RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USHBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130307

Ensembl transcript IDs: ENST00000252597.8, ENST00000324554.9, ENST00000431146.6, ENST00000594190.5, ENST00000595993.5, ENST00000596436.5, ENST00000597928.5, ENST00000598309.1, ENST00000598570.5, ENST00000600286.1

Found 598 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGCCTCCCGCAGCTCTAGGCCCCGCTTCTCACGCCGCACCAGCTaGAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACC +
Preference number: 1 (lower is better)
Translates to: AASRSSRPRFSRRTS*SRSIRSARASLAAT
Trigger: GGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTGGTGCGGCGTGAGAAGCGGGGCCTAGAGCTGCGGGAGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 90 bp GCAGCGTCTCCTTCTCAGCTCGGATGGCCTCCAGGGAGGCCTGCGTaGGGACCAGCTCATCCTCTCGGCTACTCAGGGCCAGCCGGAGCC +
Preference number: 1 (lower is better)
Translates to: AASPSQLGWPPGRPA*GPAHPLGYSGPAGA
Trigger: GGCTCCGGCTGGCCCTGAGTAGCCGAGAGGATGAGCTGGTCCGCACGCAGGCCTCCCTGGAGGCCATCCGAGCTGAGAAGGAGACGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CCA 90 bp AGCCGGAGCCAGGCATTCCTCTCGGCCAGGCGAGCTGCCTCTCGCTaGCAGCTCCCTGCCCCTTCCTGCTTCCCAAGGGAACCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: SRSQAFLSARRAASR*QLPAPSCFPREPAP
Trigger: GGGAGCAGGTTCCCTTGGGAAGCAGGAAGGGGCAGGGAGCTGCCAGCGAGAGGCAGCTCGCCTGGCCGAGAGGAATGCCTGGCTCCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 90 bp TTCTGCAGCGTCTCCTTCTCAGCTCGGATGGCCTCCAGGGAGGCCTaGGTGCGGACCAGCTCATCCTCTCGGCTACTCAGGGCCAGCCGG +
Preference number: 1 (lower is better)
Translates to: FCSVSFSARMASREA*VRTSSSSRLLRASR
Trigger: CCGGCTGGCCCTGAGTAGCCGAGAGGATGAGCTGGTCCGCACGCAGGCCTCCCTGGAGGCCATCCGAGCTGAGAAGGAGACGCTGCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 90 bp GGGGCTGGTTGGGAAGAGACCCAAGGATCTGGGTGCTGGAATGGCTaGGGAGGCGCCGAAGCAGGGGGTGAGCCAGGGAGAAGGAGTCCT +
Preference number: 1 (lower is better)
Translates to: GAGWEETQGSGCWNG*GGAEAGGEPGRRSP
Trigger: AGGACTCCTTCTCCCTGGCTCACCCCCTGCTTCGGCGCCTCCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCTTCCCAACCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR TCA 90 bp AGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTaGATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGGCCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: SIRSARASLAATRSC*ICVFSSRGRAGPAW
Trigger: CCAGGCTGGCCCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 90 bp CAGGGACAGCAGGAAGGCCCTGATACCACTCTTCCTCGTCCCCGCTaGTGCCACCTCCGCTGCTATGTCCGCCACTGCTGTTTGCCCCAC +
Preference number: 1 (lower is better)
Translates to: QGQQEGPDTTLPRPR*CHLRCYVRHCCLPH
Trigger: GTGGGGCAAACAGCAGTGGCGGACATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGGAAGAGTGGTATCAGGGCCTTCCTGCTGTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 90 bp CTGGGTCCCAGGCTCTGCCCACCTGGCCACCATCAATGCCACTGGTaGCACCAGGGACAGCAGGAAGGCCCTGATACCACTCTTCCTCGT +
Preference number: 1 (lower is better)
Translates to: LGPRLCPPGHHQCHW*HQGQQEGPDTTLPR
Trigger: ACGAGGAAGAGTGGTATCAGGGCCTTCCTGCTGTCCCTGGTGGCACCAGTGGCATTGATGGTGGCCAGGTGGGCAGAGCCTGGGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 90 bp GCGATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTaGCCACCTGGCCACCATCAATGCCACTGGTGCCACCAGGGACAG +
Preference number: 1 (lower is better)
Translates to: AMLPVPGLTSLGPRL*PPGHHQCHWCHQGQ
Trigger: CTGTCCCTGGTGGCACCAGTGGCATTGATGGTGGCCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 90 bp GCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTaGCCACCATCAATGCCACTGGTGCCACCAGGGACAGCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: ASSWANFSGSQALPT*PPSMPLVPPGTAGR
Trigger: CCTTCCTGCTGTCCCTGGTGGCACCAGTGGCATTGATGGTGGCCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 90 bp GCAGCTCTTGAACCTCTTTCTGCAGCGTCTCCTTCTCAGCTCGGATaGCCTCCAGGGAGGCCTGCGTGCGGACCAGCTCATCCTCTCGGC +
Preference number: 1 (lower is better)
Translates to: AALEPLSAASPSQLG*PPGRPACGPAHPLG
Trigger: GCCGAGAGGATGAGCTGGTCCGCACGCAGGCCTCCCTGGAGGCCATCCGAGCTGAGAAGGAGACGCTGCAGAAAGAGGTTCAAGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 90 bp CCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATaGAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGG +
Preference number: 1 (lower is better)
Translates to: PGLRETGQLELQLWL*NLTDPRNASVPGTW
Trigger: CCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 90 bp TCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTaGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGG +
Preference number: 1 (lower is better)
Translates to: SLPGLRETGQLELQL*LCNLTDPRNASVPG
Trigger: CCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 90 bp TCTCTGGGTCCCAGGCTCTGCCCACCTGGCCACCATCAATGCCACTaGTGCCACCAGGGACAGCAGGAAGGCCCTGATACCACTCTTCCT +
Preference number: 1 (lower is better)
Translates to: SLGPRLCPPGHHQCH*CHQGQQEGPDTTLP
Trigger: AGGAAGAGTGGTATCAGGGCCTTCCTGCTGTCCCTGGTGGCACCAGTGGCATTGATGGTGGCCAGGTGGGCAGAGCCTGGGACCCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR TCA 90 bp TCTCCCTGGGAAGGGGCTGCCAGGAGAAGCTCTGTCCAGTCCCCATaGATCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCA +
Preference number: 1 (lower is better)
Translates to: SPWEGAARRSSVQSP*IPPWASGDRPVGTS
Trigger: TGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCCTGGCAGCCCCTTCCCAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 90 bp CCAGCAGCCTCCATGCTTCCTTTTCAGCTGCTTGCAGGTCACTCATaGGGGCTTCGTCTCCTGCTCCTGAGTCGGCCTCCCGCAGAGCAA +
Preference number: 1 (lower is better)
Translates to: PAASMLPFQLLAGHS*GLRLLLLSRPPAEQ
Trigger: TTGCTCTGCGGGAGGCCGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGAAGCATGGAGGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 90 bp GCACCATGGCTTCTGCACGGGGCACAGTGGGCATGGGTGCCAAGGTaGGGCCAGGCTCTGAGAGAATCTTCATTAGAGAACGGCGCTCCT +
Preference number: 1 (lower is better)
Translates to: APWLLHGAQWAWVPR*GQALRESSLENGAP
Trigger: AGGAGCGCCGTTCTCTAATGAAGATTCTCTCAGAGCCTGGCCCCACCTTGGCACCCATGCCCACTGTGCCCCGTGCAGAAGCCATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 90 bp GGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCTGAGACCGTCTaGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAG +
Preference number: 1 (lower is better)
Translates to: GLCINPCSARHSETV*LAPSEPPVPAPCAE
Trigger: CTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR TCA 90 bp TTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTaGGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTC +
Preference number: 1 (lower is better)
Translates to: FSCLQVTHGGFVSCS*VGLPQSKQNPVCLF
Trigger: GAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 90 bp CTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTaGGGTGGGCTTATCCACACTGCTGCCTTCAGGGCTTGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: LETLDIASELESHFL*GGLIHTAAFRAWLW
Trigger: CCACAGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 90 bp CCAGAATGGCCTGCACCATGGCTTCTGCACGGGGCACAGTGGGCATaGGTGCCAAGGTGGGGCCAGGCTCTGAGAGAATCTTCATTAGAG +
Preference number: 1 (lower is better)
Translates to: PEWPAPWLLHGAQWA*VPRWGQALRESSLE
Trigger: CTCTAATGAAGATTCTCTCAGAGCCTGGCCCCACCTTGGCACCCATGCCCACTGTGCCCCGTGCAGAAGCCATGGTGCAGGCCATTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 90 bp TGCTCCTGCATCCATGGCAGCCTCCTCTTGTGCCAGCAGCCTCCATaGTTCCTTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTC +
Preference number: 1 (lower is better)
Translates to: CSCIHGSLLLCQQPP*FLFSCLQVTHGGFV
Trigger: GACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGAAGCATGGAGGCTGCTGGCACAAGAGGAGGCTGCCATGGATGCAGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 90 bp CTGTCTGCCTCAGAGCTGCTAGAACCACTGCCTGAGCCACCTGCTTaGTTGTGGGAAAGATGTGGGCAGGGCTCCAGCCTCAAGAGGGAA +
Preference number: 1 (lower is better)
Translates to: LSASELLEPLPEPPA*LWERCGQGSSLKRE
Trigger: TTCCCTCTTGAGGCTGGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTCTAGCAGCTCTGAGGCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CCA 90 bp TGCTCCATCTGGGCTTCCATGATGTGCATCTCAGGACTGAGGGGCTaGTTGGGAAGAGACCCAAGGATCTGGGTGCTGGAATGGCTGCGG +
Preference number: 1 (lower is better)
Translates to: CSIWASMMCISGLRG*LGRDPRIWVLEWLR
Trigger: CCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCTTCCCAACCAGCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCAGATGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 90 bp TTCTTCATTGCCTGGCCACACCCCATCAGGCCCTGGACACCCATGTaGACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAATC +
Preference number: 1 (lower is better)
Translates to: FFIAWPHPIRPWTPM*TSFPHAKCAPTCQI
Trigger: GATTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATGGGGTGTGGCCAGGCAATGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR GCA 90 bp CCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCCCAGGTTaGTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTG +
Preference number: 1 (lower is better)
Translates to: PRNASVPGTWSHSPG*FWPDPTDMKFTFHL
Trigger: CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR GCA 90 bp TTCTCAATGCTCCCCCGGAGTTGCTCCATCTGGGCTTCCATGATGTaGATCTCAGGACTGAGGGGCTGGTTGGGAAGAGACCCAAGGATC +
Preference number: 1 (lower is better)
Translates to: FSMLPRSCSIWASMM*ISGLRGWLGRDPRI
Trigger: GATCCTTGGGTCTCTTCCCAACCAGCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCATTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CCA 90 bp CGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTTCACTGTaGGACACTGGTTCTGAGTGCTTCAGGACACTCAGCTCGGCTGGG +
Preference number: 1 (lower is better)
Translates to: RRASRTLYASSQCSL*DTGSECFRTLSSAG
Trigger: CCCAGCCGAGCTGAGTGTCCTGAAGCACTCAGAACCAGTGTCCCACAGTGAACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR TCA 90 bp AGGGAGTTGGCAAGAGCTGCGTGTTCTGGGACTGGCATCCCAGGGTaGGACTGGGAGGCTGTGAATTCAAGGAAGAGGCTAGATAGAGGT +
Preference number: 1 (lower is better)
Translates to: RELARAACSGTGIPG*DWEAVNSRKRLDRG
Trigger: ACCTCTATCTAGCCTCTTCCTTGAATTCACAGCCTCCCAGTCTCACCCTGGGATGCCAGTCCCAGAACACGCAGCTCTTGCCAACTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CCA 90 bp AATGCGTCAGTCCCAGGGACCTGGTCCCATAGCCCAGGTTGCTTCTaGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCA +
Preference number: 1 (lower is better)
Translates to: NASVPGTWSHSPGCF*PDPTDMKFTFHLVP
Trigger: TGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCCTGGGACTGACGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 90 bp GACCTGGAGCTGAGAAACAGAGTGAAGTTGGACTGTGACGGGCACTaGGAAAGGCCTGAAGGTGAGAGACAGAAGTTTCTGGAAATAGGG +
Preference number: 1 (lower is better)
Translates to: DLELRNRVKLDCDGH*ERPEGERQKFLEIG
Trigger: CCCTATTTCCAGAAACTTCTGTCTCTCACCTTCAGGCCTTTCCCAGTGCCCGTCACAGTCCAACTTCACTCTGTTTCTCAGCTCCAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR TCA 90 bp CTCACGCCAAATGTGCCCCAACATGCCAAATCATGCAACATGACATaGTGTCACTCCAGGACAGTTTATGACATGCCACAGCTGTCTGGC +
Preference number: 1 (lower is better)
Translates to: LTPNVPQHAKSCNMT*CHSRTVYDMPQLSG
Trigger: GCCAGACAGCTGTGGCATGTCATAAACTGTCCTGGAGTGACATCATGTCATGTTGCATGATTTGGCATGTTGGGGCACATTTGGCGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR GCA 90 bp ACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATaGCAAATCATGCAACATGACATGATGTCACTCCAGGACAGTTTA +
Preference number: 1 (lower is better)
Translates to: TPMCTSFPHAKCAPT*QIMQHDMMSLQDSL
Trigger: TAAACTGTCCTGGAGTGACATCATGTCATGTTGCATGATTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR TCA 90 bp TGCCAAATCATGCAACATGACATGATGTCACTCCAGGACAGTTTATaGCATGCCACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAG +
Preference number: 1 (lower is better)
Translates to: CQIMQHDMMSLQDSL*HATAVWHVQTWLGK
Trigger: CTTACCCAGCCATGTCTGGACATGCCAGACAGCTGTGGCATGTCATAAACTGTCCTGGAGTGACATCATGTCATGTTGCATGATTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR GCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGCGCCAGGGCCTCCCTTaGGGCCACCAGGTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVRQGLP*GHQVLL
Trigger: CAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCG...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CAA 90 bp CAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTaGTGTCTTCTCCAGTCGGGGAAGAGCTGGGCCAGCCTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: QVRQGLPCGHQVLLN*CLLQSGKSWASLGP
Trigger: GGGACCCAGGCTGGCCCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CCTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAACCAGCCTGGAGCTCTaGCCGTTCCCACCGCAGCTG +
Preference number: 2 (lower is better)
Translates to: PSEPPVPAPCAETAAAPATSLEL*PFPPQL
Trigger: CAGCTGCGGTGGGAACGGGCAGAGCTCCAGGCTGGT...TGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR TCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTTCAGCTCGGCACTCTaGGACCGTCTGGCTCGCCCC +
Preference number: 2 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAFSSAL*DRLARP
Trigger: GGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAA...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR TCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTCGCCGAAGCAGGGGGTaGGCCAGGGAGAAGGAGTCC +
Preference number: 2 (lower is better)
Translates to: PESASRRASRTLYASSQCRRSRG*AREKES
Trigger: GGACTCCTTCTCCCTGGCTCACCCCCTGCTTCGGCG...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCCCTGGACACCCATGTaGACCAGCTTCCCTCACGCC +
Preference number: 2 (lower is better)
Translates to: GEALSSPHESLPGLRETGPWTPM*TSFPHA
Trigger: GGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGG...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCGGCAGCCTCCTCTTGTaGCAGCAGCCTCCATGCTTC +
Preference number: 2 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLGSLLL*QQPPCF
Trigger: GAAGCATGGAGGCTGCTGGCACAAGAGGAGGCTGCC...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCGTCCCCAGAATGGCCTaGACCATGGCTTCTGCACGG +
Preference number: 2 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLVPRMA*TMASAR
Trigger: CCGTGCAGAAGCCATGGTGCAGGCCATTCTGGGGAC...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGCTTCCTCGTCCCCGCTaGTGCCACCTCCGCTGCTAT +
Preference number: 2 (lower is better)
Translates to: DAASSWANFSGSQALPTWLPRPR*CHLRCY
Trigger: ATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGGAAG...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CCTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCACTTCCTCGTCCCCGCTaGTGCCACCTCCGCTGCTAT +
Preference number: 2 (lower is better)
Translates to: PSEPPVPAPCAETAAAPALPRPR*CHLRCY
Trigger: ATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGGAAG...TGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCCTGGCCACCATCAATaGCACTGGTGCCACCAGGGA +
Preference number: 2 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLPGHHQ*HWCHQG
Trigger: TCCCTGGTGGCACCAGTGGCATTGATGGTGGCCAGG...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGGACTGCAGCTGCTCCTaGAGGTCCAGTGTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVDCSCS*RSSVLV
Trigger: CACCAGGACACTGGACCTGCAGGAGCAGCTGCAGTC...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCAGAGCTGGGCCAGCCTaGGTCCCCAGAATGGCCTGC +
Preference number: 2 (lower is better)
Translates to: ARTRALWALHKSLFSSALRAGPA*VPRMAC
Trigger: GCAGGCCATTCTGGGGACCCAGGCTGGCCCAGCTCT...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCAAGATGCGTCTGGACTaGAGTGAAGGGCACAGACCA +
Preference number: 2 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVKMRLD*SEGHRP
Trigger: TGGTCTGTGCCCTTCACTCCAGTCCAGACGCATCTT...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTGGCAGCCTCCTCTTGTaGCAGCAGCCTCCATGCTTC +
Preference number: 2 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSGSLLL*QQPPCF
Trigger: GAAGCATGGAGGCTGCTGGCACAAGAGGAGGCTGCC...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCACCAGCCTGGAGCTCTaGCCGTTCCCACCGCAGCTG +
Preference number: 2 (lower is better)
Translates to: SCRSSVLVSDAASSWANFTSLEL*PFPPQL
Trigger: CAGCTGCGGTGGGAACGGGCAGAGCTCCAGGCTGGT...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCGCTGCCTTCAGGGCTTaGCTGTGGATTCTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLAAFRA*LWILLC
Trigger: GCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGC...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCATCTGGGTGCTGGAATaGCTGCGGAGGCGCCGAAGC +
Preference number: 2 (lower is better)
Translates to: ARTRALWALHKSLFSSALIWVLE*LRRRRS
Trigger: GCTTCGGCGCCTCCGCAGCCATTCCAGCACCCAGAT...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCTGTGGATTCTGCTGTaGTCCTGCATCCATGGCAGC +
Preference number: 2 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLLWILL*SCIHGS
Trigger: GCTGCCATGGATGCAGGAGCACAGCAGAATCCACAG...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGCTGCACCATGGCTTCTaGACGGGGCACAGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSLHHGF*TGHSGH
Trigger: ATGCCCACTGTGCCCCGTGCAGAAGCCATGGTGCAG...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp TCCTGTGGACACCAACTCAGGCACTTGAGTCACTCCATGCTGGGCAAGGAATTCCGCCAGGGCCTCCCTTaGGGCCACCAGGTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: SCGHQLRHLSHSMLGKEFRQGLP*GHQVLL
Trigger: CAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCG...GAATTCCTTGCCCAGCATGGAGTGACTCAAGTGCCTGAGTTGGTGTCCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGTGCTATGTCCGCCACTaGTGTTTGCCCCACCAGCCT +
Preference number: 2 (lower is better)
Translates to: DAASSWANFSGSQALPTWCYVRH*CLPHQP
Trigger: AGGCTGGTGGGGCAAACAGCAGTGGCGGACATAGCA...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCGACTGCAGCTGCTCCTaGAGGTCCAGTGTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSDCSCS*RSSVLV
Trigger: CACCAGGACACTGGACCTGCAGGAGCAGCTGCAGTC...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp TGCTTCCCAAGGGAACCTGCTCCCCCTTCGCTTGTGCCTTCGAACTCCATCGGCCCTGTTCCAGCTCCCTaGGCAGAGACTGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: CFPREPAPPSLVPSNSIGPVPAP*AETAAA
Trigger: AGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGG...GCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTCCGGGAGGCAGGGGTTaGTGTGAGCCGAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: PESASRRASRTLYASSQCPGGRG*CEPRLC
Trigger: GCACAATCTCGGCTCACAGCAACCCCTGCCTCCCGG...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCGCGATCTCGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: ARTRALWALHKSLFSSALAISAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCGC...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTTTCAGGGCTTGGCTGTaGATTCTGCTGTGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: PCSARHSETVWLAPSEPPFRAWL*ILLCSC
Trigger: GCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAA...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCACTGCACGGGGCACAGTaGGCATGGGTGCCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: TVSLYCRAASGAWWASTALHGAQ*AWVPRW
Trigger: CCACCTTGGCACCCATGCCCACTGTGCCCCGTGCAG...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCGAATGGCCTGCACCATaGCTTCTGCACGGGGCACAG +
Preference number: 2 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSEWPAP*LLHGAQ
Trigger: CTGTGCCCCGTGCAGAAGCCATGGTGCAGGCCATTC...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp GGGGGCACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCGGTCCCCCAAGTAGCTaGGATTACAGGCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: GGTVSLYCRAASGAWWASGPPSS*DYRLPP
Trigger: TGGTGGGAGCCTGTAATCCCAGCTACTTGGGGGACC...GGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CAA 90 bp GCTCGGCCCTGGGCAGGGAATTCTGAGGGCTTAAACTTCATGGTCTaGGGGAGGTGTGAGCGGAGCAGGGAGTTGGCAAGAGCTGCGTGT +
Preference number: 2 (lower is better)
Translates to: ARPWAGNSEGLNFMV*GRCERSRELARAAC
Trigger: ACACGCAGCTCTTGCCAACTCCCTGCTCCGCTCACACCTCCCCAAGACCATGAAGTTTAAGCCCTCAGAATTCCCTGCCCAGGGCCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR TCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGGCCACCAGGTCCTGCTaGATTTGTGTCTTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARATRSC*ICVFSS
Trigger: ACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGC...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCTCCCATAGCCCAGGTTaGTTCTGGCCTGACCCCACT +
Preference number: 2 (lower is better)
Translates to: RETGQLELQLWLCNLTDPSHSPG*FWPDPT
Trigger: AGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGA...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCTGCCAGCAGCCTCCATaGTTCCTTTTCAGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLCQQPP*FLFSCL
Trigger: CAAGCAGCTGAAAAGGAAGCATGGAGGCTGCTGGCA...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGTGCCAGCAGCCTCCATaGTTCCTTTTCAGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARCQQPP*FLFSCL
Trigger: CAAGCAGCTGAAAAGGAAGCATGGAGGCTGCTGGCA...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGCTTGGCTGTGGATTCTaGTGTGCTCCTGCATCCATG +
Preference number: 2 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARLGCGF*CAPASM
Trigger: CATGGATGCAGGAGCACAGCAGAATCCACAGCCAAG...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGCTGCACCATGGCTTCTaGACGGGGCACAGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKLHHGF*TGHSGH
Trigger: ATGCCCACTGTGCCCCGTGCAGAAGCCATGGTGCAG...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGTGCTGCCACCTCCGCTaGTATGTCCGCCACTGCTGT +
Preference number: 2 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQCCHLR*YVRHCC
Trigger: ACAGCAGTGGCGGACATAGCAGCGGAGGTGGCAGCA...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGCATCAATGCCACTGGTaGCACCAGGGACAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: DAASSWANFSGSQALPTWHQCHW*HQGQQE
Trigger: TTCCTGCTGTCCCTGGTGGCACCAGTGGCATTGATG...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGATTGTGCCACTGCACTaGACTACAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARIVPLH*TTAWVT
Trigger: TGTCACCCAGGCTGTAGTGCAGTGCAGTGGCACAAT...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCCCAGGGTTCCCTGTCTaGCTCAGAGCTGCTAGAACC +
Preference number: 2 (lower is better)
Translates to: ARTRALWALHKSLFSSALPGFPV*LRAART
Trigger: GGTTCTAGCAGCTCTGAGGCAGACAGGGAACCCTGG...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCATGCTCCCCCGGAGTTaGTCCATCTGGGCTTCCATG +
Preference number: 2 (lower is better)
Translates to: ARTRALWALHKSLFSSALMLPRS*SIWASM
Trigger: CATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCAT...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCCATGCCACAGCTGTCTaGCATGTCCAGACATGGCTG +
Preference number: 2 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPHATAV*HVQTWL
Trigger: CAGCCATGTCTGGACATGCCAGACAGCTGTGGCATG...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR CCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGCATGCCACAGCTGTCTaGCATGTCCAGACATGGCTG +
Preference number: 2 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQHATAV*HVQTWL
Trigger: CAGCCATGTCTGGACATGCCAGACAGCTGTGGCATG...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTGTGCTCCTGCATCCATaGCAGCCTCCTCTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAVLLHP*QPPLVP
Trigger: TGGCACAAGAGGAGGCTGCCATGGATGCAGGAGCAC...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp TTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTGAGTCGTCTTCCTGCTTCCGGTaGGCTCCTCGGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: FSAACRSLMGASSPAPESSSCFR*APRKAR
Trigger: CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGA...CGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGCGGAGTTGCTCCATCTaGGCTTCCATGATGTGCATC +
Preference number: 2 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVRSCSI*ASMMCI
Trigger: GATGCACATCATGGAAGCCCAGATGGAGCAACTCCG...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CAA 90 bp TCTGCCTCAGAGCTGCTAGAACCACTGCCTGAGCCACCTGCTTGGTaGTGGGAAAGATGTGGGCAGGGCTCCAGCCTCAAGAGGGAATCC +
Preference number: 2 (lower is better)
Translates to: SASELLEPLPEPPAW*WERCGQGSSLKRES
Trigger: GGATTCCCTCTTGAGGCTGGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTCTAGCAGCTCTGAGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CAA 90 bp TCCATCTGGGCTTCCATGATGTGCATCTCAGGACTGAGGGGCTGGTaGGGAAGAGACCCAAGGATCTGGGTGCTGGAATGGCTGCGGAGG +
Preference number: 2 (lower is better)
Translates to: SIWASMMCISGLRGW*GRDPRIWVLEWLRR
Trigger: CCTCCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCTTCCCAACCAGCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCAGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGTCCTTTTCAGCTGCTTaGAGGTCACTCATGGGGGCT +
Preference number: 2 (lower is better)
Translates to: DAASSWANFSGSQALPTWSFSAA*RSLMGA
Trigger: AGCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGA...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTCTTGGCTGTGGATTCTaGTGTGCTCCTGCATCCATG +
Preference number: 2 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSLGCGF*CAPASM
Trigger: CATGGATGCAGGAGCACAGCAGAATCCACAGCCAAG...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTGGGCTTATCCACACTaGTGCCTTCAGGGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAWAYPH*CLQGLA
Trigger: AGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGCCCA...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGCCGAGATTGTGCCACTaGACTGCACTACAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKPRLCH*TALQPG
Trigger: CCCAGGCTGTAGTGCAGTGCAGTGGCACAATCTCGG...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCTACTGCAAGGCCAGATaGAATGCTGTGGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: ARTRALWALHKSLFSSALYCKAR*NAVASA
Trigger: GGCTGAGGCCACAGCATTGCATCTGGCCTTGCAGTA...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTCATGCCACAGCTGTCTaGCATGTCCAGACATGGCTG +
Preference number: 2 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAHATAV*HVQTWL
Trigger: CAGCCATGTCTGGACATGCCAGACAGCTGTGGCATG...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCCACCCCATCAGGCCCTaGACACCCATGTGCACCAGC +
Preference number: 2 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASHPIRP*TPMCTS
Trigger: GCTGGTGCACATGGGTGTCCAGGGCCTGATGGGGTG...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR CCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCAGCCCAGGTTGCTTCTaGCCTGACCCCACTGATATG +
Preference number: 2 (lower is better)
Translates to: RETGQLELQLWLCNLTDPSPGCF*PDPTDM
Trigger: CATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR CCA 90 bp TGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACTCAGTCCCAGGGACCTaGTCCCATAGCCCAGGTTGC +
Preference number: 2 (lower is better)
Translates to: WASGDRPVGTSAVAMQPHSVPGT*SHSPGC
Trigger: GCAACCTGGGCTATGGGACCAGGTCCCTGGGACTGA...GTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR CCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGGCTGCCTTCAGGGCTTaGCTGTGGATTCTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQAAFRA*LWILLC
Trigger: GCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGC...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGGAAAGCCACTTCCTGTaGGGTGGGCTTATCCACACT +
Preference number: 2 (lower is better)
Translates to: DAASSWANFSGSQALPTWESHFL*GGLIHT
Trigger: AGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTC...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCGATGCTGCCAGTTCCTaGGCTAACTTCTCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: ARTRALWALHKSLFSSALDAASS*ANFSGS
Trigger: GGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGCCACCTGCTTGGTTGTaGGAAAGATGTGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQPPAWL*ERCGQG
Trigger: GCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGG...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR TCA 90 bp GGGCCAGGCTCTGAGAGAATCTTCATTAGAGAACGGCGCTCCTGGAGACGCTGGGCTATGGTAGGTGTGTaGGCAGAGCAGGCACATCAG +
Preference number: 2 (lower is better)
Translates to: GPGSERIFIRERRSWRRWAMVGV*AEQAHQ
Trigger: CTGATGTGCCTGCTCTGCTCACACACCTACCATAGC...CCAGCGTCTCCAGGAGCGCCGTTCTCTAATGAAGATTCTCTCAGAGCCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCTCCTTTTCAGCTGCTTaGAGGTCACTCATGGGGGCT +
Preference number: 2 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSSFSAA*RSLMGA
Trigger: AGCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGA...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCACTGTGGATTCTGCTGTaGTCCTGCATCCATGGCAGC +
Preference number: 2 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSLWILL*SCIHGS
Trigger: GCTGCCATGGATGCAGGAGCACAGCAGAATCCACAG...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGGCTTATCCACACTGCTaGCTTCAGGGCTTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWAYPHC*LQGLAV
Trigger: CACAGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGC...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCATGCTATGTCCGCCACTaGTGTTTGCCCCACCAGCCT +
Preference number: 2 (lower is better)
Translates to: TVSLYCRAASGAWWASTACYVRH*CLPHQP
Trigger: AGGCTGGTGGGGCAAACAGCAGTGGCGGACATAGCA...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTCTGAGCCTCCATGAGTaGCATCTGCTGCTCCAACTT +
Preference number: 2 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWALSLHE*HLLLQL
Trigger: AAGTTGGAGCAGCAGATGGCACTCATGGAGGCTCAG...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTCTGAGGCCAGTTCCCTaGCAGAGCCCCCATCCATCT +
Preference number: 2 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCLRPVP*QSPHPS
Trigger: AGATGGATGGGGGCTCTGGCAGGGAACTGGCCTCAG...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCGAAAGCCACTTCCTGTaGGGTGGGCTTATCCACACT +
Preference number: 2 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSESHFL*GGLIHT
Trigger: AGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTC...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCAGGGTTTCACCATGTTaGCTAGGCTGGTGTCAAACT +
Preference number: 2 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLRVSPC*LGWCQT
Trigger: AGTTTGACACCAGCCTAGCCAACATGGTGAAACCCT...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CAA 90 bp ACATTCCACTTGGTGCCAGGCCAAAGACACCTGAGTCTTTCTTCATaGCCTGGCCACACCCCATCAGGCCCTGGACACCCATGTGCACCA +
Preference number: 2 (lower is better)
Translates to: TFHLVPGQRHLSLSS*PGHTPSGPGHPCAP
Trigger: TGGTGCACATGGGTGTCCAGGGCCTGATGGGGTGTGGCCAGGCAATGAAGAAAGACTCAGGTGTCTTTGGCCTGGCACCAAGTGGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CAA 90 bp GCCTCCCGCTGGCCTAGCTGCATGCTGAGGCCTTCACAGCGGCCCTaGTATCCCTGTAGCACAGCTGATAGCAGACGATTAAAGCATTTG +
Preference number: 2 (lower is better)
Translates to: ASRWPSCMLRPSQRP*YPCSTADSRRLKHL
Trigger: CAAATGCTTTAATCGTCTGCTATCAGCTGTGCTACAGGGATACAAGGGCCGCTGTGAAGGCCTCAGCATGCAGCTAGGCCAGCGGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR TCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGCTCCAGGACAGTTTATaGCATGCCACAGCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQLQDSL*HATAVW
Trigger: CCAGACAGCTGTGGCATGTCATAAACTGTCCTGGAG...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR TCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCCTGACCCCACTGATATaGAGTTCACATTCCACTTGG +
Preference number: 2 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSLTPLI*SSHSTW
Trigger: CCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAG...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR GCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTGCTTCCTTTTCAGCTaGTTGCAGGTCACTCATGGG +
Preference number: 2 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWACFLFS*LQVTHG
Trigger: CCCATGAGTGACCTGCAAGCAGCTGAAAAGGAAGCA...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTGGGCGCTGTGGGCTTTaGATAAATCCCTGTTCAGCT +
Preference number: 2 (lower is better)
Translates to: PESASRRASRTLYASSQCGRCGL*INPCSA
Trigger: AGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCC...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTATGTCCAGACATGGCTaGGTAAGGGGCCTACAGAAA +
Preference number: 2 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAMSRHG*VRGLQK
Trigger: TTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACAT...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTAGCGGAGCAGGGAGTTaGCAAGAGCTGCGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCSGAGS*QELRVL
Trigger: CAGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCT...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR GCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTGCTTATCCACACTGCTaGCTTCAGGGCTTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCAYPHC*LQGLAV
Trigger: CACAGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGC...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCATGTGGATGGCAAAGATaGGTCTGGACTGGAGTGAAG +
Preference number: 2 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSCGWQR*VWTGVK
Trigger: CTTCACTCCAGTCCAGACGCATCTTTGCCATCCACA...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGTTCAGGGCTTGGCTGTaGATTCTGCTGTGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKFRAWL*ILLCSC
Trigger: GCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAA...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCTGGCAAAGATGCGTCTaGACTGGAGTGAAGGGCACA +
Preference number: 2 (lower is better)
Translates to: TLDIASELESHFLWGGLIWQRCV*TGVKGT
Trigger: TGTGCCCTTCACTCCAGTCCAGACGCATCTTTGCCA...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGCAGCAGATCTGTGGATaGCAAAGATGCGTCTGGACT +
Preference number: 2 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWQQICG*QRCVWT
Trigger: AGTCCAGACGCATCTTTGCCATCCACAGATCTGCTG...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR TCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTGCCACCAGGTCCTGCTaGATTTGTGTCTTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCATRSC*ICVFSS
Trigger: ACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGC...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCAAGCAGAACCCTGTATaGCTCTTCACAGTGTTCACT +
Preference number: 2 (lower is better)
Translates to: ARTRALWALHKSLFSSALKQNPV*LFTVFT
Trigger: AGTGAACACTGTGAAGAGGCATACAGGGTTCTGCTT...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR GCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCTGCTTCCTTTTCAGCTaGTTGCAGGTCACTCATGGG +
Preference number: 2 (lower is better)
Translates to: TLDIASELESHFLWGGLICFLFS*LQVTHG
Trigger: CCCATGAGTGACCTGCAAGCAGCTGAAAAGGAAGCA...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR TCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAACTCCAGGACAGTTTATaGCATGCCACAGCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQLQDSL*HATAVW
Trigger: CCAGACAGCTGTGGCATGTCATAAACTGTCCTGGAG...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR TCA 90 bp TGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACTCATGCAACATGACATaGTGTCACTCCAGGACAGTT +
Preference number: 2 (lower is better)
Translates to: WASGDRPVGTSAVAMQPHSCNMT*CHSRTV
Trigger: AACTGTCCTGGAGTGACATCATGTCATGTTGCATGA...GTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR GCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGAAATGTGCCCCAACATaGCAAATCATGCAACATGAC +
Preference number: 2 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKKCAPT*QIMQHD
Trigger: GTCATGTTGCATGATTTGGCATGTTGGGGCACATTT...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR GCA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGCCCTCACGCCAAATGTaGCCCAACATGCCAAATCAT +
Preference number: 2 (lower is better)
Translates to: FALIARARSCCWRDLGSLPSRQM*PNMPNH
Trigger: ATGATTTGGCATGTTGGGGCACATTTGGCGTGAGGG...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR CCA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGAGTTCACATTCCACTTaGTGCCAGGCCAAAGACACC +
Preference number: 2 (lower is better)
Translates to: FALIARARSCCWRDLGSLSSHST*CQAKDT
Trigger: GGTGTCTTTGGCCTGGCACCAAGTGGAATGTGAACT...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR CCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTTTCTTGTCAGTCCTGTaGACACCAACTCAGGCACTT +
Preference number: 2 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCFLSVL*TPTQAL
Trigger: AAGTGCCTGAGTTGGTGTCCACAGGACTGACAAGAA...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR TCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCCCAAATCATGCAACATaGCATGATGTCACTCCAGGA +
Preference number: 2 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASPNHAT*HDVTPG
Trigger: TCCTGGAGTGACATCATGTCATGTTGCATGATTTGG...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR GCA 72 bp CAGCCGGAGCCAGGCATTCCTCTCGGCCAGGCGAGCTaGCTCTCGCTGGCAGCTCCCTGCCCCTTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: QPEPGIPLGQAS*LSLAAPCPFLL
Trigger: AAGCAGGAAGGGGCAGGGAGCTGCCAGCGAGAGGCAGCTCGCCTGGCCGAGAGGAATGCCTGGCTCCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CAA 90 bp GGGGGCACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCCCGCCAGGGCCTCCCTaGCGGCCACCAGGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: GGTVSLYCRAASGAWWASPPGPP*RPPGPA
Trigger: AGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGG...GGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CCA 72 bp TGCTCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTaGGCTCCTCGGAAGGCCAGGACCAGGGCGCTGTGG +
Preference number: 3 (lower is better)
Translates to: CSNFRRCSSCFR*APRKARTRALW
Trigger: CCACAGCGCCCTGGTCCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 72 bp GGGGCTGGTTGGGAAGAGACCCAAGGATCTGGGTGCTaGAATGGCTGCGGAGGCGCCGAAGCAGGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: GAGWEETQGSGC*NGCGGAEAGGE
Trigger: CTCACCCCCTGCTTCGGCGCCTCCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCTTCCCAACCAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 72 bp TGGGAAGAGACCCAAGGATCTGGGTGCTGGAATGGCTaGGGAGGCGCCGAAGCAGGGGGTGAGCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: WEETQGSGCWNG*GGAEAGGEPGR
Trigger: TCTCCCTGGCTCACCCCCTGCTTCGGCGCCTCCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCTTCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CCA 72 bp GAATGGCCTGCACCATGGCTTCTGCACGGGGCACAGTaGGCATGGGTGCCAAGGTGGGGCCAGGCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: EWPAPWLLHGAQ*AWVPRWGQALR
Trigger: TCTCAGAGCCTGGCCCCACCTTGGCACCCATGCCCACTGTGCCCCGTGCAGAAGCCATGGTGCAGGCCATTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 72 bp GGACTGAGGGGCTGGTTGGGAAGAGACCCAAGGATCTaGGTGCTGGAATGGCTGCGGAGGCGCCGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: GLRGWLGRDPRI*VLEWLRRRRSR
Trigger: CCTGCTTCGGCGCCTCCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCTTCCCAACCAGCCCCTCAGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CAA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCTTCCTTTTCAGCTGCTaGCAGGTCACTCATGGGGGC +
Preference number: 3 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVFLFSC*QVTHGG
Trigger: GCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGAA...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR TCA 72 bp TCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTaGATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: SARASLAATRSC*ICVFSSRGRAG
Trigger: CCCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 72 bp GCCTGGCCACACCCCATCAGGCCCTGGACACCCATGTaGACCAGCTTCCCTCACGCCAAATGTGCCCCAACA +
Preference number: 3 (lower is better)
Translates to: AWPHPIRPWTPM*TSFPHAKCAPT
Trigger: TGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATGGGGTGTGGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR GCA 72 bp CAGGAAGGCCCTGATACCACTCTTCCTCGTCCCCGCTaGTGCCACCTCCGCTGCTATGTCCGCCACTGCTGT +
Preference number: 3 (lower is better)
Translates to: QEGPDTTLPRPR*CHLRCYVRHCC
Trigger: ACAGCAGTGGCGGACATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGGAAGAGTGGTATCAGGGCCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 72 bp CCTGCTTCCCAAGGGAACCTGCTCCCCCTTCGCTTGTaGCTTCGAACTCCATCGGCCCAGAATGGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: PASQGNLLPLRL*LRTPSAQNGWG
Trigger: CCCCCAGCCATTCTGGGCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 72 bp TGCAATGCTGTGGCCTCAGCCTCCCGCTGGCCTAGCTaGATGCTGAGGCCTTCACAGCGGCCCTTGTATCCC +
Preference number: 3 (lower is better)
Translates to: CNAVASASRWPS*MLRPSQRPLYP
Trigger: GGGATACAAGGGCCGCTGTGAAGGCCTCAGCATGCAGCTAGGCCAGCGGGAGGCTGAGGCCACAGCATTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CAA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGCATGGCAGCCTCCTCTaGTGCCAGCAGCCTCCATGC +
Preference number: 3 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSHGSLL*CQQPPC
Trigger: GCATGGAGGCTGCTGGCACAAGAGGAGGCTGCCATG...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 72 bp TCCATGAGTGCCATCTGCTGCTCCAACTTCCGGCGTTaGTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCC +
Preference number: 3 (lower is better)
Translates to: SMSAICCSNFRR*SSCFRWAPRKA
Trigger: GGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGAGCAGCAGATGGCACTCATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR-3UTR CAA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGTGCTGCCTTCAGGGCTaGGCTGTGGATTCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQCCLQG*AVDSAV
Trigger: CACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR TCA 72 bp TTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTaGGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTA +
Preference number: 3 (lower is better)
Translates to: LQVTHGGFVSCS*VGLPQSKQNPV
Trigger: TACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 72 bp GTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTaGGCTTCCACTGCAGGTTTGTGGGGCACTTCGGGG +
Preference number: 3 (lower is better)
Translates to: VSLYCRAASGAW*ASTAGLWGTSG
Trigger: CCCCGAAGTGCCCCACAAACCTGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CAA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTAGGCAGGAGAATCACTaGAACTGGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWARQENH*NWGGGG
Trigger: ACCTCCGCCTCCCCAGTTCAAGTGATTCTCCTGCCT...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 72 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATaGAACCTCACGGACCCCCGAAATGCGTCAGTCCCA +
Preference number: 3 (lower is better)
Translates to: RETGQLELQLWL*NLTDPRNASVP
Trigger: TGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR GCA 72 bp CTCCCCCGGAGTTGCTCCATCTGGGCTTCCATGATGTaGATCTCAGGACTGAGGGGCTGGTTGGGAAGAGAC +
Preference number: 3 (lower is better)
Translates to: LPRSCSIWASMM*ISGLRGWLGRD
Trigger: GTCTCTTCCCAACCAGCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCAGATGGAGCAACTCCGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CCA 72 bp GGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTaGCTATGCAACCTCACGGACCCCCGAAATGCGTCA +
Preference number: 3 (lower is better)
Translates to: GLRETGQLELQL*LCNLTDPRNAS
Trigger: TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 72 bp CTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTaGGCCAGCCTGGGTCCCCAGAATGGCCTGCACCAT +
Preference number: 3 (lower is better)
Translates to: LLNLCLLQSGKS*ASLGPQNGLHH
Trigger: ATGGTGCAGGCCATTCTGGGGACCCAGGCTGGCCCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 72 bp ATAAATCCCTGTTCAGCTCGGCACTCTGAGACCGTCTaGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: INPCSARHSETV*LAPSEPPVPAP
Trigger: GGGAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGGATTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 72 bp TCAGAGCTGCTAGAACCACTGCCTGAGCCACCTGCTTaGTTGTGGGAAAGATGTGGGCAGGGCTCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: SELLEPLPEPPA*LWERCGQGSSL
Trigger: GAGGCTGGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTCTAGCAGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CAA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCACTCCAACTTCCGGCGTaGCTCTTCCTGCTTCCGGTG +
Preference number: 3 (lower is better)
Translates to: TVSLYCRAASGAWWASTALQLPA*LFLLPV
Trigger: CACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGAG...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CAA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGTTAAACTTCATGGTCTaGGGGAGGTGTGAGCGGAGC +
Preference number: 3 (lower is better)
Translates to: DAASSWANFSGSQALPTWLNFMV*GRCERS
Trigger: GCTCCGCTCACACCTCCCCAAGACCATGAAGTTTAA...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 72 bp GCGTCAGTCCCAGGGACCTGGTCCCATAGCCCAGGTTaGTTCTGGCCTGACCCCACTGATATGAAGTTCACA +
Preference number: 3 (lower is better)
Translates to: ASVPGTWSHSPG*FWPDPTDMKFT
Trigger: TGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCCTGGGACTGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR GCA 72 bp TCCACACTGCTGCCTTCAGGGCTTGGCTGTGGATTCTaGTGTGCTCCTGCATCCATGGCAGCCTCCTCTTGT +
Preference number: 3 (lower is better)
Translates to: STLLPSGLGCGF*CAPASMAASSC
Trigger: ACAAGAGGAGGCTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCAGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CCA 72 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTaGTGGGCTTCCACTGCAGGTTTGTGGGGCACTTCG +
Preference number: 3 (lower is better)
Translates to: TVSLYCRAASGA*WASTAGLWGTS
Trigger: CGAAGTGCCCCACAAACCTGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR-3UTR CAA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTTCCTTTTCAGCTGCTaGCAGGTCACTCATGGGGGC +
Preference number: 3 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHFLFSC*QVTHGG
Trigger: GCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGAA...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR GCA 72 bp CTGCAACCCCCGCCTCTCAGGTTCAAGCAATTATCCTaGCTCAGTCTCCCGAGTAGCCGGGATTACAGGCAT +
Preference number: 3 (lower is better)
Translates to: LQPPPLRFKQLS*LSLPSSRDYRH
Trigger: ATGCCTGTAATCCCGGCTACTCGGGAGACTGAGGCAGGATAATTGCTTGAACCTGAGAGGCGGGGGTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 72 bp GTCCCAGGGACCTGGTCCCATAGCCCAGGTTGCTTCTaGCCTGACCCCACTGATATGAAGTTCACATTCCAC +
Preference number: 3 (lower is better)
Translates to: VPGTWSHSPGCF*PDPTDMKFTFH
Trigger: GTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 72 bp AGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTaGCGCGATCTCGGTTCACTGCAACCCCCGCCTCTC +
Preference number: 3 (lower is better)
Translates to: SFALIARARSCC*RDLGSLQPPPL
Trigger: GAGAGGCGGGGGTTGCAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 72 bp TGGGCTTCCATGATGTGCATCTCAGGACTGAGGGGCTaGTTGGGAAGAGACCCAAGGATCTGGGTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: WASMMCISGLRG*LGRDPRIWVLE
Trigger: TTCCAGCACCCAGATCCTTGGGTCTCTTCCCAACCAGCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CCA 72 bp TTGAGCTTCTCAATGCTCCCCCGGAGTTGCTCCATCTaGGCTTCCATGATGTGCATCTCAGGACTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: LSFSMLPRSCSI*ASMMCISGLRG
Trigger: GCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCATTGAGAAGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 72 bp GGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTaGAACCCCCGCCTCTCAGGTTCAAGCAATTATCCT +
Preference number: 3 (lower is better)
Translates to: GHDLVVGAISVH*NPRLSGSSNYP
Trigger: AGGATAATTGCTTGAACCTGAGAGGCGGGGGTTGCAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR-3UTR CAA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAAAGTTCACATTCCACTaGGTGCCAGGCCAAAGACAC +
Preference number: 3 (lower is better)
Translates to: QLELQLWLCNLTDPRNASKFTFH*VPGQRH
Trigger: GTGTCTTTGGCCTGGCACCAAGTGGAATGTGAACTT...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR TCA 72 bp ATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATaGAGTTCACATTCCACTTGGTGCCAGGCCAAAGAC +
Preference number: 3 (lower is better)
Translates to: IAQVASGLTPLI*SSHSTWCQAKD
Trigger: GTCTTTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CCA 72 bp AGCAGAACCCTGTATGCCTCTTCACAGTGTTCACTGTaGGACACTGGTTCTGAGTGCTTCAGGACACTCAGC +
Preference number: 3 (lower is better)
Translates to: SRTLYASSQCSL*DTGSECFRTLS
Trigger: GCTGAGTGTCCTGAAGCACTCAGAACCAGTGTCCCACAGTGAACACTGTGAAGAGGCATACAGGGTTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR GCA 72 bp TGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATaGCAAATCATGCAACATGACATGATGTCACTCCAG +
Preference number: 3 (lower is better)
Translates to: CTSFPHAKCAPT*QIMQHDMMSLQ
Trigger: CTGGAGTGACATCATGTCATGTTGCATGATTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCCTCGTCCCCGCTGCTaGCACCTCCGCTGCTATGTC +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVPRPRC*HLRCYV
Trigger: GACATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGG...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCGGCTTCGGGGCCGCGTaGCCCGGGCACTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLGFGAA*PGHSLL
Trigger: CAGCAATGAGTGCCCGGGCCACGCGGCCCCGAAGCC...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCTCTTCCTGCTTCCGGTaGGCTCCTCGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVSSCFR*APRKAR
Trigger: CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGA...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGGGGCACTTCGGGGGCTaGGGCCAGTTCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVGHFGG*GQFPAR
Trigger: TCTGGCAGGGAACTGGCCTCAGCCCCCGAAGTGCCC...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTTCCATGGGGCCCAGCTaGTCCAGCCCGGAGCTCACC +
Preference number: 4 (lower is better)
Translates to: PCSARHSETVWLAPSEPPSMGPS*SSPELT
Trigger: GGTGAGCTCCGGGCTGGAGCAGCTGGGCCCCATGGA...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCCTCGGCCAGGCGAGCTaGCTCTCGCTGGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSLGQAS*LSLAAP
Trigger: GGGAGCTGCCAGCGAGAGGCAGCTCGCCTGGCCGAG...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGCTCGGCCAGGCGAGCTaGCTCTCGCTGGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQLGQAS*LSLAAP
Trigger: GGGAGCTGCCAGCGAGAGGCAGCTCGCCTGGCCGAG...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGGGTGCTGGAATGGCTaGGGAGGCGCCGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PCSARHSETVWLAPSEPPGCWNG*GGAEAG
Trigger: CCCTGCTTCGGCGCCTCCGCAGCCATTCCAGCACCC...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCGAATGGCCTGCACCATaGCTTCTGCACGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVEWPAP*LLHGAQ
Trigger: CTGTGCCCCGTGCAGAAGCCATGGTGCAGGCCATTC...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCACTCTGAGACCGTCTaGCTCGCCCCTTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVHSETV*LAPSEP
Trigger: TGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTG...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTCGGCTGGGTGCAATaGCCCTCACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVLGWVQ*PSPVVP
Trigger: TGGGACTACAGGTGAGGGCCATTGCACCCAGCCGAG...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCGGGCACTTCGGGGGCTaGGGCCAGTTCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GEALSSPHESLPGLRETGGHFGG*GQFPAR
Trigger: TCTGGCAGGGAACTGGCCTCAGCCCCCGAAGTGCCC...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGTCACCGGGTGGAGCATaGCTCCCTCGCCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQSPGGA*LPRRLR
Trigger: CCGAAGCCGGCGAGGGAGGCATGCTCCACCCGGTGA...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGTGTGAGCGGAGCAGGGAGTTGGCAAGAGCTGCGTGTTCTGGGACTGGCATCCTCACCGGGTGGAGCATaGCTCCCTCGCCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GVSGAGSWQELRVLGLASSPGGA*LPRRLR
Trigger: CCGAAGCCGGCGAGGGAGGCATGCTCCACCCGGTGA...GGATGCCAGTCCCAGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCTCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCTGGTGGCGCCAGGCTaGAGCCGCTGCCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PWTPMCTSFPHAKCAPTCLVAPG*SRCLQG
Trigger: TCCCTGGAGGCAGCGGCTGCAGCCTGGCGCCACCAG...GCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGCTGGTGGCGCCAGGCTaGAGCCGCTGCCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSLVAPG*SRCLQG
Trigger: TCCCTGGAGGCAGCGGCTGCAGCCTGGCGCCACCAG...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGGGGTGCTGGAATGGCTaGGGAGGCGCCGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DAASSWANFSGSQALPTWGCWNG*GGAEAG
Trigger: CCCTGCTTCGGCGCCTCCGCAGCCATTCCAGCACCC...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGCTTCCCCAGGGCCCTTaGAGTGGCTTCGAGCACCGC +
Preference number: 4 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARLPQGP*SGFEHR
Trigger: GCGGTGCTCGAAGCCACTGCAAGGGCCCTGGGGAAG...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCGGCTTCGGGGCCGCGTaGCCCGGGCACTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPGFGAA*PGHSLL
Trigger: CAGCAATGAGTGCCCGGGCCACGCGGCCCCGAAGCC...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGCCTTCTCAGCTCGGATaGCCTCCAGGGAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVPSQLG*PPGRPA
Trigger: CGCAGGCCTCCCTGGAGGCCATCCGAGCTGAGAAGG...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCAGAGACCCAAGGATCTaGGTGCTGGAATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVRDPRI*VLEWLR
Trigger: CCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCT...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGGCCTCAGCCTCCCGCTaGCCTAGCTGCATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVASASR*PSCMLR
Trigger: CCTCAGCATGCAGCTAGGCCAGCGGGAGGCTGAGGC...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCTGCACGGGGCACAGTaGGCATGGGTGCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLLHGAQ*AWVPRW
Trigger: CCACCTTGGCACCCATGCCCACTGTGCCCCGTGCAG...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCTAGGCCTTGGCCACTaGCCTCCTCCATGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GEALSSPHESLPGLRETGLGLGH*PPPWGP
Trigger: TGGGCCCCATGGAGGAGGTCAGTGGCCAAGGCCTAG...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp CCTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACGCCGAAGCAGGGGGTaGGCCAGGGAGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PAPESASRRASRTLYASSRRSRG*AREKES
Trigger: GGACTCCTTCTCCCTGGCTCACCCCCTGCTTCGGCG...TGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGACCTCCTCGGCCTGCTaGGCCTCCATGAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARTSSAC*ASMSAI
Trigger: GATGGCACTCATGGAGGCTCAGCAGGCCGAGGAGGT...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCTCCATGGGGCCCAGCTaGTCCAGCCCGGAGCTCACC +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPSMGPS*SSPELT
Trigger: GGTGAGCTCCGGGCTGGAGCAGCTGGGCCCCATGGA...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCTCCATGGGGCCCAGCTaGTCCAGCCCGGAGCTCACC +
Preference number: 4 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSSMGPS*SSPELT
Trigger: GGTGAGCTCCGGGCTGGAGCAGCTGGGCCCCATGGA...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGCTGGTGGCGCCAGGCTaGAGCCGCTGCCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWLVAPG*SRCLQG
Trigger: TCCCTGGAGGCAGCGGCTGCAGCCTGGCGCCACCAG...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGCGCCAGGGCCTCCCTTaGGGCCACCAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKRQGLP*GHQVLL
Trigger: CAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCG...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCCGCCAGGGCCTCCCTTaGGGCCACCAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SCRSSVLVSDAASSWANFRQGLP*GHQVLL
Trigger: CAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCG...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGCCTCGTCCCCGCTGCTaGCACCTCCGCTGCTATGTC +
Preference number: 4 (lower is better)
Translates to: DAASSWANFSGSQALPTWPRPRC*HLRCYV
Trigger: GACATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGG...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGTCCCTGCGCAGAGACTaGAGCTGCTCCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARSLRRD*SCSCRS
Trigger: GGACCTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGA...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGTTGCCCAGCCTGGAGTaGAGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARLPSLE*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCACTCCAGGCTGGGCAA...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGGGCTTCGGGGCCGCGTaGCCCGGGCACTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQGFGAA*PGHSLL
Trigger: CAGCAATGAGTGCCCGGGCCACGCGGCCCCGAAGCC...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGTCGGCCCAGAATGGCTaGGGGGCTGGTGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWSAQNG*GAGGAR
Trigger: CCTGGCGCCACCAGCCCCCCAGCCATTCTGGGCCGA...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGCCTTCTCAGCTCGGATaGCCTCCAGGGAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: DAASSWANFSGSQALPTWPSQLG*PPGRPA
Trigger: CGCAGGCCTCCCTGGAGGCCATCCGAGCTGAGAAGG...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGATCTGGGTGCTGGAATaGCTGCGGAGGCGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARIWVLE*LRRRRS
Trigger: GCTTCGGCGCCTCCGCAGCCATTCCAGCACCCAGAT...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGCAGTCGGGGAAGAGCTaGGCCAGCCTGGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSQSGKS*ASLGPQ
Trigger: CTGGGGACCCAGGCTGGCCCAGCTCTTCCCCGACTG...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCGATGCTGCCAGTTCCTaGGCTAACTTCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVDAASS*ANFSGS
Trigger: GGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTCCAGGGCCCTTGCAGTaGCTTCGAGCACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSPGPLQ*LRAPPP
Trigger: AGGTGGCGGTGCTCGAAGCCACTGCAAGGGCCCTGG...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
3UTR CAA 72 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTaGTGTCTTCTCCAGTCGGGGAAGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QGLPCGHQVLLN*CLLQSGKSWAS
Trigger: GCTGGCCCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACCTAGGCCTTGGCCACTaGCCTCCTCCATGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHLGLGH*PPPWGP
Trigger: TGGGCCCCATGGAGGAGGTCAGTGGCCAAGGCCTAG...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGGTGTGCTGGAGGGTCTaGAACACATCGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQVCWRV*NTSGAP
Trigger: TGGGGCCCCCGATGTGTTTCAGACCCTCCAGCACAC...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCGGCCTAGCTGCATGCTaGGGCCTTCACAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ARTRALWALHKSLFSSALGLAAC*GLHSGP
Trigger: AGGGCCGCTGTGAAGGCCTCAGCATGCAGCTAGGCC...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTGGCCTAGCTGCATGCTaGGGCCTTCACAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAGLAAC*GLHSGP
Trigger: AGGGCCGCTGTGAAGGCCTCAGCATGCAGCTAGGCC...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGGGTCCAGTGTCCTGGTaGGCGATGCTGCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVGPVSW*AMLPVP
Trigger: AGGAACTGGCAGCATCGCTCACCAGGACACTGGACC...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCGGTCCAGTGTCCTGGTaGGCGATGCTGCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLGPVSW*AMLPVP
Trigger: AGGAACTGGCAGCATCGCTCACCAGGACACTGGACC...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACCTGGCTCGCCCCTTCTaGGCCACCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHLARPF*ATCSSS
Trigger: GGAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAG...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGCTGAGGCCAGTTCCCTaGCAGAGCCCCCATCCATCT +
Preference number: 4 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVLRPVP*QSPHPS
Trigger: AGATGGATGGGGGCTCTGGCAGGGAACTGGCCTCAG...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CCTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACCAGGCTGCAGCCGCTaGCTCCAGGGAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PAPESASRRASRTLYASSPGCSR*LQGAQS
Trigger: ACTCTGAGCTCCCTGGAGGCAGCGGCTGCAGCCTGG...TGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGCTTCCCAAGGGAACCTaGTCCCCCTTCGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARLPKGT*SPFACA
Trigger: GGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAG...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCTCGGCCAGGCGAGCTaGCTCTCGCTGGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLILGQAS*LSLAAP
Trigger: GGGAGCTGCCAGCGAGAGGCAGCTCGCCTGGCCGAG...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCACCCAAGGATCTGGGTaGTGGAATGGCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLTQGSG*WNGCGG
Trigger: GCCTCCGCAGCCATTCCAGCACCCAGATCCTTGGGT...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCTGCACCATGGCTTCTaGACGGGGCACAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLLHHGF*TGHSGH
Trigger: ATGCCCACTGTGCCCCGTGCAGAAGCCATGGTGCAG...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTACCAGCCTGGAGCTCTaGCCGTTCCCACCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWATSLEL*PFPPQL
Trigger: CAGCTGCGGTGGGAACGGGCAGAGCTCCAGGCTGGT...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCTTCCCAAGGGAACCTGCTCCCCCTTCGCTTGTGCCTTCGAACTCCATCGGCACCAGCCTGGAGCTCTaGCCGTTCCCACCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CFPREPAPPSLVPSNSIGTSLEL*PFPPQL
Trigger: CAGCTGCGGTGGGAACGGGCAGAGCTCCAGGCTGGT...GCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCGCAGAGACTGCAGCTaGTCCTGCAGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLRRDCS*SCRSSV
Trigger: GACACTGGACCTGCAGGAGCAGCTGCAGTCTCTGCG...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCCCTGCGCAGAGACTaGAGCTGCTCCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSSLRRD*SCSCRS
Trigger: GGACCTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGA...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGAGCCTCCATGAGTaGCATCTGCTGCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVLSLHE*HLLLQL
Trigger: AAGTTGGAGCAGCAGATGGCACTCATGGAGGCTCAG...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTTGGGGAGGCGGAGGTTaGAGTGAGCCAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: PCSARHSETVWLAPSEPPWGGGG*SEPRWH
Trigger: GTGCCATCTTGGCTCACTGCAACCTCCGCCTCCCCA...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGATCCAGTTCACCGGGTaGAGCATGCCTCCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQIQFTG*SMPPSP
Trigger: CGGCGAGGGAGGCATGCTCCACCCGGTGAACTGGAT...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTGCTTGGAGCTCCCACTaGCTGCCTCGACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSAWSSH*LPRPPL
Trigger: CAGAGGAGGTCGAGGCAGCCAGTGGGAGCTCCAAGC...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCCAAGGATCTGGGTGCTaGAATGGCTGCGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPQGSGC*NGCGGA
Trigger: GGCGCCTCCGCAGCCATTCCAGCACCCAGATCCTTG...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CCTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCACAAGGATCTGGGTGCTaGAATGGCTGCGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PSEPPVPAPCAETAAAPAQGSGC*NGCGGA
Trigger: GGCGCCTCCGCAGCCATTCCAGCACCCAGATCCTTG...TGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTGCCTCAGCCTCCCGCTaGCCTAGCTGCATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAASASR*PSCMLR
Trigger: CCTCAGCATGCAGCTAGGCCAGCGGGAGGCTGAGGC...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCCTGCACGGGGCACAGTaGGCATGGGTGCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARTRALWALHKSLFSSALLHGAQ*AWVPRW
Trigger: CCACCTTGGCACCCATGCCCACTGTGCCCCGTGCAG...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCAGAGCTGGGCCAGCCTaGGTCCCCAGAATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSRAGPA*VPRMAC
Trigger: GCAGGCCATTCTGGGGACCCAGGCTGGCCCAGCTCT...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGTCTTCCTGCTTCCGGTaGGCTCCTCGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQSSCFR*APRKAR
Trigger: CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGA...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGTGCCTCGACCTCCTCTaGACTCTCAGCCACGGGATC +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQCLDLL*TLSHGI
Trigger: GATCCCGTGGCTGAGAGTTCAGAGGAGGTCGAGGCA...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACGTGTGCTGGAGGGTCTaGAACACATCGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHVCWRV*NTSGAP
Trigger: TGGGGCCCCCGATGTGTTTCAGACCCTCCAGCACAC...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGGGCCTAGCTGCATGCTaGGGCCTTCACAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKGLAAC*GLHSGP
Trigger: AGGGCCGCTGTGAAGGCCTCAGCATGCAGCTAGGCC...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp AGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGTTCAGCTCGGCACTCTaGGACCGTCTGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SPHESLPGLRETGQLELQFSSAL*DRLARP
Trigger: GGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAA...CTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCACCTCCTCGGCCTGCTaGGCCTCCATGAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSTSSAC*ASMSAI
Trigger: GATGGCACTCATGGAGGCTCAGCAGGCCGAGGAGGT...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACGCGTCTGGACTGGAGTaGAGGGCACAGACCAAGCGG +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHASGLE*RAQTKR
Trigger: CCGCTTGGTCTGTGCCCTTCACTCCAGTCCAGACGC...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCACTGGCATCCCAGGGTaGGACTGGGAGGCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLTGIPG*DWEAVN
Trigger: ATTCACAGCCTCCCAGTCTCACCCTGGGATGCCAGT...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTACTCCTGACCTCAGGTaGTCCGCCCAACTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWATPDLR*SAQLGL
Trigger: GAGGCCGAGTTGGGCGGATCACCTGAGGTCAGGAGT...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CCTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCACTGAGGCCAGTTCCCTaGCAGAGCCCCCATCCATCT +
Preference number: 4 (lower is better)
Translates to: PSEPPVPAPCAETAAAPALRPVP*QSPHPS
Trigger: AGATGGATGGGGGCTCTGGCAGGGAACTGGCCTCAG...TGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGCCAGGCTGCAGCCGCTaGCTCCAGGGAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQPGCSR*LQGAQS
Trigger: ACTCTGAGCTCCCTGGAGGCAGCGGCTGCAGCCTGG...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCCTCCCCCTTCGCTTGTaGCTTCGAACTCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPLPLRL*LRTPSA
Trigger: GGCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAG...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTCTCCCCCTTCGCTTGTaGCTTCGAACTCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSLPLRL*LRTPSA
Trigger: GGCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAG...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp AGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCCAGGGAGGCCTGCGTaGGGACCAGCTCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: SPHESLPGLRETGQLELQPGRPA*GPAHPL
Trigger: GAGAGGATGAGCTGGTCCGCACGCAGGCCTCCCTGG...CTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCACCAGGGAGGCCTGCGTaGGGACCAGCTCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSPGRPA*GPAHPL
Trigger: GAGAGGATGAGCTGGTCCGCACGCAGGCCTCCCTGG...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGTGTGAGCGGAGCAGGGAGTTGGCAAGAGCTGCGTGTTCTGGGACTGGCATCCTCCCGCTGGCCTAGCTaGATGCTGAGGCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GVSGAGSWQELRVLGLASSRWPS*MLRPSQ
Trigger: CTGTGAAGGCCTCAGCATGCAGCTAGGCCAGCGGGA...GGATGCCAGTCCCAGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCTCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACTCACGCCGCACCAGCTaGAGCCGAAGCATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHSRRTS*SRSIRS
Trigger: GGACCTGATGCTTCGGCTGCAGCTGGTGCGGCGTGA...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGTGTGAGCGGAGCAGGGAGTTGGCAAGAGCTGCGTGTTCTGGGACTGGCATCCTGCTGCCACCTCCGCTaGTATGTCCGCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: GVSGAGSWQELRVLGLASCCHLR*YVRHCC
Trigger: ACAGCAGTGGCGGACATAGCAGCGGAGGTGGCAGCA...GGATGCCAGTCCCAGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCTCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGCTTCCTCGTCCCCGCTaGTGCCACCTCCGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSLPRPR*CHLRCY
Trigger: ATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGGAAG...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCCTGGCCACCATCAATaGCACTGGTGCCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: GEALSSPHESLPGLRETGPGHHQ*HWCHQG
Trigger: TCCCTGGTGGCACCAGTGGCATTGATGGTGGCCAGG...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGTGTGAGCGGAGCAGGGAGTTGGCAAGAGCTGCGTGTTCTGGGACTGGCATCCGACTGCAGCTGCTCCTaGAGGTCCAGTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GVSGAGSWQELRVLGLASDCSCS*RSSVLV
Trigger: CACCAGGACACTGGACCTGCAGGAGCAGCTGCAGTC...GGATGCCAGTCCCAGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCTCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCACTTCCCCAGGGCCCTTaGAGTGGCTTCGAGCACCGC +
Preference number: 4 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSLPQGP*SGFEHR
Trigger: GCGGTGCTCGAAGCCACTGCAAGGGCCCTGGGGAAG...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGTGGGGAGGCGGAGGTTaGAGTGAGCCAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQWGGGG*SEPRWH
Trigger: GTGCCATCTTGGCTCACTGCAACCTCCGCCTCCCCA...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCTGTGGATGGCAAAGATaGGTCTGGACTGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVCGWQR*VWTGVK
Trigger: CTTCACTCCAGTCCAGACGCATCTTTGCCATCCACA...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCCGAGATTGTGCCACTaGACTGCACTACAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLPRLCH*TALQPG
Trigger: CCCAGGCTGTAGTGCAGTGCAGTGGCACAATCTCGG...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCGGAGCTCACCGGAGGTaGGGCAAAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPGAHRR*GKAGLG
Trigger: TCCAAGCCCAGCTTTGCCCCACCTCCGGTGAGCTCC...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTGGAGCTCACCGGAGGTaGGGCAAAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAGAHRR*GKAGLG
Trigger: TCCAAGCCCAGCTTTGCCCCACCTCCGGTGAGCTCC...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGGCTGCTTCTGGGGCTTaGTGGGCTTCCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQAASGA*WASTAG
Trigger: ACCTGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGC...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCGAATGGCCTGCACCATaGCTTCTGCACGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSEWPAP*LLHGAQ
Trigger: CTGTGCCCCGTGCAGAAGCCATGGTGCAGGCCATTC...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCCTGGGTCCCCAGAATaGCCTGCACCATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GEALSSPHESLPGLRETGPGSPE*PAPWLL
Trigger: CAGAAGCCATGGTGCAGGCCATTCTGGGGACCCAGG...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCAAGAGCTGGGCCAGCCTaGGTCCCCAGAATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSRAGPA*VPRMAC
Trigger: GCAGGCCATTCTGGGGACCCAGGCTGGCCCAGCTCT...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACCAGTCGGGGAAGAGCTaGGCCAGCCTGGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHQSGKS*ASLGPQ
Trigger: CTGGGGACCCAGGCTGGCCCAGCTCTTCCCCGACTG...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTCCAGGGCCCTTGCAGTaGCTTCGAGCACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCPGPLQ*LRAPPP
Trigger: AGGTGGCGGTGCTCGAAGCCACTGCAAGGGCCCTGG...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACCCAGCATCTCCCTaGGAAGGGGCTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPNPASP*EGAARR
Trigger: TCTCCTGGCAGCCCCTTCCCAGGGAGATGCTGGGTT...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCTAGGCCTTGGCCACTaGCCTCCTCCATGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLILGLGH*PPPWGP
Trigger: TGGGCCCCATGGAGGAGGTCAGTGGCCAAGGCCTAG...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGGGGCACTTCGGGGGCTaGGGCCAGTTCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKGHFGG*GQFPAR
Trigger: TCTGGCAGGGAACTGGCCTCAGCCCCCGAAGTGCCC...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp AGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGGTGTGCTGGAGGGTCTaGAACACATCGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPHESLPGLRETGQLELQVCWRV*NTSGAP
Trigger: TGGGGCCCCCGATGTGTTTCAGACCCTCCAGCACAC...CTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGGCTAGAACCACTGCCTaGGCCACCTGCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQARTTA*ATCLVV
Trigger: CACAACCAAGCAGGTGGCTCAGGCAGTGGTTCTAGC...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp GGGGGCACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCGCTAGAACCACTGCCTaGGCCACCTGCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: GGTVSLYCRAASGAWWASARTTA*ATCLVV
Trigger: CACAACCAAGCAGGTGGCTCAGGCAGTGGTTCTAGC...GGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCACGCCGAAGCAGGGGGTaGGCCAGGGAGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QLELQLWLCNLTDPRNASRRSRG*AREKES
Trigger: GGACTCCTTCTCCCTGGCTCACCCCCTGCTTCGGCG...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCGGTCCAGTGTCCTGGTaGGCGATGCTGCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPGPVSW*AMLPVP
Trigger: AGGAACTGGCAGCATCGCTCACCAGGACACTGGACC...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCACTGGCTCGCCCCTTCTaGGCCACCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TVSLYCRAASGAWWASTALARPF*ATCSSS
Trigger: GGAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAG...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCTTCAGCTCGGCACTCTaGGACCGTCTGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLIFSSAL*DRLARP
Trigger: GGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAA...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CCTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCAAGGCGGAGGTTGCAGTaGGCCAAGATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PAPESASRRASRTLYASSRRRLQ*AKMAPL
Trigger: CAGTGGTGCCATCTTGGCTCACTGCAACCTCCGCCT...TGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CCTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAAGTGAAGTTGGACTGTaGCGGGCACTGGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PSEPPVPAPCAETAAAPASEVGL*RALGKA
Trigger: GGCCTTTCCCAGTGCCCGTCACAGTCCAACTTCACT...TGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTGGGACACTGGTTCTaGGTGCTTCAGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: PCSARHSETVWLAPSEPPVGHWF*VLQDTQ
Trigger: CTGAGTGTCCTGAAGCACTCAGAACCAGTGTCCCAC...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGGGTGCTGGAATGGCTaGGGAGGCGCCGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLELQLWLCNLTDPRNASGCWNG*GGAEAG
Trigger: CCCTGCTTCGGCGCCTCCGCAGCCATTCCAGCACCC...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTACCCAAGGATCTGGGTaGTGGAATGGCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWATQGSG*WNGCGG
Trigger: GCCTCCGCAGCCATTCCAGCACCCAGATCCTTGGGT...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCTCCCGCTGGCCTAGCTaGATGCTGAGGCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPSRWPS*MLRPSQ
Trigger: CTGTGAAGGCCTCAGCATGCAGCTAGGCCAGCGGGA...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCGGCAGCCTCCTCTTGTaGCAGCAGCCTCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPGSLLL*QQPPCF
Trigger: GAAGCATGGAGGCTGCTGGCACAAGAGGAGGCTGCC...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCGTCCCCAGAATGGCCTaGACCATGGCTTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPVPRMA*TMASAR
Trigger: CCGTGCAGAAGCCATGGTGCAGGCCATTCTGGGGAC...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCGTCCCCAGAATGGCCTaGACCATGGCTTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: ARTRALWALHKSLFSSALVPRMA*TMASAR
Trigger: CCGTGCAGAAGCCATGGTGCAGGCCATTCTGGGGAC...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCTGCTATGTCCGCCACTaGTGTTTGCCCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: GEALSSPHESLPGLRETGCYVRH*CLPHQP
Trigger: AGGCTGGTGGGGCAAACAGCAGTGGCGGACATAGCA...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTGCTATGTCCGCCACTaGTGTTTGCCCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSCYVRH*CLPHQP
Trigger: AGGCTGGTGGGGCAAACAGCAGTGGCGGACATAGCA...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCCCTGGCCACCATCAATaGCACTGGTGCCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: ARTRALWALHKSLFSSALPGHHQ*HWCHQG
Trigger: TCCCTGGTGGCACCAGTGGCATTGATGGTGGCCAGG...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCCCTGGCCACCATCAATaGCACTGGTGCCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSPGHHQ*HWCHQG
Trigger: TCCCTGGTGGCACCAGTGGCATTGATGGTGGCCAGG...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCGACTGCAGCTGCTCCTaGAGGTCCAGTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARTRALWALHKSLFSSALDCSCS*RSSVLV
Trigger: CACCAGGACACTGGACCTGCAGGAGCAGCTGCAGTC...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACCGCAGAGACTGCAGCTaGTCCTGCAGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHRRDCS*SCRSSV
Trigger: GACACTGGACCTGCAGGAGCAGCTGCAGTCTCTGCG...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCACCGGGAGGCAGGGGTTaGTGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSPGGRG*CEPRLC
Trigger: GCACAATCTCGGCTCACAGCAACCCCTGCCTCCCGG...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp AGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGATCCAGTTCACCGGGTaGAGCATGCCTCCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SPHESLPGLRETGQLELQIQFTG*SMPPSP
Trigger: CGGCGAGGGAGGCATGCTCCACCCGGTGAACTGGAT...CTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCGCTTGGAGCTCCCACTaGCTGCCTCGACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SCRSSVLVSDAASSWANFAWSSH*LPRPPL
Trigger: CAGAGGAGGTCGAGGCAGCCAGTGGGAGCTCCAAGC...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGGAGGTGGGGCAAAGCTaGGCTTGGAGCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKEVGQS*AWSSHW
Trigger: CCAGTGGGAGCTCCAAGCCCAGCTTTGCCCCACCTC...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGGAGGTGGGGCAAAGCTaGGCTTGGAGCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWEVGQS*AWSSHW
Trigger: CCAGTGGGAGCTCCAAGCCCAGCTTTGCCCCACCTC...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGGCTTCTGGGGCTTGGTaGGCTTCCACTGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: DAASSWANFSGSQALPTWASGAW*ASTAGL
Trigger: CAAACCTGCAGTGGAAGCCCACCAAGCCCCAGAAGC...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGTGTGAGCGGAGCAGGGAGTTGGCAAGAGCTGCGTGTTCTGGGACTGGCATCCCCACCTGCTTGGTTGTaGGAAAGATGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GVSGAGSWQELRVLGLASPPAWL*ERCGQG
Trigger: GCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGG...GGATGCCAGTCCCAGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCTCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCCAAGGATCTGGGTGCTaGAATGGCTGCGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: SCRSSVLVSDAASSWANFQGSGC*NGCGGA
Trigger: GGCGCCTCCGCAGCCATTCCAGCACCCAGATCCTTG...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGGGGCACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCGTGCTCCTGCATCCATaGCAGCCTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGTVSLYCRAASGAWWASVLLHP*QPPLVP
Trigger: TGGCACAAGAGGAGGCTGCCATGGATGCAGGAGCAC...GGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCTTCCCAAGGGAACCTGCTCCCCCTTCGCTTGTGCCTTCGAACTCCATCGGCGAATGGCCTGCACCATaGCTTCTGCACGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: CFPREPAPPSLVPSNSIGEWPAP*LLHGAQ
Trigger: CTGTGCCCCGTGCAGAAGCCATGGTGCAGGCCATTC...GCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CCTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACCTGGGTCCCCAGAATaGCCTGCACCATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PAPESASRRASRTLYASSPGSPE*PAPWLL
Trigger: CAGAAGCCATGGTGCAGGCCATTCTGGGGACCCAGG...TGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTAGGACCAGGGCGCTGTaGGCTTTGCATAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: PCSARHSETVWLAPSEPPRTRAL*ALHKSL
Trigger: CAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCT...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGTGTGAGCGGAGCAGGGAGTTGGCAAGAGCTGCGTGTTCTGGGACTGGCATCCAGCGGAGCAGGGAGTTaGCAAGAGCTGCGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GVSGAGSWQELRVLGLASSGAGS*QELRVL
Trigger: CAGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCT...GGATGCCAGTCCCAGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCTCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCTCGTCAACCCCTCTCTaGTCCTCTGGGGGTAACTTG +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSSSTPL*SSGGNL
Trigger: CAAGTTACCCCCAGAGGATCAGAGAGGGGTTGACGA...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTTGCCTCGACCTCCTCTaGACTCTCAGCCACGGGATC +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCCLDLL*TLSHGI
Trigger: GATCCCGTGGCTGAGAGTTCAGAGGAGGTCGAGGCA...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTAGGGAGAAGGAGTCCTaGGTCTCCCAGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCREKES*VSQGSL
Trigger: CAGGGAACCCTGGGAGACTCAGGACTCCTTCTCCCT...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCACTGGCTCGCCCCTTCTaGGCCACCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QLELQLWLCNLTDPRNASLARPF*ATCSSS
Trigger: GGAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAG...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTCCTGCTGAGCCTCCATaGGTGCCATCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCPAEPP*VPSAAP
Trigger: TGGAGCAGCAGATGGCACTCATGGAGGCTCAGCAGG...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCCCTGCTGAGCCTCCATaGGTGCCATCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SCRSSVLVSDAASSWANFPAEPP*VPSAAP
Trigger: TGGAGCAGCAGATGGCACTCATGGAGGCTCAGCAGG...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCTCCAGGACAGTTTATaGCATGCCACAGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLLQDSL*HATAVW
Trigger: CCAGACAGCTGTGGCATGTCATAAACTGTCCTGGAG...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCCCAGTGCCCTCTGAATaGTTCTCCTTCGTCAACCCC +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSPVPSE*FSFVNP
Trigger: GGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGG...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAAGGCCCGGGCACTCATTaGTGTCCAGAAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKGPGTH*CPEASA
Trigger: GGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCC...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCGGCCCGGGCACTCATTaGTGTCCAGAAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLIGPGTH*CPEASA
Trigger: GGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCC...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCACCAGGCTGCAGCCGCTaGCTCCAGGGAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: QLELQLWLCNLTDPRNASPGCSR*LQGAQS
Trigger: ACTCTGAGCTCCCTGGAGGCAGCGGCTGCAGCCTGG...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCTGGGCTTCCATGATGTaGATCTCAGGACTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSWASMM*ISGLRG
Trigger: GCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCA...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCTACTGCAAGGCCAGATaGAATGCTGTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPYCKAR*NAVASA
Trigger: GGCTGAGGCCACAGCATTGCATCTGGCCTTGCAGTA...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCCTTTTCAGCTGCTTaGAGGTCACTCATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVSFSAA*RSLMGA
Trigger: AGCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGA...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGGGCAGCCTCCTCTTGTaGCAGCAGCCTCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQGSLLL*QQPPCF
Trigger: GAAGCATGGAGGCTGCTGGCACAAGAGGAGGCTGCC...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCTGTGGATTCTGCTGTaGTCCTGCATCCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GEALSSPHESLPGLRETGLWILL*SCIHGS
Trigger: GCTGCCATGGATGCAGGAGCACAGCAGAATCCACAG...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGCTGCACCATGGCTTCTaGACGGGGCACAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKLHHGF*TGHSGH
Trigger: ATGCCCACTGTGCCCCGTGCAGAAGCCATGGTGCAG...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGGTCCCCAGAATGGCCTaGACCATGGCTTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWVPRMA*TMASAR
Trigger: CCGTGCAGAAGCCATGGTGCAGGCCATTCTGGGGAC...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp AGAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCGCCAGGGCCTCCCTTaGGGCCACCAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RVLLLLPGHDLVVGAISVRQGLP*GHQVLL
Trigger: CAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCG...AACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp AACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGTCACGCCGCACCAGCTaGAGCCGAAGCATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NFSCGYATSRTPEMRQSQSRRTS*SRSIRS
Trigger: GGACCTGATGCTTCGGCTGCAGCTGGTGCGGCGTGA...CTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGTGCTGCCACCTCCGCTaGTATGTCCGCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKCCHLR*YVRHCC
Trigger: ACAGCAGTGGCGGACATAGCAGCGGAGGTGGCAGCA...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCCATCAATGCCACTGGTaGCACCAGGGACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPHQCHW*HQGQQE
Trigger: TTCCTGCTGTCCCTGGTGGCACCAGTGGCATTGATG...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAATCCCTGCGCAGAGACTaGAGCTGCTCCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKSLRRD*SCSCRS
Trigger: GGACCTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGA...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGGCCAGGCTCTGAGAGAATCTTCATTAGAGAACGGCGCTCCTGGAGACGCTGGCCTGTTCCAGCTCCCTaGGCAGAGACTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPGSERIFIRERRSWRRWPVPAP*AETAAA
Trigger: AGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGG...CCAGCGTCTCCAGGAGCGCCGTTCTCTAATGAAGATTCTCTCAGAGCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGGGGCGCTGTGGGCTTTaGATAAATCCCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVGRCGL*INPCSA
Trigger: AGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCC...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp AACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGCACGGACCCCCGAAATaGGTCAGTCCCAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: NFSCGYATSRTPEMRQSQHGPPK*VSPRDL
Trigger: CAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTG...CTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTATTGTGCCACTGCACTaGACTACAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: PCSARHSETVWLAPSEPPIVPLH*TTAWVT
Trigger: TGTCACCCAGGCTGTAGTGCAGTGCAGTGGCACAAT...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGGCGATCTCGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWAISAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCGC...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTTGAGGTGGGGCAAAGCTaGGCTTGGAGCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LSRPPAEQAEPCMPLHSVEVGQS*AWSSHW
Trigger: CCAGTGGGAGCTCCAAGCCCAGCTTTGCCCCACCTC...AACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCAGGAGCTCACCGGAGGTaGGGCAAAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: TVSLYCRAASGAWWASTAGAHRR*GKAGLG
Trigger: TCCAAGCCCAGCTTTGCCCCACCTCCGGTGAGCTCC...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGTCCACTGCAGGTTTGTaGGGCACTTCGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKSTAGL*GTSGAE
Trigger: CTCAGCCCCCGAAGTGCCCCACAAACCTGCAGTGGA...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGGCTGCTTCTGGGGCTTaGTGGGCTTCCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQAASGA*WASTAG
Trigger: ACCTGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGC...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp AGAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTTCGGCCCAGAATGGCTaGGGGGCTGGTGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVLLLLPGHDLVVGAISVSAQNG*GAGGAR
Trigger: CCTGGCGCCACCAGCCCCCCAGCCATTCTGGGCCGA...AACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCCACCTGCTTGGTTGTaGGAAAGATGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPPPAWL*ERCGQG
Trigger: GCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGG...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCCCTGAGCCACCTGCTTaGTTGTGGGAAAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPPEPPA*LWERCG
Trigger: CCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGG...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTGAGTCGATCTGGGTGCTGGAATaGCTGCGGAGGCGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: FSAACRSLMGASSPAPESIWVLE*LRRRRS
Trigger: GCTTCGGCGCCTCCGCAGCCATTCCAGCACCCAGAT...CGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCGCCTCAGCCTCCCGCTaGCCTAGCTGCATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASASASR*PSCMLR
Trigger: CCTCAGCATGCAGCTAGGCCAGCGGGAGGCTGAGGC...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGTTCAGGGCTTGGCTGTaGATTCTGCTGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DAASSWANFSGSQALPTWFRAWL*ILLCSC
Trigger: GCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAA...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGGCCAGGCTCTGAGAGAATCTTCATTAGAGAACGGCGCTCCTGGAGACGCTGGCCTGGGTCCCCAGAATaGCCTGCACCATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GPGSERIFIRERRSWRRWPGSPE*PAPWLL
Trigger: CAGAAGCCATGGTGCAGGCCATTCTGGGGACCCAGG...CCAGCGTCTCCAGGAGCGCCGTTCTCTAATGAAGATTCTCTCAGAGCCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGCACTCTGAGACCGTCTaGCTCGCCCCTTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKHSETV*LAPSEP
Trigger: TGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTG...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCCACTCTGAGACCGTCTaGCTCGCCCCTTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SCRSSVLVSDAASSWANFHSETV*LAPSEP
Trigger: TGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTG...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAATCTTCCTGCTTCCGGTaGGCTCCTCGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKSSCFR*APRKAR
Trigger: CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGA...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCACCAGGGCCCTTGCAGTaGCTTCGAGCACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: QLELQLWLCNLTDPRNASPGPLQ*LRAPPP
Trigger: AGGTGGCGGTGCTCGAAGCCACTGCAAGGGCCCTGG...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGTGGCATGTCCAGACATaGCTGGGTAAGGGGCCTACA +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQWHVQT*LGKGPT
Trigger: TGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCA...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGACTGTGACGGGCACTaGGAAAGGCCTGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSDCDGH*ERPEGE
Trigger: CTCACCTTCAGGCCTTTCCCAGTGCCCGTCACAGTC...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGTCGTCAACCCCTCTCTaGTCCTCTGGGGGTAACTTG +
Preference number: 4 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSSSTPL*SSGGNL
Trigger: CAAGTTACCCCCAGAGGATCAGAGAGGGGTTGACGA...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp AACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGAGGGAGAAGGAGTCCTaGGTCTCCCAGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: NFSCGYATSRTPEMRQSQREKES*VSQGSL
Trigger: CAGGGAACCCTGGGAGACTCAGGACTCCTTCTCCCT...CTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTGCCACCAGGTCCTGCTaGATTTGTGTCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSATRSC*ICVFSS
Trigger: ACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGC...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CCTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCACTCCAGGACAGTTTATaGCATGCCACAGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PSEPPVPAPCAETAAAPALQDSL*HATAVW
Trigger: CCAGACAGCTGTGGCATGTCATAAACTGTCCTGGAG...TGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACAGGCGGAGGTTGCAGTaGGCCAAGATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHRRRLQ*AKMAPL
Trigger: CAGTGGTGCCATCTTGGCTCACTGCAACCTCCGCCT...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGCTATGGTAGGTGTGTaGGCAGAGCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSAMVGV*AEQAHQ
Trigger: CTGATGTGCCTGCTCTGCTCACACACCTACCATAGC...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACACCAACTCAGGCACTTaGGTCACTCCATGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHTNSGT*VTPCWA
Trigger: TGCCCAGCATGGAGTGACTCAAGTGCCTGAGTTGGT...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACCCAGTGCCCTCTGAATaGTTCTCCTTCGTCAACCCC +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHPVPSE*FSFVNP
Trigger: GGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGG...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGTCACCGGGTGGAGCATaGCTCCCTCGCCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLSPGGA*LPRRLR
Trigger: CCGAAGCCGGCGAGGGAGGCATGCTCCACCCGGTGA...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCTTGGTGGGCTTCCACTaGAGGTTTGTGGGGCACTTC +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPLVGFH*RFVGHF
Trigger: GAAGTGCCCCACAAACCTGCAGTGGAAGCCCACCAA...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCTTGGTGGGCTTCCACTaGAGGTTTGTGGGGCACTTC +
Preference number: 4 (lower is better)
Translates to: ARTRALWALHKSLFSSALLVGFH*RFVGHF
Trigger: GAAGTGCCCCACAAACCTGCAGTGGAAGCCCACCAA...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCTTGGTGGGCTTCCACTaGAGGTTTGTGGGGCACTTC +
Preference number: 4 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSLVGFH*RFVGHF
Trigger: GAAGTGCCCCACAAACCTGCAGTGGAAGCCCACCAA...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCTCCCCCTTCGCTTGTaGCTTCGAACTCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLILPLRL*LRTPSA
Trigger: GGCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAG...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGCCAGGGTTCCCTGTCTaGCTCAGAGCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKPGFPV*LRAART
Trigger: GGTTCTAGCAGCTCTGAGGCAGACAGGGAACCCTGG...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCTTCCCAAGGGAACCTGCTCCCCCTTCGCTTGTGCCTTCGAACTCCATCGGCTGGGCTTCCATGATGTaGATCTCAGGACTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CFPREPAPPSLVPSNSIGWASMM*ISGLRG
Trigger: GCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCA...GCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGATGCTCCCCCGGAGTTaGTCCATCTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKMLPRS*SIWASM
Trigger: CATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCAT...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGATGCTCCCCCGGAGTTaGTCCATCTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQMLPRS*SIWASM
Trigger: CATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCAT...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCATGCTCCCCCGGAGTTaGTCCATCTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: SCRSSVLVSDAASSWANFMLPRS*SIWASM
Trigger: CATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCAT...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTCCCGCTGGCCTAGCTaGATGCTGAGGCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHSRWPS*MLRPSQ
Trigger: CTGTGAAGGCCTCAGCATGCAGCTAGGCCAGCGGGA...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGTCCTTTTCAGCTGCTTaGAGGTCACTCATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQSFSAA*RSLMGA
Trigger: AGCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGA...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTTGGCAGCCTCCTCTTGTaGCAGCAGCCTCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: LSRPPAEQAEPCMPLHSVGSLLL*QQPPCF
Trigger: GAAGCATGGAGGCTGCTGGCACAAGAGGAGGCTGCC...AACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAATGCTGCCACCTCCGCTaGTATGTCCGCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKCCHLR*YVRHCC
Trigger: ACAGCAGTGGCGGACATAGCAGCGGAGGTGGCAGCA...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCCTTCCTCGTCCCCGCTaGTGCCACCTCCGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASLPRPR*CHLRCY
Trigger: ATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGGAAG...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACCCTGTTCCAGCTCCCTaGGCAGAGACTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHPVPAP*AETAAA
Trigger: AGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGG...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCGGGCGCTGTGGGCTTTaGATAAATCCCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPGRCGL*INPCSA
Trigger: AGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCC...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGCTTCCCCAGGGCCCTTaGAGTGGCTTCGAGCACCGC +
Preference number: 4 (lower is better)
Translates to: FALIARARSCCWRDLGSLLPQGP*SGFEHR
Trigger: GCGGTGCTCGAAGCCACTGCAAGGGCCCTGGGGAAG...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCCCCTGGACACCCATGTaGACCAGCTTCCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASPWTPM*TSFPHA
Trigger: GGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGG...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCGTGATCTCAGCTCACTaGAACCTCCACTTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSVISAH*NLHFPS
Trigger: GCTTGGGAAGTGGAGGTTGCAGTGAGCTGAGATCAC...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAATCCACTGCAGGTTTGTaGGGCACTTCGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKSTAGL*GTSGAE
Trigger: CTCAGCCCCCGAAGTGCCCCACAAACCTGCAGTGGA...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCATCCACTGCAGGTTTGTaGGGCACTTCGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TVSLYCRAASGAWWASTASTAGL*GTSGAE
Trigger: CTCAGCCCCCGAAGTGCCCCACAAACCTGCAGTGGA...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTGCTTCTGGGGCTTGGTaGGCTTCCACTGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCASGAW*ASTAGL
Trigger: CAAACCTGCAGTGGAAGCCCACCAAGCCCCAGAAGC...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCCCACCTGCTTGGTTGTaGGAAAGATGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SCRSSVLVSDAASSWANFPPAWL*ERCGQG
Trigger: GCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGG...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGAGAGACCCAAGGATCTaGGTGCTGGAATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKRDPRI*VLEWLR
Trigger: CCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCT...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGCGGAGTTGCTCCATCTaGGCTTCCATGATGTGCATC +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQRSCSI*ASMMCI
Trigger: GATGCACATCATGGAAGCCCAGATGGAGCAACTCCG...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCGTGCTCCTGCATCCATaGCAGCCTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SCRSSVLVSDAASSWANFVLLHP*QPPLVP
Trigger: TGGCACAAGAGGAGGCTGCCATGGATGCAGGAGCAC...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCTTCCCAAGGGAACCTGCTCCCCCTTCGCTTGTGCCTTCGAACTCCATCGGCTTCAGGGCTTGGCTGTaGATTCTGCTGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CFPREPAPPSLVPSNSIGFRAWL*ILLCSC
Trigger: GCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAA...GCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTGCTGCCTTCAGGGCTTaGCTGTGGATTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCAAFRA*LWILLC
Trigger: GCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGC...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGCTGCACGGGGCACAGTaGGCATGGGTGCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FALIARARSCCWRDLGSLLHGAQ*AWVPRW
Trigger: CCACCTTGGCACCCATGCCCACTGTGCCCCGTGCAG...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAACAGTCGGGGAAGAGCTaGGCCAGCCTGGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQQSGKS*ASLGPQ
Trigger: CTGGGGACCCAGGCTGGCCCAGCTCTTCCCCGACTG...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCACCATGCTCGGCCCTaGGCAGGGAATTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKHHARP*AGNSEG
Trigger: GCCCTCAGAATTCCCTGCCCAGGGCCGAGCATGGTG...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGGGTCCCCCAAGTAGCTaGGATTACAGGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKGPPSS*DYRLPP
Trigger: TGGTGGGAGCCTGTAATCCCAGCTACTTGGGGGACC...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCGAAGCCAGTGCCCTCTaGATGCTTCTCCTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPEASAL*MLLLRQ
Trigger: TTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTC...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCGAAGCCAGTGCCCTCTaGATGCTTCTCCTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: ARTRALWALHKSLFSSALEASAL*MLLLRQ
Trigger: TTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTC...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCATGCCTCGACCTCCTCTaGACTCTCAGCCACGGGATC +
Preference number: 4 (lower is better)
Translates to: QLELQLWLCNLTDPRNASCLDLL*TLSHGI
Trigger: GATCCCGTGGCTGAGAGTTCAGAGGAGGTCGAGGCA...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACGAATCCTGCAGCTCTTaGACCTCTTTCTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHESCSS*TSFCSV
Trigger: GACGCTGCAGAAAGAGGTTCAAGAGCTGCAGGATTC...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp AACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGCTAGAACCACTGCCTaGGCCACCTGCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: NFSCGYATSRTPEMRQSQARTTA*ATCLVV
Trigger: CACAACCAAGCAGGTGGCTCAGGCAGTGGTTCTAGC...CTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTAGGGAGAAGGAGTCCTaGGTCTCCCAGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCREKES*VSQGSL
Trigger: CAGGGAACCCTGGGAGACTCAGGACTCCTTCTCCCT...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCGCCACCAGGTCCTGCTaGATTTGTGTCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RETGQLELQLWLCNLTDPATRSC*ICVFSS
Trigger: ACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGC...GGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGACCTCCTCGGCCTGCTaGGCCTCCATGAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: FALIARARSCCWRDLGSLTSSAC*ASMSAI
Trigger: GATGGCACTCATGGAGGCTCAGCAGGCCGAGGAGGT...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTCTTCCCAAGGGAACCTaGTCCCCCTTCGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCLPKGT*SPFACA
Trigger: GGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAG...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAACCAGGGTTCCCTGTCTaGCTCAGAGCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKPGFPV*LRAART
Trigger: GGTTCTAGCAGCTCTGAGGCAGACAGGGAACCCTGG...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCCAGGGTTCCCTGTCTaGCTCAGAGCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLIPGFPV*LRAART
Trigger: GGTTCTAGCAGCTCTGAGGCAGACAGGGAACCCTGG...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCACCCAAGGATCTGGGTaGTGGAATGGCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASTQGSG*WNGCGG
Trigger: GCCTCCGCAGCCATTCCAGCACCCAGATCCTTGGGT...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGTGGGCTTCCATGATGTaGATCTCAGGACTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKWASMM*ISGLRG
Trigger: GCCCCTCAGTCCTGAGATGCACATCATGGAAGCCCA...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCCTTGGCTGTGGATTCTaGTGTGCTCCTGCATCCATG +
Preference number: 4 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSLGCGF*CAPASM
Trigger: CATGGATGCAGGAGCACAGCAGAATCCACAGCCAAG...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGTGGGCTTATCCACACTaGTGCCTTCAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWWAYPH*CLQGLA
Trigger: AGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGCCCA...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGTGGGCTTATCCACACTaGTGCCTTCAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQWAYPH*CLQGLA
Trigger: AGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGCCCA...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTCTGCACCATGGCTTCTaGACGGGGCACAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCLHHGF*TGHSGH
Trigger: ATGCCCACTGTGCCCCGTGCAGAAGCCATGGTGCAG...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCCTGTGGACACCAACTCAGGCACTTGAGTCACTCCATGCTGGGCAAGGAATTCTCACGCCGCACCAGCTaGAGCCGAAGCATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SCGHQLRHLSHSMLGKEFSRRTS*SRSIRS
Trigger: GGACCTGATGCTTCGGCTGCAGCTGGTGCGGCGTGA...GAATTCCTTGCCCAGCATGGAGTGACTCAAGTGCCTGAGTTGGTGTCCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGACCAGCCTGGAGCTCTaGCCGTTCCCACCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLTSLEL*PFPPQL
Trigger: CAGCTGCGGTGGGAACGGGCAGAGCTCCAGGCTGGT...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTATGTCCGCCACTaGTGTTTGCCCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHCYVRH*CLPHQP
Trigger: AGGCTGGTGGGGCAAACAGCAGTGGCGGACATAGCA...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAACCTCGTCCCCGCTGCTaGCACCTCCGCTGCTATGTC +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQPRPRC*HLRCYV
Trigger: GACATAGCAGCGGAGGTGGCAGCAGCGGGGACGAGG...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGCATCAATGCCACTGGTaGCACCAGGGACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQHQCHW*HQGQQE
Trigger: TTCCTGCTGTCCCTGGTGGCACCAGTGGCATTGATG...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCCGCAGAGACTGCAGCTaGTCCTGCAGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASRRDCS*SCRSSV
Trigger: GACACTGGACCTGCAGGAGCAGCTGCAGTCTCTGCG...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAATCCCATAGCCCAGGTTaGTTCTGGCCTGACCCCACT +
Preference number: 4 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKSHSPG*FWPDPT
Trigger: AGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGA...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCCCTTCAGGAAAATCTaGCAGCCAAACCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GEALSSPHESLPGLRETGPFRKI*QPNPAS
Trigger: AGATGCTGGGTTTGGCTGGCAGATTTTCCTGAAGGG...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCAAGCGGGTCTTACCTaGTTCCTAGGCCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLIQAGLT*FLGLGH
Trigger: GTGGCCAAGGCCTAGGAAGCAGGTAAGACCCGCTTG...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGGGAGTTGGCAAGAGCTaGGTGTTCTGGGACTGGCAT +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWGVGKS*VFWDWH
Trigger: ATGCCAGTCCCAGAACACGCAGCTCTTGCCAACTCC...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp TCCTGTGGACACCAACTCAGGCACTTGAGTCACTCCATGCTGGGCAAGGAATTCAGGCATGAGCCACCATaGTCGGCCCTGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SCGHQLRHLSHSMLGKEFRHEPP*SALGRE
Trigger: TTCCCTGCCCAGGGCCGAGCATGGTGGCTCATGCCT...GAATTCCTTGCCCAGCATGGAGTGACTCAAGTGCCTGAGTTGGTGTCCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp AGAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCCTTCTCAGCTCGGATaGCCTCCAGGGAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RVLLLLPGHDLVVGAISVPSQLG*PPGRPA
Trigger: CGCAGGCCTCCCTGGAGGCCATCCGAGCTGAGAAGG...AACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGCCTGAGCCACCTGCTTaGTTGTGGGAAAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKPEPPA*LWERCG
Trigger: CCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGG...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTCGGAGTTGCTCCATCTaGGCTTCCATGATGTGCATC +
Preference number: 4 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWARSCSI*ASMMCI
Trigger: GATGCACATCATGGAAGCCCAGATGGAGCAACTCCG...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTGAAAGCCACTTCCTGTaGGGTGGGCTTATCCACACT +
Preference number: 4 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAESHFL*GGLIHT
Trigger: AGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTC...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGAGAGCTGGGCCAGCCTaGGTCCCCAGAATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLRAGPA*VPRMAC
Trigger: GCAGGCCATTCTGGGGACCCAGGCTGGCCCAGCTCT...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGGATGCTGCCAGTTCCTaGGCTAACTTCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQDAASS*ANFSGS
Trigger: GGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGAGGACCAGGGCGCTGTaGGCTTTGCATAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWRTRAL*ALHKSL
Trigger: CAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCT...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCATGTCCAGACATGGCTaGGTAAGGGGCCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSMSRHG*VRGLQK
Trigger: TTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACAT...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGATGTCCAGACATGGCTaGGTAAGGGGCCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQMSRHG*VRGLQK
Trigger: TTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACAT...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGTGGCATGTCCAGACATaGCTGGGTAAGGGGCCTACA +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQWHVQT*LGKGPT
Trigger: TGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCA...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTCATGCCACAGCTGTCTaGCATGTCCAGACATGGCTG +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCHATAV*HVQTWL
Trigger: CAGCCATGTCTGGACATGCCAGACAGCTGTGGCATG...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGCACCCCATCAGGCCCTaGACACCCATGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: FALIARARSCCWRDLGSLHPIRP*TPMCTS
Trigger: GCTGGTGCACATGGGTGTCCAGGGCCTGATGGGGTG...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGAGCCCAGGTTGCTTCTaGCCTGACCCCACTGATATG +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKSPGCF*PDPTDM
Trigger: CATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTGAGTCGAAGAGCTGCGTGTTCTaGGACTGGCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FSAACRSLMGASSPAPESKSCVF*DWHPRV
Trigger: CACCCTGGGATGCCAGTCCCAGAACACGCAGCTCTT...CGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp TGCTTCCCAAGGGAACCTGCTCCCCCTTCGCTTGTGCCTTCGAACTCCATCGGCCCATGTTGGCTAGGCTaGTGTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: CFPREPAPPSLVPSNSIGPCWLG*CQTPDL
Trigger: GAGGTCAGGAGTTTGACACCAGCCTAGCCAACATGG...GCCGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGATTAGCAAGGTGTGGTaGTACGCACCTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARISKVW*YAPVVP
Trigger: TGGAACTACAGGTGCGTACCACCACACCTTGCTAAT...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTCGTCAACCCCTCTCTaGTCCTCTGGGGGTAACTTG +
Preference number: 4 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHSSTPL*SSGGNL
Trigger: CAAGTTACCCCCAGAGGATCAGAGAGGGGTTGACGA...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTGAGTCGTACTGCAAGGCCAGATaGAATGCTGTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FSAACRSLMGASSPAPESYCKAR*NAVASA
Trigger: GGCTGAGGCCACAGCATTGCATCTGGCCTTGCAGTA...CGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCCAGTGTTCACTGTACTaGAAGGCCAGATGCAATGCT +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSQCSLY*KARCNA
Trigger: AGCATTGCATCTGGCCTTGCAGTACAGTGAACACTG...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTCCTTTTCAGCTGCTTaGAGGTCACTCATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKSFSAA*RSLMGA
Trigger: AGCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGA...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CCTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCATGCTTCCTTTTCAGCTaGTTGCAGGTCACTCATGGG +
Preference number: 4 (lower is better)
Translates to: PAPESASRRASRTLYASSCFLFS*LQVTHG
Trigger: CCCATGAGTGACCTGCAAGCAGCTGAAAAGGAAGCA...TGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGTGCCAGCAGCCTCCATaGTTCCTTTTCAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKCQQPP*FLFSCL
Trigger: CAAGCAGCTGAAAAGGAAGCATGGAGGCTGCTGGCA...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTGAGTCGCTGTGGATTCTGCTGTaGTCCTGCATCCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: FSAACRSLMGASSPAPESLWILL*SCIHGS
Trigger: GCTGCCATGGATGCAGGAGCACAGCAGAATCCACAG...CGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTGAGTCGGCTTATCCACACTGCTaGCTTCAGGGCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FSAACRSLMGASSPAPESAYPHC*LQGLAV
Trigger: CACAGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGC...CGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACTGGGCTTATCCACACTaGTGCCTTCAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WASGDRPVGTSAVAMQPHWAYPH*CLQGLA
Trigger: AGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGCCCA...GTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTGAGTCGCATCAATGCCACTGGTaGCACCAGGGACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FSAACRSLMGASSPAPESHQCHW*HQGQQE
Trigger: TTCCTGCTGTCCCTGGTGGCACCAGTGGCATTGATG...CGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGAGCAAGACTCTGTACTaGAAGGCCAGATGCAATGCT +
Preference number: 4 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQSKTLY*KARCNA
Trigger: AGCATTGCATCTGGCCTTGCAGTACAGAGTCTTGCT...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGGACACTGGTTCTGAGTaGTTCAGGACACTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQDTGSE*FRTLSS
Trigger: CGAGCTGAGTGTCCTGAAGCACTCAGAACCAGTGTC...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGCTTGGAGCTCCCACTaGCTGCCTCGACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLAWSSH*LPRPPL
Trigger: CAGAGGAGGTCGAGGCAGCCAGTGGGAGCTCCAAGC...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGATCTGGGTGCTGGAATaGCTGCGGAGGCGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLIWVLE*LRRRRS
Trigger: GCTTCGGCGCCTCCGCAGCCATTCCAGCACCCAGAT...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGAGAGACCCAAGGATCTaGGTGCTGGAATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKRDPRI*VLEWLR
Trigger: CCGCAGCCATTCCAGCACCCAGATCCTTGGGTCTCT...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGCGGAGTTGCTCCATCTaGGCTTCCATGATGTGCATC +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKRSCSI*ASMMCI
Trigger: GATGCACATCATGGAAGCCCAGATGGAGCAACTCCG...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACTTCAGGGCTTGGCTGTaGATTCTGCTGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WASGDRPVGTSAVAMQPHFRAWL*ILLCSC
Trigger: GCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAA...GTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGGCTGCCTTCAGGGCTTaGCTGTGGATTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKAAFRA*LWILLC
Trigger: GCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGC...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GCCAGGACCAGGGCGCTGTGGGCTTTGCATAAATCCCTGTTCAGCTCGGCACTCATGTCCAGACATGGCTaGGTAAGGGGCCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: ARTRALWALHKSLFSSALMSRHG*VRGLQK
Trigger: TTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACAT...GAGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp TGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACTGGCATGTCCAGACATaGCTGGGTAAGGGGCCTACA +
Preference number: 4 (lower is better)
Translates to: WASGDRPVGTSAVAMQPHWHVQT*LGKGPT
Trigger: TGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCA...GTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCATGCCACAGCTGTCTaGCATGTCCAGACATGGCTG +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLIHATAV*HVQTWL
Trigger: CAGCCATGTCTGGACATGCCAGACAGCTGTGGCATG...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp AGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGGGGGTTTCACCATGTTaGCCAAGCTGGTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: SPHESLPGLRETGQLELQGVSPC*PSWSQA
Trigger: AGCTTGAGACCAGCTTGGCCAACATGGTGAAACCCC...CTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp GGGCCAGGCTCTGAGAGAATCTTCATTAGAGAACGGCGCTCCTGGAGACGCTGGAAGATGCGTCTGGACTaGAGTGAAGGGCACAGACCA +
Preference number: 4 (lower is better)
Translates to: GPGSERIFIRERRSWRRWKMRLD*SEGHRP
Trigger: TGGTCTGTGCCCTTCACTCCAGTCCAGACGCATCTT...CCAGCGTCTCCAGGAGCGCCGTTCTCTAATGAAGATTCTCTCAGAGCCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CAA 72 bp GAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTaGGCGCGATCTCGGTTCACTGCAACCCCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: EFCSYCPGTILL*ARSRFTATPAS
Trigger: AGAGGCGGGGGTTGCAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
3UTR CAA 72 bp GCTTCCATGATGTGCATCTCAGGACTGAGGGGCTGGTaGGGAAGAGACCCAAGGATCTGGGTGCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: ASMMCISGLRGW*GRDPRIWVLEW
Trigger: CCATTCCAGCACCCAGATCCTTGGGTCTCTTCCCAACCAGCCCCTCAGTCCTGAGATGCACATCATGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAAGAATCCTGCAGCTCTTaGACCTCTTTCTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKESCSS*TSFCSV
Trigger: GACGCTGCAGAAAGAGGTTCAAGAGCTGCAGGATTC...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACGCCACCAGGTCCTGCTaGATTTGTGTCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHATRSC*ICVFSS
Trigger: ACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGC...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAACCTGCTGAGCCTCCATaGGTGCCATCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQPAEPP*VPSAAP
Trigger: TGGAGCAGCAGATGGCACTCATGGAGGCTCAGCAGG...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp CATCAGGCCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCTCATGCAACATGACATaGTGTCACTCCAGGACAGTT +
Preference number: 4 (lower is better)
Translates to: HQALDTHVHQLPSRQMCPSCNMT*CHSRTV
Trigger: AACTGTCCTGGAGTGACATCATGTCATGTTGCATGA...GGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGGCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp TGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAGCTGGCTGGGCAGGGAATTCTaGGGGCTTAAACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: CGHQVLLNLCLLQSGKSWLGREF*GLKLHG
Trigger: ACCATGAAGTTTAAGCCCTCAGAATTCCCTGCCCAG...CCAGCTCTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCAGTGCCCTCTGAATaGTTCTCCTTCGTCAACCCC +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKPVPSE*FSFVNP
Trigger: GGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGG...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAACTGAGGCCAGTTCCCTaGCAGAGCCCCCATCCATCT +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQLRPVP*QSPHPS
Trigger: AGATGGATGGGGGCTCTGGCAGGGAACTGGCCTCAG...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp AGAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCTTCCCAAGGGAACCTaGTCCCCCTTCGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RVLLLLPGHDLVVGAISVLPKGT*SPFACA
Trigger: GGCACAAGCGAAGGGGGAGCAGGTTCCCTTGGGAAG...AACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp AACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGTGCCAGCAGCCTCCATaGTTCCTTTTCAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: NFSCGYATSRTPEMRQSQCQQPP*FLFSCL
Trigger: CAAGCAGCTGAAAAGGAAGCATGGAGGCTGCTGGCA...CTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCTGCCAGCAGCCTCCATaGTTCCTTTTCAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TLDIASELESHFLWGGLICQQPP*FLFSCL
Trigger: CAAGCAGCTGAAAAGGAAGCATGGAGGCTGCTGGCA...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp AGAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTGACTGCAGCTGCTCCTaGAGGTCCAGTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RVLLLLPGHDLVVGAISVDCSCS*RSSVLV
Trigger: CACCAGGACACTGGACCTGCAGGAGCAGCTGCAGTC...AACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAACCTGTTCCAGCTCCCTaGGCAGAGACTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQPVPAP*AETAAA
Trigger: AGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGG...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp AGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCCCTCACGCCAAATGTaGCCCAACATGCCAAATCAT +
Preference number: 4 (lower is better)
Translates to: SPHESLPGLRETGQLELQPSRQM*PNMPNH
Trigger: ATGATTTGGCATGTTGGGGCACATTTGGCGTGAGGG...CTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCAGCAAGACTCTGTACTaGAAGGCCAGATGCAATGCT +
Preference number: 4 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSSKTLY*KARCNA
Trigger: AGCATTGCATCTGGCCTTGCAGTACAGAGTCTTGCT...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp AGAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTGCTGCTTCTGGGGCTTaGTGGGCTTCCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RVLLLLPGHDLVVGAISVAASGA*WASTAG
Trigger: ACCTGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGC...AACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTCCTGAGCCACCTGCTTaGTTGTGGGAAAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCPEPPA*LWERCG
Trigger: CCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGG...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCCATGCCACAGCTGTCTaGCATGTCCAGACATGGCTG +
Preference number: 4 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASHATAV*HVQTWL
Trigger: CAGCCATGTCTGGACATGCCAGACAGCTGTGGCATG...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGTCAGTCCCAGGGACCTaGTCCCATAGCCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLSVPGT*SHSPGC
Trigger: GCAACCTGGGCTATGGGACCAGGTCCCTGGGACTGA...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTGGAACTTCAGCTGTaGCTATGCAACCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKLELQL*LCNLTD
Trigger: GTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAA...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR TCA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTGAATCCTGCAGCTCTTaGACCTCTTTCTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCESCSS*TSFCSV
Trigger: GACGCTGCAGAAAGAGGTTCAAGAGCTGCAGGATTC...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR TCA 90 bp CCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCCAAATCATGCAACATaGCATGATGTCACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PWTPMCTSFPHAKCAPTCPNHAT*HDVTPG
Trigger: TCCTGGAGTGACATCATGTCATGTTGCATGATTTGG...GCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCAAGCAGAACCCTGTATaGCTCTTCACAGTGTTCACT +
Preference number: 4 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSKQNPV*LFTVFT
Trigger: AGTGAACACTGTGAAGAGGCATACAGGGTTCTGCTT...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCTTGGCTGTGGATTCTaGTGTGCTCCTGCATCCATG +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKLGCGF*CAPASM
Trigger: CATGGATGCAGGAGCACAGCAGAATCCACAGCCAAG...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGGGGCGCTGTGGGCTTTaGATAAATCCCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKGRCGL*INPCSA
Trigger: AGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCC...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCTGAGCCTCCATGAGTaGCATCTGCTGCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKLSLHE*HLLLQL
Trigger: AAGTTGGAGCAGCAGATGGCACTCATGGAGGCTCAG...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCAAATGTGCCCCAACATaGCAAATCATGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSKCAPT*QIMQHD
Trigger: GTCATGTTGCATGATTTGGCATGTTGGGGCACATTT...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAACTTCAGCTGTGGCTATaGAACCTCACGGACCCCCGA +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQLQLWL*NLTDPR
Trigger: TCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAG...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp AGAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTGCTTCTGGGGCTTGGTaGGCTTCCACTGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: RVLLLLPGHDLVVGAISVASGAW*ASTAGL
Trigger: CAAACCTGCAGTGGAAGCCCACCAAGCCCCAGAAGC...AACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAAGTGCTCCTGCATCCATaGCAGCCTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQVLLHP*QPPLVP
Trigger: TGGCACAAGAGGAGGCTGCCATGGATGCAGGAGCAC...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAAGCTGCCTTCAGGGCTTaGCTGTGGATTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQAAFRA*LWILLC
Trigger: GCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGC...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGAAAGCCACTTCCTGTaGGGTGGGCTTATCCACACT +
Preference number: 4 (lower is better)
Translates to: QLELQLWLCNLTDPRNASESHFL*GGLIHT
Trigger: AGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTC...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGCCATGTTGGCCAAGCTaGTCTCAAGCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: FALIARARSCCWRDLGSLPCWPS*SQAPDL
Trigger: GAGGTCAGGAGCTTGAGACCAGCTTGGCCAACATGG...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGTGGCAAAGATGCGTCTaGACTGGAGTGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKWQRCV*TGVKGT
Trigger: TGTGCCCTTCACTCCAGTCCAGACGCATCTTTGCCA...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTCCAGCCTGGCTAATGTaGCCTGTCTCACTAAAAATG +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCPAWLM*PVSLKM
Trigger: CATTTTTAGTGAGACAGGCCACATTAGCCAGGCTGG...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGAAGCAGAACCCTGTATaGCTCTTCACAGTGTTCACT +
Preference number: 4 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKKQNPV*LFTVFT
Trigger: AGTGAACACTGTGAAGAGGCATACAGGGTTCTGCTT...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTAAGCAGAACCCTGTATaGCTCTTCACAGTGTTCACT +
Preference number: 4 (lower is better)
Translates to: PESASRRASRTLYASSQCKQNPV*LFTVFT
Trigger: AGTGAACACTGTGAAGAGGCATACAGGGTTCTGCTT...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR GCA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCTGCTTCCTTTTCAGCTaGTTGCAGGTCACTCATGGG +
Preference number: 4 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASCFLFS*LQVTHG
Trigger: CCCATGAGTGACCTGCAAGCAGCTGAAAAGGAAGCA...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGCTTATCCACACTGCTaGCTTCAGGGCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLAYPHC*LQGLAV
Trigger: CACAGCCAAGCCCTGAAGGCAGCAGTGTGGATAAGC...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGATGCTGCCAGTTCCTaGGCTAACTTCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLDAASS*ANFSGS
Trigger: GGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAAAGGACCAGGGCGCTGTaGGCTTTGCATAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQRTRAL*ALHKSL
Trigger: CAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCT...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAAGTTCACATTCCACTTaGTGCCAGGCCAAAGACACC +
Preference number: 4 (lower is better)
Translates to: QLELQLWLCNLTDPRNASSSHST*CQAKDT
Trigger: GGTGTCTTTGGCCTGGCACCAAGTGGAATGTGAACT...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCATTCTTGTCAGTCCTGTaGACACCAACTCAGGCACTT +
Preference number: 4 (lower is better)
Translates to: TVSLYCRAASGAWWASTAFLSVL*TPTQAL
Trigger: AAGTGCCTGAGTTGGTGTCCACAGGACTGACAAGAA...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR TCA 90 bp AGAGTTTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCTCCAGGACAGTTTATaGCATGCCACAGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RVLLLLPGHDLVVGAISVLQDSL*HATAVW
Trigger: CCAGACAGCTGTGGCATGTCATAAACTGTCCTGGAG...AACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGCTTGGCTGTGGATTCTaGTGTGCTCCTGCATCCATG +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLLGCGF*CAPASM
Trigger: CATGGATGCAGGAGCACAGCAGAATCCACAGCCAAG...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR GCA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGCTGAGCCTCCATGAGTaGCATCTGCTGCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLLSLHE*HLLLQL
Trigger: AAGTTGGAGCAGCAGATGGCACTCATGGAGGCTCAG...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CCA 90 bp TCCTGTGGACACCAACTCAGGCACTTGAGTCACTCCATGCTGGGCAAGGAATTCCAGCAGATCTGTGGATaGCAAAGATGCGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: SCGHQLRHLSHSMLGKEFQQICG*QRCVWT
Trigger: AGTCCAGACGCATCTTTGCCATCCACAGATCTGCTG...GAATTCCTTGCCCAGCATGGAGTGACTCAAGTGCCTGAGTTGGTGTCCACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
3UTR CAA 72 bp CCCTGTAGCACAGCTGATAGCAGACGATTAAAGCATTaGAGCTTCTCAATGCTCCCCCGGAGTTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PCSTADSRRLKH*SFSMLPRSCSI
Trigger: GATGGAGCAACTCCGGGGGAGCATTGAGAAGCTCAAATGCTTTAATCGTCTGCTATCAGCTGTGCTACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR GCA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGATCTTTATAGGCACATaGCACCACGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: FALIARARSCCWRDLGSLIFIGT*HHAWLI
Trigger: AATTAGCCAGGCGTGGTGGCATGTGCCTATAAAGAT...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS GCA 90 bp TCTGTCGAGGCACTGACGCCGCTGCATGTGGCCGCCGCGTGGGGCTaGCGCCGCGGCCTGGAGCTGCTGCTGAGCCAAGGAGCGGACCCG +
Preference number: 5 (lower is better)
Translates to: SVEALTPLHVAAAWG*RRGLELLLSQGADP
Trigger: CGGGTCCGCTCCTTGGCTCAGCAGCAGCTCCAGGCCGCGGCGGCAGCCCCACGCGGCGGCCACATGCAGCGGCGTCAGTGCCTCGACAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598309.1
CDS CCA 90 bp CTCCTCCATGGGGCCCAGCTGCTCCAGCCCGGAGCTCACCGGAGGTaGGGCAAAGCTGGGCTTGGAGCTCCCACTGGCTGCCTCGACCTC +
Preference number: 5 (lower is better)
Translates to: LLHGAQLLQPGAHRR*GKAGLGAPTGCLDL
Trigger: GAGGTCGAGGCAGCCAGTGGGAGCTCCAAGCCCAGCTTTGCCCCACCTCCGGTGAGCTCCGGGCTGGAGCAGCTGGGCCCCATGGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000594190.5
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000600286.1
CDS-3UTR CAA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCGGCTGCTTCTGGGGCTaGGTGGGCTTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVGCFWG*VGFHCR
Trigger: CCTGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCC...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS CCA 90 bp GTTCACCGGGTGGAGCATGCCTCCCTCGCCGGCTTCGGGGCCGCGTaGCCCGGGCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: VHRVEHASLAGFGAA*PGHSLLSRSQCPLN
Trigger: ATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCACGCGGCCCCGAAGCCGGCGAGGGAGGCATGCTCCACCCGGTGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000594190.5
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000598309.1
ENST00000600286.1
CDS CCA 90 bp GGCCCAGCTGCTCCAGCCCGGAGCTCACCGGAGGTGGGGCAAAGCTaGGCTTGGAGCTCCCACTGGCTGCCTCGACCTCCTCTGAACTCT +
Preference number: 5 (lower is better)
Translates to: GPAAPARSSPEVGQS*AWSSHWLPRPPLNS
Trigger: AGAGTTCAGAGGAGGTCGAGGCAGCCAGTGGGAGCTCCAAGCCCAGCTTTGCCCCACCTCCGGTGAGCTCCGGGCTGGAGCAGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000594190.5
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000600286.1
CDS CCA 90 bp GTCAGTCGGGTGGAGCATGCCTCCCTCGCCGGCTTCGGGGCCGCGTaGCCCGGGCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: VSRVEHASLAGFGAA*PGHSLLSRSQCPLN
Trigger: ATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCACGCGGCCCCGAAGCCGGCGAGGGAGGCATGCTCCACCCGACTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431146.6
ENST00000598570.5
CDS-3UTR CAA 90 bp CAGCTGCAGCCGAAGCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCAGGCAGGAGAATCACTaGAACTGGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: QLQPKHQVRQGLPCGHQVRQENH*NWGGGG
Trigger: ACCTCCGCCTCCCCAGTTCAAGTGATTCTCCTGCCT...GACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGCTTCGGCTGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS CCA 90 bp CGGAGCTCACCGGAGGTGGGGCAAAGCTGGGCTTGGAGCTCCCACTaGCTGCCTCGACCTCCTCTGAACTCTCAGCCACGGGATCCAGTT +
Preference number: 5 (lower is better)
Translates to: RSSPEVGQSWAWSSH*LPRPPLNSQPRDPV
Trigger: AACTGGATCCCGTGGCTGAGAGTTCAGAGGAGGTCGAGGCAGCCAGTGGGAGCTCCAAGCCCAGCTTTGCCCCACCTCCGGTGAGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000594190.5
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000600286.1
CDS-3UTR CAA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCGGCTGCTTCTGGGGCTaGGTGGGCTTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: GEALSSPHESLPGLRETGGCFWG*VGFHCR
Trigger: CCTGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCC...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGCTTCCCCAGGGCCCTaGCAGTGGCTTCGAGCACCG +
Preference number: 5 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSASPGP*QWLRAP
Trigger: CGGTGCTCGAAGCCACTGCAAGGGCCCTGGGGAAGC...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS TCA 90 bp GGCAAAGCTGGGCTTGGAGCTCCCACTGGCTGCCTCGACCTCCTCTaGACTCTCAGCCACGGGATCCAGTTCACCGGGTGGAGCATGCCT +
Preference number: 5 (lower is better)
Translates to: GKAGLGAPTGCLDLL*TLSHGIQFTGWSMP
Trigger: AGGCATGCTCCACCCGGTGAACTGGATCCCGTGGCTGAGAGTTCAGAGGAGGTCGAGGCAGCCAGTGGGAGCTCCAAGCCCAGCTTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000594190.5
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000600286.1
CDS-3UTR CAA 90 bp TCCAACTTCCGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCGGAAGGCCAGGCTGCTCCCCCTTCGCTaGTGCCTTCGAACTCCATCG +
Preference number: 5 (lower is better)
Translates to: SNFRRCSSCFRWAPRKARLLPLR*CLRTPS
Trigger: CGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAG...CCTGGCCTTCCGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCGCCAGGGCCTCCCTaGCGGCCACCAGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKPPGPP*RPPGPA
Trigger: AGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGG...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGTTCCAGCTCCTCCAACTTCCGGCGTaGCTCTTCCTGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: LGTLRPSGSPLLSHLFQLLQLPA*LFLLPV
Trigger: CACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGAG...GAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp AGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGGCTTCCCCAGGGCCCTaGCAGTGGCTTCGAGCACCG +
Preference number: 5 (lower is better)
Translates to: SPHESLPGLRETGQLELQASPGP*QWLRAP
Trigger: CGGTGCTCGAAGCCACTGCAAGGGCCCTGGGGAAGC...CTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS GCA 90 bp TTCGGGGCCGCGTGGCCCGGGCACTCATTGCTGTCCAGAAGCCAGTaGCCTCTGAATGCTTCTCCTTCGTCAACCCCTGATTTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: FGAAWPGHSLLSRSQ*PLNASPSSTPDLVR
Trigger: CCGGACCAAATCAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCACGCGGCCCCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598309.1
CDS-3UTR CAA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTTCCTCTGGGGGTAACTaGATCAGAGGCCTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: PCSARHSETVWLAPSEPPSSGGN*IRGLSP
Trigger: GGGACTCAGGCCTCTGATCAAGTTACCCCCAGAGGA...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGTGGCCCGGGCACTCATaGCTGTCCAGAAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSWPGHS*LSRSQC
Trigger: GCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCA...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp TCCTGCAGGTCCAGTGTCCTGGTGAGCGATGCTGCCAGTTCCTGGGCTAACTTCGGCTGCTTCTGGGGCTaGGTGGGCTTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: SCRSSVLVSDAASSWANFGCFWG*VGFHCR
Trigger: CCTGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCC...GAAGTTAGCCCAGGAACTGGCAGCATCGCTCACCAGGACACTGGACCTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CCCTGTTCAGCTCGGCACTCTGAGACCGTCTGGCTCGCCCCTTCTGAGCCACCTGAGCCACCTGCTTGGTaGTGGGAAAGATGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PCSARHSETVWLAPSEPPEPPAW*WERCGQ
Trigger: CTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTC...AGGTGGCTCAGAAGGGGCGAGCCAGACGGTCTCAGAGTGCCGAGCTGAACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp TTTGCTCTTATTGCCCGGGCACGATCTTGTTGTTGGCGCGATCTCGGTTCACTGCCGCCAGGGCCTCCCTaGCGGCCACCAGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: FALIARARSCCWRDLGSLPPGPP*RPPGPA
Trigger: AGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGG...CAGTGAACCGAGATCGCGCCAACAACAAGATCGTGCCCGGGCAATAAGAGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCGCTTCCCCAGGGCCCTaGCAGTGGCTTCGAGCACCG +
Preference number: 5 (lower is better)
Translates to: TLDIASELESHFLWGGLIASPGP*QWLRAP
Trigger: CGGTGCTCGAAGCCACTGCAAGGGCCCTGGGGAAGC...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS TCA 90 bp CCGCGTGGCCCGGGCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTaGATGCTTCTCCTTCGTCAACCCCTCTCTGATCCTCTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: PRGPGTHCCPEASAL*MLLLRQPLSDPLGV
Trigger: TACCCCCAGAGGATCAGAGAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCACGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000431146.6
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000598570.5
CDS TCA 90 bp CCGCGTGGCCCGGGCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTaGATGCTTCTCCTTCGTCAACCCCTGATTTGGTCCGGGCATGGT +
Preference number: 5 (lower is better)
Translates to: PRGPGTHCCPEASAL*MLLLRQPLIWSGHG
Trigger: ACCATGCCCGGACCAAATCAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCACGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598309.1
CDS-3UTR CAA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCAGCTTCCACTGCAGGTTaGTGGGGCACTTCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSASTAG*WGTSGA
Trigger: AGCCCCCGAAGTGCCCCACAAACCTGCAGTGGAAGC...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCGGGGGCACAGTCTCCTaGTACTGTAGGGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSGGTVS*YCRAAS
Trigger: AGAAGCAGCCCTACAGTACAAGGAGACTGTGCCCCC...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp TCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTGGGGGCACAGTCTCCTaGTACTGTAGGGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SGPPGPPLRPPGPAEFVSGGTVS*YCRAAS
Trigger: AGAAGCAGCCCTACAGTACAAGGAGACTGTGCCCCC...AGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCAATGCTCCCCCGGAGTaGCTCCATCTGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSNAPPE*LHLGFH
Trigger: ATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCATT...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp GGAGAAGCTCTGTCCAGTCCCCATGAATCCCTCCCTGGGCTTCGGGAGACAGGCCCTTCACAGCGGCCCTaGTATCCCTGTAGCACAGCT +
Preference number: 5 (lower is better)
Translates to: GEALSSPHESLPGLRETGPSQRP*YPCSTA
Trigger: AGCTGTGCTACAGGGATACAAGGGCCGCTGTGAAGG...GCCTGTCTCCCGAAGCCCAGGGAGGGATTCATGGGGACTGGACAGAGCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp GATGCTGCCAGTTCCTGGGCTAACTTCTCTGGGTCCCAGGCTCTGCCCACCTGGCCTTCACAGCGGCCCTaGTATCCCTGTAGCACAGCT +
Preference number: 5 (lower is better)
Translates to: DAASSWANFSGSQALPTWPSQRP*YPCSTA
Trigger: AGCTGTGCTACAGGGATACAAGGGCCGCTGTGAAGG...CCAGGTGGGCAGAGCCTGGGACCCAGAGAAGTTAGCCCAGGAACTGGCAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp TGCAACCTCACGGACCCCCGAAATGCGTCAGTCCCAGGGACCTGGTCCCATAGCGGGGGTTTCACCATGTaGGCCAAGCTGGTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: CNLTDPRNASVPGTWSHSGGFTM*AKLVSS
Trigger: GCTTGAGACCAGCTTGGCCAACATGGTGAAACCCCC...GCTATGGGACCAGGTCCCTGGGACTGACGCATTTCGGGGGTCCGTGAGGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS GCA 90 bp TTCGGGGCCGCGTGGCCCGGGCACTCATTGCTGTCCAGAAGCCAGTaGCCTCTGAATGCTTCTCCTTCGTCAACCCCTTCACTACGTCTT +
Preference number: 5 (lower is better)
Translates to: FGAAWPGHSLLSRSQ*PLNASPSSTPSLRL
Trigger: AAGACGTAGTGAAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCACGCGGCCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594190.5
ENST00000600286.1
CDS-3UTR CAA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACTCCTCTGGGGGTAACTaGATCAGAGGCCTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHSSGGN*IRGLSP
Trigger: GGGACTCAGGCCTCTGATCAAGTTACCCCCAGAGGA...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp TGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACTGGCCCGGGCACTCATaGCTGTCCAGAAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: WASGDRPVGTSAVAMQPHWPGHS*LSRSQC
Trigger: GCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCA...GTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp GGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACGCTTCCACTGCAGGTTaGTGGGGCACTTCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: GHSFGAGKPLPVGWAYPHASTAG*WGTSGA
Trigger: AGCCCCCGAAGTGCCCCACAAACCTGCAGTGGAAGC...GTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTGGGGGCACAGTCTCCTaGTACTGTAGGGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWAGGTVS*YCRAAS
Trigger: AGAAGCAGCCCTACAGTACAAGGAGACTGTGCCCCC...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCACTGCTCCCCCTTCGCTaGTGCCTTCGAACTCCATCG +
Preference number: 5 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSLLPLR*CLRTPS
Trigger: CGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAG...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp GCATCAGGTCCGCCAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGGGAATCCTGCAGCTCTaGAACCTCTTTCTGCAGCGT +
Preference number: 5 (lower is better)
Translates to: ASGPPGPPLRPPGPAEFVGILQL*NLFLQR
Trigger: ACGCTGCAGAAAGAGGTTCAAGAGCTGCAGGATTCC...CACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTGGCGGACCTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCATGGCAGCCTCCTCTaGTGCCAGCAGCCTCCATGC +
Preference number: 5 (lower is better)
Translates to: TLDIASELESHFLWGGLIHGSLL*CQQPPC
Trigger: GCATGGAGGCTGCTGGCACAAGAGGAGGCTGCCATG...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp TTTTCAGCTGCTTGCAGGTCACTCATGGGGGCTTCGTCTCCTGCTCCTGAGTCGCATGGCAGCCTCCTCTaGTGCCAGCAGCCTCCATGC +
Preference number: 5 (lower is better)
Translates to: FSAACRSLMGASSPAPESHGSLL*CQQPPC
Trigger: GCATGGAGGCTGCTGGCACAAGAGGAGGCTGCCATG...CGACTCAGGAGCAGGAGACGAAGCCCCCATGAGTGACCTGCAAGCAGCTGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCTGCTGCCTTCAGGGCTaGGCTGTGGATTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PWTPMCTSFPHAKCAPTCCCLQG*AVDSAV
Trigger: CACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA...GCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp GGAGACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTGCTGCCTTCAGGGCTaGGCTGTGGATTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: GDAGHSFGAGKPLPVGWACCLQG*AVDSAV
Trigger: CACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA...AGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CCTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCATGCTGCCTTCAGGGCTaGGCTGTGGATTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PAPESASRRASRTLYASSCCLQG*AVDSAV
Trigger: CACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA...TGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp GGGCCAGGCTCTGAGAGAATCTTCATTAGAGAACGGCGCTCCTGGAGACGCTGGCTCCAACTTCCGGCGTaGCTCTTCCTGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: GPGSERIFIRERRSWRRWLQLPA*LFLLPV
Trigger: CACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGAG...CCAGCGTCTCCAGGAGCGCCGTTCTCTAATGAAGATTCTCTCAGAGCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CTTCTGAGCCACCTGTTCCAGCTCCCTGCGCAGAGACTGCAGCTGCTCCTGCAGCCCCCATCCATCTTCTaGTCAGTCCTGTGGACACCA +
Preference number: 5 (lower is better)
Translates to: LLSHLFQLPAQRLQLLLQPPSIF*SVLWTP
Trigger: TGGTGTCCACAGGACTGACAAGAAGATGGATGGGGG...CTGCAGGAGCAGCTGCAGTCTCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS TCA 90 bp CCGCGTGGCCCGGGCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTaGATGCTTCTCCTTCGTCAACCCCTTCACTACGTCTTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: PRGPGTHCCPEASAL*MLLLRQPLHYVFVH
Trigger: GTGGACAAAGACGTAGTGAAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGGGCCACGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594190.5
ENST00000600286.1
CDS-3UTR CAA 90 bp GGGACCTGGTCCCATAGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTCCTCTGGGGGTAACTaGATCAGAGGCCTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: GTWSHSPGCFWPDPTDMKSSGGN*IRGLSP
Trigger: GGGACTCAGGCCTCTGATCAAGTTACCCCCAGAGGA...CTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCTATGGGACCAGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCAGCTTCCACTGCAGGTTaGTGGGGCACTTCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: QLELQLWLCNLTDPRNASASTAG*WGTSGA
Trigger: AGCCCCCGAAGTGCCCCACAAACCTGCAGTGGAAGC...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp TGCTGCCTTCAGGGCTTGGCTGTGGATTCTGCTGTGCTCCTGCATCCATGGCAGGAGCCACCTGCTTGGTaGTGGGAAAGATGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CCLQGLAVDSAVLLHPWQEPPAW*WERCGQ
Trigger: CTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTC...CTGCCATGGATGCAGGAGCACAGCAGAATCCACAGCCAAGCCCTGAAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGGGGAAGAATGCTCCCCCGGAGTaGCTCCATCTGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LPCGHQVLLNLCLLQSGKNAPPE*LHLGFH
Trigger: ATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCATT...CTTCCCCGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCAAATGCTCCCCCGGAGTaGCTCCATCTGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSNAPPE*LHLGFH
Trigger: ATGGAAGCCCAGATGGAGCAACTCCGGGGGAGCATT...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCTTCCTTTTCAGCTGCTaGCAGGTCACTCATGGGGGC +
Preference number: 5 (lower is better)
Translates to: PWTPMCTSFPHAKCAPTCFLFSC*QVTHGG
Trigger: GCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGAA...GCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCCATGGCAGCCTCCTCTaGTGCCAGCAGCCTCCATGC +
Preference number: 5 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASHGSLL*CQQPPC
Trigger: GCATGGAGGCTGCTGGCACAAGAGGAGGCTGCCATG...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp TGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACCCGGGCACGATCTTGTaGTTGGCGCGATCTCGGTTC +
Preference number: 5 (lower is better)
Translates to: WASGDRPVGTSAVAMQPHPGTIL*LARSRF
Trigger: GAACCGAGATCGCGCCAACAACAAGATCGTGCCCGG...GTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp TGGGCTTCGGGAGACAGGCCAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGAGCCACCTGCTTGGTaGTGGGAAAGATGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: WASGDRPVGTSAVAMQPHEPPAW*WERCGQ
Trigger: CTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTC...GTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTGGCCTGTCTCCCGAAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCATTCCTTTTCAGCTGCTaGCAGGTCACTCATGGGGGC +
Preference number: 5 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSFLFSC*QVTHGG
Trigger: GCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGAA...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CAGGGCCTCCCTTGCGGCCACCAGGTCCTGCTGAATTTGTGTCTTCTCCAGTCGAGAAACAGAGTGAAGTaGGACTGTGACGGGCACTGG +
Preference number: 5 (lower is better)
Translates to: QGLPCGHQVLLNLCLLQSRNRVK*DCDGHW
Trigger: CCAGTGCCCGTCACAGTCCAACTTCACTCTGTTTCT...CGACTGGAGAAGACACAAATTCAGCAGGACCTGGTGGCCGCAAGGGAGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CAA 90 bp TCATTAGAGAACGGCGCTCCTGGAGACGCTGGACATAGCTTCGGAGCTGGAAAGGAGCGGAGCAGGGAGTaGGCAAGAGCTGCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SLENGAPGDAGHSFGAGKERSRE*ARAACS
Trigger: AGAACACGCAGCTCTTGCCAACTCCCTGCTCCGCTC...CTTTCCAGCTCCGAAGCTATGTCCAGCGTCTCCAGGAGCGCCGTTCTCTAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CAA 90 bp CTGCTCCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACTTAAACTTCATGGTCTaGGGGAGGTGTGAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: LLLSRPPAEQAEPCMPLHLNFMV*GRCERS
Trigger: GCTCCGCTCACACCTCCCCAAGACCATGAAGTTTAA...GTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CAA 90 bp GAACCACTGCCTGAGCCACCTGCTTGGTTGTGGGAAAGATGTGGGCAGGGCTCCCAGGGTTTCACCATGTaGGCTAGGCTGGTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: EPLPEPPAWLWERCGQGSQGFTM*ARLVSN
Trigger: GTTTGACACCAGCCTAGCCAACATGGTGAAACCCTG...GGAGCCCTGCCCACATCTTTCCCACAACCAAGCAGGTGGCTCAGGCAGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CAA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCACACCAACTCAGGCACTaGAGTCACTCCATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TVSLYCRAASGAWWASTAHQLRH*SHSMLG
Trigger: GCCCAGCATGGAGTGACTCAAGTGCCTGAGTTGGTG...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CAA 90 bp CTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTTCCCCCATCCATCTTCTaGTCAGTCCTGCTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: LSRPPAEQAEPCMPLHSVPPSIF*SVLLPR
Trigger: CCTAGGAAGCAGGACTGACAAGAAGATGGATGGGGG...AACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324554.9
CDS-3UTR CAA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTCCTTCACAGCGGCCCTaGTATCCCTGTAGCACAGCT +
Preference number: 5 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCPSQRP*YPCSTA
Trigger: AGCTGTGCTACAGGGATACAAGGGCCGCTGTGAAGG...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp ACGCTGGACATAGCTTCGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCTTCCTTTTCAGCTGCTaGCAGGTCACTCATGGGGGC +
Preference number: 5 (lower is better)
Translates to: TLDIASELESHFLWGGLIFLFSC*QVTHGG
Trigger: GCCCCCATGAGTGACCTGCAAGCAGCTGAAAAGGAA...GATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCGAAGCTATGTCCAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp ACAGCTGTCTGGCATGTCCAGACATGGCTGGGTAAGGGGCCTACAGAAAGGTGTAGGCAGGAGAATCACTaGAACTGGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: TAVWHVQTWLGKGPTERCRQENH*NWGGGG
Trigger: ACCTCCGCCTCCCCAGTTCAAGTGATTCTCCTGCCT...ACACCTTTCTGTAGGCCCCTTACCCAGCCATGTCTGGACATGCCAGACAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CAGTTGGAACTTCAGCTGTGGCTATGCAACCTCACGGACCCCCGAAATGCGTCACCCCCATCCATCTTCTaGTCAGTCCTGCTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: QLELQLWLCNLTDPRNASPPSIF*SVLLPR
Trigger: CCTAGGAAGCAGGACTGACAAGAAGATGGATGGGGG...TGACGCATTTCGGGGGTCCGTGAGGTTGCATAGCCACAGCTGAAGTTCCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp TTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGGTGCCAGGCCAACTGCTCCCCCTTCGCTaGTGCCTTCGAACTCCATCG +
Preference number: 5 (lower is better)
Translates to: FWPDPTDMKFTFHLVPGQLLPLR*CLRTPS
Trigger: CGATGGAGTTCGAAGGCACAAGCGAAGGGGGAGCAG...TTGGCCTGGCACCAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp ACAGTCTCCTTGTACTGTAGGGCTGCTTCTGGGGCTTGGTGGGCTTCCACTGCAGGAATCCTGCAGCTCTaGAACCTCTTTCTGCAGCGT +
Preference number: 5 (lower is better)
Translates to: TVSLYCRAASGAWWASTAGILQL*NLFLQR
Trigger: ACGCTGCAGAAAGAGGTTCAAGAGCTGCAGGATTCC...TGCAGTGGAAGCCCACCAAGCCCCAGAAGCAGCCCTACAGTACAAGGAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597928.5
CDS-3UTR CAA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGCTCCAACTTCCGGCGTaGCTCTTCCTGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLLQLPA*LFLLPV
Trigger: CACCGGAAGCAGGAAGAGCAACGCCGGAAGTTGGAG...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp CCCTGGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCAGAGTTTTGCTCTTATaGCCCGGGCACGATCTTGTT +
Preference number: 5 (lower is better)
Translates to: PWTPMCTSFPHAKCAPTCRVLLL*PGHDLV
Trigger: AACAAGATCGTGCCCGGGCAATAAGAGCAAAACTCT...GCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp GCTCACTGCAACCTCCACTTCCCAAGCTCAAGTTACCCTCCCACTTTAGCCTCCGGAATCCTGCAGCTCTaGAACCTCTTTCTGCAGCGT +
Preference number: 5 (lower is better)
Translates to: AHCNLHFPSSSYPPTLASGILQL*NLFLQR
Trigger: ACGCTGCAGAAAGAGGTTCAAGAGCTGCAGGATTCC...GGAGGCTAAAGTGGGAGGGTAACTTGAGCTTGGGAAGTGGAGGTTGCAGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS TCA 90 bp TCGTCAACCCCTTCACTACGTCTTTGTCCACTTTCCTCCTCTATTTaGGCCTGGGAATGCGATCTCAAGAATTCCCTCTCCTCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: SSTPSLRLCPLSSSI*AWECDLKNSLSSPA
Trigger: GGCCGGGGAGGAGAGGGAATTCTTGAGATCGCATTCCCAGGCTCAAATAGAGGAGGAAAGTGGACAAAGACGTAGTGAAGGGGTTGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594190.5
ENST00000600286.1
CDS-3UTR CAA 90 bp CCTGAGTCGGCCTCCCGCAGAGCAAGCAGAACCCTGTATGCCTCTTCACAGTGTAGACGATTAAAGCATTaGAGCTTCTCAATGCTCCCC +
Preference number: 5 (lower is better)
Translates to: PESASRRASRTLYASSQCRRLKH*SFSMLP
Trigger: GGGGAGCATTGAGAAGCTCAAATGCTTTAATCGTCT...ACACTGTGAAGAGGCATACAGGGTTCTGCTTGCTCTGCGGGAGGCCGACTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp CGGAGCTGGAAAGCCACTTCCTGTGGGGTGGGCTTATCCACACTGCTGCCTTCAAGACGATTAAAGCATTaGAGCTTCTCAATGCTCCCC +
Preference number: 5 (lower is better)
Translates to: RSWKATSCGVGLSTLLPSRRLKH*SFSMLP
Trigger: GGGGAGCATTGAGAAGCTCAAATGCTTTAATCGTCT...TGAAGGCAGCAGTGTGGATAAGCCCACCCCACAGGAAGTGGCTTTCCAGCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324554.9
ENST00000597928.5
CDS-3UTR CAA 90 bp GGACACCCATGTGCACCAGCTTCCCTCACGCCAAATGTGCCCCAACATGCCAAAAGACGATTAAAGCATTaGAGCTTCTCAATGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GHPCAPASLTPNVPQHAKRRLKH*SFSMLP
Trigger: GGGGAGCATTGAGAAGCTCAAATGCTTTAATCGTCT...TTTGGCATGTTGGGGCACATTTGGCGTGAGGGAAGCTGGTGCACATGGGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS-3UTR CAA 90 bp AGCCCAGGTTGCTTCTGGCCTGACCCCACTGATATGAAGTTCACATTCCACTTGAAGTTCACATTCCACTaGGTGCCAGGCCAAAGACAC +
Preference number: 5 (lower is better)
Translates to: SPGCFWPDPTDMKFTFHLKFTFH*VPGQRH
Trigger: GTGTCTTTGGCCTGGCACCAAGTGGAATGTGAACTT...CAAGTGGAATGTGAACTTCATATCAGTGGGGTCAGGCCAGAAGCAACCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252597.8
CDS TCA 72 bp CCCTCTTGCGCTGCCGCCCCAGATCTGTCGAGGCACTaGCGCCGCTGCATGTGGCCGCCGCGTGGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: PSCAAAPDLSRH*RRCMWPPRGAA
Trigger: GGCAGCCCCACGCGGCGGCCACATGCAGCGGCGTCAGTGCCTCGACAGATCTGGGGCGGCAGCGCAAGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598309.1
CDS CCA 72 bp GGGGCCCAGCTGCTCCAGCCCGGAGCTCACCGGAGGTaGGGCAAAGCTGGGCTTGGAGCTCCCACTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GAQLLQPGAHRR*GKAGLGAPTGC
Trigger: GCAGCCAGTGGGAGCTCCAAGCCCAGCTTTGCCCCACCTCCGGTGAGCTCCGGGCTGGAGCAGCTGGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000594190.5
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000600286.1
CDS TCA 72 bp CCGGGCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTaGATGCTTCTCCTTCGTCAACCCCTCTCTGATCCT +
Preference number: 6 (lower is better)
Translates to: PGTHCCPEASAL*MLLLRQPLSDP
Trigger: AGGATCAGAGAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000431146.6
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000598570.5
CDS TCA 72 bp CCGGGCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTaGATGCTTCTCCTTCGTCAACCCCTTCACTACGTC +
Preference number: 6 (lower is better)
Translates to: PGTHCCPEASAL*MLLLRQPLHYV
Trigger: GACGTAGTGAAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594190.5
ENST00000600286.1
CDS TCA 72 bp AGATCTGTGGATGGCAAAGATGCGTCTGGACTGGAGTaGAGGGCACAGACCAAGCGGGTCTTACCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: RSVDGKDASGLE*RAQTKRVLPAS
Trigger: GGAAGCAGGTAAGACCCGCTTGGTCTGTGCCCTTCACTCCAGTCCAGACGCATCTTTGCCATCCACAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596436.5
ENST00000597928.5
ENST00000600286.1
CDS GCA 72 bp GCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTGAATaGTTCTCCTTCGTCAACCCCTCTCTGATCCTCTGG +
Preference number: 6 (lower is better)
Translates to: ALIAVQKPVPSE*FSFVNPSLILW
Trigger: CCAGAGGATCAGAGAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252597.8
ENST00000324554.9
ENST00000431146.6
ENST00000595993.5
ENST00000596436.5
ENST00000597928.5
ENST00000598570.5
CDS CCA 72 bp GCACATCAGCAGATCTGTGGATGGCAAAGATGCGTCTaGACTGGAGTGAAGGGCACAGACCAAGCGGGTCTT +
Preference number: 6 (lower is better)
Translates to: AHQQICGWQRCV*TGVKGTDQAGL
Trigger: AAGACCCGCTTGGTCTGTGCCCTTCACTCCAGTCCAGACGCATCTTTGCCATCCACAGATCTGCTGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596436.5
ENST00000597928.5
ENST00000600286.1
CDS GCA 72 bp GCACTCATTGCTGTCCAGAAGCCAGTGCCCTCTGAATaGTTCTCCTTCGTCAACCCCTTCACTACGTCTTTG +
Preference number: 6 (lower is better)
Translates to: ALIAVQKPVPSE*FSFVNPFTTSL
Trigger: CAAAGACGTAGTGAAGGGGTTGACGAAGGAGAAGCATTCAGAGGGCACTGGCTTCTGGACAGCAATGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594190.5
ENST00000600286.1
CDS CAA 90 bp TTCGTCAACCCCTTCACTACGTCTTTGTCCACTTTCCTCCTCTATTaGAGCCTGGGAATGCGATCTCAAGAATTCCCTCTCCTCCCCGGC +
Preference number: 6 (lower is better)
Translates to: FVNPFTTSLSTFLLY*SLGMRSQEFPLLPG
Trigger: GCCGGGGAGGAGAGGGAATTCTTGAGATCGCATTCCCAGGCTCAAATAGAGGAGGAAAGTGGACAAAGACGTAGTGAAGGGGTTGACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594190.5
ENST00000600286.1
CDS TCA 72 bp CCTTCACTACGTCTTTGTCCACTTTCCTCCTCTATTTaGGCCTGGGAATGCGATCTCAAGAATTCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: PSLRLCPLSSSI*AWECDLKNSLS
Trigger: GGAGAGGGAATTCTTGAGATCGCATTCCCAGGCTCAAATAGAGGAGGAAAGTGGACAAAGACGTAGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594190.5
ENST00000600286.1
CDS CAA 72 bp CCCTTCACTACGTCTTTGTCCACTTTCCTCCTCTATTaGAGCCTGGGAATGCGATCTCAAGAATTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: PFTTSLSTFLLY*SLGMRSQEFPL
Trigger: GAGAGGGAATTCTTGAGATCGCATTCCCAGGCTCAAATAGAGGAGGAAAGTGGACAAAGACGTAGTGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594190.5
ENST00000600286.1