCAAAATGAACAGCTCCAGACGGCAGTCACACAGCAAGTATCACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 90 bp | TCTATTGTTCCTAGAGATTTGAAAACTAGATATGATCTAGATCCTTaGCAGGATCTTCACTTTCATCATCCTCATCCTCTTGGTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SIVPRDLKTRYDLDP*QDLHFHHPHPLGLQ Trigger: CTGGAGACCAAGAGGATGAGGATGATGAAAGTGAAGATCCTGGCAAGGATCTAGATCATATCTAGTTTTCAAATCTCTAGGAACAATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 90 bp | TTTTCTGCAATTTGTCCTGTAAGAAATGGAACATTGGCTGAATTGTaGAGAAAATGCGTTACTGCAATGGGACAATTGCTTAGCCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: FSAICPVRNGTLAEL*RKCVTAMGQLLSQV Trigger: TACCTGGCTAAGCAATTGTCCCATTGCAGTAACGCATTTTCTTCACAATTCAGCCAATGTTCCATTTCTTACAGGACAAATTGCAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 90 bp | TCAAATATCATGTATTCTGGACTGGGAAAGTTTGGCTGGGGTTTCTaGGATGCTCTGGAATACAACTCATGTTTGCTAATAAATCCTAGT | + |
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Preference number: 5 (lower is better) Translates to: SNIMYSGLGKFGWGF*DALEYNSCLLINPS Trigger: ACTAGGATTTATTAGCAAACATGAGTTGTATTCCAGAGCATCTCAGAAACCCCAGCCAAACTTTCCCAGTCCAGAATACATGATATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 90 bp | CTTCTGTTTTCTGTAACAGTTCCTGCTTTTCTGTCTGTAGTTTGGTaGTCTCCACAGATTGTGAGTTTAACTGAGACTTTAAAGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LLFSVTVPAFLSVVW*SPQIVSLTETLKLP Trigger: TGGCAACTTTAAAGTCTCAGTTAAACTCACAATCTGTGGAGATCACCAAACTACAGACAGAAAAGCAGGAACTGTTACAGAAAACAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 90 bp | TTAGTTATAACACCTTCAAGTTCTTTTACCAGCTTCGTAAACTCATaGTCAAATATCATGTATTCTGGACTGGGAAAGTTTGGCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LVITPSSSFTSFVNS*SNIMYSGLGKFGWG Trigger: ACCCCAGCCAAACTTTCCCAGTCCAGAATACATGATATTTGATCATGAGTTTACGAAGCTGGTAAAAGAACTTGAAGGTGTTATAACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 90 bp | CATTGGCTGAATTGTGAAGAAAATGCGTTACTGCAATGGGACAATTaGTTAGCCAGGTACAAAGCAACATTAATAATCCAACTCTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: HWLNCEENALLQWDN*LARYKATLIIQLLF Trigger: AAACAAGAGTTGGATTATTAATGTTGCTTTGTACCTGGCTAAGCAATTGTCCCATTGCAGTAACGCATTTTCTTCACAATTCAGCCAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CCA 90 bp | GAAATGGAACATTGGCTGAATTGTGAAGAAAATGCGTTACTGCAATaGGACAATTGCTTAGCCAGGTACAAAGCAACATTAATAATCCAA | + |
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Preference number: 5 (lower is better) Translates to: EMEHWLNCEENALLQ*DNCLARYKATLIIQ Trigger: TTGGATTATTAATGTTGCTTTGTACCTGGCTAAGCAATTGTCCCATTGCAGTAACGCATTTTCTTCACAATTCAGCCAATGTTCCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 90 bp | TTCTCAGTTTGTAAAATGGCAATGGTACTATTAGATGAATCCAGCTaGTCTTTAATGGCAGTTCTTTCCTCAGACAGAGCTTTAATTTCA | + |
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Preference number: 5 (lower is better) Translates to: FSVCKMAMVLLDESS*SLMAVLSSDRALIS Trigger: TGAAATTAAAGCTCTGTCTGAGGAAAGAACTGCCATTAAAGAGCAGCTGGATTCATCTAATAGTACCATTGCCATTTTACAAACTGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 72 bp | CCCGGAAACAGCCGCCAGCAGCGGCCAAGATGCGCATaGGCGGGGACGTGGCATTACGTGGCGGCTCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PGNSRQQRPRCA*AGTWHYVAARR Trigger: CCTTCGAGCCGCCACGTAATGCCACGTCCCCGCGCATGCGCATCTTGGCCGCTGCTGGCGGCTGTTTCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514213.7 |
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| CDS GCA 72 bp | GCCTGGGCCCCAATCCCGCACTCTACACACTCCTACTaGTGCCACCACCGCCTCCAACTCGGCGGCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: AWAPIPHSTHSY*CHHRLQLGGHS Trigger: GGAGTGGCCGCCGAGTTGGAGGCGGTGGTGGCAGCAGTAGGAGTGTGTAGAGTGCGGGATTGGGGCCCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 72 bp | TCTAAGCCCGGAAACAGCCGCCAGCAGCGGCCAAGATaGGCATGCGCGGGGACGTGGCATTACGTGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SKPGNSRQQRPR*ACAGTWHYVAA Trigger: AGCCGCCACGTAATGCCACGTCCCCGCGCATGCGCATCTTGGCCGCTGCTGGCGGCTGTTTCCGGGCTTAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 72 bp | TGGGCCCCAATCCCGCACTCTACACACTCCTACTGCTaGCACCACCGCCTCCAACTCGGCGGCCACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: WAPIPHSTHSYC*HHRLQLGGHSS Trigger: GCTGGAGTGGCCGCCGAGTTGGAGGCGGTGGTGGCAGCAGTAGGAGTGTGTAGAGTGCGGGATTGGGGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CCA 72 bp | CGCCAGCAGCGGCCAAGATGCGCATGCGCGGGGACGTaGCATTACGTGGCGGCTCGAAGGTTGAAGGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: RQQRPRCACAGT*HYVAARRLKAK Trigger: TTTTGCCTTCAACCTTCGAGCCGCCACGTAATGCCACGTCCCCGCGCATGCGCATCTTGGCCGCTGCTGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514213.7 |
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| CDS CCA 72 bp | AGCTGCTGCAATAACCCACACTGGAACATAGCCTTCTaGCAGCTACTGGTAGCACCAGGAGGGTTGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SCCNNPHWNIAF*QLLVAPGGLVG Trigger: TCCCACCAACCCTCCTGGTGCTACCAGTAGCTGCCAGAAGGCTATGTTCCAGTGTGGGTTATTGCAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CAA 72 bp | AACCCTGAGCAACTGTTCTTTCTGGGTGGCATTTTCTaGCAACGCATGGGCAAGGGCCACAGCAGCACACCA | + |
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Preference number: 6 (lower is better) Translates to: NPEQLFFLGGIF*QRMGKGHSSTP Trigger: TGGTGTGCTGCTGTGGCCCTTGCCCATGCGTTGCAAGAAAATGCCACCCAGAAAGAACAGTTGCTCAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CAA 72 bp | ATAGCCTTCTGGCAGCTACTGGTAGCACCAGGAGGGTaGGTGGGAGATACCAATACACGAACAAGCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: IAFWQLLVAPGG*VGDTNTRTSCS Trigger: GCTACAGCTTGTTCGTGTATTGGTATCTCCCACCAACCCTCCTGGTGCTACCAGTAGCTGCCAGAAGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CAA 90 bp | CACTGGAACATAGCCTTCTGGCAGCTACTGGTAGCACCAGGAGGGTaGGTGGGAGATACCAATACACGAACAAGCTGTAGCATTAGATGT | + |
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Preference number: 6 (lower is better) Translates to: HWNIAFWQLLVAPGG*VGDTNTRTSCSIRC Trigger: ACATCTAATGCTACAGCTTGTTCGTGTATTGGTATCTCCCACCAACCCTCCTGGTGCTACCAGTAGCTGCCAGAAGGCTATGTTCCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 72 bp | GGAACCCCAGTAGCCATTAGGATAGTACAAAGCTGCTaGAATAACCCACACTGGAACATAGCCTTCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GTPVAIRIVQSC*NNPHWNIAFWQ Trigger: CTGCCAGAAGGCTATGTTCCAGTGTGGGTTATTGCAGCAGCTTTGTACTATCCTAATGGCTACTGGGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 72 bp | AAGAAGATTATACTGGTCTTTGTGCTGCTGGATCTGTaGTACTTGCTGTGTGACTGCCGTCTGGAGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KKIILVFVLLDL*YLLCDCRLELF Trigger: GAACAGCTCCAGACGGCAGTCACACAGCAAGTATCACAGATCCAGCAGCACAAAGACCAGTATAATCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 72 bp | GGTCTTTGTGCTGCTGGATCTGTGATACTTGCTGTGTaGCTGCCGTCTGGAGCTGTTCATTTTGACATTTTA | + |
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Preference number: 6 (lower is better) Translates to: GLCAAGSVILAV*LPSGAVHFDIL Trigger: TAAAATGTCAAAATGAACAGCTCCAGACGGCAGTCACACAGCAAGTATCACAGATCCAGCAGCACAAAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 72 bp | TCTCTTCTCGCAATCTACCAATTTCTTCTGGCTGAATaGCATTCATCTGAGCCCCCTCACTGTAAGAACCTT | + |
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Preference number: 6 (lower is better) Translates to: SLLAIYQFLLAE*HSSEPPHCKNL Trigger: AAGGTTCTTACAGTGAGGGGGCTCAGATGAATGGCATTCAGCCAGAAGAAATTGGTAGATTGCGAGAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000264904.8 ENST00000508454.1 ENST00000514213.7 |
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| CDS TCA 72 bp | AAAGAAACTGGAGGGTTGCCAATACTTGTAGCAAGTTaGACCCTGAGCAACTGTTCTTTCTGGGTGGCATTT | + |
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Preference number: 6 (lower is better) Translates to: KETGGLPILVAS*TLSNCSFWVAF Trigger: AAATGCCACCCAGAAAGAACAGTTGCTCAGGGTTCAACTTGCTACAAGTATTGGCAACCCTCCAGTTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 72 bp | ATGCCCAACAAAAGGGCACATAAGCCTTGGACCAACTaGTCTTCTTCTCCAAGATTTTCTGCAATTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: MPNKRAHKPWTN*SSSPRFSAICP Trigger: AGGACAAATTGCAGAAAATCTTGGAGAAGAAGAGCAGTTGGTCCAAGGCTTATGTGCCCTTTTGTTGGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 72 bp | TTCTGGACTGGGAAAGTTTGGCTGGGGTTTCTGAGATaGTCTGGAATACAACTCATGTTTGCTAATAAATCC | + |
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Preference number: 6 (lower is better) Translates to: FWTGKVWLGFLR*SGIQLMFANKS Trigger: GGATTTATTAGCAAACATGAGTTGTATTCCAGAGCATCTCAGAAACCCCAGCCAAACTTTCCCAGTCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 72 bp | GTAGTCTTGGTTTACTTGGCAGCCTCGAATAACTTCTaGTACAGTATTTATGGTCTCAGTCAGGATATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VVLVYLAASNNF*YSIYGLSQDIS Trigger: GCTGATATCCTGACTGAGACCATAAATACTGTATCAGAAGTTATTCGAGGCTGCCAAGTAAACCAAGACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS GCA 72 bp | ATTTTCTGGATTGCACCATTGCTTCTTGTTAGTGCCTaGAGTAGTAAGACGCCATCATTACGTATAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: IFWIAPLLLVSA*SSKTPSLRITS Trigger: GGAAGTTATACGTAATGATGGCGTCTTACTACTGCAGGCACTAACAAGAAGCAATGGTGCAATCCAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CCA 72 bp | CCAATACACGAACAAGCTGTAGCATTAGATGTAGATTaGTCACTTTCTGTGCAGACCAGCCAGAATTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PIHEQAVALDVD*SLSVQTSQNFH Trigger: ATGAAAATTCTGGCTGGTCTGCACAGAAAGTGACCAATCTACATCTAATGCTACAGCTTGTTCGTGTATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CAA 72 bp | CAAAAGCAACAATTTTCTGGATTGCACCATTGCTTCTaGTTAGTGCCTGCAGTAGTAAGACGCCATCATTAC | + |
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Preference number: 6 (lower is better) Translates to: QKQQFSGLHHCF*LVPAVVRRHHY Trigger: GTAATGATGGCGTCTTACTACTGCAGGCACTAACAAGAAGCAATGGTGCAATCCAGAAAATTGTTGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CAA 72 bp | CATGATCAAATATCATGTATTCTGGACTGGGAAAGTTaGGCTGGGGTTTCTGAGATGCTCTGGAATACAACT | + |
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Preference number: 6 (lower is better) Translates to: HDQISCILDWES*AGVSEMLWNTT Trigger: AGTTGTATTCCAGAGCATCTCAGAAACCCCAGCCAAACTTTCCCAGTCCAGAATACATGATATTTGATCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CAA 72 bp | AATAATGCTGACAGTCTTCCTTCTACATCAGTAGTTTaGGTGGCTATTATAGTCTCGGTCTCTCCTTGTACC | + |
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Preference number: 6 (lower is better) Translates to: NNADSLPSTSVV*VAIIVSVSPCT Trigger: GGTACAAGGAGAGACCGAGACTATAATAGCCACCAAAACTACTGATGTAGAAGGAAGACTGTCAGCATTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CAA 90 bp | GTCTCTTGTAATAATGCTGACAGTCTTCCTTCTACATCAGTAGTTTaGGTGGCTATTATAGTCTCGGTCTCTCCTTGTACCTCAACTGAT | + |
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Preference number: 6 (lower is better) Translates to: VSCNNADSLPSTSVV*VAIIVSVSPCTSTD Trigger: ATCAGTTGAGGTACAAGGAGAGACCGAGACTATAATAGCCACCAAAACTACTGATGTAGAAGGAAGACTGTCAGCATTATTACAAGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CCA 72 bp | CATTGGCTGAATTGTGAAGAAAATGCGTTACTGCAATaGGACAATTGCTTAGCCAGGTACAAAGCAACATTA | + |
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Preference number: 6 (lower is better) Translates to: HWLNCEENALLQ*DNCLARYKATL Trigger: TAATGTTGCTTTGTACCTGGCTAAGCAATTGTCCCATTGCAGTAACGCATTTTCTTCACAATTCAGCCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 72 bp | TTCTGCAATTTGTCCTGTAAGAAATGGAACATTGGCTaGATTGTGAAGAAAATGCGTTACTGCAATGGGACA | + |
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Preference number: 6 (lower is better) Translates to: FCNLSCKKWNIG*IVKKMRYCNGT Trigger: TGTCCCATTGCAGTAACGCATTTTCTTCACAATTCAGCCAATGTTCCATTTCTTACAGGACAAATTGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS TCA 72 bp | ATTTGTCCTGTAAGAAATGGAACATTGGCTGAATTGTaGAGAAAATGCGTTACTGCAATGGGACAATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ICPVRNGTLAEL*RKCVTAMGQLL Trigger: AAGCAATTGTCCCATTGCAGTAACGCATTTTCTTCACAATTCAGCCAATGTTCCATTTCTTACAGGACAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CAA 72 bp | TTAGCCAGGTACAAAGCAACATTAATAATCCAACTCTaGTTTGTATTTTGCTTCCCCGTCTGTCGATCTTAT | + |
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Preference number: 6 (lower is better) Translates to: LARYKATLIIQL*FVFCFPVCRSY Trigger: ATAAGATCGACAGACGGGGAAGCAAAATACAAACAAGAGTTGGATTATTAATGTTGCTTTGTACCTGGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264904.8 |
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| CDS GCA 72 bp | AATTGTGAAGAAAATGCGTTACTGCAATGGGACAATTaGTTAGCCAGGTACAAAGCAACATTAATAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: NCEENALLQWDN*LARYKATLIIQ Trigger: TTGGATTATTAATGTTGCTTTGTACCTGGCTAAGCAATTGTCCCATTGCAGTAACGCATTTTCTTCACAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264904.8 ENST00000514213.7 |
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| CDS CCA 72 bp | AATTTTCCTGGTAAACAATTCAACACTGGAACAGTGTaGCTGGTAGCAATATCACAATTATTATGTAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: NFPGKQFNTGTV*LVAISQLLCKA Trigger: AGCTTTACATAATAATTGTGATATTGCTACCAGCCACACTGTTCCAGTGTTGAATTGTTTACCAGGAAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512893.1 |
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| CDS CAA 72 bp | TTAGCCAGGTACAAAGCAACATTAATAATCCAACTCTaGTTTGTATTTTGCTTCCCTGTGAAAGAATATTGG | + |
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Preference number: 6 (lower is better) Translates to: LARYKATLIIQL*FVFCFPVKEYW Trigger: CCAATATTCTTTCACAGGGAAGCAAAATACAAACAAGAGTTGGATTATTAATGTTGCTTTGTACCTGGCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514213.7 |
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