RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USH2A (Homo sapiens)

Ensembl gene IDs: ENSG00000042781

Ensembl transcript IDs: ENST00000307340.8, ENST00000366942.3, ENST00000463147.1, ENST00000481786.1, ENST00000674083.1

Found 2050 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCACAGAGCTAGATaGAATCTCAATACCCAAAAAGTCCACAATCTTTTACTGTTGGGC +
Preference number: 1 (lower is better)
Translates to: LGVGQSEELLSHRAR*NLNTQKVHNLLLLG
Trigger: GCCCAACAGTAAAAGATTGTGGACTTTTTGGGTATTGAGATTTCATCTAGCTCTGTGAGAGAGCAGCTCCTCAGACTGACCAACTCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR TCA 90 bp GCTGTGATCATTAGAATAACTATTCTTGCAGGATTGTGTCAACCCTaGCAGAAATGGCAGATAGAAATGAACAGCAGTGACATCCTTTCA +
Preference number: 1 (lower is better)
Translates to: AVIIRITILAGLCQP*QKWQIEMNSSDILS
Trigger: TGAAAGGATGTCACTGCTGTTCATTTCTATCTGCCATTTCTGTCAGGGTTGACACAATCCTGCAAGAATAGTTATTCTAATGATCACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR GCA 90 bp GTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTaGAAACTCATTTGCTCAGAGAACACAGTGAATAATATTTCAAGA +
Preference number: 1 (lower is better)
Translates to: VTGCILRISNSMRAF*KLICSENTVNNISR
Trigger: TCTTGAAATATTATTCACTGTGTTCTCTGAGCAAATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
3UTR TCA 90 bp ATTGTGTCAACCCTGACAGAAATGGCAGATAGAAATGAACAGCAGTaGCATCCTTTCAACAGAATCATTTTTGAGCCAGTAACTAACTTA +
Preference number: 1 (lower is better)
Translates to: IVSTLTEMADRNEQQ*HPFNRIIFEPVTNL
Trigger: TAAGTTAGTTACTGGCTCAAAAATGATTCTGTTGAAAGGATGTCACTGCTGTTCATTTCTATCTGCCATTTCTGTCAGGGTTGACACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGGAGTTGGTCAGTCTaGGGAGCTGCTCTCTCACAG +
Preference number: 2 (lower is better)
Translates to: KSTDASATHPRSTESESLRSWSV*GAALSQ
Trigger: CTGTGAGAGAGCAGCTCCTCAGACTGACCAACTCCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAATGGGTGCAGACCTTaGATTCCAGGGTTACGTCTT +
Preference number: 2 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSNGCRP*IPGLRL
Trigger: AAGACGTAACCCTGGAATGCAAGGTCTGCACCCATT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGTTTCAGTAACGGGGTaGATACTGAGAATCTCCAAT +
Preference number: 2 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRVSVTG*ILRISN
Trigger: ATTGGAGATTCTCAGTATGCACCCCGTTACTGAAAC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
3UTR-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGTAGCTCACAGAAGGTaGACACAGCCTTGGTTAATG +
Preference number: 2 (lower is better)
Translates to: TLEHLEALKSTDASATHPVAHRR*TQPWLM
Trigger: CATTAACCAAGGCTGTGTCCACCTTCTGTGAGCTAC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGACAAAGCACATACTTTaGTCCAATAAGGCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRTKHIL*SNKAAS
Trigger: AGAAGCAGCCTTATTGGATCAAAGTATGTGCTTTGT...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
3UTR-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGCATTTATGATGTGTaGGTGATAACCCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSIYDV*VITQEE
Trigger: TTCCTCCTGGGTTATCACTCACACATCATAAATGCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGAAATGAACAGCAGTaGCATCCTTTCAACAGAATC +
Preference number: 2 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSRNEQQ*HPFNRI
Trigger: GATTCTGTTGAAAGGATGTCACTGCTGTTCATTTCT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGTCAGTCTGAGGAGCTaGTCTCTCACAGAGCTAGAT +
Preference number: 2 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTVSLRS*SLTELD
Trigger: ATCTAGCTCTGTGAGAGAGCAGCTCCTCAGACTGAC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAGGTGGACACAGCCTTaGTTAATGCTTATTTGTGCC +
Preference number: 2 (lower is better)
Translates to: TESESLEASLHGLYNRGLRWTQP*LMLICA
Trigger: GGCACAAATAAGCATTAACCAAGGCTGTGTCCACCT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAGCATTTATGATGTGTaGGTGATAACCCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: TESESLEASLHGLYNRGLSIYDV*VITQEE
Trigger: TTCCTCCTGGGTTATCACTCACACATCATAAATGCT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGCTTTTCAGCATTTATaGTGTGTGAGTGATAACCCA +
Preference number: 2 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQAFQHL*CVSDNP
Trigger: TGGGTTATCACTCACACATCATAAATGCTGAAAAGC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGGATTGTGTCAACCCTaGCAGAAATGGCAGATAGAA +
Preference number: 2 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLGLCQP*QKWQIE
Trigger: TTCTATCTGCCATTTCTGTCAGGGTTGACACAATCC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGTTTGTCGACCTGGTaGAAAGTTTGGGATTCATTT +
Preference number: 2 (lower is better)
Translates to: KSTDASATHPRSTESESLSLSTW*KVWDSF
Trigger: AAATGAATCCCAAACTTTGCACCAGGTCGACAAACT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAAAAGTTTGTCGACCTaGTGCAAAGTTTGGGATTCA +
Preference number: 2 (lower is better)
Translates to: TLEHLEALKSTDASATHPKSLST*CKVWDS
Trigger: TGAATCCCAAACTTTGCACCAGGTCGACAAACTTTT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATTTACTGTTGGGCCCTaGGGTAATACATTGTTTTCA +
Preference number: 2 (lower is better)
Translates to: KSTDASATHPRSTESESLFTVGP*GNTLFS
Trigger: TGAAAACAATGTATTACCCCAGGGCCCAACAGTAAA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCAAACAGAACCAAGTaGCAATTACATACTTCTTTG +
Preference number: 2 (lower is better)
Translates to: TLEHLEALKSTDASATHPPNRTK*QLHTSL
Trigger: CAAAGAAGTATGTAATTGTCACTTGGTTCTGTTTGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTCACAGAGCTAGATaGAATCTCAATACCCAAAAA +
Preference number: 2 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSHRAR*NLNTQK
Trigger: TTTTTGGGTATTGAGATTTCATCTAGCTCTGTGAGA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCATACAGGCTTCTGTCTaGCCTAAGCTATGGAGTCAA +
Preference number: 2 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTIQASV*PKLWSQ
Trigger: TTGACTCCATAGCTTAGGGCAGACAGAAGCCTGTAT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACTGGCCTGTGCTTTTaGCACTTATGGTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTGLCF*HLWLAN
Trigger: GTTTGCCAACCATAAGTGTCAAAAGCACAGGCCAGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAATGGGTGCAGACCTTaGATTCCAGGGTTACGTCTT +
Preference number: 2 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQNGCRP*IPGLRL
Trigger: AAGACGTAACCCTGGAATGCAAGGTCTGCACCCATT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTACTTTACAAGTTTTTaGCTGTCTCTGGTTGTAGAT +
Preference number: 2 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQYFTSF*LSLVVD
Trigger: ATCTACAACCAGAGACAGGCAAAAACTTGTAAAGTA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGTCACTGCCAGATGTaGACAATTATTTCAGATGCT +
Preference number: 2 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSHCQM*TIISDA
Trigger: AGCATCTGAAATAATTGTGCACATCTGGCAGTGACT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATTTTCTACAGTCACTaGCAGATGTGCACAATTATT +
Preference number: 2 (lower is better)
Translates to: TLEHLEALKSTDASATHPIFYSH*QMCTII
Trigger: AATAATTGTGCACATCTGGCAGTGACTGTAGAAAAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTTTACTGTTGGGCCCTaGGGTAATACATTGTTTTCA +
Preference number: 2 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLFTVGP*GNTLFS
Trigger: TGAAAACAATGTATTACCCCAGGGCCCAACAGTAAA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTCAAGAAACATGTCCTaGCACATACTTCACAAAAAG +
Preference number: 2 (lower is better)
Translates to: TGCILRISNSMRAFCKLISRNMS*HILHKK
Trigger: CTTTTTGTGAAGTATGTGCCAGGACATGTTTCTTGA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
3UTR-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAGAAATGAACAGCAGTaGCATCCTTTCAACAGAATC +
Preference number: 2 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPRNEQQ*HPFNRI
Trigger: GATTCTGTTGAAAGGATGTCACTGCTGTTCATTTCT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGGATTGTGTCAACCCTaGCAGAAATGGCAGATAGAA +
Preference number: 2 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQGLCQP*QKWQIE
Trigger: TTCTATCTGCCATTTCTGTCAGGGTTGACACAATCC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAAAGTTTGTCGACCTaGTGCAAAGTTTGGGATTCA +
Preference number: 2 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKSLST*CKVWDS
Trigger: TGAATCCCAAACTTTGCACCAGGTCGACAAACTTTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGGTGACAGACATTTTTaGACCGTAATTGGTACTGTT +
Preference number: 2 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDGDRHF*TVIGTV
Trigger: AACAGTACCAATTACGGTTCAAAAATGTCTGTCACC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGCTTTTCAGCATTTATaGTGTGTGAGTGATAACCCA +
Preference number: 2 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQAFQHL*CVSDNP
Trigger: TGGGTTATCACTCACACATCATAAATGCTGAAAAGC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR GCA 72 bp GTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTaGATTCCAGGGTTACGTCTTCTGGGTTTCCATCCT +
Preference number: 3 (lower is better)
Translates to: VSDNPGGNGCRP*IPGLRLLGFHP
Trigger: AGGATGGAAACCCAGAAGACGTAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGCGAGTCTGCATGGTTaGTATAATAGAGGCTTGGCA +
Preference number: 3 (lower is better)
Translates to: KSTDASATHPRSTESESLASLHG*YNRGLA
Trigger: TGCCAAGCCTCTATTATACAAACCATGCAGACTCGC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCCCTGGGGTAATACATaGTTTTCAGGCAGAATAAGT +
Preference number: 3 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSPWGNT*FSGRIS
Trigger: ACTTATTCTGCCTGAAAACAATGTATTACCCCAGGG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCACAATCTTTTACTGTaGGGCCCTGGGGTAATACAT +
Preference number: 3 (lower is better)
Translates to: TLEHLEALKSTDASATHPHNLLL*GPGVIH
Trigger: ATGTATTACCCCAGGGCCCAACAGTAAAAGATTGTG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATATGGTTGGCAAACTTaGTCTAGGAGTTGGTCAGTC +
Preference number: 3 (lower is better)
Translates to: KSTDASATHPRSTESESLYGWQT*SRSWSV
Trigger: GACTGACCAACTCCTAGACAAAGTTTGCCAACCATA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR TCA 72 bp CTCAACATTAGAACACCTGGAAGCTTTAAAAAGTACTaGTGCCTCAGCCACACACCCCAGATCAACCGAATC +
Preference number: 3 (lower is better)
Translates to: LNIRTPGSFKKY*CLSHTPQINRI
Trigger: GATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAATGGGTGCAGACCTaGCATTCCAGGGTTACGTCT +
Preference number: 3 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKWVQT*HSRVTS
Trigger: AGACGTAACCCTGGAATGCAAGGTCTGCACCCATTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACCCTGGGGTAATACATaGTTTTCAGGCAGAATAAGT +
Preference number: 3 (lower is better)
Translates to: KSTDASATHPRSTESESLPWGNT*FSGRIS
Trigger: ACTTATTCTGCCTGAAAACAATGTATTACCCCAGGG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR GCA 72 bp ACAGAGTTCTGGGCAGAAGCCATACAGGCTTCTGTCTaGCCTAAGCTATGGAGTCAAAATGTAAATGATTCA +
Preference number: 3 (lower is better)
Translates to: TEFWAEAIQASV*PKLWSQNVNDS
Trigger: TGAATCATTTACATTTTGACTCCATAGCTTAGGGCAGACAGAAGCCTGTATGGCTTCTGCCCAGAACTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGTGTAAGTTATGTGTaGCCTTGTCAAAAAGTTTGG +
Preference number: 3 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSCVSYV*PCQKVW
Trigger: CCAAACTTTTTGACAAGGCAACACATAACTTACACA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR TCA 72 bp GGTCAGTCTGAGGAGCTGCTCTCTCACAGAGCTAGATaGAATCTCAATACCCAAAAAGTCCACAATCTTTTA +
Preference number: 3 (lower is better)
Translates to: GQSEELLSHRAR*NLNTQKVHNLL
Trigger: TAAAAGATTGTGGACTTTTTGGGTATTGAGATTTCATCTAGCTCTGTGAGAGAGCAGCTCCTCAGACTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGTGTAAGTTATGTGTaGCCTTGTCAAAAAGTTTGG +
Preference number: 3 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQCVSYV*PCQKVW
Trigger: CCAAACTTTTTGACAAGGCAACACATAACTTACACA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAACAGTAGTTTCCATTaGAAATGTGCTAGGTTGAAG +
Preference number: 3 (lower is better)
Translates to: KSTDASATHPRSTESESLNSSFH*KCARLK
Trigger: CTTCAACCTAGCACATTTCAAATGGAAACTACTGTT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTTACTTTACAAGTTTTaGCCTGTCTCTGGTTGTAGA +
Preference number: 3 (lower is better)
Translates to: TLEHLEALKSTDASATHPLLYKF*PVSGCR
Trigger: TCTACAACCAGAGACAGGCAAAAACTTGTAAAGTAA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTACTGGCCTGTGCTTTaGACACTTATGGTTGGCAAA +
Preference number: 3 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTYWPVL*TLMVGK
Trigger: TTTGCCAACCATAAGTGTCAAAAGCACAGGCCAGTA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR CCA 72 bp AATCATGCTATTAGAAGCTGTAAGTCACAGAGGTCATaGGACTTCCAAAATATTGCGGTACTAGTAAGGCCA +
Preference number: 3 (lower is better)
Translates to: NHAIRSCKSQRS*DFQNIAVLVRP
Trigger: TGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGTGACTTACAGCTTCTAATAGCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
3UTR-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAACCTTCAGAAAAGTTaGTCGACCTGGTGCAAAGTT +
Preference number: 3 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTNLQKS*STWCKV
Trigger: AACTTTGCACCAGGTCGACAAACTTTTCTGAAGGTT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTTGAAATGTGCTAGGTaGAAGATGTCAGTATTCTCT +
Preference number: 3 (lower is better)
Translates to: TESESLEASLHGLYNRGLLKCAR*KMSVFS
Trigger: AGAGAATACTGACATCTTCAACCTAGCACATTTCAA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTTGAAATGTGCTAGGTaGAAGATGTCAGTATTCTCT +
Preference number: 3 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLLKCAR*KMSVFS
Trigger: AGAGAATACTGACATCTTCAACCTAGCACATTTCAA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR GCA 72 bp TTTCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTaGATACTGAGAATCTCCAATAGCATGAGGGCATTT +
Preference number: 3 (lower is better)
Translates to: FLTMLFGVSVTG*ILRISNSMRAF
Trigger: AAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
3UTR-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAACCTTCAGAAAAGTTaGTCGACCTGGTGCAAAGTT +
Preference number: 3 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVNLQKS*STWCKV
Trigger: AACTTTGCACCAGGTCGACAAACTTTTCTGAAGGTT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTATAGAACCTTCAGCCTaGTCAAAAAGTTTGGTAAGT +
Preference number: 3 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPIEPSA*SKSLVS
Trigger: ACTTACCAAACTTTTTGACAAGGCTGAAGGTTCTAT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR TCA 72 bp ATTAGAATAACTATTCTTGCAGGATTGTGTCAACCCTaGCAGAAATGGCAGATAGAAATGAACAGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: IRITILAGLCQP*QKWQIEMNSSD
Trigger: GTCACTGCTGTTCATTTCTATCTGCCATTTCTGTCAGGGTTGACACAATCCTGCAAGAATAGTTATTCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR GCA 72 bp AACTGTATTCTTAGAAGAGTCCACCAAGGATTAGGATaGAAGTTTGTGACCACTCCTTTCCTATATACCTTA +
Preference number: 3 (lower is better)
Translates to: NCILRRVHQGLG*KFVTTPFLYTL
Trigger: TAAGGTATATAGGAAAGGAGTGGTCACAAACTTGCATCCTAATCCTTGGTGGACTCTTCTAAGAATACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR GCA 72 bp TGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTaGAAACTCATTTGCTCAGAGAACACAGTGAATAAT +
Preference number: 3 (lower is better)
Translates to: CILRISNSMRAF*KLICSENTVNN
Trigger: ATTATTCACTGTGTTCTCTGAGCAAATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
3UTR-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAACAGTAGTTTCCATTaGAAATGTGCTAGGTTGAAG +
Preference number: 3 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDNSSFH*KCARLK
Trigger: CTTCAACCTAGCACATTTCAAATGGAAACTACTGTT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR GCA 72 bp CTTGGACTATGTTTTATTTACCGGTGTGTTCATGGATaGCAGCATGATTTTTACATCAGTATATGGTACCAT +
Preference number: 3 (lower is better)
Translates to: LGLCFIYRCVHG*QHDFYISIWYH
Trigger: ATGGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAATAAAACATAGTCCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATAGAACCTTCAGCCTaGTCAAAAAGTTTGGTAAGT +
Preference number: 3 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQIEPSA*SKSLVS
Trigger: ACTTACCAAACTTTTTGACAAGGCTGAAGGTTCTAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR GCA 72 bp GGCGAGAAATATATATTTCGTATTTTCTACAGTCACTaGCAGATGTGCACAATTATTTCAGATGCTTTTGTT +
Preference number: 3 (lower is better)
Translates to: GEKYIFRIFYSH*QMCTIISDAFV
Trigger: AACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGTAGAAAATACGAAATATATATTTCTCGCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGGGTGGACCCGCGGGTaGCTGCCAGGGCAACGGCAA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRGWTRG*LPGQRQ
Trigger: TTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCC...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCGCTGTGCCAAAGGGTaGACCCGCGGGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSRCAKG*TRGWLP
Trigger: TGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGTACAGGGGAGGGCTaGGTCAGGAGGGCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSTGEG*VRRASH
Trigger: GTGGCTTGCCCTCCTGACTCAGCCCTCCCCTGTACT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGACCCGCGGGTGGCTaGCAGGGCAACGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLGPAGG*QGNGNV
Trigger: CACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAGGACCCGCGGGTGGCTaGCAGGGCAACGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAGPAGG*QGNGNV
Trigger: CACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCC...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACCTCTGGAGGAAGCATaGCCTGAGGCTCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLPLEEA*PEAPHR
Trigger: GCGATGGGGAGCCTCAGGGCATGCTTCCTCCAGAGG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGAGGGCATGCGGGGTaGACGGGTGCTGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLRGHAG*TGAVLT
Trigger: AGTGAGGACAGCACCCGTCCACCCCGCATGCCCTCT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGAACGTGGGGGCTCTaGGACCTTCTGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLGTWGL*DLLVGL
Trigger: CAGCCCCACCAGAAGGTCTCAGAGCCCCCACGTTCC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGGAGAGGACAGTCCTaGGGGTGGGGCAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSWRGQS*GWGRMG
Trigger: ACCCATCCTGCCCCACCCTCAGGACTGTCCTCTCCA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCTTCCCACCTCACGTaGGCTTTCCGGGATCCCTGT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLASHLT*AFRDPC
Trigger: ACAGGGATCCCGGAAAGCCCACGTGAGGTGGGAAGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTGCACTTAGGGCTGTaGTGCTTGGTGGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLHLGL*CLVAGC
Trigger: GCATCCTGCCACCAAGCATCACAGCCCTAAGTGCAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCTGTCCACAGAGGCTaGGGCGCCGAGTGTGCACAA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSVHRG*GAECAQ
Trigger: TTGTGCACACTCGGCGCCTCAGCCTCTGTGGACAGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATGGAGAGGACAGTCCTaGGGGTGGGGCAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLWRGQS*GWGRMG
Trigger: ACCCATCCTGCCCCACCCTCAGGACTGTCCTCTCCA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGAAGGAGGCCGTCCTTaGGGCCAGCGTCCCGATTTG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLEGGRP*GQRPDL
Trigger: CAAATCGGGACGCTGGCCTCAAGGACGGCCTCCTTC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGTACAGGGGAGGGCTaGGTCAGGAGGGCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSTGEG*VRRASH
Trigger: GTGGCTTGCCCTCCTGACTCAGCCCTCCCCTGTACT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGTCACCACAGGTGGCTaGACCCCAGCAGGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQVTTGG*TPAGRE
Trigger: CTCACGACCTGCTGGGGTGCAGCCACCTGTGGTGAC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACTCGGAAGCCGTACTaGCCACCTCGTTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTRKPY*PPRCVP
Trigger: TGGCACACAACGAGGTGGGCAGTACGGCTTCCGAGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCGCTGTGCCAAAGGGTaGACCCGCGGGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRCAKG*TRGWLP
Trigger: TGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCTTTGGGGAGGGGCCTaGGCTGTGGTCACTGTAATG +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRLWGGA*AVVTVM
Trigger: CATTACAGTGACCACAGCCCAGGCCCCTCCCCAAAG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATTCACCACCAGTGGCTaGTCTCCGGACTCCGATGCA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLFTTSG*SPDSDA
Trigger: TGCATCGGAGTCCGGAGACCAGCCACTGGTGGTGAA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAGAGGGCATGCGGGGTaGACGGGTGCTGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPRGHAG*TGAVLT
Trigger: AGTGAGGACAGCACCCGTCCACCCCGCATGCCCTCT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGTGGGCTTTGGGGGCTaGCACGCCTTCGGGTATGTC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQVGFGG*HAFGYV
Trigger: GACATACCCGAAGGCGTGCCAGCCCCCAAAGCCCAC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAATATGAGTGGGCTTTaGGGGCTGGCACGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLNMSGL*GLARLR
Trigger: CCGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCCCTTCCGGTGCCCCTaGGAGTGTCCATACAGTCTG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSPFRCP*ECPYSL
Trigger: CAGACTGTATGGACACTCCCAGGGGCACCGGAAGGG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGAACAGCTCTGGACTTaGGATCCCTTCCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSEQLWT*DPFRCP
Trigger: GGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCACTGTCACCACAGGTaGCTGCACCCCAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQHCHHR*LHPSRS
Trigger: CGACCTGCTGGGGTGCAGCCACCTGTGGTGACAGTG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGTGCACAACCTGCTCTaGTGCAGGCCTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSVHNLL*CRPPGS
Trigger: TGACCCTGGAGGCCTGCACCAGAGCAGGTTGTGCAC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGACAGGCACTGGCCACTaGTTGGGTCACAAATGGTCC +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRTGTGH*LGHKWS
Trigger: GGACCATTTGTGACCCAATCAGTGGCCAGTGCCTGT...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATGGTGTCAGTGTGGATaGGACCTTTCCCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLWCQCG*DLSQPA
Trigger: GGCAGGTTGGGAAAGGTCTCATCCACACTGACACCA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGCCTCTGGGCGGAGGTTaGTGGAATGGAGTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRPLGGG*WNGVLL
Trigger: CAGCAAAACTCCATTCCAGCAACCTCCGCCCAGAGG...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATGGGATCCCTTCCGGTaGCCCTGGGAGTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLWDPFR*PWECPY
Trigger: GTATGGACACTCCCAGGGGCACCGGAAGGGATCCCA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGCTTGGTGGCAGGATaGTCTCCGGAACTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSCLVAG*SPELLG
Trigger: CCCAAGGAGTTCCGGAGAGCATCCTGCCACCAAGCA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCGAGTGTGCACAACCTaGTCTGGTGCAGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQRVCTT*SGAGLQ
Trigger: CTGGAGGCCTGCACCAGAGCAGGTTGTGCACACTCG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCTGAGGCGCCGAGTGTaGACAACCTGCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPLRRRV*TTCSGA
Trigger: TGCACCAGAGCAGGTTGTGCACACTCGGCGCCTCAG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGGCCATGGAGAGTCTaGTGGGTGGCCATGCCTTCG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQRPWRV*WVAMPS
Trigger: CGAAGGCATGGCCACCCAGCAGACTCTCCATGGCCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCCAAGGCTGGCTTTCTaGCCCAGCCCCGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSPRLAF*PSPVYF
Trigger: AAAGTACACGGGGCTGGGGCAGAAAGCCAGCCTTGG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGGGTGGACCCGCGGGTaGCTGCCAGGGCAACGGCAA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDGWTRG*LPGQRQ
Trigger: TTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCACTGGCCACTGATTaGGTCACAAATGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLALATD*VTNGPR
Trigger: CCTGGGACCATTTGTGACCCAATCAGTGGCCAGTGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGCACTGGCCACTGATTaGGTCACAAATGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRALATD*VTNGPR
Trigger: CCTGGGACCATTTGTGACCCAATCAGTGGCCAGTGC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGGCACACACAGGCACTaGCCACTGATTGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRGTHRH*PLIGSQ
Trigger: TTGTGACCCAATCAGTGGCCAGTGCCTGTGTGTGCC...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCTCCCCATCGCAAGTaGTTGCATGAAGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLAPHRK*LHEVLH
Trigger: GTGCAGGACTTCATGCAACCACTTGCGATGGGGAGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTACCTTGCTACTGGTaGCACAGCCAGCAACCGTGC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLPCYW*HSQQPC
Trigger: GCACGGTTGCTGGCTGTGCCACCAGTAGCAAGGTAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACCCCATGGGCGCTGCTaGAGAACAGCCTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLPHGRC*RTACRD
Trigger: GTCTCTACAGGCTGTTCTCCAGCAGCGCCCATGGGG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCCATGGAGAGTCTGCTaGGTGGCCATGCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSPWRVC*VAMPSD
Trigger: ATCCGAAGGCATGGCCACCCAGCAGACTCTCCATGG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTCTCAGCTTGTATGTaGTGTAGGGCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLSACM*CRAGDP
Trigger: GGGGTCTCCAGCCCTACACCACATACAAGCTGAGAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGCAGCAGCAGAGCTGTaGCAAAAAGTGCTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRAAAEL*QKVLRS
Trigger: AGACCGAAGCACTTTTTGTCACAGCTCTGCTGCTGC...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAATCCATTCTGGCACTaGTTGCACTGCCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLNPFWH*LHCLPD
Trigger: GTCTGGCAGGCAGTGCAATCAGTGCCAGAATGGATT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGGTGTCAGTGTGGATaGGACCTTTCCCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSWCQCG*DLSQPA
Trigger: GGCAGGTTGGGAAAGGTCTCATCCACACTGACACCA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCAGGAATTTCGGGGATaGGGATCCCTGGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSQEFRG*GSLVVS
Trigger: GGATACCACCAGGGATCCTCATCCCCGAAATTCCTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACAGCCTCCAGAGTTGTaGTGCTGGTGGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLQPPEL*CWWVCW
Trigger: CCAGCAAACCCACCAGCATCACAACTCTGGAGGCTG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGGAGGGCTGACTTCTaGTGGAGCAGCCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQWRADF*WSSLQS
Trigger: ACTCTGGAGGCTGCTCCATCAGAAGTCAGCCCTCCA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGAATGTCCAGTCACTTaGTGCACATCCCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLECPVT*CTSQGG
Trigger: ACCACCCTGGGATGTGCATCAAGTGACTGGACATTC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGGAACGTGGGGGCTCTaGGACCTTCTGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPGTWGL*DLLVGL
Trigger: CAGCCCCACCAGAAGGTCTCAGAGCCCCCACGTTCC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGGCTGGTTTGGTTTTaGCTCGGGATGCGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSRLVWF*LGMRRT
Trigger: TGTCCTGCGCATCCCGAGTCAAAACCAAACCAGCCT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCAGGCCCACGCCACTTaGCAGCAATACTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRQAHAT*QQYFEA
Trigger: TGCTTCAAAGTATTGCTGGCAAGTGGCGTGGGCCTG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGTGGGAGTCCACATACTaGTTGGGTTGGCACGATGGA +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRWESTY*LGWHDG
Trigger: TCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCA...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTAATGCAGTACCGCTGTaGCAAAGGGTGGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLINAVPL*QRVDPR
Trigger: CCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGCGGGGTGGACGGGTaGTGTCCTCACTATAGGCTT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQCGVDG*CPHYRL
Trigger: AAGCCTATAGTGAGGACAGCACCCGTCCACCCCGCA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGACCTGTGACCGTATaGTGTCTCCTGTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLRPVTV*CLLSVV
Trigger: CACCACTGACAGGAGACAGCATACGGTCACAGGTCT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGAGACCTTCTGGAGGTaGTTGCAATGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLETFWR*LQCPHH
Trigger: GTGGTGAGGACATTGCAAGCACCTCCAGAAGGTCTC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGGGCTGGCCCGGTTCTaGACCATGTCCAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLGLARF*TMSSYW
Trigger: CCAGTAGCTGGACATGGTGCAGAACCGGGCCAGCCC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACTCGGAAGCCGTACTaGCCACCTCGTTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTRKPY*PPRCVP
Trigger: TGGCACACAACGAGGTGGGCAGTACGGCTTCCGAGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACGCTGTAGAACTCTGTaGTTTTGCTCCGCGATCCCT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLRCRTL*FCSAIP
Trigger: AGGGATCGCGGAGCAAAAGCACAGAGTTCTACAGCG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTATGCACTCCGGTTGCTaGGGATACTCACAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSMHSGC*GYSQVS
Trigger: GGACACCTGTGAGTATCCGCAGCAACCGGAGTGCAT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGATGCGCAGGACACATaGACTCCGGTTGCTGCGGAT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLDAQDT*TPVAAD
Trigger: ATCCGCAGCAACCGGAGTGCATGTGTCCTGCGCATC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGGGTGGACCCGCGGGTaGCTGCCAGGGCAACGGCAA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQGWTRG*LPGQRQ
Trigger: TTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCGCTGTGCCAAAGGGTaGACCCGCGGGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLRCAKG*TRGWLP
Trigger: TGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGTTGTTCACTGAGCCATaGAGGTTACACTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRLFTEP*RLHWQG
Trigger: GCCCTGCCAGTGTAACCTCCATGGCTCAGTGAACAA...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGGATTTGGCTACTGGTaGCTGAACCTCTTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSGFGYW*LNLLWG
Trigger: GCCCCACAAGAGGTTCAGCCACCAGTAGCCAAATCC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCAGGTGAATATGAGTaGGCTTTGGGGGCTGGCACG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSGEYE*ALGAGT
Trigger: CGTGCCAGCCCCCAAAGCCCACTCATATTCACCTGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGCTTCCCACCTCACGTaGGCTTTCCGGGATCCCTGT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLASHLT*AFRDPC
Trigger: ACAGGGATCCCGGAAAGCCCACGTGAGGTGGGAAGC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGAAGACTGGTTGGAGTaGCAGATGAAAGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLEDWLE*QMKAWE
Trigger: CTCCCAGGCTTTCATCTGCCACTCCAACCAGTCTTC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCCTTCCGGTGCCCCTaGGAGTGTCCATACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLPFRCP*ECPYSL
Trigger: CAGACTGTATGGACACTCCCAGGGGCACCGGAAGGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCACTGTCACCACAGGTaGCTGCACCCCAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLHCHHR*LHPSRS
Trigger: CGACCTGCTGGGGTGCAGCCACCTGTGGTGACAGTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACGTCGATGGCTGTGTaGTTAAGGACACTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTSMAV*LRTLAV
Trigger: CACTGCGAGTGTCCTTAACCACACAGCCATCGACGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATCTGGTTTCCTGAGGTaGAGTACGGCATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSGFLR*STAFCH
Trigger: GTGGCAGAATGCCGTACTCCACCTCAGGAAACCAGA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGGCTTCCATAGATGCTaGGCAGAGGATCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSGFHRC*AEDPAL
Trigger: GAGTGCAGGATCCTCTGCCCAGCATCTATGGAAGCC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTGGTGGGTTTGCTGGTaGAGCATCCTCCACTCGTGC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPWWVCW*SILHSC
Trigger: GCACGAGTGGAGGATGCTCCACCAGCAAACCCACCA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTGCTGGTGGGTTTGCTaGTGGAGCATCCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPCWWVC*WSILHS
Trigger: CGAGTGGAGGATGCTCCACCAGCAAACCCACCAGCA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGGAGAGTCTGCTGGGTaGCCATGCCTTCGGATAGCA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPGESAG*PCLRIA
Trigger: TGCTATCCGAAGGCATGGCCACCCAGCAGACTCTCC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGCTGTCCACCGAAAATaGGGCTCGGTACTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSAVHRK*GSVLRQ
Trigger: TTGCCTCAGTACCGAGCCCCATTTTCGGTGGACAGC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATCGGTATGTAGAGGGTaGTGTCCAAGCCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSVCRG*CPSRCT
Trigger: TGTACAGCGGCTTGGACACCACCCTCTACATACCGA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATACAGTCCACTGTTGTaGCCCATGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLYSPLL*PMMASH
Trigger: GTGGGAAGCCATCATGGGCCACAACAGTGGACTGTA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGCAGCAGCAGAGCTGTaGCAAAAAGTGCTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSAAAEL*QKVLRS
Trigger: AGACCGAAGCACTTTTTGTCACAGCTCTGCTGCTGC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCGCTGGGTACAGAACTaGATACTTTCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRRWVQN*ILSAAA
Trigger: TGCTGCTGCTGAAAGTATTCAGTTCTGTACCCAGCG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGCTACTGAGGCCTGCTaGGAAAAGGGCAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLATEAC*EKGSVG
Trigger: ACCTACACTGCCCTTTTCTCAGCAGGCCTCAGTAGC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGCTACTGAGGCCTGCTaGGAAAAGGGCAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQATEAC*EKGSVG
Trigger: ACCTACACTGCCCTTTTCTCAGCAGGCCTCAGTAGC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAACCAGTTGTATGGCATaGGCATGGCAGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRATSCMA*AWQAAS
Trigger: ACTGGCTGCCTGCCATGCTCATGCCATACAACTGGT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGTGGCCTGTGACCAAGTaGCAGGTTTCATTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRWPVTK*QVSFKA
Trigger: AGCCTTGAATGAAACCTGTCACTTGGTCACAGGCCA...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGGCCGATTCTACAAATaGATGAGGACTGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRGRFYK*MRTEPT
Trigger: GGTTGGCTCAGTCCTCATTCATTTGTAGAATCGGCC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTTCTCCCGTTCTTTCTaGGACCCAGGCAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSFSRSF*DPGRRH
Trigger: GTGTCTTCTGCCTGGGTCTCAGAAAGAACGGGAGAA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCTGCACTTAGGGCTGTaGTGCTTGGTGGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLHLGL*CLVAGC
Trigger: GCATCCTGCCACCAAGCATCACAGCCCTAAGTGCAG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGATGGCTGGAGACCTGTaGCCGTATGCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQMAGDL*PYAVSC
Trigger: ACAGGAGACAGCATACGGTCACAGGTCTCCAGCCAT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATGGCTGGAGACCTGTaGCCGTATGCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLMAGDL*PYAVSC
Trigger: ACAGGAGACAGCATACGGTCACAGGTCTCCAGCCAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATGGAGTTACAGGCTCTaGCCCGATATTCGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLWSYRL*PDIRRV
Trigger: CACTCTACGAATATCGGGTCAGAGCCTGTAACTCCA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCACAGACTCTCCACTaGACCCTTGGAGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPPQTLH*TLGVTG
Trigger: GCCTGTAACTCCAAGGGTTCAGTGGAGAGTCTGTGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTGGAGGGCTGACTTCTaGTGGAGCAGCCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLWRADF*WSSLQS
Trigger: ACTCTGGAGGCTGCTCCATCAGAAGTCAGCCCTCCA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCATTTGAGTGGCACTaGCGGCCCAAAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSFEWH*RPKDLE
Trigger: CTCCAGATCTTTGGGCCGTCAGTGCCACTCAAATGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCACTGTTGTGGCCCATaGTGGCTTCCCACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPHCCGP*WLPTVS
Trigger: ACTCACTGTGGGAAGCCATCATGGGCCACAACAGTG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGGAGTTGGTCAGTCTaGGGAGCTGCTCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQRSWSV*GAALSQ
Trigger: CTGTGAGAGAGCAGCTCCTCAGACTGACCAACTCCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAGGAGTTGGTCAGTCTaGGGAGCTGCTCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPRSWSV*GAALSQ
Trigger: CTGTGAGAGAGCAGCTCCTCAGACTGACCAACTCCT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATAAGGGAGAAGGGGTaGGCCAAGGAGCATAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPIREKG*AKEHSP
Trigger: GGGACTATGCTCCTTGGCTCACCCCTTCTCCCTTAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGCTCAGAGCGTGGTCTaGTTGGTGGCCCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLAQSVV*LVALLE
Trigger: TTCCAAGAGGGCCACCAAGCAGACCACGCTCTGAGC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGTGCAGTTACAGGGACTaGAGCCATCAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRCSYRD*SHQDPT
Trigger: AGTTGGATCCTGATGGCTGCAGTCCCTGTAACTGCA...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGGCTTGCAGATGCACTaGCCTGTCTTAGCATTACAG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLGLQMH*PVLALQ
Trigger: CTGTAATGCTAAGACAGGGCAGTGCATCTGCAAGCC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGACATCCAAGTGGCTTaGACTGGGAACACAAGCATC +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRDIQVA*TGNTSI
Trigger: GATGCTTGTGTTCCCAGTGCAAGCCACTTGGATGTC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCTCTGGGCGGAGGTTaGTGGAATGGAGTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPLGGG*WNGVLL
Trigger: CAGCAAAACTCCATTCCAGCAACCTCCGCCCAGAGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTGGCCTCACTCACTGTaGACCCACCACCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLWPHSL*THHLCK
Trigger: CTTGCACAGGTGGTGGGTGCACAGTGAGTGAGGCCA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATTAGGGCGAAAAGGTaGTTCCCACCTCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLIRAKR*FPPHVG
Trigger: GCCCACGTGAGGTGGGAAGCACCTTTTCGCCCTAAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCAAGTGACCTGGACTaGATCGGGTTCCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPPSDLD*IGFQHC
Trigger: ACAGTGCTGGAACCCGATGCAGTCCAGGTCACTTGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCAAGTGACCTGGACTaGATCGGGTTCCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPSDLD*IGFQHC
Trigger: ACAGTGCTGGAACCCGATGCAGTCCAGGTCACTTGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCGAGTGTGCACAACCTaGTCTGGTGCAGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRVCTT*SGAGLQ
Trigger: CTGGAGGCCTGCACCAGAGCAGGTTGTGCACACTCG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGCATCCTCCACTCGTaGAGGCTTGGAGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSILHS*RLGVHS
Trigger: GCTATGCACTCCAAGCCTGCACGAGTGGAGGATGCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCACATGCACTCCGGTTaGTGCGGATACTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQHMHSG*CGYSQV
Trigger: CACCTGTGAGTATCCGCAGCAACCGGAGTGCATGTG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGGTTTTGACTCGGGATaGGCAGGACACATGCACTCC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPGFDSG*AGHMHS
Trigger: GGAGTGCATGTGTCCTGCGCATCCCGAGTCAAAACC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCTGAAGCTCAGAGCGTaGTCTGCTTGGTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLKLRA*SAWWPS
Trigger: AGAGGGCCACCAAGCAGACCACGCTCTGAGCTTCAG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGCAGAGGCATCTATATaGCTGGCTTGTTGTGTCGCA +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRAEASI*LACCVA
Trigger: TGCGACACAACAAGCCAGCCATATAGATGCCTCTGC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCAGAGGCATCTATATaGCTGGCTTGTTGTGTCGCA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLAEASI*LACCVA
Trigger: TGCGACACAACAAGCCAGCCATATAGATGCCTCTGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTTGTTCACTGAGCCATaGAGGTTACACTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLFTEP*RLHWQG
Trigger: GCCCTGCCAGTGTAACCTCCATGGCTCAGTGAACAA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGCACACACAGGCACTaGCCACTGATTGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLGTHRH*PLIGSQ
Trigger: TTGTGACCCAATCAGTGGCCAGTGCCTGTGTGTGCC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAAGGGATTTGGCTACTaGTGGCTGAACCTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLKGFGY*WLNLLW
Trigger: CCACAAGAGGTTCAGCCACCAGTAGCCAAATCCCTT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCAGGACAGTCAGAACTaGGGAATCCACGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSQDSQN*GIHVFW
Trigger: CCAGAACACGTGGATTCCCCAGTTCTGACTGTCCTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGTGGGCTTTGGGGGCTaGCACGCCTTCGGGTATGTC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPVGFGG*HAFGYV
Trigger: GACATACCCGAAGGCGTGCCAGCCCCCAAAGCCCAC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATCGATTTTCCACCAGTaGGCCCAGAGCACAACCTTT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSIFHQ*AQSTTF
Trigger: AAAGGTTGTGCTCTGGGCCCACTGGTGGAAAATCGA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGGCAGCACGCCATCTaGAGCTCCTGGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRQHAI*SSWRHC
Trigger: GCAATGCCTCCAGGAGCTCCAGATGGCGTGCTGCCT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCGCCAGACCTCATCTaGAGTTGGTATCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSPDLI*SWYLGE
Trigger: CTCTCCCAGATACCAACTCCAGATGAGGTCTGGCGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAACCAAGCCATTGGGGTaGGTAGGGGGTTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLTKPLG*VGGCQD
Trigger: ATCTTGGCAACCCCCTACCCACCCCAATGGCTTGGT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGTTTCCAAGTGACCTaGACTGCATCGGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLGFQVT*TASGSS
Trigger: GCTGGAACCCGATGCAGTCCAGGTCACTTGGAAACC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGGTTTCCAAGTGACCTaGACTGCATCGGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQGFQVT*TASGSS
Trigger: GCTGGAACCCGATGCAGTCCAGGTCACTTGGAAACC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGGCTGTGATGCTTGGTaGCAGGATGCTCTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLGCDAW*QDALRN
Trigger: GTTCCGGAGAGCATCCTGCCACCAAGCATCACAGCC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGCCAGCTGAGAGTCTaGAGGGGCTTCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSQLRV*RGFICP
Trigger: TGGACAGATGAAGCCCCTCCAGACTCTCAGCTGGCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCTGAGACCTTCTGGTaGGGCTGGCCCGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSETFW*GWPGSA
Trigger: TGCAGAACCGGGCCAGCCCCACCAGAAGGTCTCAGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGCTCTGAGACCTTCTaGTGGGGCTGGCCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGSETF*WGWPGS
Trigger: AGAACCGGGCCAGCCCCACCAGAAGGTCTCAGAGCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGGGAGTAGGTTAGGCTaGTTTGGTTTTGACTCGGGA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLGSRLG*FGFDSG
Trigger: TCCCGAGTCAAAACCAAACCAGCCTAACCTACTCCC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCAGTCCCCTCAGTGTaGCAAATGGCTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPVPSV*QMALQQ
Trigger: CTGTTGAAGAGCCATTTGTCACACTGAGGGGACTGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGAAGCCAGAGCCCAATaGAAGAACTGGGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLEARAQ*KNWAIH
Trigger: ATGAATTGCCCAGTTCTTTCATTGGGCTCTGGCTTC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGCAGCAGCAGAGCTGTaGCAAAAAGTGCTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQAAAEL*QKVLRS
Trigger: AGACCGAAGCACTTTTTGTCACAGCTCTGCTGCTGC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTGTATGGGCAATCCTaGATACAAAACCGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLYGQS*IQNRWV
Trigger: TACCCAGCGGTTTTGTATTCAGGATTGCCCATACAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGCATTGAAAGGTGTATaGTCCTTCTCCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRALKGV*SFSTPL
Trigger: CAATGGCGTGGAGAAGGATCATACACCTTTCAATGC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCATTGAAAGGTGTATaGTCCTTCTCCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLALKGV*SFSTPL
Trigger: CAATGGCGTGGAGAAGGATCATACACCTTTCAATGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGGGCAACGGCAATGTaGTTGGGCATGCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQRATAM*LGMQSE
Trigger: CTCAGATTGCATGCCCAATCACATTGCCGTTGCCCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACTCCTCCTCCCCCTCTaGAGTGCTCAAAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLLLPL*SAQKEM
Trigger: CATTTCCTTTTGAGCACTTCAGAGGGGGAGGAGGAG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCACTTGCACTGGCCTaGATTTTGGTGACAGGTAAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLALALA*ILVTGN
Trigger: ATTACCTGTCACCAAAATTCAGGCCAGTGCAAGTGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGCAGAATTTGTTCACTaGGCCATGGAGGTTACACTG +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRAEFVH*AMEVTL
Trigger: CAGTGTAACCTCCATGGCTCAGTGAACAAATTCTGC...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGACAGGCACTGGCCACTaGTTGGGTCACAAATGGTCC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLTGTGH*LGHKWS
Trigger: GGACCATTTGTGACCCAATCAGTGGCCAGTGCCTGT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGTTACACCTTCTTCCTTaGCGATTAGGCACACACAGG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRLHLLP*RLGTHR
Trigger: CCTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAA...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGCTACACTCCTTGTTaGACCATGCACATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSYTPC*TMHIGG
Trigger: ACCACCAATGTGCATGGTTCAACAAGGAGTGTAGCT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGAGCTACACTCCTTGTTaGACCATGCACATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRSYTPC*TMHIGG
Trigger: ACCACCAATGTGCATGGTTCAACAAGGAGTGTAGCT...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGGGACCAGATTGATTTaGGAGTGTTGTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRGTRLI*ECCPGK
Trigger: CTTACCTGGACAACACTCTCAAATCAATCTGGTCCC...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGATGGCTCCAAGCCAGTaGTGGTTGTCATTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRMAPSQ*WLSLFE
Trigger: CTCAAACAATGACAACCATCACTGGCTTGGAGCCAT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTTCTCCCGTTCTTTCTaGGACCCAGGCAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQFSRSF*DPGRRH
Trigger: GTGTCTTCTGCCTGGGTCTCAGAAAGAACGGGAGAA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGAGTGTGCAACAGCTGTaGAAACGCCATGGGAATAGA +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRSVQQL*KRHGNR
Trigger: TCTATTCCCATGGCGTTTTCACAGCTGTTGCACACT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGTGTGCAACAGCTGTaGAAACGCCATGGGAATAGA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSVQQL*KRHGNR
Trigger: TCTATTCCCATGGCGTTTTCACAGCTGTTGCACACT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACCAATCACTATATACTaGACCTCCTTCATGCGAGGC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLPITIY*TSFMRG
Trigger: GCCTCGCATGAAGGAGGTTCAGTATATAGTGATTGG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGTTCTCCTCACTGCCTaGATAGATCAGCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQVLLTA*IDQPPI
Trigger: GATGGGAGGCTGATCTATTCAGGCAGTGAGGAGAAC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGTAGACCAGACAACCTaGAGACTGGTTGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQVDQTT*RLVGVA
Trigger: TGCCACTCCAACCAGTCTTCAGGTTGTCTGGTCTAC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGGTGGCCAATGACATaGGAGTTTACATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLRWPMT*EFTSGK
Trigger: CTTGCCAGATGTAAACTCTCATGTCATTGGCCACCT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCTCTCACAGCTTTGCTaGGTCCTCGCCCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLSQLC*VLAHSC
Trigger: ACAGCTATGGGCGAGGACTCAGCAAAGCTGTGAGAG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCGTACAGGTGGGCTTaGTGGCTTGTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLPYRWA*WLVPFT
Trigger: AGTGAAGGGAACAAGCCATCAAGCCCACCTGTACGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCTGTCCACAGAGGCTaGGGCGCCGAGTGTGCACAA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSVHRG*GAECAQ
Trigger: TTGTGCACACTCGGCGCCTCAGCCTCTGTGGACAGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACAGTAGGAGCCAGCTaGGAGTCTGGAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTVGAS*ESGGAS
Trigger: TGAAGCCCCTCCAGACTCTCAGCTGGCTCCTACTGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCAGCCTCCAGAGTTGTaGTGCTGGTGGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLQPPEL*CWWVCW
Trigger: CCAGCAAACCCACCAGCATCACAACTCTGGAGGCTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAAAGATCTGGAGGGCTaGCTTCTGATGGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPKDLEG*LLMEQP
Trigger: AGGCTGCTCCATCAGAAGTCAGCCCTCCAGATCTTT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCTTTGCTGCAACAGTTaGAGCAGGTGCAGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLCCNS*SRCRPL
Trigger: TAGAGGCCTGCACCTGCTTCAACTGTTGCAGCAAAG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGAGACATCCTCTTCTaGAGAGGTACCAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLGDILF*RGTKGG
Trigger: ACCTCCCTTGGTACCTCTTCAGAAGAGGATGTCTCC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGCGTTCCTTAGTCACTaGGCTGAAATCCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSAFLSH*AEILDG
Trigger: GCCATCAAGGATTTCAGCTCAGTGACTAAGGAACGC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACAGGCCCACGCCACTTaGCAGCAATACTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLQAHAT*QQYFEA
Trigger: TGCTTCAAAGTATTGCTGGCAAGTGGCGTGGGCCTG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGCTGTGACAAAAAGTaGTTCGGTCTGGGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSCDKK*FGLGVH
Trigger: GTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGACCCGCGGGTGGCTaGCAGGGCAACGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGPAGG*QGNGNV
Trigger: CACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAATGCAGTACCGCTGTaGCAAAGGGTGGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPNAVPL*QRVDPR
Trigger: CCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAATGCAGTACCGCTGTaGCAAAGGGTGGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTNAVPL*QRVDPR
Trigger: CCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTTCAACATTGGGCTTaGAGATGCACTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLQHWA*RCTALS
Trigger: AGACAGGGCAGTGCATCTGCAAGCCCAATGTTGAAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCATTGGTCACAACGTTaGCCAGCAATGGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRHWSQR*PAMEAS
Trigger: AGATGCTTCCATTGCTGGGCAACGTTGTGACCAATG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACTGAACCTCCTTCATaGGAGGCTATCACTCGATAC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTEPPS*EAITRY
Trigger: GTATCGAGTGATAGCCTCGCATGAAGGAGGTTCAGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTACCTTTGGCCGTGCATaGTTGGACTCTGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSTFGRA*LDSEGM
Trigger: CATTCCTTCAGAGTCCAAGCATGCACGGCCAAAGGT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGGTTGCATGAAGTCCTaGACTGTTGATGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSGCMKS*TVDAVD
Trigger: GTCCACAGCATCAACAGTGCAGGACTTCATGCAACC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCTCTGGAGGAAGCATaGCCTGAGGCTCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPLEEA*PEAPHR
Trigger: GCGATGGGGAGCCTCAGGGCATGCTTCCTCCAGAGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATGCACTCCGGTTGCTaGGGATACTCACAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLMHSGC*GYSQVS
Trigger: GGACACCTGTGAGTATCCGCAGCAACCGGAGTGCAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGCAGAGGCATCTATATaGCTGGCTTGTTGTGTCGCA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSAEASI*LACCVA
Trigger: TGCGACACAACAAGCCAGCCATATAGATGCCTCTGC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATCAGTGAAGCTCTCCTaGGAGCAGAGGCATCTATAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSVKLS*EQRHLY
Trigger: ATATAGATGCCTCTGCTCCCAGGAGAGCTTCACTGA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCATGGAGGTTACACTaGCAGGGCTCACATCCAACA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPWRLH*QGSHPT
Trigger: TGTTGGATGTGAGCCCTGCCAGTGTAACCTCCATGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTTGTTCACTGAGCCATaGAGGTTACACTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLFTEP*RLHWQG
Trigger: GCCCTGCCAGTGTAACCTCCATGGCTCAGTGAACAA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAGTCTCCCTTCAACATTaGGCTTGCAGATGCACTGCC +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAVSLQH*ACRCTA
Trigger: GGCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGAC...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTCTCCCTTCAACATTaGGCTTGCAGATGCACTGCC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLVSLQH*ACRCTA
Trigger: GGCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACTGCACCAGTTGTATaGCATGAGCATGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTAPVV*HEHGRQ
Trigger: CTGCCTGCCATGCTCATGCCATACAACTGGTGCAGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGAACGTTGCCCAGCAATaGAAGCATCTTGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRNVAQQ*KHLGKH
Trigger: GTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCCAAGTGGCTTGCACTaGGAACACAAGCATCACACT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSPSGLH*EHKHHT
Trigger: AGTGTGATGCTTGTGTTCCCAGTGCAAGCCACTTGG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCTGGGCGGAGGTTGCTaGAATGGAGTTTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPLGGGC*NGVLLQ
Trigger: TTGCAGCAAAACTCCATTCCAGCAACCTCCGCCCAG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCTGGGCGGAGGTTGCTaGAATGGAGTTTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLGGGC*NGVLLQ
Trigger: TTGCAGCAAAACTCCATTCCAGCAACCTCCGCCCAG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCTTTGGGGAGGGGCCTaGGCTGTGGTCACTGTAATG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLLWGGA*AVVTVM
Trigger: CATTACAGTGACCACAGCCCAGGCCCCTCCCCAAAG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCTCATACTTGGTGTATaGCTCCAAGCCAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRLILGV*LQASDG
Trigger: ACCATCACTGGCTTGGAGCCATACACCAAGTATGAG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTGCTCCCGAAGCACTaGTCACACAACCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLLPKH*SHNQLN
Trigger: ATTCAGTTGGTTGTGTGACCAGTGCTTCGGGAGCAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAGGCAGCACGCCATCTaGAGCTCCTGGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPRQHAI*SSWRHC
Trigger: GCAATGCCTCCAGGAGCTCCAGATGGCGTGCTGCCT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTAGAAATCCATGGGTaGAGTCGCCAGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLEIHG*SRQTSS
Trigger: AGATGAGGTCTGGCGACTCCACCCATGGATTTCTAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTCCGTTCTGGATGAGTaGGGGTTTCCAAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPSVLDE*GFPSDL
Trigger: CAGGTCACTTGGAAACCCCCACTCATCCAGAACGGA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGTATGTCTCCGTTCTaGATGAGTGGGGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSMSPF*MSGGFQ
Trigger: TTGGAAACCCCCACTCATCCAGAACGGAGACATACT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGCTCCCCATCGCAAGTaGTTGCATGAAGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLAPHRK*LHEVLH
Trigger: GTGCAGGACTTCATGCAACCACTTGCGATGGGGAGC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGCGATGTCCAGGCTTaGGGTTATAGAGCACTCCGT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSDVQA*GYRALR
Trigger: ACGGAGTGCTCTATAACCCCAAGCCTGGACATCGCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGAGAAACGAGGCCATTaGGCTTTTCTGGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPEKRGH*AFLADS
Trigger: GGAGTCTGCCAGAAAAGCCCAATGGCCTCGTTTCTC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGCAGGCACAGGCCCTaGCCAGCAAGGGACTCTTTA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSRHRP*PARDSL
Trigger: TAAAGAGTCCCTTGCTGGCCAGGGCCTGTGCCTGCT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTCAAAATACCCCCTTaGCTGTTGCTGGCAGTTACT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLKIPP*LLLAVT
Trigger: AGTAACTGCCAGCAACAGCCAAGGGGGTATTTTGAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGTAGAAGAGATCACATaGAACGTGGGGGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSVEEIT*NVGALR
Trigger: TCTCAGAGCCCCCACGTTCCATGTGATCTCTTCTAC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCCCCATGGGCGCTGCTaGAGAACAGCCTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPPHGRC*RTACRD
Trigger: GTCTCTACAGGCTGTTCTCCAGCAGCGCCCATGGGG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTACTGTCTCAGCCCCATaGGCGCTGCTGGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPTVSAP*ALLENS
Trigger: GCTGTTCTCCAGCAGCGCCCATGGGGCTGAGACAGT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACGTACTCCTTCAGTTaGCCGTTCAGGAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTYSFS*PFRRKV
Trigger: CACCTTCCTCCTGAACGGCCAACTGAAGGAGTACGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGGGAGTAGGTTAGGCTaGTTTGGTTTTGACTCGGGA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSGSRLG*FGFDSG
Trigger: TCCCGAGTCAAAACCAAACCAGCCTAACCTACTCCC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATCCATCCTTTACAGGTaGGTGTCTGTGAATGTGGTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSILYR*VSVNVV
Trigger: CACCACATTCACAGACACCCACCTGTAAAGGATGGA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGTAGCTCACAGAAGGTaGACACAGCCTTGGTTAATG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLVAHRR*TQPWLM
Trigger: CATTAACCAAGGCTGTGTCCACCTTCTGTGAGCTAC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAAACACTTGGTTACCTaGAGCTCAGAGCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPKHLVT*SSERGL
Trigger: CAGACCACGCTCTGAGCTTCAGGTAACCAAGTGTTT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCCAGTCCCCTCAGTGTaGCAAATGGCTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIPVPSV*QMALQQ
Trigger: CTGTTGAAGAGCCATTTGTCACACTGAGGGGACTGG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGCAATGGCGAAGACATaGGTAGCTGCTGGTATCATT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSAMAKT*VAAGII
Trigger: AATGATACCAGCAGCTACTCATGTCTTCGCCATTGC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCGATGGAAACTTTCTTaGAAGCTCCCACGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSRWKLS*KLPRSP
Trigger: TGGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCGCTGGGTACAGAACTaGATACTTTCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPRWVQN*ILSAAA
Trigger: TGCTGCTGCTGAAAGTATTCAGTTCTGTACCCAGCG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAAATGAAGTCCTTCAGTaGAGCTCTCCTGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRANEVLQ*SSPGSR
Trigger: TCTGCTCCCAGGAGAGCTTCACTGAAGGACTTCATT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGCACTGTCCTCCAATCTaGTCACAAAGAATGCTACCA +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRHCPPI*SQRMLP
Trigger: TGGTAGCATTCTTTGTGATCAGATTGGAGGACAGTG...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTAATCCATTCTGGCACTaGTTGCACTGCCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLINPFWH*LHCLPD
Trigger: GTCTGGCAGGCAGTGCAATCAGTGCCAGAATGGATT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCTTGGCAAACACACTaGCCAGTCAGGCTATTACAG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSWQTH*PVRLLQ
Trigger: CTGTAATAGCCTGACTGGTCAGTGTGTTTGCCAAGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTGGCCTGTGACCAAGTaGCAGGTTTCATTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPWPVTK*QVSFKA
Trigger: AGCCTTGAATGAAACCTGTCACTTGGTCACAGGCCA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGAAACACTGGCCTGTaGCCAAGTGACAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSRNTGL*PSDRFH
Trigger: ATGAAACCTGTCACTTGGTCACAGGCCAGTGTTTCT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAACCCAATAGATTGTTaGCATCCAAGTGGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLNPIDC*HPSGLH
Trigger: GTGCAAGCCACTTGGATGTCAACAATCTATTGGGTT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTGAAGGAGGGATCATaGATACAGGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLKEGS*IQVLIL
Trigger: GAGAATCAGCACCTGTATTCATGATCCCTCCTTCAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCTCCCAGGAGATATTaGGAGAGTACGAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSPRRY*ESTKRG
Trigger: CCCTCTCTTCGTACTCTCTCAATATCTCCTGGGAGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGTCTGTATTGACTGGGTaGGTGGAGCTGGGAAATTTA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRSVLTG*VELGNL
Trigger: TAAATTTCCCAGCTCCACTCACCCAGTCAATACAGA...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGCAAAATACTCTTCCTaGTTGCCAGGTGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSAKYSS*LPGDAA
Trigger: TGCAGCATCACCTGGCAATCAGGAAGAGTATTTTGC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGATAAACCTCATGGAATaGCTCCTCGGGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQINLME*LLGRVT
Trigger: GGTGACTCTCCCGAGGAGTCATTCCATGAGGTTTAT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATAAACCTCATGGAATaGCTCCTCGGGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPINLME*LLGRVT
Trigger: GGTGACTCTCCCGAGGAGTCATTCCATGAGGTTTAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCACCCCAGCAGGTCGTaGGGGTCTTGTGGTAACTTC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTHPSRS*GSCGNF
Trigger: GAAGTTACCACAAGACCCTCACGACCTGCTGGGGTG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATCTTCTGGGGGATTTaGTGCAAGTGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPIFWGI*CKWLLD
Trigger: ATCCAGCAGCCACTTGCATCAAATCCCCCAGAAGAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGGTGGCCAATGACATaGGAGTTTACATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSRWPMT*EFTSGK
Trigger: CTTGCCAGATGTAAACTCTCATGTCATTGGCCACCT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCGCAAGTGGTTGCATaGAGTCCTGCACTGTTGATG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSQVVA*SPALLM
Trigger: CATCAACAGTGCAGGACTTCATGCAACCACTTGCGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCAACATACATTCATTTaGGTGGCACTGACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSQHTFI*VALTAQ
Trigger: TTGGGCCGTCAGTGCCACTCAAATGAATGTATGTTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGCTCAGAGCGTGGTCTaGTTGGTGGCCCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPAQSVV*LVALLE
Trigger: TTCCAAGAGGGCCACCAAGCAGACCACGCTCTGAGC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTGGGAGTCCACATACTaGTTGGGTTGGCACGATGGA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLWESTY*LGWHDG
Trigger: TCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCTATGGGCGTTAGGATaGAGATCATTCTTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRLWALG*RSFLSG
Trigger: ACCAGACAAGAATGATCTGCATCCTAACGCCCATAG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACTGATTGCACTGCCTaGCAGACACGTGTCTCTTAC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPTDCTA*QTRVSY
Trigger: GTAAGAGACACGTGTCTGGCAGGCAGTGCAATCAGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCATTCTGGCACTGATTaGACTGCCTGCCAGACACGT +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIHSGTD*TACQTR
Trigger: ACGTGTCTGGCAGGCAGTGCAATCAGTGCCAGAATG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGCAGTTACAGGGACTaGAGCCATCAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQCSYRD*SHQDPT
Trigger: AGTTGGATCCTGATGGCTGCAGTCCCTGTAACTGCA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCTGTCCCAGAGGTATTaGAGTTACAGGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLILSQRY*SYRDCS
Trigger: GCTGCAGTCCCTGTAACTGCAATACCTCTGGGACAG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACGTTTGCTTTGCACTTaGACTGGCCTGAATTTTGGT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLRLLCT*TGLNFG
Trigger: ACCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGGCAGCCAGTGGCATTaGCTGGAGAAATATAAAAAC +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRGSQWH*LEKYKN
Trigger: GTTTTTATATTTCTCCAGGCAATGCCACTGGCTGCC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCGGACTCCGATGCATaGTTCATCAGTCCATTCACA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPDSDA*FISPFT
Trigger: TGTGAATGGACTGATGAAGCATGCATCGGAGTCCGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTCTCCGGACTCCGATaGATGCTTCATCAGTCCATT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLVSGLR*MLHQSI
Trigger: AATGGACTGATGAAGCATGCATCGGAGTCCGGAGAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGTAGTTCTCCTCACTaGCTGAATAGATCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSCSSPH*LNRSAS
Trigger: GGAGGCTGATCTATTCAGGCAGTGAGGAGAACTACA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACCTTTGGCCGTGCATaGTTGGACTCTGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPTFGRA*LDSEGM
Trigger: CATTCCTTCAGAGTCCAAGCATGCACGGCCAAAGGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATTGGATTTTCTAGGATaGTGCCAGGTGACCAACATC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLDFLG*CQVTNI
Trigger: GATGTTGGTCACCTGGCAGCATCCTAGAAAATCCAA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATGCCTCCATGAAGAGTaGTCATCAGTACCCGATATT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLCLHEE*SSVPDI
Trigger: AATATCGGGTACTGATGAGCACTCTTCATGGAGGCA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGTCACCACAGGTGGCTaGACCCCAGCAGGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVVTTGG*TPAGRE
Trigger: CTCACGACCTGCTGGGGTGCAGCCACCTGTGGTGAC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCCATCGCAAGTGGTTaGATGAAGTCCTGCACTGTT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPIASG*MKSCTV
Trigger: AACAGTGCAGGACTTCATGCAACCACTTGCGATGGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCCATCGCAAGTGGTTaGATGAAGTCCTGCACTGTT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPPIASG*MKSCTV
Trigger: AACAGTGCAGGACTTCATGCAACCACTTGCGATGGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACAGAAACCCGATTGTaGTGTTCATCTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTETRL*CSSGQH
Trigger: ATGCTGTCCAGATGAACAGCACAATCGGGTTTCTGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGCTCACAATCTGTCTaGCACAGCACTTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQCSQSV*HSTSGH
Trigger: ATGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCACAGCCAGCAACCGTaGAAGCTTTCAGCTGATATG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQHSQQP*KLSADM
Trigger: CATATCAGCTGAAAGCTTGCACGGTTGCTGGCTGTG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGACCTTTCCCAACCTaGCTGATCTGGTACTCTTTA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLRPFPT*LIWYSL
Trigger: TAAAGAGTACCAGATCAGGCAGGTTGGGAAAGGTCT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTGAGGCGCCGAGTGTaGACAACCTGCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLRRRV*TTCSGA
Trigger: TGCACCAGAGCAGGTTGTGCACACTCGGCGCCTCAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCAAGAGCTACAGGTATaGCCAGCTGAATTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSQELQV*PAEFQV
Trigger: CACTTGGAATTCAGCTGGGCATACCTGTAGCTCTTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGAGACCTTCTGGAGGTaGTTGCAATGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLETFWR*LQCPHH
Trigger: GTGGTGAGGACATTGCAAGCACCTCCAGAAGGTCTC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGTAATCTTTCCATTTTaGACTGTGGGCGGTGACCAA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLVIFPF*TVGGDQ
Trigger: TTGGTCACCGCCCACAGTGCAAAATGGAAAGATTAC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGCAACCTCCATTCGTaGAGGCTACAAGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQCNLHS*RLQGRS
Trigger: ACTTCTCCCTTGTAGCCTGCACGAATGGAGGTTGCA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTACCCCCTTGGCTGTTaGTGGCAGTTACTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLYPLGC*WQLLCS
Trigger: GCTACACAGTAACTGCCAGCAACAGCCAAGGGGGTA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCACATGCACTCCGGTTaGTGCGGATACTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLHMHSG*CGYSQV
Trigger: CACCTGTGAGTATCCGCAGCAACCGGAGTGCATGTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGATGCGCAGGACACATaGACTCCGGTTGCTGCGGAT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPDAQDT*TPVAAD
Trigger: ATCCGCAGCAACCGGAGTGCATGTGTCCTGCGCATC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGGTTTTGACTCGGGATaGGCAGGACACATGCACTCC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLGFDSG*AGHMHS
Trigger: GGAGTGCATGTGTCCTGCGCATCCCGAGTCAAAACC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGTCAGTCTGAGGAGCTaGTCTCTCACAGAGCTAGAT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPVSLRS*SLTELD
Trigger: ATCTAGCTCTGTGAGAGAGCAGCTCCTCAGACTGAC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGCAGAGCAAACACTTaGTTACCTGAAGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSCRANT*LPEAQS
Trigger: GCTCTGAGCTTCAGGTAACCAAGTGTTTGCTCTGCA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCTTGCAGAATTGCTATaGGCGTTAGGATGCAGATCA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRLAELL*ALGCRS
Trigger: TGATCTGCATCCTAACGCCCATAGCAATTCTGCAAG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCAGTGAAGCTCTCCTaGGAGCAGAGGCATCTATAT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSVKLS*EQRHLY
Trigger: ATATAGATGCCTCTGCTCCCAGGAGAGCTTCACTGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCATGGAGGTTACACTaGCAGGGCTCACATCCAACA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLPWRLH*QGSHPT
Trigger: TGTTGGATGTGAGCCCTGCCAGTGTAACCTCCATGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATGGCAGGCAGCCAGTaGCATTGCCTGGAGAAATAT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPMAGSQ*HCLEKY
Trigger: ATATTTCTCCAGGCAATGCCACTGGCTGCCTGCCAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTCATACTTGGTGTATaGCTCCAAGCCAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLILGV*LQASDG
Trigger: ACCATCACTGGCTTGGAGCCATACACCAAGTATGAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTCCTTTAACCAGAGGTaGCCTCAGTTGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLISFNQR*PQLCWC
Trigger: GCACCAGCACAACTGAGGCCACCTCTGGTTAAAGGA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGTTCCTTTCATCATCGTaGTCATCAGAGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRFLSSS*SSELVE
Trigger: CTCTACCAGCTCTGATGACCACGATGATGAAAGGAA...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGAAGTCTGTATTGACTaGGTGAGTGGAGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSEVCID*VSGAGK
Trigger: TTTCCCAGCTCCACTCACCCAGTCAATACAGACTTC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTCACCACCAGTGGCTaGTCTCCGGACTCCGATGCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTFTTSG*SPDSDA
Trigger: TGCATCGGAGTCCGGAGACCAGCCACTGGTGGTGAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGTTCAGCAGTTCCTGTaGGATTCCTCCCACATAAAC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSVQQFL*DSSHIN
Trigger: GTTTATGTGGGAGGAATCCCACAGGAACTGCTGAAC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAACTGGGAAGGGATTTaGCTACTGGTGGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQNWEGI*LLVAEP
Trigger: AGGTTCAGCCACCAGTAGCCAAATCCCTTCCCAGTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAACTGGGAAGGGATTTaGCTACTGGTGGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPNWEGI*LLVAEP
Trigger: AGGTTCAGCCACCAGTAGCCAAATCCCTTCCCAGTT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTACCATTTGCCTTTTTaGGTGGGTTCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSYHLPF*VGSRRA
Trigger: TGCTCTCCTGGAACCCACCCAAAAAGGCAAATGGTA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCAGGACAGTCAGAACTaGGGAATCCACGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLQDSQN*GIHVFW
Trigger: CCAGAACACGTGGATTCCCCAGTTCTGACTGTCCTG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAATATGAGTGGGCTTTaGGGGCTGGCACGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTNMSGL*GLARLR
Trigger: CCGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTCGCCAGACCTCATCTaGAGTTGGTATCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLSPDLI*SWYLGE
Trigger: CTCTCCCAGATACCAACTCCAGATGAGGTCTGGCGA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAACTCTAGAAATCCATaGGTGGAGTCGCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPNSRNP*VESPDL
Trigger: GAGGTCTGGCGACTCCACCCATGGATTTCTAGAGTT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGTGTCCATACAGTCTaGGACTCTGGTGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSVHTV*DSGERE
Trigger: TTCCCTTTCACCAGAGTCCCAGACTGTATGGACACT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGCAGCACTGATGATTTaGTTGTGCCTCCTGTATTCG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSAALMI*LCLLYS
Trigger: CGAATACAGGAGGCACAACCAAATCATCAGTGCTGC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCAGCACAGCAAATCTaGTTTCCTGAGGTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPAQQI*FPEVEY
Trigger: GTACTCCACCTCAGGAAACCAGATTTGCTGTGCTGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACCAGCACAGCAAATCTaGTTTCCTGAGGTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLPAQQI*FPEVEY
Trigger: GTACTCCACCTCAGGAAACCAGATTTGCTGTGCTGG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTACCTTGCTACTGGTaGCACAGCCAGCAACCGTGC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLPCYW*HSQQPC
Trigger: GCACGGTTGCTGGCTGTGCCACCAGTAGCAAGGTAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCTCTCCGGAACTCCTTaGGTAGTAGCTGCAACTACC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLSGTP*VVAATT
Trigger: GGTAGTTGCAGCTACTACCCAAGGAGTTCCGGAGAG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCAGTGGTGTCAGTGTaGATGAGACCTTTCCCAACC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSVVSV*MRPFPT
Trigger: GGTTGGGAAAGGTCTCATCCACACTGACACCACTGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGAGAAACGAGGCCATTaGGCTTTTCTGGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLEKRGH*AFLADS
Trigger: GGAGTCTGCCAGAAAAGCCCAATGGCCTCGTTTCTC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTTGAGCCCAAGGAGCTaGAAAATCTTGAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPLSPRS*KILRWS
Trigger: GCTCCACCTCAAGATTTTCCAGCTCCTTGGGCTCAA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGGAGAGAGACCTTCTaGAGGTGCTTGCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQWRETF*RCLQCP
Trigger: AGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATGGAGAGAGACCTTCTaGAGGTGCTTGCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLWRETF*RCLQCP
Trigger: AGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTGCTGGTGGGTTTGCTaGTGGAGCATCCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTCWWVC*WSILHS
Trigger: CGAGTGGAGGATGCTCCACCAGCAAACCCACCAGCA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAGCAGGCACAGGCCCTaGCCAGCAAGGGACTCTTTA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSRHRP*PARDSL
Trigger: TAAAGAGTCCCTTGCTGGCCAGGGCCTGTGCCTGCT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCCATTTGGGTTTCTTaGAGGTTTCCAGGTGATTTC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLAIWVS*RFPGDF
Trigger: GAAATCACCTGGAAACCTCCAAGAAACCCAAATGGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATCTGATCTGGCCATTTaGGTTTCTTGGAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSDLAI*VSWRFP
Trigger: TGGAAACCTCCAAGAAACCCAAATGGCCAGATCAGA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGCTATACTCCACACCTaGGGTGAGAGTAAAATCACG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSAILHT*GESKIT
Trigger: CGTGATTTTACTCTCACCCCAGGTGTGGAGTATAGC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATGCACATCCCAGGGTaGTGCACGCTTGAATTCGTA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPMHIPG*CTLEFV
Trigger: TACGAATTCAAGCGTGCACCACCCTGGGATGTGCAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGATGCACATCCCAGGGTaGTGCACGCTTGAATTCGTA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQMHIPG*CTLEFV
Trigger: TACGAATTCAAGCGTGCACCACCCTGGGATGTGCAT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTGGCTGGAATCCTCCTaGAGCCATTTGTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLWLESS*SHLYLQ
Trigger: CTGGAGGTACAAATGGCTCCAGGAGGATTCCAGCCA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACCATGTCCAGCTACTaGGGGCTTTTCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTMSSY*GLFLQN
Trigger: ATTCTGCAGGAAAAGCCCCCAGTAGCTGGACATGGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATACCTTCTGGTGGGGCTaGCCCGGTTCTGCACCATGT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDTFWWG*PGSAPC
Trigger: ACATGGTGCAGAACCGGGCCAGCCCCACCAGAAGGT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTCTGAGACCTTCTGGTaGGGCTGGCCCGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSETFW*GWPGSA
Trigger: TGCAGAACCGGGCCAGCCCCACCAGAAGGTCTCAGA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGTAGAAGAGATCACATaGAACGTGGGGGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQVEEIT*NVGALR
Trigger: TCTCAGAGCCCCCACGTTCCATGTGATCTCTTCTAC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGAGAGTCTGCTGGGTaGCCATGCCTTCGGATAGCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGESAG*PCLRIA
Trigger: TGCTATCCGAAGGCATGGCCACCCAGCAGACTCTCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTACAGTCCACTGTTGTaGCCCATGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLYSPLL*PMMASH
Trigger: GTGGGAAGCCATCATGGGCCACAACAGTGGACTGTA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCCATCCTTTACAGGTaGGTGTCTGTGAATGTGGTG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSILYR*VSVNVV
Trigger: CACCACATTCACAGACACCCACCTGTAAAGGATGGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCAGGGTTACGTCTTCTaGGTTTCCATCCTTTACAGG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSQGYVF*VSILYR
Trigger: CCTGTAAAGGATGGAAACCCAGAAGACGTAACCCTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAGCAATGGCGAAGACATaGGTAGCTGCTGGTATCATT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAAMAKT*VAAGII
Trigger: AATGATACCAGCAGCTACTCATGTCTTCGCCATTGC...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCGATGGAAACTTTCTTaGAAGCTCCCACGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQRWKLS*KLPRSP
Trigger: TGGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAATGAAGTCCTTCAGTaGAGCTCTCCTGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLNEVLQ*SSPGSR
Trigger: TCTGCTCCCAGGAGAGCTTCACTGAAGGACTTCATT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGGCCTGAATTTTGGTaGCAGGTAATATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSWPEFW*QVISPS
Trigger: GGATGGAGATATTACCTGTCACCAAAATTCAGGCCA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAGCACTTGCACTGGCCTaGATTTTGGTGACAGGTAAT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAALALA*ILVTGN
Trigger: ATTACCTGTCACCAAAATTCAGGCCAGTGCAAGTGC...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCTGCAGGTGTCACACTaGAGTCCTTTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLQVSH*SPLASF
Trigger: AAAAGAAGCCAAAGGACTTCAGTGTGACACCTGCAG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACTGCAGGTGTCACACTaGAGTCCTTTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLQVSH*SPLASF
Trigger: AAAAGAAGCCAAAGGACTTCAGTGTGACACCTGCAG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCACCAGTTGTATGGCATaGGCATGGCAGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTTSCMA*AWQAAS
Trigger: ACTGGCTGCCTGCCATGCTCATGCCATACAACTGGT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTACCAGTTGTATGGCATaGGCATGGCAGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPTSCMA*AWQAAS
Trigger: ACTGGCTGCCTGCCATGCTCATGCCATACAACTGGT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTGGCCTGTGACCAAGTaGCAGGTTTCATTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLWPVTK*QVSFKA
Trigger: AGCCTTGAATGAAACCTGTCACTTGGTCACAGGCCA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAAGAAACACTGGCCTGTaGCCAAGTGACAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRARNTGL*PSDRFH
Trigger: ATGAAACCTGTCACTTGGTCACAGGCCAGTGTTTCT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAACCCAATAGATTGTTaGCATCCAAGTGGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSNPIDC*HPSGLH
Trigger: GTGCAAGCCACTTGGATGTCAACAATCTATTGGGTT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGTTTTGTCTTGTAAGTaGCAGCTACACTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRVLSCK*QLHSLL
Trigger: CAACAAGGAGTGTAGCTGTCACTTACAAGACAAAAC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGGGACCAGATTGATTTaGGAGTGTTGTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPGTRLI*ECCPGK
Trigger: CTTACCTGGACAACACTCTCAAATCAATCTGGTCCC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAAGCCAACCACTGCTCTaGAAAACTCGACTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRASQPLL*KTRLSS
Trigger: TGAGGAAAGTCGAGTTTTTCAGAGCAGTGGTTGGCT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATGGCTCCAAGCCAGTaGTGGTTGTCATTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLMAPSQ*WLSLFE
Trigger: CTCAAACAATGACAACCATCACTGGCTTGGAGCCAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTCTCCCAGGAGATATTaGGAGAGTACGAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLISPRRY*ESTKRG
Trigger: CCCTCTCTTCGTACTCTCTCAATATCTCCTGGGAGA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCTGTATTGACTGGGTaGGTGGAGCTGGGAAATTTA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSVLTG*VELGNL
Trigger: TAAATTTCCCAGCTCCACTCACCCAGTCAATACAGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGCAAAATACTCTTCCTaGTTGCCAGGTGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQAKYSS*LPGDAA
Trigger: TGCAGCATCACCTGGCAATCAGGAAGAGTATTTTGC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCTCAATTACACCTCTaGCAACAGGTTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSQLHL*QQVHPR
Trigger: CCTGGGATGAACCTGTTGTCAGAGGTGTAATTGAGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCGTAAGCACGATAGCTaGGTTCTGAGGAATTGTGGA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPRKHDS*VLRNCG
Trigger: TCCACAATTCCTCAGAACTCAGCTATCGTGCTTACG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGTAGACCAGACAACCTaGAGACTGGTTGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLVDQTT*RLVGVA
Trigger: TGCCACTCCAACCAGTCTTCAGGTTGTCTGGTCTAC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAAGGGAACATCCTTTTaGAGTGCAGGCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLKGTSF*SAGFYL
Trigger: CAGGTAGAAGCCTGCACTTCAAAAGGATGTTCCCTT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAAGGGAACATCCTTTTaGAGTGCAGGCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQKGTSF*SAGFYL
Trigger: CAGGTAGAAGCCTGCACTTCAAAAGGATGTTCCCTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTCTTCTCTCAATTGTaGAATTCTCCACCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLFSQL*NSPPSH
Trigger: ATGGCTTGGTGGAGAATTTCACAATTGAGAGAAGAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCTGTTTGTGCCTCCATaGAGAGTGCTCATCAGTACC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLFVPP*RVLIST
Trigger: GGTACTGATGAGCACTCTTCATGGAGGCACAAACAG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGTACCCATTACCCCCTaGGCAAGCAACAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLVPITP*ASNNGD
Trigger: GTCACCATTGTTGCTTGCTCAGGGGGTAATGGGTAC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCCAGGTTTTTATCAGTaGAATTCTGCTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSPGFYQ*NSAPHC
Trigger: GCAGTGAGGAGCAGAATTTCACTGATAAAAACCTGG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAATCTCTATGCAAGCTaGCCCCAGTGCCTTAAGAAC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQNLYAS*PQCLKN
Trigger: GTTCTTAAGGCACTGGGGTCAGCTTGCATAGAGATT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCAGTGTGTAGAGAGTaGAAGGATCCAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSVCRE*KDPGGG
Trigger: TCCGCCGCCTGGATCCTTTCACTCTCTACACACTGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTTGCACTGTGGGCGGTaGCCAACATACATTCATTTG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLHCGR*PTYIHL
Trigger: CAAATGAATGTATGTTGGTCACCGCCCACAGTGCAA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTTGATTCTGAGCCTGTaGCTTGCAATGTTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLILSL*LAMLES
Trigger: ACTCTCCAACATTGCAAGTCACAGGCTCAGAATCAA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGGGTGGTGCACGCTTaGATTCGTATTTCATACCTG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQRVVHA*IRISYL
Trigger: CAGGTATGAAATACGAATTCAAGCGTGCACCACCCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCTTTGCTGCAACAGTTaGAGCAGGTGCAGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLLCCNS*SRCRPL
Trigger: TAGAGGCCTGCACCTGCTTCAACTGTTGCAGCAAAG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGAAGGAGGCCGTCCTTaGGGCCAGCGTCCCGATTTG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSEGGRP*GQRPDL
Trigger: CAAATCGGGACGCTGGCCTCAAGGACGGCCTCCTTC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTTCATAGCTGTGAATaGCACCATTGGGGAACATGG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLVHSCE*HHWGTW
Trigger: CCATGTTCCCCAATGGTGTCATTCACAGCTATGAAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACGTCAGTCGTGCAGATaGCCTGGAAAAAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLRQSCR*PGKRRF
Trigger: AAACCTTCTTTTTCCAGGTCATCTGCACGACTGACG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGATGGCTTCCCACAGTaGGTTGTCCATCAAGACTTT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQDGFPQ*VVHQDF
Trigger: AAAGTCTTGATGGACAACTCACTGTGGGAAGCCATC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGATGGCTTCCCACAGTaGGTTGTCCATCAAGACTTT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLDGFPQ*VVHQDF
Trigger: AAAGTCTTGATGGACAACTCACTGTGGGAAGCCATC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACTGGCCTGTGCTTTTaGCACTTATGGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTGLCF*HLWLAN
Trigger: GTTTGCCAACCATAAGTGTCAAAAGCACAGGCCAGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCATAAGGGAGAAGGGGTaGGCCAAGGAGCATAGTCCC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTIREKG*AKEHSP
Trigger: GGGACTATGCTCCTTGGCTCACCCCTTCTCCCTTAT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTGGGAGTCCACATACTaGTTGGGTTGGCACGATGGA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLWESTY*LGWHDG
Trigger: TCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACACATTACACCTTGTTaGTCAGGTTTCAGCCATACA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLHITPC*SGFSHT
Trigger: TGTATGGCTGAAACCTGAGCAACAAGGTGTAATGTG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGCAATGTGATTGGGCATaGAATCTGAGAAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRQCDWA*NLRRSP
Trigger: TGGAGATCTTCTCAGATTGCATGCCCAATCACATTG...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGGTGATTTCGTCCACTaGATAATATCTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRGDFVH*IISVSE
Trigger: CTCAGACACAGATATTATGCAGTGGACGAAATCACC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGGTGATTTCGTCCACTaGATAATATCTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLGDFVH*IISVSE
Trigger: CTCAGACACAGATATTATGCAGTGGACGAAATCACC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTACTGATTGCACTGCCTaGCAGACACGTGTCTCTTAC +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLITDCTA*QTRVSY
Trigger: GTAAGAGACACGTGTCTGGCAGGCAGTGCAATCAGT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAAGCCCAATAACGTTTaGTTTGCACTTGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQKPNNV*FALALA
Trigger: GGCCAGTGCAAGTGCAAAGCAAACGTTATTGGGCTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAAAGCCCAATAACGTTTaGTTTGCACTTGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAKPNNV*FALALA
Trigger: GGCCAGTGCAAGTGCAAAGCAAACGTTATTGGGCTT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGCCCAGAGTGAGGATTaGAGAATTTGTTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLAQSED*RICSLS
Trigger: GCTCAGTGAACAAATTCTGCAATCCTCACTCTGGGC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTGGCTTGCAGATGCACTaGCCTGTCTTAGCATTACAG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIGLQMH*PVLALQ
Trigger: CTGTAATGCTAAGACAGGGCAGTGCATCTGCAAGCC...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTGTTACCCCTAATTTaGAAGGACATTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLLPLI*KDIVLL
Trigger: CAACAGGACAATGTCCTTGCAAATTAGGGGTAACAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCATTGGTCACAACGTTaGCCAGCAATGGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPHWSQR*PAMEAS
Trigger: AGATGCTTCCATTGCTGGGCAACGTTGTGACCAATG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGGGATTTAGCAGTGTaGAACAGCTGTGAAAACGCC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQWDLAV*NSCENA
Trigger: GGCGTTTTCACAGCTGTTGCACACTGCTAAATCCCA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATGGGATTTAGCAGTGTaGAACAGCTGTGAAAACGCC +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAWDLAV*NSCENA
Trigger: GGCGTTTTCACAGCTGTTGCACACTGCTAAATCCCA...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACCGCTGGACACAGATaGCAAGTTAACGACAGCACC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTAGHR*QVNDST
Trigger: GGTGCTGTCGTTAACTTGGCATCTGTGTCCAGCGGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCCAGGTCACCTCAATaGTGTATCCATTTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPRSPQ*CIHLSC
Trigger: GCAGCTTAAATGGATACAGCATTGAGGTGACCTGGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCCAGGTCACCTCAATaGTGTATCCATTTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPPRSPQ*CIHLSC
Trigger: GCAGCTTAAATGGATACAGCATTGAGGTGACCTGGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTACAGCCAGCCAAAGTaGAAGCAGTTAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQYSQPK*KQLGLL
Trigger: CAGTAACCCTAACTGCTTGCACTTTGGCTGGCTGTA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTATTAGGGCGAAAAGGTaGTTCCCACCTCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPIRAKR*FPPHVG
Trigger: GCCCACGTGAGGTGGGAAGCACCTTTTCGCCCTAAT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTCCAGGTTTGTCCTCTaGGGTCATGAATGGAATCCA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPSRFVL*GHEWNP
Trigger: TGGATTCCATTCATGACCGCAGAGGACAAACCTGGA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGATTTTCTAGGATGCTaGCAGGTGACCAACATCATT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLDFLGC*QVTNII
Trigger: AATGATGTTGGTCACCTGGCAGCATCCTAGAAAATC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGGGATCCCTTCCGGTaGCCCTGGGAGTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVWDPFR*PWECPY
Trigger: GTATGGACACTCCCAGGGGCACCGGAAGGGATCCCA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACTTCTACCCAAGCACTaGTGTTTGTGCCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLLPKH*CLCLHE
Trigger: TTCATGGAGGCACAAACAGCAGTGCTTGGGTAGAAG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCTTCTACCCAAGCACTaGTGTTTGTGCCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLLPKH*CLCLHE
Trigger: TTCATGGAGGCACAAACAGCAGTGCTTGGGTAGAAG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCTGATGATTTGGTTGTaGCTCCTGTATTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLMIWL*LLYSAT
Trigger: GGTGGCCGAATACAGGAGGCACAACCAAATCATCAG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCTGGGCAGAGGATCCTaGACTCTTTGGTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLGRGS*TLWFPS
Trigger: TGAAGGAAACCAAAGAGTGCAGGATCCTCTGCCCAG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCCTTGGGTAGTAGCTaGAACTACCTTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSLGSS*NYLATG
Trigger: ACCAGTAGCAAGGTAGTTGCAGCTACTACCCAAGGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATTCACTGTGAAAGCATaGACGGTAGGGCTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLFTVKA*TVGLLN
Trigger: ATTTAACAGCCCTACCGTGCATGCTTTCACAGTGAA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAGCATCCTCCACTCGTaGAGGCTTGGAGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSILHS*RLGVHS
Trigger: GCTATGCACTCCAAGCCTGCACGAGTGGAGGATGCT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTGCAACCTCCATTCGTaGAGGCTACAAGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLCNLHS*RLQGRS
Trigger: ACTTCTCCCTTGTAGCCTGCACGAATGGAGGTTGCA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCTGAGCCTGTGACTTaGAATGTTGGAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSEPVT*NVGESM
Trigger: CATGGACTCTCCAACATTGCAAGTCACAGGCTCAGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGGGTTGCATCAAAGGTaGAATCTCAGGGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPGLHQR*NLRGLY
Trigger: ATACAGACCCCTGAGATTGCACCTTTGATGCAACCC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGGCTGGCCCGGTTCTaGACCATGTCCAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGLARF*TMSSYW
Trigger: CCAGTAGCTGGACATGGTGCAGAACCGGGCCAGCCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCAGCCCCATGGGCGCTaGTGGAGAACAGCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQQPHGR*WRTACR
Trigger: TCTACAGGCTGTTCTCCAGCAGCGCCCATGGGGCTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCTGCTGGGTGGCCATaGCTTCGGATAGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSAGWP*LRIALS
Trigger: AGACAGTGCTATCCGAAGGCATGGCCACCCAGCAGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGGCCATGGAGAGTCTaGTGGGTGGCCATGCCTTCG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQRPWRV*WVAMPS
Trigger: CGAAGGCATGGCCACCCAGCAGACTCTCCATGGCCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCAAGGCTGGCTTTCTaGCCCAGCCCCGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPRLAF*PSPVYF
Trigger: AAAGTACACGGGGCTGGGGCAGAAAGCCAGCCTTGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAATGGGTGCAGACCTTaGATTCCAGGGTTACGTCTT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQNGCRP*IPGLRL
Trigger: AAGACGTAACCCTGGAATGCAAGGTCTGCACCCATT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGTCAGTCTGAGGAGCTaGTCTCTCACAGAGCTAGAT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLVSLRS*SLTELD
Trigger: ATCTAGCTCTGTGAGAGAGCAGCTCCTCAGACTGAC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACGGTGTGTTCATGGATaGCAGCATGATTTTTACATC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLRCVHG*QHDFYI
Trigger: GATGTAAAAATCATGCTGGCATCCATGAACACACCG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTTTCAGTAACGGGGTaGATACTGAGAATCTCCAAT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRVSVTG*ILRISN
Trigger: ATTGGAGATTCTCAGTATGCACCCCGTTACTGAAAC...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGCGATACTCCATTTTCTaGAAACTGCAGACACGTTCT +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRRYSIF*KLQTRS
Trigger: AGAACGTGTCTGCAGTTTCCAGAAAATGGAGTATCG...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGTCCACATACTGCTTaGGTTGGCACGATGGAAACT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSPHTA*VGTMET
Trigger: AGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGAAGCACCACAATTCCTaGCAAAATATTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRKHHNS*QNIASP
Trigger: AGGACTGGCAATATTTTGCCAGGAATTGTGGTGCTT...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTGGGTGAGTGGAGCTaGGAAATTTACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLGEWS*EIYNTH
Trigger: ATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGATTTGCCTTTTTGGGTaGGTTCCAGGAGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQICLFG*VPGEQQ
Trigger: TTGCTGCTCTCCTGGAACCCACCCAAAAAGGCAAAT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATTTGCCTTTTTGGGTaGGTTCCAGGAGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLICLFG*VPGEQQ
Trigger: TTGCTGCTCTCCTGGAACCCACCCAAAAAGGCAAAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCACTTAGTAGAAACTaGTGGGGTGTAAATACTGCT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLALSRN*WGVNTA
Trigger: AGCAGTATTTACACCCCACCAGTTTCTACTAAGTGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCCAGAGCACAACCTTTaGCCGTGCATGCTTGGACTC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTPEHNL*PCMLGL
Trigger: GAGTCCAAGCATGCACGGCCAAAGGTTGTGCTCTGG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGCCATCTGGAGCTCCTaGAGGCATTGCAATTGTTAT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLAIWSS*RHCNCY
Trigger: ATAACAATTGCAATGCCTCCAGGAGCTCCAGATGGC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTGGCAGATGAAAGCCTaGGAGGCAGCACGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDWQMKA*EAARHL
Trigger: CAGATGGCGTGCTGCCTCCCAGGCTTTCATCTGCCA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGCGTTATTACGAGCTaGTGTAGACCAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSVITS*CRPDNL
Trigger: CAGGTTGTCTGGTCTACACCAGCTCGTAATAACGCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTCTGGAGTTGGTATCTaGGAGAGCCAGGAGCGTTAT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLSGVGI*ESQERY
Trigger: ATAACGCTCCTGGCTCTCCCAGATACCAACTCCAGA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCACTGCCAAATCCATTaGAGGCAACCAACCGAAACA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPHCQIH*RQPTET
Trigger: TGTTTCGGTTGGTTGCCTCCAATGGATTTGGCAGTG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTCTGCGGTCATGAATaGAATCCAAGAACTATGTGC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLCGHE*NPRTMC
Trigger: GCACATAGTTCTTGGATTCCATTCATGACCGCAGAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGAACAGCTCTGGACTTaGGATCCCTTCCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVEQLWT*DPFRCP
Trigger: GGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTACCAAGCCATTGGGGTaGGTAGGGGGTTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPTKPLG*VGGCQD
Trigger: ATCTTGGCAACCCCCTACCCACCCCAATGGCTTGGT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGTATGTCTCCGTTCTaGATGAGTGGGGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSMSPF*MSGGFQ
Trigger: TTGGAAACCCCCACTCATCCAGAACGGAGACATACT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGATGCAAGTGGCTGCTaGATTTTACGTCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLDASGC*ILRLRS
Trigger: GCTTCTGAGACGTAAAATCCAGCAGCCACTTGCATC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATGTTGGTATATCACTTaGAGTGTCTTCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLCWYIT*SVFHSG
Trigger: ACCACTGTGGAAGACACTCCAAGTGATATACCAACA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGCCATTTGGCTTCCGTaGAGACACCCAATCAATTTG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLAIWLP*RHPINL
Trigger: CAAATTGATTGGGTGTCTCCACGGAAGCCAAATGGC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAAGAATGATGCCATTTaGCTTCCGTGGAGACACCCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQKNDAI*LPWRHP
Trigger: TGGGTGTCTCCACGGAAGCCAAATGGCATCATTCTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAAGAATGATGCCATTTaGCTTCCGTGGAGACACCCA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPKNDAI*LPWRHP
Trigger: TGGGTGTCTCCACGGAAGCCAAATGGCATCATTCTT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCAACTACCTTGCTACTaGTGGCACAGCCAGCAACCG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTQLPCY*WHSQQP
Trigger: CGGTTGCTGGCTGTGCCACCAGTAGCAAGGTAGTTG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCTGAATGAGCACTCGTaGCTTGAGCCCAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLNEHS*LEPKEL
Trigger: CAGCTCCTTGGGCTCAAGCCACGAGTGCTCATTCAG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTTCACACTGCGTCCATaGTTGCAAACCTGTGTCATT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSFTLRP*LQTCVI
Trigger: AATGACACAGGTTTGCAACCATGGACGCAGTGTGAA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATAGGATATCACAGGTaGAGAGAGACCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLIGYHR*RETFWR
Trigger: CCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTGGTGGGTTTGCTGGTaGAGCATCCTCCACTCGTGC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDWWVCW*SILHSC
Trigger: GCACGAGTGGAGGATGCTCCACCAGCAAACCCACCA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCTGATCTGGCCATTTaGGTTTCTTGGAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSDLAI*VSWRFP
Trigger: TGGAAACCTCCAAGAAACCCAAATGGCCAGATCAGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCCCTTGGCTGTTGCTaGCAGTTACTGTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLPLGCC*QLLCSY
Trigger: ATAGCTACACAGTAACTGCCAGCAACAGCCAAGGGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCTCCTGAGGACCCCTaGCCTGCAATTTTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSPEDP*PAILEV
Trigger: AACCTCCAAAATTGCAGGCCAGGGGTCCTCAGGAGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGAGAAACAGTTGGCTaGAATCCTCCTGGAGCCATT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLRETVG*NPPGAI
Trigger: AATGGCTCCAGGAGGATTCCAGCCAACTGTTTCTCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCAAAACTTTTCCATTTaGCTGCAGCGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQQNFSI*LQRSCP
Trigger: TGGACAGGACCGCTGCAGCCAAATGGAAAAGTTTTG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGACCTTCTGGTGGGGCTaGCCCGGTTCTGCACCATGT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQTFWWG*PGSAPC
Trigger: ACATGGTGCAGAACCGGGCCAGCCCCACCAGAAGGT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGCTCTGAGACCTTCTaGTGGGGCTGGCCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGSETF*WGWPGS
Trigger: AGAACCGGGCCAGCCCCACCAGAAGGTCTCAGAGCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGACTGTCTCAGCCCCATaGGCGCTGCTGGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQTVSAP*ALLENS
Trigger: GCTGTTCTCCAGCAGCGCCCATGGGGCTGAGACAGT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCACCATTGGGGAACATaGGGGGACTCCACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQHHWGT*GDSTGR
Trigger: CCTTCCGGTGGAGTCCCCCCATGTTCCCCAATGGTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGGTGGACACAGCCTTaGTTAATGCTTATTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSRWTQP*LMLICA
Trigger: GGCACAAATAAGCATTAACCAAGGCTGTGTCCACCT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCCAGTCCCCTCAGTGTaGCAAATGGCTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTPVPSV*QMALQQ
Trigger: CTGTTGAAGAGCCATTTGTCACACTGAGGGGACTGG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGCAATGGCGAAGACATaGGTAGCTGCTGGTATCATT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLAMAKT*VAAGII
Trigger: AATGATACCAGCAGCTACTCATGTCTTCGCCATTGC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTGAAGCCAGAGCCCAATaGAAGAACTGGGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIEARAQ*KNWAIH
Trigger: ATGAATTGCCCAGTTCTTTCATTGGGCTCTGGCTTC...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGAGATCAACATTTCAATaGCCTGAAACAAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRRSTFQ*PETRSQ
Trigger: CTGGCTTCTTGTTTCAGGTCATTGAAATGTTGATCT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTAGTGTAGGTAGGGTGTaGAGATCTGTATGGGCAATC +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLISVGRV*RSVWAI
Trigger: GATTGCCCATACAGATCTTCACACCCTACCTACACT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGCTACTGAGGCCTGCTaGGAAAAGGGCAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLATEAC*EKGSVG
Trigger: ACCTACACTGCCCTTTTCTCAGCAGGCCTCAGTAGC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAATGAAGTCCTTCAGTaGAGCTCTCCTGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLNEVLQ*SSPGSR
Trigger: TCTGCTCCCAGGAGAGCTTCACTGAAGGACTTCATT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAACTCCTCCTCCCCCTCTaGAGTGCTCAAAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQLLLPL*SAQKEM
Trigger: CATTTCCTTTTGAGCACTTCAGAGGGGGAGGAGGAG...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCTCCTCCTCCCCCTCTaGAGTGCTCAAAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLLLPL*SAQKEM
Trigger: CATTTCCTTTTGAGCACTTCAGAGGGGGAGGAGGAG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCACTGTCCTCCAATCTaGTCACAAAGAATGCTACCA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPHCPPI*SQRMLP
Trigger: TGGTAGCATTCTTTGTGATCAGATTGGAGGACAGTG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTCACACTGCCCAGAGTaGGGATTGCAGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLISHCPE*GLQNLF
Trigger: GAACAAATTCTGCAATCCTCACTCTGGGCAGTGTGA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCTGCAGGTGTCACACTaGAGTCCTTTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLILQVSH*SPLASF
Trigger: AAAAGAAGCCAAAGGACTTCAGTGTGACACCTGCAG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCACATCTGGCAGTGTTaGAAATTGTCAATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRHIWQC*KLSMVK
Trigger: TTTGACCATTGACAATTTTCAACACTGCCAGATGTG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATACAGGCACTGGCCACTaGTTGGGTCACAAATGGTCC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDTGTGH*LGHKWS
Trigger: GGACCATTTGTGACCCAATCAGTGGCCAGTGCCTGT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTCTTGGCAAACACACTaGCCAGTCAGGCTATTACAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLSWQTH*PVRLLQ
Trigger: CTGTAATAGCCTGACTGGTCAGTGTGTTTGCCAAGA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTCTTGGCAAACACACTaGCCAGTCAGGCTATTACAG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLISWQTH*PVRLLQ
Trigger: CTGTAATAGCCTGACTGGTCAGTGTGTTTGCCAAGA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCACACTTTGAGCCAGTaGCAAATTGTTTACAGAAAC +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRHTLSQ*QIVYRN
Trigger: GTTTCTGTAAACAATTTGTCACTGGCTCAAAGTGTG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAAGTGTCACAGAGTCTaGGCCAATAGGAATGATATA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLKCHRV*ANRNDI
Trigger: TATATCATTCCTATTGGCTCAGACTCTGTGACACTT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATCTATGGGACCAGATTaGTTTGAGAGTGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRASMGPD*FESVVQ
Trigger: CTGGACAACACTCTCAAATCAATCTGGTCCCATAGA...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATTCCAGATGGTAGCTaGGGTTTCATGACCTTCGTA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPIPDGS*GFMTFV
Trigger: TACGAAGGTCATGAAACCTCAGCTACCATCTGGAAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGATTCTACAAATGAATaGGGACTGAGCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPDSTNE*GLSQPL
Trigger: CAGTGGTTGGCTCAGTCCTCATTCATTTGTAGAATC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATGGCTCCAAGCCAGTaGTGGTTGTCATTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLMAPSQ*WLSLFE
Trigger: CTCAAACAATGACAACCATCACTGGCTTGGAGCCAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATTCTCCCGTTCTTTCTaGGACCCAGGCAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQFSRSF*DPGRRH
Trigger: GTGTCTTCTGCCTGGGTCTCAGAAAGAACGGGAGAA...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCTGAAGGAGGGATCATaGATACAGGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLILKEGS*IQVLIL
Trigger: GAGAATCAGCACCTGTATTCATGATCCCTCCTTCAG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATTCCTGATTGCCAGGTaGTGCTGCAAAGACAATCAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLFLIAR*CCKDNQ
Trigger: TTGATTGTCTTTGCAGCATCACCTGGCAATCAGGAA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGGTTCCCAAATAGCTaGCGGATTGTAATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLRFPNS*RIVILH
Trigger: ATGAAGAATTACAATCCGTCAGCTATTTGGGAACCT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCCATTCACACTTGCTaGTATGAAAGAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSIHTC*YERAFL
Trigger: AAGGAAGGCTCTTTCATATCAGCAAGTGTGAATGGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCCCACATAAACTGGTaGATTCACCACCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSHINW*IHHQWL
Trigger: CAGCCACTGGTGGTGAATTCACCAGTTTATGTGGGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGATGTTCAATGCATGTaGGCTCTCAGTACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLDVQCM*ALSTAS
Trigger: GCTGGCTGTACTGAGAGCTCACATGCATTGAACATC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGGGATCCCTGTGTTTTaGCAAACACATTTACTGTTC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSGIPVF*QTHLLF
Trigger: GAACAGTAAATGTGTTTGTCAAAACACAGGGATCCC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACATAGAATATCCCAGTaGAAAGGACTGAGTGTGTTA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLHRISQ*KGLSVL
Trigger: TAACACACTCAGTCCTTTTCACTGGGATATTCTATG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCTGCCTTGGCTATTTaGAATATTCACTTGTACAGT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLAALAI*NIHLYS
Trigger: ACTGTACAAGTGAATATTTCAAATAGCCAAGGCAGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCTGTTTGTGCCTCCATaGAGAGTGCTCATCAGTACC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLLFVPP*RVLIST
Trigger: GGTACTGATGAGCACTCTTCATGGAGGCACAAACAG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAAGCCACTGAGTTCCTaGATAAATATTGTGCCACCG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPKPLSS*INIVPP
Trigger: CGGTGGCACAATATTTATTCAGGAACTCAGTGGCTT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCAAATCTGGTTTCCTaGGGTGGAGTACGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLANLVS*GGVRHS
Trigger: AGAATGCCGTACTCCACCTCAGGAAACCAGATTTGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCAGCATATGGTATCTaGCATATTCACATAATCCTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLAAYGI*HIHIIL
Trigger: CAGGATTATGTGAATATGTCAGATACCATATGCTGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGATGTCATGTAGGGCTTaGGGTTCACATCTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQMSCRA*GSHLCK
Trigger: CTTACACAGATGTGAACCTCAAGCCCTACATGACAT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATTTAATGACGCCGTTTaGTTTCTCAGGGACACTCCA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLFNDAV*FLRDTP
Trigger: TGGAGTGTCCCTGAGAAATCAAACGGCGTCATTAAA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTGGAGTTACAGGCTCTaGCCCGATATTCGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLWSYRL*PDIRRV
Trigger: CACTCTACGAATATCGGGTCAGAGCCTGTAACTCCA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCACAGACTCTCCACTaGACCCTTGGAGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPQTLH*TLGVTG
Trigger: GCCTGTAACTCCAAGGGTTCAGTGGAGAGTCTGTGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCGTACAGGTGGGCTTaGTGGCTTGTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPYRWA*WLVPFT
Trigger: AGTGAAGGGAACAAGCCATCAAGCCCACCTGTACGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACAGTAGGAGCCAGCTaGGAGTCTGGAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTVGAS*ESGGAS
Trigger: TGAAGCCCCTCCAGACTCTCAGCTGGCTCCTACTGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTTCATCAGTGTAATTaGAAGTCACAGGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLHQCN*KSQDQS
Trigger: GCTTTGATCCTGTGACTTTCAATTACACTGATGAAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCATTTGAGTGGCACTaGCGGCCCAAAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSFEWH*RPKDLE
Trigger: CTCCAGATCTTTGGGCCGTCAGTGCCACTCAAATGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTTGATTCTGAGCCTGTaGCTTGCAATGTTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLILSL*LAMLES
Trigger: ACTCTCCAACATTGCAAGTCACAGGCTCAGAATCAA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGAATGTCCAGTCACTTaGTGCACATCCCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTECPVT*CTSQGG
Trigger: ACCACCCTGGGATGTGCATCAAGTGACTGGACATTC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTTCACTGCCCAGACCTaGTACTCATACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQFTAQT*YSYSVK
Trigger: TTTCACAGAGTATGAGTATCAGGTCTGGGCAGTGAA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACAGCCTGTAGAGACTaGCGATCCCGTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTACRD*RSRWAS
Trigger: GGAAGCCCAACGGGATCGTCAGTCTCTACAGGCTGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGTTCATAGCTGTGAATaGCACCATTGGGGAACATGG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLVHSCE*HHWGTW
Trigger: CCATGTTCCCCAATGGTGTCATTCACAGCTATGAAC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGGGAGGTCTTTCTCTaGTATATGGCTCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLREVFL*YMALCG
Trigger: TCCACAAAGAGCCATATATCAGAGAAAGACCTCCCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGGAGACATCCTCTTCTaGAGAGGTACCAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPGDILF*RGTKGG
Trigger: ACCTCCCTTGGTACCTCTTCAGAAGAGGATGTCTCC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGATTGTGTCAACCCTaGCAGAAATGGCAGATAGAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLGLCQP*QKWQIE
Trigger: TTCTATCTGCCATTTCTGTCAGGGTTGACACAATCC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGAAAAGATGGACATGCTaGAACAATCAGGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRKRWTC*NNQAKA
Trigger: AGCTTTTGCCTGATTGTTTCAGCATGTCCATCTTTT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCAGGCCCACGCCACTTaGCAGCAATACTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPQAHAT*QQYFEA
Trigger: TGCTTCAAAGTATTGCTGGCAAGTGGCGTGGGCCTG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACCTCCAAACATTTATTaGACTGTCTCCCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLPPNIY*TVSLQH
Trigger: ATGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCTCTGGGCGGAGGTTaGTGGAATGGAGTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPLGGG*WNGVLL
Trigger: CAGCAAAACTCCATTCCAGCAACCTCCGCCCAGAGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTGTTCTTCAGAACTCTaGCAATCCAGAGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPCSSEL*QSRGSQ
Trigger: TTGGGAACCTCTGGATTGGCAGAGTTCTGAAGAACA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTGTATCCATTTAAGCTaGGGACTCTTGAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPCIHLS*GLLREL
Trigger: CAACTCCCTCAAGAGTCCGCAGCTTAAATGGATACA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGCGGGGTGGACGGGTaGTGTCCTCACTATAGGCTT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVCGVDG*CPHYRL
Trigger: AAGCCTATAGTGAGGACAGCACCCGTCCACCCCGCA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTGGCCTCACTCACTGTaGACCCACCACCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQWPHSL*THHLCK
Trigger: CTTGCACAGGTGGTGGGTGCACAGTGAGTGAGGCCA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGCTCCTGGAGGCATTaGAATTGTTATAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSSWRH*NCYRIS
Trigger: ACTGATCCTATAACAATTGCAATGCCTCCAGGAGCT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGATTTTCTAGGATGCTaGCAGGTGACCAACATCATT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSDFLGC*QVTNII
Trigger: AATGATGTTGGTCACCTGGCAGCATCCTAGAAAATC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTTTTTGACACCTCACTaGCTTGCAGAGCTCATCACT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPFLTPH*LAELIT
Trigger: AGTGATGAGCTCTGCAAGGCAGTGAGGTGTCAAAAA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTGCTTGGTGGCAGGATaGTCTCCGGAACTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQCLVAG*SPELLG
Trigger: CCCAAGGAGTTCCGGAGAGCATCCTGCCACCAAGCA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTTCCCTCGAAGCATCTaGGAATCACTTCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPFPRSI*ESLHSE
Trigger: TTCGCTATGAAGTGATTCGCAGATGCTTCGAGGGAA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACACTGCGTCCATGGTTaGAAACCTGTGTCATTATAC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLHCVHG*KPVSLY
Trigger: GTATAATGACACAGGTTTGCAACCATGGACGCAGTG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTAATCTTTCCATTTTaGACTGTGGGCGGTGACCAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLVIFPF*TVGGDQ
Trigger: TTGGTCACCGCCCACAGTGCAAAATGGAAAGATTAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCCTGCAGAATTCACTaGCCAGACCTGATACTCATA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSCRIH*PDLILI
Trigger: TATGAGTATCAGGTCTGGGCAGTGAATTCTGCAGGA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCACTGGGGGCTTTTCCTaGAGAATTCACTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTTGGFS*RIHCPD
Trigger: GTCTGGGCAGTGAATTCTGCAGGAAAAGCCCCCAGT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCAGCCCCATGGGCGCTaGTGGAGAACAGCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSQPHGR*WRTACR
Trigger: TCTACAGGCTGTTCTCCAGCAGCGCCCATGGGGCTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGCCCACCTCGTTGTGTaGCACCACTCTCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDAHLVV*HHSQLV
Trigger: TACAAGCTGAGAGTGGTGGCACACAACGAGGTGGGC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCGCTGTAGAACTCTGTaGTTTTGCTCCGCGATCCCT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPRCRTL*FCSAIP
Trigger: AGGGATCGCGGAGCAAAAGCACAGAGTTCTACAGCG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAATGGGTGCAGACCTTaGATTCCAGGGTTACGTCTT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLNGCRP*IPGLRL
Trigger: AAGACGTAACCCTGGAATGCAAGGTCTGCACCCATT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAGTCCACATACTGCTTaGGTTGGCACGATGGAAACT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLSPHTA*VGTMET
Trigger: AGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCAGATCATTCTTGTCTaGTGTGATGCAGCTACTGAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQQIILV*CDAATE
Trigger: CTCAGTAGCTGCATCACACCAGACAAGAATGATCTG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACAGATCATTCTTGTCTaGTGTGATGCAGCTACTGAG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLQIILV*CDAATE
Trigger: CTCAGTAGCTGCATCACACCAGACAAGAATGATCTG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACTTGCAGAATTGCTATaGGCGTTAGGATGCAGATCA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLAELL*ALGCRS
Trigger: TGATCTGCATCCTAACGCCCATAGCAATTCTGCAAG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCAACGGCAATGTGATTaGGCATGCAATCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPQRQCD*ACNLRR
Trigger: TCTTCTCAGATTGCATGCCCAATCACATTGCCGTTG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCACAACGGCAATGTGATTaGGCATGCAATCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAQRQCD*ACNLRR
Trigger: TCTTCTCAGATTGCATGCCCAATCACATTGCCGTTG...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAATTGCCACGGGAATATaGAGTAAAATTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLIATGI*SKIGKL
Trigger: CAGCTTTCCAATTTTACTCCATATTCCCGTGGCAAT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGTAATGGCAGCTTTTaGAATGGCTGTTGCATTGAC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSCNGSF*NGCCID
Trigger: GTCAATGCAACAGCCATTCCAAAAGCTGCCATTACA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAGTTTGCAAACATCTATaGCCGAAGGATCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAVCKHL*PKDLHQ
Trigger: TTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAAC...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGGCACACACAGGCACTaGCCACTGATTGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDGTHRH*PLIGSQ
Trigger: TTGTGACCCAATCAGTGGCCAGTGCCTGTGTGTGCC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCACTGCACCAGTTGTATaGCATGAGCATGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTTAPVV*HEHGRQ
Trigger: CTGCCTGCCATGCTCATGCCATACAACTGGTGCAGT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAACTGCACCAGTTGTATaGCATGAGCATGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQTAPVV*HEHGRQ
Trigger: CTGCCTGCCATGCTCATGCCATACAACTGGTGCAGT...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAACTGGGCGGAGGTTGCTaGAATGGAGTTTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQLGGGC*NGVLLQ
Trigger: TTGCAGCAAAACTCCATTCCAGCAACCTCCGCCCAG...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCTTTGGGGAGGGGCCTaGGCTGTGGTCACTGTAATG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQLWGGA*AVVTVM
Trigger: CATTACAGTGACCACAGCCCAGGCCCCTCCCCAAAG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGTGTAACATTATCTGCTaGCTTCTCCCAGGAGATATT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRCNIIC*LLPGDI
Trigger: AATATCTCCTGGGAGAAGCCAGCAGATAATGTTACA...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCCTTTAACCAGAGGTaGCCTCAGTTGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSFNQR*PQLCWC
Trigger: GCACCAGCACAACTGAGGCCACCTCTGGTTAAAGGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGGAAACCACCTAAGATaGATTGTTGTGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRGNHLR*IVVLLI
Trigger: AATCAACAGCACAACAATCCATCTTAGGTGGTTTCC...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAATTCAGTTCTTCAGGTaGAAACCACCTAAGATGGAT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLIQFFR*KPPKMD
Trigger: ATCCATCTTAGGTGGTTTCCACCTGAAGAACTGAAT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTTCCTTTCATCATCGTaGTCATCAGAGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPFLSSS*SSELVE
Trigger: CTCTACCAGCTCTGATGACCACGATGATGAAAGGAA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCTGGGTGAGTGGAGCTaGGAAATTTACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPLGEWS*EIYNTH
Trigger: ATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGAAGTCTGTATTGACTaGGTGAGTGGAGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLEVCID*VSGAGK
Trigger: TTTCCCAGCTCCACTCACCCAGTCAATACAGACTTC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATACTACCATTCAGGATaGCAGAGGAACCTGTATATA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLYYHSG*QRNLYI
Trigger: TATATACAGGTTCCTCTGCCATCCTGAATGGTAGTA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACCATGAAACATATATaGATGAAGTTCCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTMKHI*MKFQEP
Trigger: GGGTTCCTGGAACTTCATCCATATATGTTTCATGGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGTTGGCACACTTTGTaGAGCTGCTCCTGTTGTACG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSWHTL*SCSCCT
Trigger: CGTACAACAGGAGCAGCTCCACAAAGTGTGCCAACT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATTGTGGGGCTTCTTGTaGAGTAGAGATGTTCAATGC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLWGFL*SRDVQC
Trigger: GCATTGAACATCTCTACTCCACAAGAAGCCCCACAA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTTGTGGGGCTTCTTGTaGAGTAGAGATGTTCAATGC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLWGFL*SRDVQC
Trigger: GCATTGAACATCTCTACTCCACAAGAAGCCCCACAA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGGATTTGGCTACTGGTaGCTGAACCTCTTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDGFGYW*LNLLWG
Trigger: GCCCCACAAGAGGTTCAGCCACCAGTAGCCAAATCC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTATCCACGTGTTCTGGTaGCAGCTGTGCTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPIHVFW*QLCCVQ
Trigger: CTGTACACAGCACAGCTGCCACCAGAACACGTGGAT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCATCCACGTGTTCTGGTaGCAGCTGTGCTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTIHVFW*QLCCVQ
Trigger: CTGTACACAGCACAGCTGCCACCAGAACACGTGGAT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGAAGACTGGTTGGAGTaGCAGATGAAAGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPEDWLE*QMKAWE
Trigger: CTCCCAGGCTTTCATCTGCCACTCCAACCAGTCTTC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGACCTCATCTGGAGTTaGTATCTGGGAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPDLIWS*YLGEPG
Trigger: TCCTGGCTCTCCCAGATACCAACTCCAGATGAGGTC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCATCAGAGAACAGCTCTaGACTTGGGATCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTIREQL*TWDPFR
Trigger: CCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGAT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTCCATTTGGCTTGGATaGTGGTTGCCAAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPSIWLG*WLPRNH
Trigger: GTGATTTCTTGGCAACCACCATCCAAGCCAAATGGA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGATGATGACAACCTCTaGAGGAAGCATGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTDDDNL*RKHALR
Trigger: CCTCAGGGCATGCTTCCTCCAGAGGTTGTCATCATC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGATGATGACAACCTCTaGAGGAAGCATGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPDDDNL*RKHALR
Trigger: CCTCAGGGCATGCTTCCTCCAGAGGTTGTCATCATC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATTGTGCTGTTCATCTaGACAGCATACTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPIVLFI*TAYFTW
Trigger: CCAGGTGAAGTATGCTGTCCAGATGAACAGCACAAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTTGATGCCTTCCCTGTaGAATTGTGAGACCCTCTTA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLMPSL*NCETLL
Trigger: TAAGAGGGTCTCACAATTCCACAGGGAAGGCATCAA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACACTCCCTGTATGAATaGTTTCTTCGGCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLHSLYE*FLRQMN
Trigger: GTTCATCTGCCGAAGAAACCATTCATACAGGGAGTG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGGCTGTGATGCTTGGTaGCAGGATGCTCTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVGCDAW*QDALRN
Trigger: GTTCCGGAGAGCATCCTGCCACCAAGCATCACAGCC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGCTGTAGTTGGTGTATaGCTGGAGACCTGTGACCGT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPAVVGV*LETCDR
Trigger: ACGGTCACAGGTCTCCAGCCATACACCAACTACAGC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGGGGATGAGGATCCCTaGTGGTATCCAAGCTACAAA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLGDEDP*WYPSYK
Trigger: TTTGTAGCTTGGATACCACCAGGGATCCTCATCCCC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGATGATGATTCCATTTaGTTTTTCAGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLDDDSI*FFRWHP
Trigger: TGGATGCCACCTGAAAAACCAAATGGAATCATCATC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTGAATGAGCACTCGTaGCTTGAGCCCAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLNEHS*LEPKEL
Trigger: CAGCTCCTTGGGCTCAAGCCACGAGTGCTCATTCAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGCCATTGGGAGATTCTaGCTTTGTCCAATTCAACAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQAIGRF*LCPIQQ
Trigger: CTGTTGAATTGGACAAAGCCAGAATCTCCCAATGGC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAAAATTTCTCCTGCATaGTTTGCAGCCACAACACCA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSKISPA*FAATTP
Trigger: TGGTGTTGTGGCTGCAAACCATGCAGGAGAAATTTT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGTGCACAACCTGCTCTaGTGCAGGCCTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSVHNLL*CRPPGS
Trigger: TGACCCTGGAGGCCTGCACCAGAGCAGGTTGTGCAC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACCATTAGACTGTTCTaGTGGGATCCAGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTIRLF*WDPGNQ
Trigger: CTGATTTCCTGGATCCCACCAGAACAGTCTAATGGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGTGACTTGCAATGTTaGAGAGTCCATGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQCDLQC*RVHVLW
Trigger: CCAGAGAACATGGACTCTCCAACATTGCAAGTCACA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTTGTACCTCCAGATGTaGAGGGGGTTGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLLYLQM*RGLHQR
Trigger: CCTTTGATGCAACCCCCTCCACATCTGGAGGTACAA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACCATGTCCAGCTACTaGGGGCTTTTCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTMSSY*GLFLQN
Trigger: ATTCTGCAGGAAAAGCCCCCAGTAGCTGGACATGGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCCATGGAGAGTCTGCTaGGTGGCCATGCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVPWRVC*VAMPSD
Trigger: ATCCGAAGGCATGGCCACCCAGCAGACTCTCCATGG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCACCATTGGGGAACATaGGGGGACTCCACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSHHWGT*GDSTGR
Trigger: CCTTCCGGTGGAGTCCCCCCATGTTCCCCAATGGTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTACGTACTCCTTCAGTTaGCCGTTCAGGAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPTYSFS*PFRRKV
Trigger: CACCTTCCTCCTGAACGGCCAACTGAAGGAGTACGT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCAGGGTTACGTCTTCTaGGTTTCCATCCTTTACAGG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLQGYVF*VSILYR
Trigger: CCTGTAAAGGATGGAAACCCAGAAGACGTAACCCTG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATTTACTGTTGGGCCCTaGGGTAATACATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLFTVGP*GNTLFS
Trigger: TGAAAACAATGTATTACCCCAGGGCCCAACAGTAAA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAACACTTGGTTACCTaGAGCTCAGAGCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKHLVT*SSERGL
Trigger: CAGACCACGCTCTGAGCTTCAGGTAACCAAGTGTTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGCAGGGTACTTTAAGTaGTGTTGCGATACTCCATTT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPAGYFK*CCDTPF
Trigger: AAATGGAGTATCGCAACATCACTTAAAGTACCCTGC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAGCAGGGTACTTTAAGTaGTGTTGCGATACTCCATTT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAAGYFK*CCDTPF
Trigger: AAATGGAGTATCGCAACATCACTTAAAGTACCCTGC...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCTCAGTCAAGGATATTaGAGCAAAATAGGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRLSQGY*SKIGKD
Trigger: ATCTTTGCCTATTTTGCTTCAATATCCTTGACTGAG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCTGTATGGGCAATCCTaGATACAAAACCGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLLYGQS*IQNRWV
Trigger: TACCCAGCGGTTTTGTATTCAGGATTGCCCATACAG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAAGCTGATTTTTGTCTaGTGCACCTGCACACTAAGA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLKLIFV*CTCTLR
Trigger: TCTTAGTGTGCAGGTGCATCAGACAAAAATCAGCTT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAAGCTGATTTTTGTCTaGTGCACCTGCACACTAAGA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQKLIFV*CTCTLR
Trigger: TCTTAGTGTGCAGGTGCATCAGACAAAAATCAGCTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGTTAGAGTTCTTGCATTaGAAGGTGTATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRLEFLH*KVYDPS
Trigger: AGAAGGATCATACACCTTTCAATGCAAGAACTCTAA...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCAGGGCAACGGCAATGTaGTTGGGCATGCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLRATAM*LGMQSE
Trigger: CTCAGATTGCATGCCCAATCACATTGCCGTTGCCCT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGGGCAACGGCAATGTaGTTGGGCATGCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRATAM*LGMQSE
Trigger: CTCAGATTGCATGCCCAATCACATTGCCGTTGCCCT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTCAGGATTCAACCGTaGCACTCTATTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAFRIQP*HSIISC
Trigger: ACAGCTGATAATAGAGTGTCACGGTTGAATCCTGAA...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGACAAGGTTTACAATTaGAAGCGTAAACTTGATCAC +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRDKVYN*KRKLDH
Trigger: GTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAATCCATTCTGGCACTaGTTGCACTGCCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDNPFWH*LHCLPD
Trigger: GTCTGGCAGGCAGTGCAATCAGTGCCAGAATGGATT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCACACTGCCCAGAGTaGGGATTGCAGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSHCPE*GLQNLF
Trigger: GAACAAATTCTGCAATCCTCACTCTGGGCAGTGTGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCACACTTTGAGCCAGTaGCAAATTGTTTACAGAAAC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSHTLSQ*QIVYRN
Trigger: GTTTCTGTAAACAATTTGTCACTGGCTCAAAGTGTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTTTTGTCTTGTAAGTaGCAGCTACACTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLVLSCK*QLHSLL
Trigger: CAACAAGGAGTGTAGCTGTCACTTACAAGACAAAAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTCTATGGGACCAGATTaGTTTGAGAGTGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLSMGPD*FESVVQ
Trigger: CTGGACAACACTCTCAAATCAATCTGGTCCCATAGA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGCCAACCACTGCTCTaGAAAACTCGACTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSQPLL*KTRLSS
Trigger: TGAGGAAAGTCGAGTTTTTCAGAGCAGTGGTTGGCT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTGATTCTACAAATGAATaGGGACTGAGCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIDSTNE*GLSQPL
Trigger: CAGTGGTTGGCTCAGTCCTCATTCATTTGTAGAATC...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGGCCGATTCTACAAATaGATGAGGACTGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPGRFYK*MRTEPT
Trigger: GGTTGGCTCAGTCCTCATTCATTTGTAGAATCGGCC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCACAGCTAAGACTCTaGACTCATACTTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSQLRL*THTWCM
Trigger: CATACACCAAGTATGAGTTCAGAGTCTTAGCTGTGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCTCCCAGGAGATATTaGGAGAGTACGAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSPRRY*ESTKRG
Trigger: CCCTCTCTTCGTACTCTCTCAATATCTCCTGGGAGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAATACCCATTTCCTATaGAACGGATTCCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLNTHFL*NGFLSS
Trigger: TGATGAAAGGAATCCGTTTCATAGGAAATGGGTATT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGAATACCCATTTCCTATaGAACGGATTCCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRNTHFL*NGFLSS
Trigger: TGATGAAAGGAATCCGTTTCATAGGAAATGGGTATT...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCGTCCCTTCTTCAACTaGAGTGCAAAATACTCTTCC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLRPFFN*SAKYSS
Trigger: GGAAGAGTATTTTGCACTTCAGTTGAAGAAGGGACG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCTCAATTACACCTCTaGCAACAGGTTCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSQLHL*QQVHPR
Trigger: CCTGGGATGAACCTGTTGTCAGAGGTGTAATTGAGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATTACTGCATAGTTTTTaGAGGGTAGCAAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLLHSF*RVASLS
Trigger: TGACAGGCTTGCTACCCTTCAAAAACTATGCAGTAA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGATGTTCAATGCATGTaGGCTCTCAGTACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPDVQCM*ALSTAS
Trigger: GCTGGCTGTACTGAGAGCTCACATGCATTGAACATC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTGCATGCTTGGACTCTaGAGGAATGTAAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLCMLGL*RNVNSK
Trigger: CTTGGAGTTTACATTCCTTCAGAGTCCAAGCATGCA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCACCCCAGCAGGTCGTaGGGGTCTTGTGGTAACTTC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSHPSRS*GSCGNF
Trigger: GAAGTTACCACAAGACCCTCACGACCTGCTGGGGTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAAGGAGATGTCCAGATaGCACGTACAGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLKEMSR*HVQLYC
Trigger: ACAGTACAGCTGTACGTGTCATCTGGACATCTCCTT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCCTGCACTAACTTTTaGGTTTTAGCGCATGGATAC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSCTNF*VLAHGY
Trigger: GTATCCATGCGCTAAAACTCAAAAGTTAGTGCAGGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATAGATTCAGGTTTTTaGCACCTCACTGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLIDSGF*HLTALQ
Trigger: CTGCAAGGCAGTGAGGTGTCAAAAACCTGAATCTAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGCAAATCTGGTTTCCTaGGGTGGAGTACGGCATTCT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTANLVS*GGVRHS
Trigger: AGAATGCCGTACTCCACCTCAGGAAACCAGATTTGC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGGGGACTCACTCCTTaGGGCACATCTTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGGLTP*GTSSFV
Trigger: AACAAAAGAAGATGTGCCTCAAGGAGTGAGTCCCCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGCTGCCTGCAGTGTCTaGCCTAGAAAAGGCTCGCTT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVAACSV*PRKGSL
Trigger: AAGCGAGCCTTTTCTAGGTCAGACACTGCAGGCAGC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCAGGAATTTCGGGGATaGGGATCCCTGGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQQEFRG*GSLVVS
Trigger: GGATACCACCAGGGATCCTCATCCCCGAAATTCCTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGATATTCGTAGAGTGTaGAAGGCCTCAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTDIRRV*KASGCL
Trigger: GAGACACCCTGAGGCCTTTCACACTCTACGAATATC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGATATTCGTAGAGTGTaGAAGGCCTCAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPDIRRV*KASGCL
Trigger: GAGACACCCTGAGGCCTTTCACACTCTACGAATATC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCGGCGGAAGAGAAACTaGCGATTCAAACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTRRKRN*RFKPEY
Trigger: GTACTCTGGTTTGAATCGTCAGTTTCTCTTCCGCCG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTCGGCCTGGATTGTCTaGTTTCCCCAAGCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSAWIV*FPQAFP
Trigger: GGGAAAAGCTTGGGGAAATCAGACAATCCAGGCCGA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTGTCCAGGCAGATTTTaGCACACTAGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPCPGRF*HTSCAT
Trigger: GGTTGCACAGCTAGTGTGTCAAAATCTGCCTGGACA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGGCTGGTTCGATCTTTaGCAAGAGGACTCAAAATAC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLGWFDL*QEDSKY
Trigger: GTATTTTGAGTCCTCTTGTCAAAGATCGAACCAGCC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTTCACTAAGATCTCCTaGGGACCCCTGGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDFTKIS*GPLACN
Trigger: ATTGCAGGCCAGGGGTCCTCAGGAGATCTTAGTGAA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCGTATTTCATACCTGTaGAATGGCTTCAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQRISYL*NGFSWF
Trigger: AAACCAGCTGAAGCCATTTCACAGGTATGAAATACG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCACAGCCTGTAGAGACTaGCGATCCCGTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSTACRD*RSRWAS
Trigger: GGAAGCCCAACGGGATCGTCAGTCTCTACAGGCTGT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAGGGAGGTCTTTCTCTaGTATATGGCTCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLREVFL*YMALCG
Trigger: TCCACAAAGAGCCATATATCAGAGAAAGACCTCCCT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCACTGTTGTGGCCCATaGTGGCTTCCCACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQHCCGP*WLPTVS
Trigger: ACTCACTGTGGGAAGCCATCATGGGCCACAACAGTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGCATTTATGATGTGTaGGTGATAACCCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLSIYDV*VITQEE
Trigger: TTCCTCCTGGGTTATCACTCACACATCATAAATGCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATCATGGATGCCAGCATaGTTTTTACATCAGTATATG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSWMPA*FLHQYM
Trigger: CATATACTGATGTAAAAATCATGCTGGCATCCATGA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCACCATTTTCTGGAAACTaGAGACACGTTCTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAPFSGN*RHVLRV
Trigger: TACTCTGAGAACGTGTCTGCAGTTTCCAGAAAATGG...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAGCTGTGACAAAAAGTaGTTCGGTCTGGGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSCDKK*FGLGVH
Trigger: GTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAAGCTGTGACAAAAAGTaGTTCGGTCTGGGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQSCDKK*FGLGVH
Trigger: GTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCT...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCACATTACACCTTGTTaGTCAGGTTTCAGCCATACA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQHITPC*SGFSHT
Trigger: TGTATGGCTGAAACCTGAGCAACAAGGTGTAATGTG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAATCAGCTGTGTCTCCTaGATCATTAGGAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAISCVS*IIRNAV
Trigger: TACTGCATTCCTAATGATGCAGGAGACACAGCTGAT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATCAGCTGTGTCTCCTaGATCATTAGGAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLISCVS*IIRNAV
Trigger: TACTGCATTCCTAATGATGCAGGAGACACAGCTGAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTACTGATTGCACTGCCTaGCAGACACGTGTCTCTTAC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPTDCTA*QTRVSY
Trigger: GTAAGAGACACGTGTCTGGCAGGCAGTGCAATCAGT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCATTCTGGCACTGATTaGACTGCCTGCCAGACACGT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDHSGTD*TACQTR
Trigger: ACGTGTCTGGCAGGCAGTGCAATCAGTGCCAGAATG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTGCAGTTACAGGGACTaGAGCCATCAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPCSYRD*SHQDPT
Trigger: AGTTGGATCCTGATGGCTGCAGTCCCTGTAACTGCA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCCCAGAGTGAGGATTaGAGAATTTGTTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLAQSED*RICSLS
Trigger: GCTCAGTGAACAAATTCTGCAATCCTCACTCTGGGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTTCAACATTGGGCTTaGAGATGCACTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLQHWA*RCTALS
Trigger: AGACAGGGCAGTGCATCTGCAAGCCCAATGTTGAAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCACTGTTACCCCTAATTTaGAAGGACATTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRALLPLI*KDIVLL
Trigger: CAACAGGACAATGTCCTTGCAAATTAGGGGTAACAG...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACTGTTACCCCTAATTTaGAAGGACATTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLLPLI*KDIVLL
Trigger: CAACAGGACAATGTCCTTGCAAATTAGGGGTAACAG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGCTGGAATGGAGTTTTaGTGCAACCCAATAGATTGT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLAGMEF*CNPIDC
Trigger: ACAATCTATTGGGTTGCAGCAAAACTCCATTCCAGC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGCTGGAATGGAGTTTTaGTGCAACCCAATAGATTGT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPAGMEF*CNPIDC
Trigger: ACAATCTATTGGGTTGCAGCAAAACTCCATTCCAGC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTCTTGTAACATTATCTaGTGGCTTCTCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPSCNII*WLLPGD
Trigger: ATCTCCTGGGAGAAGCCAGCAGATAATGTTACAAGA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTACAGCCCACATGTGTaGATGCACTTAGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQYSPHV*MHLVET
Trigger: AGTTTCTACTAAGTGCATGCACACATGTGGGCTGTA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTTGGATTTTCTAGGATaGTGCCAGGTGACCAACATC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLDFLG*CQVTNI
Trigger: GATGTTGGTCACCTGGCAGCATCCTAGAAAATCCAA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGGCTTGGATGGTGGTTaGCAAGAAATCACAACATAT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQGLDGG*QEITTY
Trigger: ATATGTTGTGATTTCTTGGCAACCACCATCCAAGCC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGTTGCATGAAGTCCTaGACTGTTGATGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGCMKS*TVDAVD
Trigger: GTCCACAGCATCAACAGTGCAGGACTTCATGCAACC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTGATGATTTGGTTGTaGCTCCTGTATTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLMIWL*LLYSAT
Trigger: GGTGGCCGAATACAGGAGGCACAACCAAATCATCAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAACACTCTAAATCGTTaGTCACAATCTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQNTLNR*SQSVCH
Trigger: GTGGCAGACAGATTGTGAGCAACGATTTAGAGTGTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCTGGGCAGAGGATCCTaGACTCTTTGGTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLGRGS*TLWFPS
Trigger: TGAAGGAAACCAAAGAGTGCAGGATCCTCTGCCCAG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCACAGCCAGCAACCGTaGAAGCTTTCAGCTGATATG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPHSQQP*KLSADM
Trigger: CATATCAGCTGAAAGCTTGCACGGTTGCTGGCTGTG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAGGCTCGCTTGAAGTaGACCCAGCAGATGTACAAG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKARLK*TQQMYK
Trigger: CTTGTACATCTGCTGGGTGCACTTCAAGCGAGCCTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAAGATCCATTGGGGCTaGTTCAGGTGTTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPKIHWG*FRCFDK
Trigger: TTTGTCAAAACACCTGAAGCAGCCCCAATGGATCTT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAATTTTATATTCACACTaGGTCCATGGTTGCAAACCT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLILYSH*VHGCKP
Trigger: AGGTTTGCAACCATGGACGCAGTGTGAATATAAAAT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCCTTCTGGAGGTGCTTaGAATGTCCTCACCACATTC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTPSGGA*NVLTTF
Trigger: GAATGTGGTGAGGACATTGCAAGCACCTCCAGAAGG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCGTGCAGGCTTGGAGTaGATAGCTATAGGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRAGLE*IAIGGK
Trigger: TTTTCCACCTATAGCTATGCACTCCAAGCCTGCACG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTACCCCCTTGGCTGTTaGTGGCAGTTACTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDYPLGC*WQLLCS
Trigger: GCTACACAGTAACTGCCAGCAACAGCCAAGGGGGTA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCACATCCCAGGGTGGTaGACGCTTGAATTCGTATTT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLHIPGW*TLEFVF
Trigger: AAATACGAATTCAAGCGTGCACCACCCTGGGATGTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCTGCTGGGTGGCCATaGCTTCGGATAGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSAGWP*LRIALS
Trigger: AGACAGTGCTATCCGAAGGCATGGCCACCCAGCAGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGCCCACCTCGTTGTGTaGCACCACTCTCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQAHLVV*HHSQLV
Trigger: TACAAGCTGAGAGTGGTGGCACACAACGAGGTGGGC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCACCAAGGATTAGGATaGAAGTTTGTGACCACTCCT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLHQGLG*KFVTTP
Trigger: AGGAGTGGTCACAAACTTGCATCCTAATCCTTGGTG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAAGCATGAGGGCATTTTaGAAACTCATTTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRASMRAF*KLICSE
Trigger: CTCTGAGCAAATGAGTTTGCAAAATGCCCTCATGCT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACATACTGCTTGGGTTaGCACGATGGAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTYCLG*HDGNFL
Trigger: AAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAATCCTTATTTCCGTTaGTTGTGGACTAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLNPYFR*LWTKEL
Trigger: CAGTTCTTTAGTCCACAACCAACGGAAATAAGGATT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAAGCACCACAATTCCTaGCAAAATATTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQKHHNS*QNIASP
Trigger: AGGACTGGCAATATTTTGCCAGGAATTGTGGTGCTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGAAACCTTATTTGCGTaGCTTTTACGAACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRETLFA*LLRTLE
Trigger: TTCAAGAGTTCGTAAAAGCCACGCAAATAAGGTTTC...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGAAACCTTATTTGCGTaGCTTTTACGAACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLETLFA*LLRTLE
Trigger: TTCAAGAGTTCGTAAAAGCCACGCAAATAAGGTTTC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTAGGCATCTATATGGCTaGCTTGTTGTGTCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIRHLYG*LVVSQL
Trigger: TAACTGCGACACAACAAGCCAGCCATATAGATGCCT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATGTAATGGCAGCTTTTaGAATGGCTGTTGCATTGAC +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRACNGSF*NGCCID
Trigger: GTCAATGCAACAGCCATTCCAAAAGCTGCCATTACA...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGTAATGGCAGCTTTTaGAATGGCTGTTGCATTGAC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQCNGSF*NGCCID
Trigger: GTCAATGCAACAGCCATTCCAAAAGCTGCCATTACA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGTTTGCAAACATCTATaGCCGAAGGATCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLVCKHL*PKDLHQ
Trigger: TTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAAC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCCATGGAGGTTACACTaGCAGGGCTCACATCCAACA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLPWRLH*QGSHPT
Trigger: TGTTGGATGTGAGCCCTGCCAGTGTAACCTCCATGG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGCACTGGCCACTGATTaGGTCACAAATGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVALATD*VTNGPR
Trigger: CCTGGGACCATTTGTGACCCAATCAGTGGCCAGTGC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAACGTTGCCCAGCAATaGAAGCATCTTGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLNVAQQ*KHLGKH
Trigger: GTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCCAAGTGGCTTGCACTaGGAACACAAGCATCACACT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPPSGLH*EHKHHT
Trigger: AGTGTGATGCTTGTGTTCCCAGTGCAAGCCACTTGG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGATCGTACTTGGCAAATaGAACCAGATTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQIVLGK*NQIPDG
Trigger: ACCATCTGGAATCTGGTTCCATTTGCCAAGTACGAT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTGTAACATTATCTGCTaGCTTCTCCCAGGAGATATT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSCNIIC*LLPGDI
Trigger: AATATCTCCTGGGAGAAGCCAGCAGATAATGTTACA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAGTTGGCACACTTTGTaGAGCTGCTCCTGTTGTACG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSWHTL*SCSCCT
Trigger: CGTACAACAGGAGCAGCTCCACAAAGTGTGCCAACT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTACCATTTGCCTTTTTaGGTGGGTTCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLYHLPF*VGSRRA
Trigger: TGCTCTCCTGGAACCCACCCAAAAAGGCAAATGGTA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGCACTTAGTAGAAACTaGTGGGGTGTAAATACTGCT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPALSRN*WGVNTA
Trigger: AGCAGTATTTACACCCCACCAGTTTCTACTAAGTGC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCCAGAGCACAACCTTTaGCCGTGCATGCTTGGACTC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVPEHNL*PCMLGL
Trigger: GAGTCCAAGCATGCACGGCCAAAGGTTGTGCTCTGG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGTAGTTATTACCTACTaGGTCTACATAGAATATCCC +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLVVITY*VYIEYP
Trigger: GGGATATTCTATGTAGACCCAGTAGGTAATAACTAC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGACCTCATCTGGAGTTaGTATCTGGGAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDDLIWS*YLGEPG
Trigger: TCCTGGCTCTCCCAGATACCAACTCCAGATGAGGTC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTAGAAATCCATGGGTaGAGTCGCCAGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLEIHG*SRQTSS
Trigger: AGATGAGGTCTGGCGACTCCACCCATGGATTTCTAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCACTGCCAAATCCATTaGAGGCAACCAACCGAAACA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLHCQIH*RQPTET
Trigger: TGTTTCGGTTGGTTGCCTCCAATGGATTTGGCAGTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATTCATATTTTGTCCATaGGCTAAGAGCAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLFIFCP*AKSRSL
Trigger: AAGACTTCTGCTCTTAGCCCATGGACAAAATATGAA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCAAATTAGGTCCATTTaGCTTGGATGGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLQIRSI*LGWWLP
Trigger: TGGCAACCACCATCCAAGCCAAATGGACCTAATTTG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCACTGTTGATGCTGTaGACTCCATTGAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLALLML*TPLKTE
Trigger: CTCTGTCTTCAATGGAGTCCACAGCATCAACAGTGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACGAATTGTGGGTGTTaGTATATCACTTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTNCGC*YITWSV
Trigger: GACACTCCAAGTGATATACCAACACCCACAATTCGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCCATTTGGCTTCCGTaGAGACACCCAATCAATTTG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLAIWLP*RHPINL
Trigger: CAAATTGATTGGGTGTCTCCACGGAAGCCAAATGGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGCGATGTCCAGGCTTaGGGTTATAGAGCACTCCGT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSDVQA*GYRALR
Trigger: ACGGAGTGCTCTATAACCCCAAGCCTGGACATCGCT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATTGTGCTGTTCATCTaGACAGCATACTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLIVLFI*TAYFTW
Trigger: CCAGGTGAAGTATGCTGTCCAGATGAACAGCACAAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGACAACAGAACATACCTaGAAGGCGATTGTACACCAC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLTTEHT*KAIVHH
Trigger: GTGGTGTACAATCGCCTTCCAGGTATGTTCTGTTGT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCAACTACCTTGCTACTaGTGGCACAGCCAGCAACCG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVQLPCY*WHSQQP
Trigger: CGGTTGCTGGCTGTGCCACCAGTAGCAAGGTAGTTG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTCTCCGGAACTCCTTaGGTAGTAGCTGCAACTACC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLSGTP*VVAATT
Trigger: GGTAGTTGCAGCTACTACCCAAGGAGTTCCGGAGAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCAGTGGTGTCAGTGTaGATGAGACCTTTCCCAACC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSVVSV*MRPFPT
Trigger: GGTTGGGAAAGGTCTCATCCACACTGACACCACTGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAAGTGTATCTGCTATTaGGCTCCAGGTTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSKCICY*APGFYQ
Trigger: CTGATAAAAACCTGGAGCCCAATAGCAGATACACTT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGATGAGGATCCCTGGTaGTATCCAAGCTACAAATAT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQDEDPW*YPSYKY
Trigger: ATATTTGTAGCTTGGATACCACCAGGGATCCTCATC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGGGATGAGGATCCCTaGTGGTATCCAAGCTACAAA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGDEDP*WYPSYK
Trigger: TTTGTAGCTTGGATACCACCAGGGATCCTCATCCCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAATTTTCCAGAAGGGTaGATTGATGATGACCAACGG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQNFPEG*IDDDQR
Trigger: CCGTTGGTCATCATCAATCCACCCTTCTGGAAAATT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGCCAGCTGAGAGTCTaGAGGGGCTTCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSQLRV*RGFICP
Trigger: TGGACAGATGAAGCCCCTCCAGACTCTCAGCTGGCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATTAGACTGTTCTGGTaGGATCCAGGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLIRLFW*DPGNQQ
Trigger: CTGCTGATTTCCTGGATCCCACCAGAACAGTCTAAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCTATACTCCACACCTaGGGTGAGAGTAAAATCACG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLAILHT*GESKIT
Trigger: CGTGATTTTACTCTCACCCCAGGTGTGGAGTATAGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCCCCTTGGCTGTTGCTaGCAGTTACTGTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTPLGCC*QLLCSY
Trigger: ATAGCTACACAGTAACTGCCAGCAACAGCCAAGGGG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTGTTTCTATTTGGCTaGGAGTACAGGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLFLFG*EYRGGL
Trigger: CAGCCCTCCCCTGTACTCCCAGCCAAATAGAAACAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCTCTCAGCTTGTATGTaGTGTAGGGCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQLSACM*CRAGDP
Trigger: GGGGTCTCCAGCCCTACACCACATACAAGCTGAGAG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGCTGTCCACCGAAAATaGGGCTCGGTACTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVAVHRK*GSVLRQ
Trigger: TTGCCTCAGTACCGAGCCCCATTTTCGGTGGACAGC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGTCGTGCAGATGACCTaGAAAAAGAAGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLVVQMT*KKKVLS
Trigger: GGACAAAACCTTCTTTTTCCAGGTCATCTGCACGAC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATTTGACACTTATGGTTaGCAAACTTTGTCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLFDTYG*QTLSRS
Trigger: ACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGCAGGGTACTTTAAGTaGTGTTGCGATACTCCATTT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLAGYFK*CCDTPF
Trigger: AAATGGAGTATCGCAACATCACTTAAAGTACCCTGC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGATCAACATTTCAATaGCCTGAAACAAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLRSTFQ*PETRSQ
Trigger: CTGGCTTCTTGTTTCAGGTCATTGAAATGTTGATCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAACGATGGAAACTTTCTTaGAAGCTCCCACGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQRWKLS*KLPRSP
Trigger: TGGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCG...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAAAAGCTGAAGACAGTTaGCAGAATCAGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAKAEDS*QNQVFP
Trigger: TGGAAAAACCTGATTCTGTCAACTGTCTTCAGCTTT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTGGCCTGAATTTTGGTaGCAGGTAATATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLWPEFW*QVISPS
Trigger: GGATGGAGATATTACCTGTCACCAAAATTCAGGCCA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCACACTGCCCAGAGTaGGGATTGCAGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSHCPE*GLQNLF
Trigger: GAACAAATTCTGCAATCCTCACTCTGGGCAGTGTGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGGCCTTACAATTGGTaGCATCTAACCCATAAAAGT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLRPYNW*HLTHKS
Trigger: ACTTTTATGGGTTAGATGTCACCAATTGTAAGGCCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAGGACATTGTCCTGTTaGTTTGTTACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLRTLSC*FVTQQR
Trigger: TCTCTGCTGTGTAACAAATCAACAGGACAATGTCCT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACACATCTGGCAGTGTTaGAAATTGTCAATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLHIWQC*KLSMVK
Trigger: TTTGACCATTGACAATTTTCAACACTGCCAGATGTG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTACACCTTCTTCCTTaGCGATTAGGCACACACAGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLHLLP*RLGTHR
Trigger: CCTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGGCTATTACAGATGTaGTTAACTGCACCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLRLLQM*LTAPVV
Trigger: TACAACTGGTGCAGTTAATCACATCTGTAATAGCCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACAAGCATCACACTTTaGGCCAGTGACAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPTSITL*ASDKLF
Trigger: AAACAATTTGTCACTGGCTCAAAGTGTGATGCTTGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTATAGCAGAAGAACTTTaGACTTGTCCTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPIAEEL*TCPLGG
Trigger: TCCGCCCAGAGGACAAGTTCAAAGTTCTTCTGCTAT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGTTTTGTCTTGTAAGTaGCAGCTACACTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLVLSCK*QLHSLL
Trigger: CAACAAGGAGTGTAGCTGTCACTTACAAGACAAAAC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAAAGTGTCACAGAGTCTaGGCCAATAGGAATGATATA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAKCHRV*ANRNDI
Trigger: TATATCATTCCTATTGGCTCAGACTCTGTGACACTT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAAGTGTCACAGAGTCTaGGCCAATAGGAATGATATA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQKCHRV*ANRNDI
Trigger: TATATCATTCCTATTGGCTCAGACTCTGTGACACTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGAGACCATTCTACATaGAGTTCTGTAGAACTGATT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLGDHST*SSVELI
Trigger: AATCAGTTCTACAGAACTTCATGTAGAATGGTCTCC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTCACAGCTAAGACTCTaGACTCATACTTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLISQLRL*THTWCM
Trigger: CATACACCAAGTATGAGTTCAGAGTCTTAGCTGTGA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTGAAGGAGGGATCATaGATACAGGTGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLKEGS*IQVLIL
Trigger: GAGAATCAGCACCTGTATTCATGATCCCTCCTTCAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAGTTACTTCCACTGGTaGCCCCTGAGGATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSYFHW*PLRIKK
Trigger: CTTTTTGATCCTCAGGGGTCACCAGTGGAAGTAACT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGATATCCCATCCAGAGTaGTTTGGCCAAAAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLISHPE*FGQKPD
Trigger: ATCAGGCTTTTGGCCAAATCACTCTGGATGGGATAT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTCTCAGGATCCTTCCTaGGGATGGTATAACTTCGCG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSQDPS*GWYNFA
Trigger: CGCGAAGTTATACCATCCTCAGGAAGGATCCTGAGA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCCTGCTCCTAGGAACTaGGCTCCCTCATTTAATGAA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPPAPRN*APSFNE
Trigger: TTCATTAAATGAGGGAGCTCAGTTCCTAGGAGCAGG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCATAGAATATCCCAGTaGAAAGGACTGAGTGTGTTA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQHRISQ*KGLSVL
Trigger: TAACACACTCAGTCCTTTTCACTGGGATATTCTATG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGAACCAGCCCATCGATaGGCACCCAAAGGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVEPAHR*APKGLS
Trigger: AGACAAACCTTTGGGTGCTCATCGATGGGCTGGTTC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGAACCAGCCCATCGATaGGCACCCAAAGGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQEPAHR*APKGLS
Trigger: AGACAAACCTTTGGGTGCTCATCGATGGGCTGGTTC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGACCAACATCATTCTTaGCTTCACATCCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQDQHHS*LHIQKN
Trigger: ATTCTTCTGGATGTGAAGTCAAGAATGATGTTGGTC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCACCTTGTAGGTCTTaGACAGTTGGTTTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSPCRS*TVGLAH
Trigger: GTGGGCTAAACCAACTGTTCAAGACCTACAAGGTGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCTTTAGGTGGCCAATaGCATGAGAGTTTACATCTG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLALGGQ*HESLHL
Trigger: CAGATGTAAACTCTCATGTCATTGGCCACCTAAAGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAACACCATTTGGGTTTaGAGGAGATGTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLNTIWV*RRCPDD
Trigger: GTCATCTGGACATCTCCTTCAAACCCAAATGGTGTT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGACACCCAATCAATTTaGAGAGATCTTGAAGTGATG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQDTQSI*RDLEVM
Trigger: CATCACTTCAAGATCTCTTCAAATTGATTGGGTGTC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAACACATTTCTTCAATTaGTGCCTTCCCTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLTHFFN*CLPCGI
Trigger: AATTCCACAGGGAAGGCATCAATTGAAGAAATGTGT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCTCTCACAGCTTTGCTaGGTCCTCGCCCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSLSQLC*VLAHSC
Trigger: ACAGCTATGGGCGAGGACTCAGCAAAGCTGTGAGAG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGCTGCCTGCAGTGTCTaGCCTAGAAAAGGCTCGCTT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSAACSV*PRKGSL
Trigger: AAGCGAGCCTTTTCTAGGTCAGACACTGCAGGCAGC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAATCTCTATGCAAGCTaGCCCCAGTGCCTTAAGAAC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTNLYAS*PQCLKN
Trigger: GTTCTTAAGGCACTGGGGTCAGCTTGCATAGAGATT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCGGCGGAAGAGAAACTaGCGATTCAAACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRRKRN*RFKPEY
Trigger: GTACTCTGGTTTGAATCGTCAGTTTCTCTTCCGCCG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTCAGTGTGTAGAGAGTaGAAGGATCCAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSVCRE*KDPGGG
Trigger: TCCGCCGCCTGGATCCTTTCACTCTCTACACACTGA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACTTCATCAGTGTAATTaGAAGTCACAGGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLHQCN*KSQDQS
Trigger: GCTTTGATCCTGTGACTTTCAATTACACTGATGAAG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAAAGATCTGGAGGGCTaGCTTCTGATGGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVKDLEG*LLMEQP
Trigger: AGGCTGCTCCATCAGAAGTCAGCCCTCCAGATCTTT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTGCACTGTGGGCGGTaGCCAACATACATTCATTTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLHCGR*PTYIHL
Trigger: CAAATGAATGTATGTTGGTCACCGCCCACAGTGCAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCGTATTTCATACCTGTaGAATGGCTTCAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLRISYL*NGFSWF
Trigger: AAACCAGCTGAAGCCATTTCACAGGTATGAAATACG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCTCAGGGGTCTGTATaGATGTCCAGTCACTTGATG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSQGSV*MSSHLM
Trigger: CATCAAGTGACTGGACATTCATACAGACCCCTGAGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGATACTCATACTCTGTaGAAGGCAATAGTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLDTHTL*KAIVRN
Trigger: ATTCCGAACTATTGCCTTTCACAGAGTATGAGTATC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCGTCAGTCGTGCAGATaGCCTGGAAAAAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTRQSCR*PGKRRF
Trigger: AAACCTTCTTTTTCCAGGTCATCTGCACGACTGACG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGGCTGGTTTGGTTTTaGCTCGGGATGCGCAGGACA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSRLVWF*LGMRRT
Trigger: TGTCCTGCGCATCCCGAGTCAAAACCAAACCAGCCT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAAGACTTTCTTGTCTTaGATGTCCATGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLKTFLS*MSMSWL
Trigger: CAGCCAGCTCATGGACATTCAAGACAAGAAAGTCTT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGGTGACAGACATTTTTaGACCGTAATTGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPGDRHF*TVIGTV
Trigger: AACAGTACCAATTACGGTTCAAAAATGTCTGTCACC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCAGGTAAAGTATTCTaGAGAGCAAACACTTGGTTA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPGKVF*RANTWL
Trigger: TAACCAAGTGTTTGCTCTGCAGAATACTTTACCTGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGTTGCCTGGCAACGCTaGTGTAACCCCTGGTTACTC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSVAWQR*CNPWLL
Trigger: GAGTAACCAGGGGTTACAGCAGCGTTGCCAGGCAAC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCACATTACACCTTGTTaGTCAGGTTTCAGCCATACA +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIHITPC*SGFSHT
Trigger: TGTATGGCTGAAACCTGAGCAACAAGGTGTAATGTG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCAAACCATTTACTGTaGGATAATAAAACATGGTCT +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLANHLL*DNKTWS
Trigger: AGACCATGTTTTATTATCGCACAGTAAATGGTTTGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGCAAACCATTTACTGTaGGATAATAAAACATGGTCT +
Preference number: 4 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRANHLL*DNKTWS
Trigger: AGACCATGTTTTATTATCGCACAGTAAATGGTTTGC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCAATGTGATTGGGCATaGAATCTGAGAAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLQCDWA*NLRRSP
Trigger: TGGAGATCTTCTCAGATTGCATGCCCAATCACATTG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATCAGCTGTGTCTCCTaGATCATTAGGAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLISCVS*IIRNAV
Trigger: TACTGCATTCCTAATGATGCAGGAGACACAGCTGAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGGTGATTTCGTCCACTaGATAATATCTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLGDFVH*IISVSE
Trigger: CTCAGACACAGATATTATGCAGTGGACGAAATCACC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCACAGTCACAGGGTTTaGAAACATCTATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTHSHRV*KHLWPK
Trigger: CTTCGGCCATAGATGTTTGCAAACCCTGTGACTGTG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCATTCTGGCACTGATTaGACTGCCTGCCAGACACGT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQHSGTD*TACQTR
Trigger: ACGTGTCTGGCAGGCAGTGCAATCAGTGCCAGAATG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCTGTCCCAGAGGTATTaGAGTTACAGGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLSQRY*SYRDCS
Trigger: GCTGCAGTCCCTGTAACTGCAATACCTCTGGGACAG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCTGTCCCAGAGGTATTaGAGTTACAGGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQLSQRY*SYRDCS
Trigger: GCTGCAGTCCCTGTAACTGCAATACCTCTGGGACAG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCTCCAAACATTTATTaGACTGTCTCCCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPPPNIY*TVSLQH
Trigger: ATGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGGCAGCCAGTGGCATTaGCTGGAGAAATATAAAAAC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLGSQWH*LEKYKN
Trigger: GTTTTTATATTTCTCCAGGCAATGCCACTGGCTGCC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCATTGGTCACAACGTTaGCCAGCAATGGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTHWSQR*PAMEAS
Trigger: AGATGCTTCCATTGCTGGGCAACGTTGTGACCAATG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCAAAGTAATGGTCTTTaGATTGGTCACAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLQSNGL*IGHNVA
Trigger: GGCAACGTTGTGACCAATGCAAAGACCATTACTTTG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAATACTCTTCCTGATTaGCAGGTGATGCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLNTLPD*QVMLQR
Trigger: TCTTTGCAGCATCACCTGGCAATCAGGAAGAGTATT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCGGACTCCGATGCATaGTTCATCAGTCCATTCACA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPDSDA*FISPFT
Trigger: TGTGAATGGACTGATGAAGCATGCATCGGAGTCCGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTACTGAACCTCCTTCATaGGAGGCTATCACTCGATAC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPTEPPS*EAITRY
Trigger: GTATCGAGTGATAGCCTCGCATGAAGGAGGTTCAGT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTACAGCCAGCCAAAGTaGAAGCAGTTAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTYSQPK*KQLGLL
Trigger: CAGTAACCCTAACTGCTTGCACTTTGGCTGGCTGTA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCCAGGTTTGTCCTCTaGGGTCATGAATGGAATCCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSRFVL*GHEWNP
Trigger: TGGATTCCATTCATGACCGCAGAGGACAAACCTGGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGGGTGGGTAGGGGGTTaGCAAGATATAATCACAGAT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPGWVGG*QDIITD
Trigger: ATCTGTGATTATATCTTGGCAACCCCCTACCCACCC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAGCACTGCTGTTTGTaGCTCCATGAAGAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKHCCL*LHEECS
Trigger: TGAGCACTCTTCATGGAGGCACAAACAGCAGTGCTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGACACCTCACTGCCTTaGAGAGCTCATCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDDTSLP*RAHHSD
Trigger: ATCAGAGTGATGAGCTCTGCAAGGCAGTGAGGTGTC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTGCTCACAATCTGTCTaGCACAGCACTTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDCSQSV*HSTSGH
Trigger: ATGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAACACTCTAAATCGTTaGTCACAATCTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLNTLNR*SQSVCH
Trigger: GTGGCAGACAGATTGTGAGCAACGATTTAGAGTGTT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGACCTGTGACCGTATaGTGTCTCCTGTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRPVTV*CLLSVV
Trigger: CACCACTGACAGGAGACAGCATACGGTCACAGGTCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAATTCTGCTCCTCACTaGCACCCAGGAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPNSAPH*HPGKAS
Trigger: ACTTGCTTTTCCTGGGTGGCAGTGAGGAGCAGAATT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTATCAGTGAAATTCTaGTCCTCACTGCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLSVKF*SSLPPR
Trigger: CCTGGGTGGCAGTGAGGAGCAGAATTTCACTGATAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCAGACTCCTCTTCAATaGCAGCAGGGCGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDQTPLQ*QQGVCK
Trigger: TTTACAGACGCCCTGCTGGCATTGAAGAGGAGTCTG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTTCTCCTGCATGGTTTaGAGCCACAACACCAATGCG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDFSCMV*SHNTNA
Trigger: CGCATTGGTGTTGTGGCTGCAAACCATGCAGGAGAA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTTCCCTCGAAGCATCTaGGAATCACTTCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLFPRSI*ESLHSE
Trigger: TTCGCTATGAAGTGATTCGCAGATGCTTCGAGGGAA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCTTCTGGAGGTGCTTaGAATGTCCTCACCACATTC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPSGGA*NVLTTF
Trigger: GAATGTGGTGAGGACATTGCAAGCACCTCCAGAAGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCTGAGCCTGTGACTTaGAATGTTGGAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSEPVT*NVGESM
Trigger: CATGGACTCTCCAACATTGCAAGTCACAGGCTCAGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCACATCCCAGGGTGGTaGACGCTTGAATTCGTATTT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTHIPGW*TLEFVF
Trigger: AAATACGAATTCAAGCGTGCACCACCCTGGGATGTG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGGTTGCATCAAAGGTaGAATCTCAGGGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGLHQR*NLRGLY
Trigger: ATACAGACCCCTGAGATTGCACCTTTGATGCAACCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAGATGTGGAGGGGGTTaGATCAAAGGTGCAATCTCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTRCGGG*IKGAIS
Trigger: TGAGATTGCACCTTTGATGCAACCCCCTCCACATCT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGACTGGGGGCTTTTCCTaGAGAATTCACTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQTGGFS*RIHCPD
Trigger: GTCTGGGCAGTGAATTCTGCAGGAAAAGCCCCCAGT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAGTTTGTCGACCTGGTaGAAAGTTTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPSLSTW*KVWDSF
Trigger: AAATGAATCCCAAACTTTGCACCAGGTCGACAAACT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCGGTGTGTTCATGGATaGCAGCATGATTTTTACATC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLRCVHG*QHDFYI
Trigger: GATGTAAAAATCATGCTGGCATCCATGAACACACCG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGTTTTGCAAACTCATTTaGTCAGAGAACACAGTGAAT +
Preference number: 4 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRFCKLI*SENTVN
Trigger: ATTCACTGTGTTCTCTGAGCAAATGAGTTTGCAAAA...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTGCAGAGCAAACACTTaGTTACCTGAAGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTCRANT*LPEAQS
Trigger: GCTCTGAGCTTCAGGTAACCAAGTGTTTGCTCTGCA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCCTCAGTGTGACAAATaGCTCTTCAACAGGACCGCT +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLPQCDK*LFNRTA
Trigger: AGCGGTCCTGTTGAAGAGCCATTTGTCACACTGAGG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGACATACTGCTTGGGTTaGCACGATGGAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLTYCLG*HDGNFL
Trigger: AAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAAAAGTGCTTCGGTCTaGGAGTCCACATACTGCTTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTKSASV*ESTYCL
Trigger: CAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAATTGCCACGGGAATATaGAGTAAAATTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAIATGI*SKIGKL
Trigger: CAGCTTTCCAATTTTACTCCATATTCCCGTGGCAAT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCCAGGACGATAATTTaGTCCAGGTGTCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSRTII*SRCQDA
Trigger: AGCATCCTGACACCTGGACCAAATTATCGTCCTGGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATCCAGGACGATAATTTaGTCCAGGTGTCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQSRTII*SRCQDA
Trigger: AGCATCCTGACACCTGGACCAAATTATCGTCCTGGA...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGAAACCTTATTTGCGTaGCTTTTACGAACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSETLFA*LLRTLE
Trigger: TTCAAGAGTTCGTAAAAGCCACGCAAATAAGGTTTC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGGCATCTATATGGCTaGCTTGTTGTGTCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRHLYG*LVVSQL
Trigger: TAACTGCGACACAACAAGCCAGCCATATAGATGCCT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATCAGTGAAGCTCTCCTaGGAGCAGAGGCATCTATAT +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQSVKLS*EQRHLY
Trigger: ATATAGATGCCTCTGCTCCCAGGAGAGCTTCACTGA...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATATGGCAGGCAGCCAGTaGCATTGCCTGGAGAAATAT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDMAGSQ*HCLEKY
Trigger: ATATTTCTCCAGGCAATGCCACTGGCTGCCTGCCAT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCCTTTAACCAGAGGTaGCCTCAGTTGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSFNQR*PQLCWC
Trigger: GCACCAGCACAACTGAGGCCACCTCTGGTTAAAGGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATACTACCATTCAGGATaGCAGAGGAACCTGTATATA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLYYHSG*QRNLYI
Trigger: TATATACAGGTTCCTCTGCCATCCTGAATGGTAGTA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCTTAGTAGAAACTGGTaGGGTGTAAATACTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLSRNW*GVNTAK
Trigger: TTTAGCAGTATTTACACCCCACCAGTTTCTACTAAG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGCACTGTTGATGCTGTaGACTCCATTGAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPALLML*TPLKTE
Trigger: CTCTGTCTTCAATGGAGTCCACAGCATCAACAGTGC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCTGGTTTCCTGAGGTaGAGTACGGCATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSGFLR*STAFCH
Trigger: GTGGCAGAATGCCGTACTCCACCTCAGGAAACCAGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACAACAGAACATACCTaGAAGGCGATTGTACACCAC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTTEHT*KAIVHH
Trigger: GTGGTGTACAATCGCCTTCCAGGTATGTTCTGTTGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGCTTCCATAGATGCTaGGCAGAGGATCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGFHRC*AEDPAL
Trigger: GAGTGCAGGATCCTCTGCCCAGCATCTATGGAAGCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATCACAGTGCAAATGTaGCTGGTAAAGTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPITVQM*LVKLKS
Trigger: TGACTTCAACTTTACCAGCCACATTTGCACTGTGAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCAACCTGCCTGATCTaGTACTCTTTAATGACGCCG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPTCLI*YSLMTP
Trigger: CGGCGTCATTAAAGAGTACCAGATCAGGCAGGTTGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGCTGTAGTTGGTGTATaGCTGGAGACCTGTGACCGT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQAVVGV*LETCDR
Trigger: ACGGTCACAGGTCTCCAGCCATACACCAACTACAGC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAAGTGTATCTGCTATTaGGCTCCAGGTTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQKCICY*APGFYQ
Trigger: CTGATAAAAACCTGGAGCCCAATAGCAGATACACTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAATTATTTTTCCATTTaGGTTAACAGGCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLNYFSI*VNRLRP
Trigger: TGGTCTGAGCCTGTTAACCCAAATGGAAAAATAATT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGTGCATAGCTATAGGTaGAAAAAGGAAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPVHSYR*KKEEAL
Trigger: AAGAGCTTCTTCCTTTTTCCACCTATAGCTATGCAC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGAGTCCATGTTCTCTaGCAGGGCCTCCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQRVHVL*QGLHCP
Trigger: TGGACAATGGAGGCCCTGCCAGAGAACATGGACTCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTCAAAATACCCCCTTaGCTGTTGCTGGCAGTTACT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLKIPP*LLLAVT
Trigger: AGTAACTGCCAGCAACAGCCAAGGGGGTATTTTGAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCTCCTGAGGACCCCTaGCCTGCAATTTTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSPEDP*PAILEV
Trigger: AACCTCCAAAATTGCAGGCCAGGGGTCCTCAGGAGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCAAAACTTTTCCATTTaGCTGCAGCGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTQNFSI*LQRSCP
Trigger: TGGACAGGACCGCTGCAGCCAAATGGAAAAGTTTTG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTACTTTGTTTCTATTTaGCTGGGAGTACAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLYFVSI*LGVQGR
Trigger: CCTCCCCTGTACTCCCAGCCAAATAGAAACAAAGTA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCGGTATGTAGAGGGTaGTGTCCAAGCCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSVCRG*CPSRCT
Trigger: TGTACAGCGGCTTGGACACCACCCTCTACATACCGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGATGGTTTTCCCCCGGTaGGTAAACATTCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLMVFPR*VNIQWR
Trigger: TCTCCATTGAATGTTTACCCACCGGGGGAAAACCAT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATTTCTTCCAGATTGTaGAACATCAGTGGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPISSRL*NISGSQ
Trigger: TTGAGACCCACTGATGTTCCACAATCTGGAAGAAAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCGCTGGGTACAGAACTaGATACTTTCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRWVQN*ILSAAA
Trigger: TGCTGCTGCTGAAAGTATTCAGTTCTGTACCCAGCG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCTGTATGGGCAATCCTaGATACAAAACCGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLLYGQS*IQNRWV
Trigger: TACCCAGCGGTTTTGTATTCAGGATTGCCCATACAG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGTGTAGGTAGGGTGTaGAGATCTGTATGGGCAATC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSVGRV*RSVWAI
Trigger: GATTGCCCATACAGATCTTCACACCCTACCTACACT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGACCTGCACACTAAGATaGATCCATTTCTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLTCTLR*IHFFTR
Trigger: TCTTGTGAAGAAATGGATTCATCTTAGTGTGCAGGT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGCATTGAAAGGTGTATaGTCCTTCTCCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDALKGV*SFSTPL
Trigger: CAATGGCGTGGAGAAGGATCATACACCTTTCAATGC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATTAGAGTTCTTGCATTaGAAGGTGTATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLLEFLH*KVYDPS
Trigger: AGAAGGATCATACACCTTTCAATGCAAGAACTCTAA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTTCAGGATTCAACCGTaGCACTCTATTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLFRIQP*HSIISC
Trigger: ACAGCTGATAATAGAGTGTCACGGTTGAATCCTGAA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCAACATCATTATCATTaGCAAAAGAGAGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIQHHYH*QKREDG
Trigger: CCCATCCTCTCTCTTTTGTCAATGATAATGATGTTG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGACAAGGTTTACAATTaGAAGCGTAAACTTGATCAC +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQDKVYN*KRKLDH
Trigger: GTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAATCCAAAATTGCAATaGTCACACCTAAGCCCAATA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLNPKLQ*SHLSPI
Trigger: TATTGGGCTTAGGTGTGATCATTGCAATTTTGGATT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAAATCCAAAATTGCAATaGTCACACCTAAGCCCAATA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRANPKLQ*SHLSPI
Trigger: TATTGGGCTTAGGTGTGATCATTGCAATTTTGGATT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTTCATTCAAGGCTCCTaGGAGATGACAATTACAAGG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLFIQGS*EMTITR
Trigger: CCTTGTAATTGTCATCTCTCAGGAGCCTTGAATGAA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCATAGCAGAAGAACTTTaGACTTGTCCTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLIAEEL*TCPLGG
Trigger: TCCGCCCAGAGGACAAGTTCAAAGTTCTTCTGCTAT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCTATGGGACCAGATTaGTTTGAGAGTGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSMGPD*FESVVQ
Trigger: CTGGACAACACTCTCAAATCAATCTGGTCCCATAGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGATTCTACAAATGAATaGGGACTGAGCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTDSTNE*GLSQPL
Trigger: CAGTGGTTGGCTCAGTCCTCATTCATTTGTAGAATC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGGCCGATTCTACAAATaGATGAGGACTGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQGRFYK*MRTEPT
Trigger: GGTTGGCTCAGTCCTCATTCATTTGTAGAATCGGCC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGTTCAGAAAGCATATTaGTGTCATACCCCACAACTT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLVQKAY*CHTPQL
Trigger: AAGTTGTGGGGTATGACATCAATATGCTTTCTGAAC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGGTCACACAACCAACTaGATTGCAGAGAGTAATAGT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLGHTTN*IAESNS
Trigger: ACTATTACTCTCTGCAATTCAGTTGGTTGTGTGACC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTCTCTCCTTTCCAGCTaGTATATAGGAGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSLLSS*YIGEGP
Trigger: TGGACCCTCTCCTATATATCAGCTGGAAAGGAGAGA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCTCTCTCCTTTCCAGCTaGTATATAGGAGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLSLLSS*YIGEGP
Trigger: TGGACCCTCTCCTATATATCAGCTGGAAAGGAGAGA...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCTCAGGATCCTTCCTaGGGATGGTATAACTTCGCG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSQDPS*GWYNFA
Trigger: CGCGAAGTTATACCATCCTCAGGAAGGATCCTGAGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGCTGTTATACACGTTaGTTTGTTCTTCAGAACTCT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSCYTR*FVLQNS
Trigger: AGAGTTCTGAAGAACAAATCAACGTGTATAACAGCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCTGCTCCTAGGAACTaGGCTCCCTCATTTAATGAA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPAPRN*APSFNE
Trigger: TTCATTAAATGAGGGAGCTCAGTTCCTAGGAGCAGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCAATCACTATATACTaGACCTCCTTCATGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPITIY*TSFMRG
Trigger: GCCTCGCATGAAGGAGGTTCAGTATATAGTGATTGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCGTAAGCACGATAGCTaGGTTCTGAGGAATTGTGGA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRKHDS*VLRNCG
Trigger: TCCACAATTCCTCAGAACTCAGCTATCGTGCTTACG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGTACCCATTACCCCCTaGGCAAGCAACAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSVPITP*ASNNGD
Trigger: GTCACCATTGTTGCTTGCTCAGGGGGTAATGGGTAC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATCTTCTGGGGGATTTaGTGCAAGTGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQIFWGI*CKWLLD
Trigger: ATCCAGCAGCCACTTGCATCAAATCCCCCAGAAGAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAGCCACTGAGTTCCTaGATAAATATTGTGCCACCG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKPLSS*INIVPP
Trigger: CGGTGGCACAATATTTATTCAGGAACTCAGTGGCTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCGCAAGTGGTTGCATaGAGTCCTGCACTGTTGATG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSQVVA*SPALLM
Trigger: CATCAACAGTGCAGGACTTCATGCAACCACTTGCGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGATCATATCCAAGAATaGTGCCATTTGGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTDHIQE*CHLASV
Trigger: CACGGAAGCCAAATGGCATCATTCTTGGATATGATC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCCTGCACTAACTTTTaGGTTTTAGCGCATGGATAC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSCTNF*VLAHGY
Trigger: GTATCCATGCGCTAAAACTCAAAAGTTAGTGCAGGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTTCCCTGTGGAATTGTaGGACCCTCTTATCACAGTG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDFPVEL*DPLITV
Trigger: CACTGTGATAAGAGGGTCTCACAATTCCACAGGGAA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATATCAGAGAAGCTCAGTaGTGTTCCCCGAAAACGTTC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDIREAQ*CSPKTF
Trigger: GAACGTTTTCGGGGAACATCACTGAGCTTCTCTGAT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCCAGGTTTTTATCAGTaGAATTCTGCTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPPGFYQ*NSAPHC
Trigger: GCAGTGAGGAGCAGAATTTCACTGATAAAAACCTGG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAAGGCCCAATTACTGTaGTATTATATGGAGGATAGA +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLKAQLL*YYMEDR
Trigger: TCTATCCTCCATATAATATCACAGTAATTGGGCCTT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTCGGCCTGGATTGTCTaGTTTCCCCAAGCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSAWIV*FPQAFP
Trigger: GGGAAAAGCTTGGGGAAATCAGACAATCCAGGCCGA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACAGGTATGCCCAGCTaGATTCCAAGTGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTGMPS*IPSVDF
Trigger: AAAATCTACACTTGGAATTCAGCTGGGCATACCTGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTGTCCAGGCAGATTTTaGCACACTAGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQCPGRF*HTSCAT
Trigger: GGTTGCACAGCTAGTGTGTCAAAATCTGCCTGGACA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAGACTTTCTTGTCTTaGATGTCCATGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKTFLS*MSMSWL
Trigger: CAGCCAGCTCATGGACATTCAAGACAAGAAAGTCTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGCGTTCCTTAGTCACTaGGCTGAAATCCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVAFLSH*AEILDG
Trigger: GCCATCAAGGATTTCAGCTCAGTGACTAAGGAACGC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGCATTTATGATGTGTaGGTGATAACCCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSIYDV*VITQEE
Trigger: TTCCTCCTGGGTTATCACTCACACATCATAAATGCT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCAGGTAAAGTATTCTaGAGAGCAAACACTTGGTTA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLPGKVF*RANTWL
Trigger: TAACCAAGTGTTTGCTCTGCAGAATACTTTACCTGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTATGGGCGTTAGGATaGAGATCATTCTTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLWALG*RSFLSG
Trigger: ACCAGACAAGAATGATCTGCATCCTAACGCCCATAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAACTTTTATTGGAGGTTaGAAACCATTTACTGTGCGA +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRATFIGG*KPFTVR
Trigger: TCGCACAGTAAATGGTTTGCAACCTCCAATAAAAGT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACTTTTATTGGAGGTTaGAAACCATTTACTGTGCGA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTFIGG*KPFTVR
Trigger: TCGCACAGTAAATGGTTTGCAACCTCCAATAAAAGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTATTCTTCCGACAAACTaGTCTAAACCATTTAAACTC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSILPTN*SKPFKL
Trigger: GAGTTTAAATGGTTTAGAGCAGTTTGTCGGAAGAAT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTATAATCGAAAATCTTaGATTCTTCCGACAAACTGC +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSYNRKS*ILPTNC
Trigger: GCAGTTTGTCGGAAGAATGCAAGATTTTCGATTATA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCACTTCCTGTAGTGTTATaGTCACAATCATCACAAACT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRALPVVL*SQSSQT
Trigger: AGTTTGTGATGATTGTGAGCATAACACTACAGGAAG...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTATGGCCGAAGGATCTaGACCAACTTGTCGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTYGRRI*TNLSEK
Trigger: TTTTTCCGACAAGTTGGTGCAGATCCTTCGGCCATA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCACAGTCACAGGGTTTaGAAACATCTATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLHSHRV*KHLWPK
Trigger: CTTCGGCCATAGATGTTTGCAAACCCTGTGACTGTG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCACAGTCACAGGGTTTaGAAACATCTATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDHSHRV*KHLWPK
Trigger: CTTCGGCCATAGATGTTTGCAAACCCTGTGACTGTG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGCCCAGAGTGAGGATTaGAGAATTTGTTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLAQSED*RICSLS
Trigger: GCTCAGTGAACAAATTCTGCAATCCTCACTCTGGGC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTCTTCAACATTGGGCTTaGAGATGCACTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTILQHWA*RCTALS
Trigger: AGACAGGGCAGTGCATCTGCAAGCCCAATGTTGAAG...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGACATCCAAGTGGCTTaGACTGGGAACACAAGCATC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVDIQVA*TGNTSI
Trigger: GATGCTTGTGTTCCCAGTGCAAGCCACTTGGATGTC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAGTAGAACTGATTTTCTaGATCTTAGGTGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAVELIF*ILGGLS
Trigger: ACTAAGTCCACCTAAGATGCAGAAAATCAGTTCTAC...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGTCTCCGGACTCCGATaGATGCTTCATCAGTCCATT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQVSGLR*MLHQSI
Trigger: AATGGACTGATGAAGCATGCATCGGAGTCCGGAGAC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTGTATCCATTTAAGCTaGGGACTCTTGAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTCIHLS*GLLREL
Trigger: CAACTCCCTCAAGAGTCCGCAGCTTAAATGGATACA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTGTAGTTCTCCTCACTaGCTGAATAGATCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDCSSPH*LNRSAS
Trigger: GGAGGCTGATCTATTCAGGCAGTGAGGAGAACTACA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGGCTTGGATGGTGGTTaGCAAGAAATCACAACATAT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLGLDGG*QEITTY
Trigger: ATATGTTGTGATTTCTTGGCAACCACCATCCAAGCC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTTTGATGCAAGTGGCTaGTGGATTTTACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLFDASG*WILRLR
Trigger: TCTGAGACGTAAAATCCAGCAGCCACTTGCATCAAA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCACAGAAACCCGATTGTaGTGTTCATCTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTTETRL*CSSGQH
Trigger: ATGCTGTCCAGATGAACAGCACAATCGGGTTTCTGT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAATTCTGCTCCTCACTaGCACCCAGGAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDNSAPH*HPGKAS
Trigger: ACTTGCTTTTCCTGGGTGGCAGTGAGGAGCAGAATT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGACTTGTAAGTGTATCTaGTATTGGGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLTCKCI*YWAPGF
Trigger: AAAACCTGGAGCCCAATAGCAGATACACTTACAAGT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCAGACTCCTCTTCAATaGCAGCAGGGCGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVQTPLQ*QQGVCK
Trigger: TTTACAGACGCCCTGCTGGCATTGAAGAGGAGTCTG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCAAGAGCTACAGGTATaGCCAGCTGAATTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDQELQV*PAEFQV
Trigger: CACTTGGAATTCAGCTGGGCATACCTGTAGCTCTTG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGATGTGGAGGGGGTTaGATCAAAGGTGCAATCTCA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRCGGG*IKGAIS
Trigger: TGAGATTGCACCTTTGATGCAACCCCCTCCACATCT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCACTGATGTTGACCACTaGTTGGGTAGAAGAGATCAC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTTDVDH*LGRRDH
Trigger: GTGATCTCTTCTACCCAAGCAGTGGTCAACATCAGT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAGTCACTGCCAGATGTaGACAATTATTTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLSHCQM*TIISDA
Trigger: AGCATCTGAAATAATTGTGCACATCTGGCAGTGACT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTATTTTCTACAGTCACTaGCAGATGTGCACAATTATT +
Preference number: 4 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSIFYSH*QMCTII
Trigger: AATAATTGTGCACATCTGGCAGTGACTGTAGAAAAT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAGGACTTCCAAAATATTaGGGTACTAGTAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQGLPKY*GTSKAR
Trigger: CCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCC...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCCTCAGTGTGACAAATaGCTCTTCAACAGGACCGCT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVPQCDK*LFNRTA
Trigger: AGCGGTCCTGTTGAAGAGCCATTTGTCACACTGAGG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGACATGAGTAGCTGCTaGTATCATTTCTTTATTGCA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPDMSSC*YHFFIA
Trigger: TGCAATAAAGAAATGATACCAGCAGCTACTCATGTC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCGATACTCCATTTTCTaGAAACTGCAGACACGTTCT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRYSIF*KLQTRS
Trigger: AGAACGTGTCTGCAGTTTCCAGAAAATGGAGTATCG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAACAGATCATTCTTGTCTaGTGTGATGCAGCTACTGAG +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQQIILV*CDAATE
Trigger: CTCAGTAGCTGCATCACACCAGACAAGAATGATCTG...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGTTTGCAAACATCTATaGCCGAAGGATCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTVCKHL*PKDLHQ
Trigger: TTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAAC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGTCTCCCTTCAACATTaGGCTTGCAGATGCACTGCC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSVSLQH*ACRCTA
Trigger: GGCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGAC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGCCAGTGGCATTGCCTaGAGAAATATAAAAACCTGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTASGIA*RNIKTW
Trigger: CCAGGTTTTTATATTTCTCCAGGCAATGCCACTGGC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTATGGCAGGCAGCCAGTaGCATTGCCTGGAGAAATAT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIMAGSQ*HCLEKY
Trigger: ATATTTCTCCAGGCAATGCCACTGGCTGCCTGCCAT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTCCAAGTGGCTTGCACTaGGAACACAAGCATCACACT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIPSGLH*EHKHHT
Trigger: AGTGTGATGCTTGTGTTCCCAGTGCAAGCCACTTGG...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTTGAACCATGCACATTaGTGGTCTCAATGTAATAGG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLLNHAH*WSQCNR
Trigger: CCTATTACATTGAGACCACCAATGTGCATGGTTCAA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTTGAACCATGCACATTaGTGGTCTCAATGTAATAGG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLILNHAH*WSQCNR
Trigger: CCTATTACATTGAGACCACCAATGTGCATGGTTCAA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTCTGCTCCCGAAGCACTaGTCACACAACCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTILLPKH*SHNQLN
Trigger: ATTCAGTTGGTTGTGTGACCAGTGCTTCGGGAGCAG...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAACTGGGTGAGTGGAGCTaGGAAATTTACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQLGEWS*EIYNTH
Trigger: ATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAG...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGAAGTCTGTATTGACTaGGTGAGTGGAGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLEVCID*VSGAGK
Trigger: TTTCCCAGCTCCACTCACCCAGTCAATACAGACTTC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGGCTGAACCTCTTGTaGGGCTTCTTGTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVWLNLL*GFLWSR
Trigger: TCTACTCCACAAGAAGCCCCACAAGAGGTTCAGCCA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGAATCCACGTGTTCTaGTGGCAGCTGTGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGIHVF*WQLCCV
Trigger: TACACAGCACAGCTGCCACCAGAACACGTGGATTCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTGGCCGTGCATGCTTaGACTCTGAAGGAATGTAAA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLAVHA*TLKECK
Trigger: TTTACATTCCTTCAGAGTCCAAGCATGCACGGCCAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCGATTTTCCACCAGTaGGCCCAGAGCACAACCTTT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSIFHQ*AQSTTF
Trigger: AAAGGTTGTGCTCTGGGCCCACTGGTGGAAAATCGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTAGTTATTACCTACTaGGTCTACATAGAATATCCC +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLVVITY*VYIEYP
Trigger: GGGATATTCTATGTAGACCCAGTAGGTAATAACTAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAACTCTAGAAATCCATaGGTGGAGTCGCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVNSRNP*VESPDL
Trigger: GAGGTCTGGCGACTCCACCCATGGATTTCTAGAGTT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGTGTCCATACAGTCTaGGACTCTGGTGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSVHTV*DSGERE
Trigger: TTCCCTTTCACCAGAGTCCCAGACTGTATGGACACT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCATCAGAGAACAGCTCTaGACTTGGGATCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSIREQL*TWDPFR
Trigger: CCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGAT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCACGTCGATGGCTGTGTaGTTAAGGACACTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSTSMAV*LRTLAV
Trigger: CACTGCGAGTGTCCTTAACCACACAGCCATCGACGT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCATTACAGCATTTCTaGCTCTTTGGAATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPLQHF*LFGISS
Trigger: TGAACTTATTCCAAAGAGCCAGAAATGCTGTAATGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTGATGCCTTCCCTGTaGAATTGTGAGACCCTCTTA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLMPSL*NCETLL
Trigger: TAAGAGGGTCTCACAATTCCACAGGGAAGGCATCAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCCAACCTGCCTGATCTaGTACTCTTTAATGACGCCG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVPTCLI*YSLMTP
Trigger: CGGCGTCATTAAAGAGTACCAGATCAGGCAGGTTGG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAATTTTCCAGAAGGGTaGATTGATGATGACCAACGG +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLNFPEG*IDDDQR
Trigger: CCGTTGGTCATCATCAATCCACCCTTCTGGAAAATT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTTGAGCCCAAGGAGCTaGAAAATCTTGAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLSPRS*KILRWS
Trigger: GCTCCACCTCAAGATTTTCCAGCTCCTTGGGCTCAA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGCCATTGGGAGATTCTaGCTTTGTCCAATTCAACAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTAIGRF*LCPIQQ
Trigger: CTGTTGAATTGGACAAAGCCAGAATCTCCCAATGGC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGTGCATAGCTATAGGTaGAAAAAGGAAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLVHSYR*KKEEAL
Trigger: AAGAGCTTCTTCCTTTTTCCACCTATAGCTATGCAC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTCCATTTTGCACTGTaGGCGGTGACCAACATACAT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTFHFAL*AVTNIH
Trigger: ATGTATGTTGGTCACCGCCCACAGTGCAAAATGGAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGAGTCCATGTTCTCTaGCAGGGCCTCCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSRVHVL*QGLHCP
Trigger: TGGACAATGGAGGCCCTGCCAGAGAACATGGACTCT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTGTGACTTGCAATGTTaGAGAGTCCATGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPCDLQC*RVHVLW
Trigger: CCAGAGAACATGGACTCTCCAACATTGCAAGTCACA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATTCATACCTGTGAAATaGCTTCAGCTGGTTTACTAT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLFIPVK*LQLVYY
Trigger: ATAGTAAACCAGCTGAAGCCATTTCACAGGTATGAA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTTGTACCTCCAGATGTaGAGGGGGTTGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQLYLQM*RGLHQR
Trigger: CCTTTGATGCAACCCCCTCCACATCTGGAGGTACAA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTGGCTGGAATCCTCCTaGAGCCATTTGTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSWLESS*SHLYLQ
Trigger: CTGGAGGTACAAATGGCTCCAGGAGGATTCCAGCCA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTTGTTTCTATTTGGCTaGGAGTACAGGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQLFLFG*EYRGGL
Trigger: CAGCCCTCCCCTGTACTCCCAGCCAAATAGAAACAA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTACTTTGTTTCTATTTaGCTGGGAGTACAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTYFVSI*LGVQGR
Trigger: CCTCCCCTGTACTCCCAGCCAAATAGAAACAAAGTA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGTCGTGCAGATGACCTaGAAAAAGAAGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPVVQMT*KKKVLS
Trigger: GGACAAAACCTTCTTTTTCCAGGTCATCTGCACGAC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTATGGTTTTCCCCCGGTaGGTAAACATTCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPMVFPR*VNIQWR
Trigger: TCTCCATTGAATGTTTACCCACCGGGGGAAAACCAT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAAAAGTTTGTCGACCTaGTGCAAAGTTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLKSLST*CKVWDS
Trigger: TGAATCCCAAACTTTGCACCAGGTCGACAAACTTTT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTTTACTGTTGGGCCCTaGGGTAATACATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLFTVGP*GNTLFS
Trigger: TGAAAACAATGTATTACCCCAGGGCCCAACAGTAAA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTGTATAATAGAGGCTTaGCACGCAATACCACTTAAA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPCIIEA*HAIPLK
Trigger: TTTAAGTGGTATTGCGTGCCAAGCCTCTATTATACA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATTGTGGAACATCAGTaGGTCTCAACATTAGAACAC +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLIVEHQ*VSTLEH
Trigger: GTGTTCTAATGTTGAGACCCACTGATGTTCCACAAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCGTAAGCTGAGAATGTaGCATGTACAATTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPRKLRM*HVQLVK
Trigger: TTTTACCAATTGTACATGCCACATTCTCAGCTTACG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGAAGCCAGAGCCCAATaGAAGAACTGGGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQEARAQ*KNWAIH
Trigger: ATGAATTGCCCAGTTCTTTCATTGGGCTCTGGCTTC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACCTGCACACTAAGATaGATCCATTTCTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTCTLR*IHFFTR
Trigger: TCTTGTGAAGAAATGGATTCATCTTAGTGTGCAGGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTCAGGATTCAACCGTaGCACTCTATTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPFRIQP*HSIISC
Trigger: ACAGCTGATAATAGAGTGTCACGGTTGAATCCTGAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGCAGAATTTGTTCACTaGGCCATGGAGGTTACACTG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQAEFVH*AMEVTL
Trigger: CAGTGTAACCTCCATGGCTCAGTGAACAAATTCTGC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAAGGACATTGTCCTGTTaGTTTGTTACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQRTLSC*FVTQQR
Trigger: TCTCTGCTGTGTAACAAATCAACAGGACAATGTCCT...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCACATCTGGCAGTGTTaGAAATTGTCAATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLHIWQC*KLSMVK
Trigger: TTTGACCATTGACAATTTTCAACACTGCCAGATGTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTTACACCTTCTTCCTTaGCGATTAGGCACACACAGG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLHLLP*RLGTHR
Trigger: CCTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGAAACACTGGCCTGTaGCCAAGTGACAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRNTGL*PSDRFH
Trigger: ATGAAACCTGTCACTTGGTCACAGGCCAGTGTTTCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCAACCCAATAGATTGTTaGCATCCAAGTGGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLNPIDC*HPSGLH
Trigger: GTGCAAGCCACTTGGATGTCAACAATCTATTGGGTT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATAGCAGAAGAACTTTaGACTTGTCCTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVIAEEL*TCPLGG
Trigger: TCCGCCCAGAGGACAAGTTCAAAGTTCTTCTGCTAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGCTACACTCCTTGTTaGACCATGCACATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSYTPC*TMHIGG
Trigger: ACCACCAATGTGCATGGTTCAACAAGGAGTGTAGCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCATTCCAGATGGTAGCTaGGGTTTCATGACCTTCGTA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLIPDGS*GFMTFV
Trigger: TACGAAGGTCATGAAACCTCAGCTACCATCTGGAAT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGCCAACCACTGCTCTaGAAAACTCGACTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSQPLL*KTRLSS
Trigger: TGAGGAAAGTCGAGTTTTTCAGAGCAGTGGTTGGCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCACAGCTAAGACTCTaGACTCATACTTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSQLRL*THTWCM
Trigger: CATACACCAAGTATGAGTTCAGAGTCTTAGCTGTGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCATGGGAATAGACTGTTaGGGTGATTGTTCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTMGIDC*GDCSES
Trigger: GCTTTCTGAACAATCACCTCAACAGTCTATTCCCAT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCTCTCCTTTCCAGCTaGTATATAGGAGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSLLSS*YIGEGP
Trigger: TGGACCCTCTCCTATATATCAGCTGGAAAGGAGAGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAGCTGTTATACACGTTaGTTTGTTCTTCAGAACTCT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLSCYTR*FVLQNS
Trigger: AGAGTTCTGAAGAACAAATCAACGTGTATAACAGCT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCCATTCACACTTGCTaGTATGAAAGAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSIHTC*YERAFL
Trigger: AAGGAAGGCTCTTTCATATCAGCAAGTGTGAATGGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTCCCACATAAACTGGTaGATTCACCACCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSHINW*IHHQWL
Trigger: CAGCCACTGGTGGTGAATTCACCAGTTTATGTGGGA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGACGTATTGTAGCATATaGTCCTGGAAAAGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLTYCSI*SWKSSV
Trigger: TACAGAACTTTTCCAGGATCATATGCTACAATACGT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCTGCCTTGGCTATTTaGAATATTCACTTGTACAGT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLAALAI*NIHLYS
Trigger: ACTGTACAAGTGAATATTTCAAATAGCCAAGGCAGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGCTTTAGGTGGCCAATaGCATGAGAGTTTACATCTG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDALGGQ*HESLHL
Trigger: CAGATGTAAACTCTCATGTCATTGGCCACCTAAAGC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTTCCCTGTGGAATTGTaGGACCCTCTTATCACAGTG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVFPVEL*DPLITV
Trigger: CACTGTGATAAGAGGGTCTCACAATTCCACAGGGAA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTTACACTCCCTGTATaGATGGTTTCTTCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTFTLPV*MVSSAD
Trigger: ATCTGCCGAAGAAACCATTCATACAGGGAGTGTAAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGGGGACTCACTCCTTaGGGCACATCTTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGGLTP*GTSSFV
Trigger: AACAAAAGAAGATGTGCCTCAAGGAGTGAGTCCCCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCCACAACTTCCATTTTaGCATGCTTGTATCCTTATC +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLPQLPF*HACILI
Trigger: GATAAGGATACAAGCATGTCAAAATGGAAGTTGTGG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCCAATTCAACAGAACTaGATGAGCACTCGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQPIQQN*MSTRGL
Trigger: CAAGCCACGAGTGCTCATTCAGTTCTGTTGAATTGG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCAATGCGATATGTTGTaGATGGTTCTAACCCGTACA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPQCDML*MVLTRT
Trigger: TGTACGGGTTAGAACCATTCACAACATATCGCATTG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCAACATACATTCATTTaGGTGGCACTGACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVQHTFI*VALTAQ
Trigger: TTGGGCCGTCAGTGCCACTCAAATGAATGTATGTTG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGGCTGGTTCGATCTTTaGCAAGAGGACTCAAAATAC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDGWFDL*QEDSKY
Trigger: GTATTTTGAGTCCTCTTGTCAAAGATCGAACCAGCC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGGGTGGTGCACGCTTaGATTCGTATTTCATACCTG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQRVVHA*IRISYL
Trigger: CAGGTATGAAATACGAATTCAAGCGTGCACCACCCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCTCAGGGGTCTGTATaGATGTCCAGTCACTTGATG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSQGSV*MSSHLM
Trigger: CATCAAGTGACTGGACATTCATACAGACCCCTGAGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCAAACAGAACCAAGTaGCAATTACATACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLPNRTK*QLHTSL
Trigger: CAAAGAAGTATGTAATTGTCACTTGGTTCTGTTTGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTATGGGCGTTAGGATaGAGATCATTCTTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLWALG*RSFLSG
Trigger: ACCAGACAAGAATGATCTGCATCCTAACGCCCATAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCCAAAAATAAAACTTaGAGAATTGCTATGGGCGTT +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSKNKT*RIAMGV
Trigger: AACGCCCATAGCAATTCTGCAAGTTTTATTTTTGGA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGCAAACCATTTACTGTaGGATAATAAAACATGGTCT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLANHLL*DNKTWS
Trigger: AGACCATGTTTTATTATCGCACAGTAAATGGTTTGC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTAAACTCTGTCCTATTTaGACAGTACCAGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIKLCPI*TVPDAK
Trigger: TTTTGCATCTGGTACTGTGCAAATAGGACAGAGTTT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATTCTTCCGACAAACTaGTCTAAACCATTTAAACTC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPILPTN*SKPFKL
Trigger: GAGTTTAAATGGTTTAGAGCAGTTTGTCGGAAGAAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATATAATCGAAAATCTTaGATTCTTCCGACAAACTGC +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAYNRKS*ILPTNC
Trigger: GCAGTTTGTCGGAAGAATGCAAGATTTTCGATTATA...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTATGGCCGAAGGATCTaGACCAACTTGTCGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDYGRRI*TNLSEK
Trigger: TTTTTCCGACAAGTTGGTGCAGATCCTTCGGCCATA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCGTTTGCTTTGCACTTaGACTGGCCTGAATTTTGGT +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLRLLCT*TGLNFG
Trigger: ACCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGCTTGCAGATGCACTaGCCTGTCTTAGCATTACAG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGLQMH*PVLALQ
Trigger: CTGTAATGCTAAGACAGGGCAGTGCATCTGCAAGCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGACATCCAAGTGGCTTaGACTGGGAACACAAGCATC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSDIQVA*TGNTSI
Trigger: GATGCTTGTGTTCCCAGTGCAAGCCACTTGGATGTC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTGGGATTTAGCAGTGTaGAACAGCTGTGAAAACGCC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQWDLAV*NSCENA
Trigger: GGCGTTTTCACAGCTGTTGCACACTGCTAAATCCCA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAATACTCTTCCTGATTaGCAGGTGATGCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPNTLPD*QVMLQR
Trigger: TCTTTGCAGCATCACCTGGCAATCAGGAAGAGTATT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTACAGCCCACATGTGTaGATGCACTTAGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPYSPHV*MHLVET
Trigger: AGTTTCTACTAAGTGCATGCACACATGTGGGCTGTA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGGGTGGGTAGGGGGTTaGCAAGATATAATCACAGAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQGWVGG*QDIITD
Trigger: ATCTGTGATTATATCTTGGCAACCCCCTACCCACCC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAAGCACTGCTGTTTGTaGCTCCATGAAGAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQKHCCL*LHEECS
Trigger: TGAGCACTCTTCATGGAGGCACAAACAGCAGTGCTT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTTGATGCAAGTGGCTaGTGGATTTTACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPFDASG*WILRLR
Trigger: TCTGAGACGTAAAATCCAGCAGCCACTTGCATCAAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTTTTTGACACCTCACTaGCTTGCAGAGCTCATCACT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDFLTPH*LAELIT
Trigger: AGTGATGAGCTCTGCAAGGCAGTGAGGTGTCAAAAA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCCTTGGGTAGTAGCTaGAACTACCTTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSLGSS*NYLATG
Trigger: ACCAGTAGCAAGGTAGTTGCAGCTACTACCCAAGGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTCTCCTGCATGGTTTaGAGCCACAACACCAATGCG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFSCMV*SHNTNA
Trigger: CGCATTGGTGTTGTGGCTGCAAACCATGCAGGAGAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCGTGCAGGCTTGGAGTaGATAGCTATAGGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQRAGLE*IAIGGK
Trigger: TTTTCCACCTATAGCTATGCACTCCAAGCCTGCACG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATACTGATGTTGACCACTaGTTGGGTAGAAGAGATCAC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDTDVDH*LGRRDH
Trigger: GTGATCTCTTCTACCCAAGCAGTGGTCAACATCAGT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGAACTCTGTGCTTTTaGTCCGCGATCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRTLCF*SAIPSF
Trigger: AAAAGAAGGGATCGCGGAGCAAAAGCACAGAGTTCT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATTTTCTACAGTCACTaGCAGATGTGCACAATTATT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLIFYSH*QMCTII
Trigger: AATAATTGTGCACATCTGGCAGTGACTGTAGAAAAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGATTCATTACCAAGGTaGATCAGCAGCCAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLDSLPR*ISSQSQ
Trigger: TTGAGACTGGCTGCTGATGCACCTTGGTAATGAATC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAACATACTGCTTGGGTTaGCACGATGGAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQTYCLG*HDGNFL
Trigger: AAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGT...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAGTCCACATACTGCTTaGGTTGGCACGATGGAAACT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTISPHTA*VGTMET
Trigger: AGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAAAAGTGCTTCGGTCTaGGAGTCCACATACTGCTTG +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIKSASV*ESTYCL
Trigger: CAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAAAAGTGCTTCGGTCTaGGAGTCCACATACTGCTTG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVKSASV*ESTYCL
Trigger: CAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTTTGTAAGTGCCACTTaGTATAATCGAAAATCTTGC +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPFVSAT*YNRKSC
Trigger: GCAAGATTTTCGATTATACCAAGTGGCACTTACAAA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATATTTCCGTTGGTTGTaGACTAAAGAACTGAATGAT +
Preference number: 4 (lower is better)
Translates to: FGVSVTGCILRISNSMRAYFRWL*TKELND
Trigger: ATCATTCAGTTCTTTAGTCCACAACCAACGGAAATA...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTAATCCTTATTTCCGTTaGTTGTGGACTAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLINPYFR*LWTKEL
Trigger: CAGTTCTTTAGTCCACAACCAACGGAAATAAGGATT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAGCACCACAATTCCTaGCAAAATATTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKHHNS*QNIASP
Trigger: AGGACTGGCAATATTTTGCCAGGAATTGTGGTGCTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCCAGGACGATAATTTaGTCCAGGTGTCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSRTII*SRCQDA
Trigger: AGCATCCTGACACCTGGACCAAATTATCGTCCTGGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGCCAGTGGCATTGCCTaGAGAAATATAAAAACCTGG +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDASGIA*RNIKTW
Trigger: CCAGGTTTTTATATTTCTCCAGGCAATGCCACTGGC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGTATTGAATACTGTATaGGTATTGATCCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TLEHLEALKSTDASATHPVLNTV*VLILCC
Trigger: ACAACAGAGGATCAATACCCATACAGTATTCAATAC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCTCATACTTGGTGTATaGCTCCAAGCCAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQLILGV*LQASDG
Trigger: ACCATCACTGGCTTGGAGCCATACACCAAGTATGAG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTGTAACATTATCTGCTaGCTTCTCCCAGGAGATATT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLCNIIC*LLPGDI
Trigger: AATATCTCCTGGGAGAAGCCAGCAGATAATGTTACA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCTGCTCCCGAAGCACTaGTCACACAACCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSLLPKH*SHNQLN
Trigger: ATTCAGTTGGTTGTGTGACCAGTGCTTCGGGAGCAG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGTTCAGCAGTTCCTGTaGGATTCCTCCCACATAAAC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQVQQFL*DSSHIN
Trigger: GTTTATGTGGGAGGAATCCCACAGGAACTGCTGAAC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTGGCTGAACCTCTTGTaGGGCTTCTTGTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSWLNLL*GFLWSR
Trigger: TCTACTCCACAAGAAGCCCCACAAGAGGTTCAGCCA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGCCATCTGGAGCTCCTaGAGGCATTGCAATTGTTAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVAIWSS*RHCNCY
Trigger: ATAACAATTGCAATGCCTCCAGGAGCTCCAGATGGC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGCGTTATTACGAGCTaGTGTAGACCAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSVITS*CRPDNL
Trigger: CAGGTTGTCTGGTCTACACCAGCTCGTAATAACGCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTCTGCGGTCATGAATaGAATCCAAGAACTATGTGC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLCGHE*NPRTMC
Trigger: GCACATAGTTCTTGGATTCCATTCATGACCGCAGAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGCAGCACTGATGATTTaGTTGTGCCTCCTGTATTCG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVAALMI*LCLLYS
Trigger: CGAATACAGGAGGCACAACCAAATCATCAGTGCTGC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGATCACAGTGCAAATGTaGCTGGTAAAGTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLITVQM*LVKLKS
Trigger: TGACTTCAACTTTACCAGCCACATTTGCACTGTGAT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCACTCCCTGTATGAATaGTTTCTTCGGCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDHSLYE*FLRQMN
Trigger: GTTCATCTGCCGAAGAAACCATTCATACAGGGAGTG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATTTGGTTTTTCAGGTaGCATCCACTTAATCTCTAT +
Preference number: 4 (lower is better)
Translates to: KSTDASATHPRSTESESLIWFFR*HPLNLY
Trigger: ATAGAGATTAAGTGGATGCCACCTGAAAAACCAAAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGATGATGATTCCATTTaGTTTTTCAGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLDDDSI*FFRWHP
Trigger: TGGATGCCACCTGAAAAACCAAATGGAATCATCATC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAATTATTTTTCCATTTaGGTTAACAGGCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQNYFSI*VNRLRP
Trigger: TGGTCTGAGCCTGTTAACCCAAATGGAAAAATAATT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATAGGATATCACAGGTaGAGAGAGACCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQIGYHR*RETFWR
Trigger: CCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGTAGCTCACAGAAGGTaGACACAGCCTTGGTTAATG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVVAHRR*TQPWLM
Trigger: CATTAACCAAGGCTGTGTCCACCTTCTGTGAGCTAC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAGATCAACATTTCAATaGCCTGAAACAAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTRSTFQ*PETRSQ
Trigger: CTGGCTTCTTGTTTCAGGTCATTGAAATGTTGATCT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCTCAGTCAAGGATATTaGAGCAAAATAGGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLLSQGY*SKIGKD
Trigger: ATCTTTGCCTATTTTGCTTCAATATCCTTGACTGAG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAAGCTGAAGACAGTTaGCAGAATCAGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKAEDS*QNQVFP
Trigger: TGGAAAAACCTGATTCTGTCAACTGTCTTCAGCTTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCACTGTCCTCCAATCTaGTCACAAAGAATGCTACCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQHCPPI*SQRMLP
Trigger: TGGTAGCATTCTTTGTGATCAGATTGGAGGACAGTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTTGGCCTGAATTTTGGTaGCAGGTAATATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIWPEFW*QVISPS
Trigger: GGATGGAGATATTACCTGTCACCAAAATTCAGGCCA...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGCACTTGCACTGGCCTaGATTTTGGTGACAGGTAAT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSALALA*ILVTGN
Trigger: ATTACCTGTCACCAAAATTCAGGCCAGTGCAAGTGC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGCAGAATTTGTTCACTaGGCCATGGAGGTTACACTG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSAEFVH*AMEVTL
Trigger: CAGTGTAACCTCCATGGCTCAGTGAACAAATTCTGC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAAGGCCTTACAATTGGTaGCATCTAACCCATAAAAGT +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQRPYNW*HLTHKS
Trigger: ACTTTTATGGGTTAGATGTCACCAATTGTAAGGCCT...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGGACATTGTCCTGTTaGTTTGTTACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRTLSC*FVTQQR
Trigger: TCTCTGCTGTGTAACAAATCAACAGGACAATGTCCT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCTTCATTCAAGGCTCCTaGGAGATGACAATTACAAGG +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLFIQGS*EMTITR
Trigger: CCTTGTAATTGTCATCTCTCAGGAGCCTTGAATGAA...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGGACCAGATTGATTTaGGAGTGTTGTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGTRLI*ECCPGK
Trigger: CTTACCTGGACAACACTCTCAAATCAATCTGGTCCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATTCCAGATGGTAGCTaGGGTTTCATGACCTTCGTA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQIPDGS*GFMTFV
Trigger: TACGAAGGTCATGAAACCTCAGCTACCATCTGGAAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAGTTCAGAAAGCATATTaGTGTCATACCCCACAACTT +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQVQKAY*CHTPQL
Trigger: AAGTTGTGGGGTATGACATCAATATGCTTTCTGAAC...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATATGGGAATAGACTGTTaGGGTGATTGTTCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDMGIDC*GDCSES
Trigger: GCTTTCTGAACAATCACCTCAACAGTCTATTCCCAT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCATGGGAATAGACTGTTaGGGTGATTGTTCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLMGIDC*GDCSES
Trigger: GCTTTCTGAACAATCACCTCAACAGTCTATTCCCAT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGTGTGCAACAGCTGTaGAAACGCCATGGGAATAGA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSVQQL*KRHGNR
Trigger: TCTATTCCCATGGCGTTTTCACAGCTGTTGCACACT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCGTCCCTTCTTCAACTaGAGTGCAAAATACTCTTCC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQRPFFN*SAKYSS
Trigger: GGAAGAGTATTTTGCACTTCAGTTGAAGAAGGGACG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGTTACTTCCACTGGTaGCCCCTGAGGATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSYFHW*PLRIKK
Trigger: CTTTTTGATCCTCAGGGGTCACCAGTGGAAGTAACT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATATCCCATCCAGAGTaGTTTGGCCAAAAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQISHPE*FGQKPD
Trigger: ATCAGGCTTTTGGCCAAATCACTCTGGATGGGATAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGCATGCTTGGACTCTaGAGGAATGTAAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVCMLGL*RNVNSK
Trigger: CTTGGAGTTTACATTCCTTCAGAGTCCAAGCATGCA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTGTCCTCTGCGGTCATaGATGGAATCCAAGAACTAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQCPLRS*MESKNY
Trigger: ATAGTTCTTGGATTCCATTCATGACCGCAGAGGACA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTCACCTTGTAGGTCTTaGACAGTTGGTTTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSPCRS*TVGLAH
Trigger: GTGGGCTAAACCAACTGTTCAAGACCTACAAGGTGA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAACACCATTTGGGTTTaGAGGAGATGTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQNTIWV*RRCPDD
Trigger: GTCATCTGGACATCTCCTTCAAACCCAAATGGTGTT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGAAGAGATCTTGAAGTaGTGCCACGAATTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSEEILK*CHELWV
Trigger: CACCCACAATTCGTGGCATCACTTCAAGATCTCTTC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGACACCCAATCAATTTaGAGAGATCTTGAAGTGATG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPDTQSI*RDLEVM
Trigger: CATCACTTCAAGATCTCTTCAAATTGATTGGGTGTC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGATCATATCCAAGAATaGTGCCATTTGGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVDHIQE*CHLASV
Trigger: CACGGAAGCCAAATGGCATCATTCTTGGATATGATC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATAGATTCAGGTTTTTaGCACCTCACTGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQIDSGF*HLTALQ
Trigger: CTGCAAGGCAGTGAGGTGTCAAAAACCTGAATCTAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGCAGCATATGGTATCTaGCATATTCACATAATCCTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTAAYGI*HIHIIL
Trigger: CAGGATTATGTGAATATGTCAGATACCATATGCTGC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATGTCATGTAGGGCTTaGGGTTCACATCTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVMSCRA*GSHLCK
Trigger: CTTACACAGATGTGAACCTCAAGCCCTACATGACAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCATCAGAGAAGCTCAGTaGTGTTCCCCGAAAACGTTC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSIREAQ*CSPKTF
Trigger: GAACGTTTTCGGGGAACATCACTGAGCTTCTCTGAT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTTTAATGACGCCGTTTaGTTTCTCAGGGACACTCCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQFNDAV*FLRDTP
Trigger: TGGAGTGTCCCTGAGAAATCAAACGGCGTCATTAAA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCAATGCGATATGTTGTaGATGGTTCTAACCCGTACA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDQCDML*MVLTRT
Trigger: TGTACGGGTTAGAACCATTCACAACATATCGCATTG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTGGATTTTCTAGGCTaGGTTGCTATTTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLDFLG*VAICLL
Trigger: CAGAAGACAAATAGCAACTCAGCCTAGAAAATCCAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAGAAATGAACAGCAGTaGCATCCTTTCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTRNEQQ*HPFNRI
Trigger: GATTCTGTTGAAAGGATGTCACTGCTGTTCATTTCT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGAATCTCCAATAGCATaGGGGCATTTTGCAAACTCA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLESPIA*GHFANS
Trigger: TGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTTATGGCCGAAGGATCTaGACCAACTTGTCGGAAAAA +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIYGRRI*TNLSEK
Trigger: TTTTTCCGACAAGTTGGTGCAGATCCTTCGGCCATA...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGGCAGCCAGTGGCATTaGCTGGAGAAATATAAAAAC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVGSQWH*LEKYKN
Trigger: GTTTTTATATTTCTCCAGGCAATGCCACTGGCTGCC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCAAAGTAATGGTCTTTaGATTGGTCACAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLQSNGL*IGHNVA
Trigger: GGCAACGTTGTGACCAATGCAAAGACCATTACTTTG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGCTGGAATGGAGTTTTaGTGCAACCCAATAGATTGT +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLAGMEF*CNPIDC
Trigger: ACAATCTATTGGGTTGCAGCAAAACTCCATTCCAGC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCTCTTGTAACATTATCTaGTGGCTTCTCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLSCNII*WLLPGD
Trigger: ATCTCCTGGGAGAAGCCAGCAGATAATGTTACAAGA...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGTTCTTCAGAACTCTaGCAATCCAGAGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVCSSEL*QSRGSQ
Trigger: TTGGGAACCTCTGGATTGGCAGAGTTCTGAAGAACA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGATCAGTTATCAAGCTaGCTTGGCTATTTGAAATAT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLDQLSS*LGYLKY
Trigger: ATATTTCAAATAGCCAAGGCAGCTTGATAACTGATC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAAGAACTATGTGCACTaGCAAATCCATTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDKNYVH*QIHWRQ
Trigger: TTGCCTCCAATGGATTTGGCAGTGCACATAGTTCTT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGTGTATGGGTGTAAATaGATCACTGTGCAATTAGTG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPVYGCK*ITVQLV
Trigger: CACTAATTGCACAGTGATGCATTTACACCCATACAC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGCCTCCATGAAGAGTaGTCATCAGTACCCGATATT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVCLHEE*SSVPDI
Trigger: AATATCGGGTACTGATGAGCACTCTTCATGGAGGCA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGCAGGAATCACCAATaGCAACAGAAACCCGATTGT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSRNHQ*QQKPDC
Trigger: ACAATCGGGTTTCTGTTGGCATTGGTGATTCCTGCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGACCTTTCCCAACCTaGCTGATCTGGTACTCTTTA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRPFPT*LIWYSL
Trigger: TAAAGAGTACCAGATCAGGCAGGTTGGGAAAGGTCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCACTGCGTCCATGGTTaGAAACCTGTGTCATTATAC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQHCVHG*KPVSLY
Trigger: GTATAATGACACAGGTTTGCAACCATGGACGCAGTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGATTTTATATTCACACTaGGTCCATGGTTGCAAACCT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLILYSH*VHGCKP
Trigger: AGGTTTGCAACCATGGACGCAGTGTGAATATAAAAT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCACTTTTCCATTTGGCTaGAGCGGTCCTGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSTFPFG*SGPVHK
Trigger: TTTGTGGACAGGACCGCTGCAGCCAAATGGAAAAGT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAACAAGAGCCTCACTTaGTTTACCATAGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTINKSLT*FTIVLA
Trigger: AGCCAGGACTATGGTAAAGCAAGTGAGGCTCTTGTT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAGTGAGGCAGGATTGTaGTGGTACAGAGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTISEAGL*WYRVQS
Trigger: AGATTGAACTCTGTACCAGCACAATCCTGCCTCACT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGGCATCTATATGGCTaGCTTGTTGTGTCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQRHLYG*LVVSQL
Trigger: TAACTGCGACACAACAAGCCAGCCATATAGATGCCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTGCCAGTGGCATTGCCTaGAGAAATATAAAAACCTGG +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIASGIA*RNIKTW
Trigger: CCAGGTTTTTATATTTCTCCAGGCAATGCCACTGGC...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGTATTGAATACTGTATaGGTATTGATCCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TESESLEASLHGLYNRGLVLNTV*VLILCC
Trigger: ACAACAGAGGATCAATACCCATACAGTATTCAATAC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTGTATTGAATACTGTATaGGTATTGATCCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TGCILRISNSMRAFCKLIVLNTV*VLILCC
Trigger: ACAACAGAGGATCAATACCCATACAGTATTCAATAC...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTGAACCATGCACATTaGTGGTCTCAATGTAATAGG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLNHAH*WSQCNR
Trigger: CCTATTACATTGAGACCACCAATGTGCATGGTTCAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGAAACCACCTAAGATaGATTGTTGTGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGNHLR*IVVLLI
Trigger: AATCAACAGCACAACAATCCATCTTAGGTGGTTTCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTTGGCCGTGCATGCTTaGACTCTGAAGGAATGTAAA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLAVHA*TLKECK
Trigger: TTTACATTCCTTCAGAGTCCAAGCATGCACGGCCAA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGACAACCTGAAGACTaGTTGGAGTGGCAGATGAAA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRQPED*LEWQMK
Trigger: TTTCATCTGCCACTCCAACCAGTCTTCAGGTTGTCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGACAACCTGAAGACTaGTTGGAGTGGCAGATGAAA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQRQPED*LEWQMK
Trigger: TTTCATCTGCCACTCCAACCAGTCTTCAGGTTGTCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCCATTTGGCTTGGATaGTGGTTGCCAAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSIWLG*WLPRNH
Trigger: GTGATTTCTTGGCAACCACCATCCAAGCCAAATGGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGATGCAAGTGGCTGCTaGATTTTACGTCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSDASGC*ILRLRS
Trigger: GCTTCTGAGACGTAAAATCCAGCAGCCACTTGCATC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTCACAGCATTTTACTaGCACCGGGTCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLTAFY*HRVILF
Trigger: AAAAAGAATGACCCGGTGCCAGTAAAATGCTGTGAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGATGAGGATCCCTGGTaGTATCCAAGCTACAAATAT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDDEDPW*YPSYKY
Trigger: ATATTTGTAGCTTGGATACCACCAGGGATCCTCATC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATTAGACTGTTCTGGTaGGATCCAGGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQIRLFW*DPGNQQ
Trigger: CTGCTGATTTCCTGGATCCCACCAGAACAGTCTAAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGACCATTAGACTGTTCTaGTGGGATCCAGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQTIRLF*WDPGNQ
Trigger: CTGATTTCCTGGATCCCACCAGAACAGTCTAATGGT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGTAGAGGTATCATATTaGATCAACGGCGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPVEVSY*INGVLT
Trigger: TGTTAAGACGCCGTTGATCCAATATGATACCTCTAC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGGTGGACACAGCCTTaGTTAATGCTTATTTGTGCC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRWTQP*LMLICA
Trigger: GGCACAAATAAGCATTAACCAAGGCTGTGTCCACCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAAGCTGATTTTTGTCTaGTGCACCTGCACACTAAGA +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIKLIFV*CTCTLR
Trigger: TCTTAGTGTGCAGGTGCATCAGACAAAAATCAGCTT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAAAGCTGAAGACAGTTaGCAGAATCAGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDKAEDS*QNQVFP
Trigger: TGGAAAAACCTGATTCTGTCAACTGTCTTCAGCTTT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAATCCAAAATTGCAATaGTCACACCTAAGCCCAATA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTNPKLQ*SHLSPI
Trigger: TATTGGGCTTAGGTGTGATCATTGCAATTTTGGATT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCAGGCTATTACAGATGTaGTTAACTGCACCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLRLLQM*LTAPVV
Trigger: TACAACTGGTGCAGTTAATCACATCTGTAATAGCCT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATACAAGCATCACACTTTaGGCCAGTGACAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDTSITL*ASDKLF
Trigger: AAACAATTTGTCACTGGCTCAAAGTGTGATGCTTGT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGGAGACCATTCTACATaGAGTTCTGTAGAACTGATT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDGDHST*SSVELI
Trigger: AATCAGTTCTACAGAACTTCATGTAGAATGGTCTCC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGGTCACACAACCAACTaGATTGCAGAGAGTAATAGT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQGHTTN*IAESNS
Trigger: ACTATTACTCTCTGCAATTCAGTTGGTTGTGTGACC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTGGTCACACAACCAACTaGATTGCAGAGAGTAATAGT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIGHTTN*IAESNS
Trigger: ACTATTACTCTCTGCAATTCAGTTGGTTGTGTGACC...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAATACCCATTTCCTATaGAACGGATTCCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTNTHFL*NGFLSS
Trigger: TGATGAAAGGAATCCGTTTCATAGGAAATGGGTATT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTCTGTATTGACTGGGTaGGTGGAGCTGGGAAATTTA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSVLTG*VELGNL
Trigger: TAAATTTCCCAGCTCCACTCACCCAGTCAATACAGA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTCCTGATTGCCAGGTaGTGCTGCAAAGACAATCAA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFLIAR*CCKDNQ
Trigger: TTGATTGTCTTTGCAGCATCACCTGGCAATCAGGAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTATTTGGCCAAAAGCCTaGTGCCTAATAGCAATTATT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPIWPKA*CLIAII
Trigger: AATAATTGCTATTAGGCATCAGGCTTTTGGCCAAAT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATATACTGCTAAATCTGTaGCTATGTAGTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDILLNL*LCSSPH
Trigger: GTGAGGAGAACTACATAGTCACAGATTTAGCAGTAT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTGTCCTCTGCGGTCATaGATGGAATCCAAGAACTAT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSCPLRS*MESKNY
Trigger: ATAGTTCTTGGATTCCATTCATGACCGCAGAGGACA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCTCTTCTCTCAATTGTaGAATTCTCCACCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLFSQL*NSPPSH
Trigger: ATGGCTTGGTGGAGAATTTCACAATTGAGAGAAGAG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTTTACACTCCCTGTATaGATGGTTTCTTCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQFTLPV*MVSSAD
Trigger: ATCTGCCGAAGAAACCATTCATACAGGGAGTGTAAA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTACACTTCCATCATTaGGTAAGACATTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLHFHH*VRHCTP
Trigger: TGGAGTACAATGTCTTACTCAATGATGGAAGTGTAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCAGTGTTATATTCTGTaGAAACAATTTTCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTQCYIL*KQFSRR
Trigger: CCGACGAGAAAATTGTTTTCACAGAATATAACACTG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGACAGGTATGCCCAGCTaGATTCCAAGTGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQTGMPS*IPSVDF
Trigger: AAAATCTACACTTGGAATTCAGCTGGGCATACCTGT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTTGGAGGTTTCCAGGTaGTTTCTATTGATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLEVSR*FLLILS
Trigger: GCTCAGAATCAATAGAAATCACCTGGAAACCTCCAA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTCACTGCCCAGACCTaGTACTCATACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFTAQT*YSYSVK
Trigger: TTTCACAGAGTATGAGTATCAGGTCTGGGCAGTGAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGATTGTGTCAACCCTaGCAGAAATGGCAGATAGAA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGLCQP*QKWQIE
Trigger: TTCTATCTGCCATTTCTGTCAGGGTTGACACAATCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAAGCAGCCAGTCTCAATaGAAAGCAAACTATTTACTA +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQSSQSQ*KANYLL
Trigger: TAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCT...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGAAGACATGAGTAGCTaGTGGTATCATTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLEDMSS*WYHFFI
Trigger: AATAAAGAAATGATACCAGCAGCTACTCATGTCTTC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAACTCTGTCCTATTTaGACAGTACCAGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKLCPI*TVPDAK
Trigger: TTTTGCATCTGGTACTGTGCAAATAGGACAGAGTTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAAACTCTGTCCTATTTaGACAGTACCAGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTKLCPI*TVPDAK
Trigger: TTTTGCATCTGGTACTGTGCAAATAGGACAGAGTTT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTTCCTGTAGTGTTATaGTCACAATCATCACAAACT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLPVVL*SQSSQT
Trigger: AGTTTGTGATGATTGTGAGCATAACACTACAGGAAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCGTTTGCTTTGCACTTaGACTGGCCTGAATTTTGGT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSRLLCT*TGLNFG
Trigger: ACCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCATAAAAGTTTTCTCTaGAGGTGTCACACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDHKSFL*RCHTEV
Trigger: GACTTCAGTGTGACACCTGCAGAGAAAACTTTTATG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCCTCCAAACATTTATTaGACTGTCTCCCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLPPNIY*TVSLQH
Trigger: ATGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAAGAACTATGTGCACTaGCAAATCCATTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQKNYVH*QIHWRQ
Trigger: TTGCCTCCAATGGATTTGGCAGTGCACATAGTTCTT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTTCACTGTGAAAGCATaGACGGTAGGGCTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQFTVKA*TVGLLN
Trigger: ATTTAACAGCCCTACCGTGCATGCTTTCACAGTGAA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTCCTGCAGAATTCACTaGCCAGACCTGATACTCATA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSCRIH*PDLILI
Trigger: TATGAGTATCAGGTCTGGGCAGTGAATTCTGCAGGA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGAACTCTGTGCTTTTaGTCCGCGATCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSRTLCF*SAIPSF
Trigger: AAAAGAAGGGATCGCGGAGCAAAAGCACAGAGTTCT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCATACAGGCTTCTGTCTaGCCTAAGCTATGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSIQASV*PKLWSQ
Trigger: TTGACTCCATAGCTTAGGGCAGACAGAAGCCTGTAT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGACATGAGTAGCTGCTaGTATCATTTCTTTATTGCA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTDMSSC*YHFFIA
Trigger: TGCAATAAAGAAATGATACCAGCAGCTACTCATGTC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCTTGCAGAATTGCTATaGGCGTTAGGATGCAGATCA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSLAELL*ALGCRS
Trigger: TGATCTGCATCCTAACGCCCATAGCAATTCTGCAAG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTATTTCCGTTGGTTGTaGACTAAAGAACTGAATGAT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLYFRWL*TKELND
Trigger: ATCATTCAGTTCTTTAGTCCACAACCAACGGAAATA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAATCCTTATTTCCGTTaGTTGTGGACTAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPNPYFR*LWTKEL
Trigger: CAGTTCTTTAGTCCACAACCAACGGAAATAAGGATT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTATCGTACTTGGCAAATaGAACCAGATTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIIVLGK*NQIPDG
Trigger: ACCATCTGGAATCTGGTTCCATTTGCCAAGTACGAT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATCGTACTTGGCAAATaGAACCAGATTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVIVLGK*NQIPDG
Trigger: ACCATCTGGAATCTGGTTCCATTTGCCAAGTACGAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGGAAACCACCTAAGATaGATTGTTGTGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDGNHLR*IVVLLI
Trigger: AATCAACAGCACAACAATCCATCTTAGGTGGTTTCC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATTTGGCTTGGATGGTaGTTGCCAAGAAATCACAAC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVIWLGW*LPRNHN
Trigger: GTTGTGATTTCTTGGCAACCACCATCCAAGCCAAAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCAAATTAGGTCCATTTaGCTTGGATGGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSQIRSI*LGWWLP
Trigger: TGGCAACCACCATCCAAGCCAAATGGACCTAATTTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGTTGGTATATCACTTaGAGTGTCTTCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVCWYIT*SVFHSG
Trigger: ACCACTGTGGAAGACACTCCAAGTGATATACCAACA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGAATTAAGATCCATTaGGGCTGCTTCAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRIKIH*GCFRCF
Trigger: AAAACACCTGAAGCAGCCCCAATGGATCTTAATTCT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGATTTGGTTTTTCAGGTaGCATCCACTTAATCTCTAT +
Preference number: 4 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLIWFFR*HPLNLY
Trigger: ATAGAGATTAAGTGGATGCCACCTGAAAAACCAAAT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAAAATTTCTCCTGCATaGTTTGCAGCCACAACACCA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVKISPA*FAATTP
Trigger: TGGTGTTGTGGCTGCAAACCATGCAGGAGAAATTTT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTCACACTGCGTCCATaGTTGCAAACCTGTGTCATT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFTLRP*LQTCVI
Trigger: AATGACACAGGTTTGCAACCATGGACGCAGTGTGAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGCCATTTGGGTTTCTTaGAGGTTTCCAGGTGATTTC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSAIWVS*RFPGDF
Trigger: GAAATCACCTGGAAACCTCCAAGAAACCCAAATGGC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATATTGTGGAACATCAGTaGGTCTCAACATTAGAACAC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDIVEHQ*VSTLEH
Trigger: GTGTTCTAATGTTGAGACCCACTGATGTTCCACAAT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATATTTCTTCCAGATTGTaGAACATCAGTGGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDISSRL*NISGSQ
Trigger: TTGAGACCCACTGATGTTCCACAATCTGGAAGAAAT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCGTAAGCTGAGAATGTaGCATGTACAATTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTRKLRM*HVQLVK
Trigger: TTTTACCAATTGTACATGCCACATTCTCAGCTTACG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTCAGTCAAGGATATTaGAGCAAAATAGGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLSQGY*SKIGKD
Trigger: ATCTTTGCCTATTTTGCTTCAATATCCTTGACTGAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTACCTGCACACTAAGATaGATCCATTTCTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTITCTLR*IHFFTR
Trigger: TCTTGTGAAGAAATGGATTCATCTTAGTGTGCAGGT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCAACATCATTATCATTaGCAAAAGAGAGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVQHHYH*QKREDG
Trigger: CCCATCCTCTCTCTTTTGTCAATGATAATGATGTTG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGACAAGGTTTACAATTaGAAGCGTAAACTTGATCAC +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDDKVYN*KRKLDH
Trigger: GTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTCATTCAAGGCTCCTaGGAGATGACAATTACAAGG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFIQGS*EMTITR
Trigger: CCTTGTAATTGTCATCTCTCAGGAGCCTTGAATGAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCACACTTTGAGCCAGTaGCAAATTGTTTACAGAAAC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVHTLSQ*QIVYRN
Trigger: GTTTCTGTAAACAATTTGTCACTGGCTCAAAGTGTG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTACAAGCATCACACTTTaGGCCAGTGACAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTITSITL*ASDKLF
Trigger: AAACAATTTGTCACTGGCTCAAAGTGTGATGCTTGT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTGGAGACCATTCTACATaGAGTTCTGTAGAACTGATT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIGDHST*SSVELI
Trigger: AATCAGTTCTACAGAACTTCATGTAGAATGGTCTCC...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGTTCAGAAAGCATATTaGTGTCATACCCCACAACTT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVVQKAY*CHTPQL
Trigger: AAGTTGTGGGGTATGACATCAATATGCTTTCTGAAC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGGTTCCCAAATAGCTaGCGGATTGTAATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRFPNS*RIVILH
Trigger: ATGAAGAATTACAATCCGTCAGCTATTTGGGAACCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTACTGCATAGTTTTTaGAGGGTAGCAAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSLLHSF*RVASLS
Trigger: TGACAGGCTTGCTACCCTTCAAAAACTATGCAGTAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGGGATCCCTGTGTTTTaGCAAACACATTTACTGTTC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSGIPVF*QTHLLF
Trigger: GAACAGTAAATGTGTTTGTCAAAACACAGGGATCCC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGACCAACATCATTCTTaGCTTCACATCCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVDQHHS*LHIQKN
Trigger: ATTCTTCTGGATGTGAAGTCAAGAATGATGTTGGTC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACACATTTCTTCAATTaGTGCCTTCCCTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTHFFN*CLPCGI
Trigger: AATTCCACAGGGAAGGCATCAATTGAAGAAATGTGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCCACAACTTCCATTTTaGCATGCTTGTATCCTTATC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQPQLPF*HACILI
Trigger: GATAAGGATACAAGCATGTCAAAATGGAAGTTGTGG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTGGAGGTTTCCAGGTaGTTTCTATTGATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSLEVSR*FLLILS
Trigger: GCTCAGAATCAATAGAAATCACCTGGAAACCTCCAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGAAATGAACAGCAGTaGCATCCTTTCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRNEQQ*HPFNRI
Trigger: GATTCTGTTGAAAGGATGTCACTGCTGTTCATTTCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGGTGACAGACATTTTTaGACCGTAATTGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVGDRHF*TVIGTV
Trigger: AACAGTACCAATTACGGTTCAAAAATGTCTGTCACC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCCATTTTCTGGAAACTaGAGACACGTTCTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSPFSGN*RHVLRV
Trigger: TACTCTGAGAACGTGTCTGCAGTTTCCAGAAAATGG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCCAAAAATAAAACTTaGAGAATTGCTATGGGCGTT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSKNKT*RIAMGV
Trigger: AACGCCCATAGCAATTCTGCAAGTTTTATTTTTGGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCAATGTGATTGGGCATaGAATCTGAGAAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSQCDWA*NLRRSP
Trigger: TGGAGATCTTCTCAGATTGCATGCCCAATCACATTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTTTGGAATGGCTGTTaGATTGACAAGGTTTACAAT +
Preference number: 4 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPFWNGC*IDKVYN
Trigger: ATTGTAAACCTTGTCAATGCAACAGCCATTCCAAAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATTTTGGAATGGCTGTTaGATTGACAAGGTTTACAAT +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQFWNGC*IDKVYN
Trigger: ATTGTAAACCTTGTCAATGCAACAGCCATTCCAAAA...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTTCCTGTAGTGTTATaGTCACAATCATCACAAACT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLPVVL*SQSSQT
Trigger: AGTTTGTGATGATTGTGAGCATAACACTACAGGAAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTCATAAAAGTTTTCTCTaGAGGTGTCACACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIHKSFL*RCHTEV
Trigger: GACTTCAGTGTGACACCTGCAGAGAAAACTTTTATG...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCAAAGTAATGGTCTTTaGATTGGTCACAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSQSNGL*IGHNVA
Trigger: GGCAACGTTGTGACCAATGCAAAGACCATTACTTTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGATCAGTTATCAAGCTaGCTTGGCTATTTGAAATAT +
Preference number: 4 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTDQLSS*LGYLKY
Trigger: ATATTTCAAATAGCCAAGGCAGCTTGATAACTGATC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGCTCCTGGAGGCATTaGAATTGTTATAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSSWRH*NCYRIS
Trigger: ACTGATCCTATAACAATTGCAATGCCTCCAGGAGCT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAAGATCCATTGGGGCTaGTTCAGGTGTTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSKIHWG*FRCFDK
Trigger: TTTGTCAAAACACCTGAAGCAGCCCCAATGGATCTT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGTCACTGCCAGATGTaGACAATTATTTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSHCQM*TIISDA
Trigger: AGCATCTGAAATAATTGTGCACATCTGGCAGTGACT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGACATGAGTAGCTGCTaGTATCATTTCTTTATTGCA +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLDMSSC*YHFFIA
Trigger: TGCAATAAAGAAATGATACCAGCAGCTACTCATGTC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCGATACTCCATTTTCTaGAAACTGCAGACACGTTCT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSRYSIF*KLQTRS
Trigger: AGAACGTGTCTGCAGTTTCCAGAAAATGGAGTATCG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATTTGTAAGTGCCACTTaGTATAATCGAAAATCTTGC +
Preference number: 4 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQFVSAT*YNRKSC
Trigger: GCAAGATTTTCGATTATACCAAGTGGCACTTACAAA...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATTGCCACGGGAATATaGAGTAAAATTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVIATGI*SKIGKL
Trigger: CAGCTTTCCAATTTTACTCCATATTCCCGTGGCAAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATTCAGTTCTTCAGGTaGAAACCACCTAAGATGGAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVIQFFR*KPPKMD
Trigger: ATCCATCTTAGGTGGTTTCCACCTGAAGAACTGAAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTATTCAGTTCTTCAGGTaGAAACCACCTAAGATGGAT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIIQFFR*KPPKMD
Trigger: ATCCATCTTAGGTGGTTTCCACCTGAAGAACTGAAT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCCCACAAAACCTTTTTaGATTATCTCAGGATCCTTC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQPTKPF*IISGSF
Trigger: GAAGGATCCTGAGATAATCCAAAAAGGTTTTGTGGG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACCATGAAACATATATaGATGAAGTTCCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTMKHI*MKFQEP
Trigger: GGGTTCCTGGAACTTCATCCATATATGTTTCATGGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTTCATATTTTGTCCATaGGCTAAGAGCAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDFIFCP*AKSRSL
Trigger: AAGACTTCTGCTCTTAGCCCATGGACAAAATATGAA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCATTTGGCTTGGATGGTaGTTGCCAAGAAATCACAAC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSIWLGW*LPRNHN
Trigger: GTTGTGATTTCTTGGCAACCACCATCCAAGCCAAAT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCACGAATTGTGGGTGTTaGTATATCACTTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSTNCGC*YITWSV
Trigger: GACACTCCAAGTGATATACCAACACCCACAATTCGT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGAATTAAGATCCATTaGGGCTGCTTCAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQRIKIH*GCFRCF
Trigger: AAAACACCTGAAGCAGCCCCAATGGATCTTAATTCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGTAGAGGTATCATATTaGATCAACGGCGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVVEVSY*INGVLT
Trigger: TGTTAAGACGCCGTTGATCCAATATGATACCTCTAC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAAAAGTTTGTCGACCTaGTGCAAAGTTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQKSLST*CKVWDS
Trigger: TGAATCCCAAACTTTGCACCAGGTCGACAAACTTTT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCAACATCATTATCATTaGCAAAAGAGAGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSQHHYH*QKREDG
Trigger: CCCATCCTCTCTCTTTTGTCAATGATAATGATGTTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGGCCTTACAATTGGTaGCATCTAACCCATAAAAGT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSRPYNW*HLTHKS
Trigger: ACTTTTATGGGTTAGATGTCACCAATTGTAAGGCCT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATTTGGCCAAAAGCCTaGTGCCTAATAGCAATTATT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVIWPKA*CLIAII
Trigger: AATAATTGCTATTAGGCATCAGGCTTTTGGCCAAAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCATACTGCTAAATCTGTaGCTATGTAGTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSILLNL*LCSSPH
Trigger: GTGAGGAGAACTACATAGTCACAGATTTAGCAGTAT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACGTATTGTAGCATATaGTCCTGGAAAAGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTYCSI*SWKSSV
Trigger: TACAGAACTTTTCCAGGATCATATGCTACAATACGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGCTTTCAGCTGATATaGATATTCCTGAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSFQLI*IFLKWL
Trigger: CAACCATTTCAGGAATATTCATATCAGCTGAAAGCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTTACACTTCCATCATTaGGTAAGACATTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQLHFHH*VRHCTP
Trigger: TGGAGTACAATGTCTTACTCAATGATGGAAGTGTAA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGATACTCATACTCTGTaGAAGGCAATAGTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSDTHTL*KAIVRN
Trigger: ATTCCGAACTATTGCCTTTCACAGAGTATGAGTATC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCTCACAGAGCTAGATaGAATCTCAATACCCAAAAA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSHRAR*NLNTQK
Trigger: TTTTTGGGTATTGAGATTTCATCTAGCTCTGTGAGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCATGGATGCCAGCATaGTTTTTACATCAGTATATG +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSWMPA*FLHQYM
Trigger: CATATACTGATGTAAAAATCATGCTGGCATCCATGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTGTAACTTTTTAGGGTaGCATTGCTTGACACATCAG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSCNFLG*HCLTHQ
Trigger: CTGATGTGTCAAGCAATGTCACCCTAAAAAGTTACA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674083.1
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGAAGACATGAGTAGCTaGTGGTATCATTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLEDMSS*WYHFFI
Trigger: AATAAAGAAATGATACCAGCAGCTACTCATGTCTTC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGTTTGAACACAATCTaGCCATCTACTGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSLNTI*PSTVFS
Trigger: AGAAAAGACAGTAGATGGGCAGATTGTGTTCAAACT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAGTTTGAACACAATCTaGCCATCTACTGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTISLNTI*PSTVFS
Trigger: AGAAAAGACAGTAGATGGGCAGATTGTGTTCAAACT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACTTTTATTGGAGGTTaGAAACCATTTACTGTGCGA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTFIGG*KPFTVR
Trigger: TCGCACAGTAAATGGTTTGCAACCTCCAATAAAAGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCATTCTTCCGACAAACTaGTCTAAACCATTTAAACTC +
Preference number: 4 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLILPTN*SKPFKL
Trigger: GAGTTTAAATGGTTTAGAGCAGTTTGTCGGAAGAAT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCATAAAAGTTTTCTCTaGAGGTGTCACACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSHKSFL*RCHTEV
Trigger: GACTTCAGTGTGACACCTGCAGAGAAAACTTTTATG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGTAGAACTGATTTTCTaGATCTTAGGTGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVVELIF*ILGGLS
Trigger: ACTAAGTCCACCTAAGATGCAGAAAATCAGTTCTAC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGTGTATGGGTGTAAATaGATCACTGTGCAATTAGTG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSVYGCK*ITVQLV
Trigger: CACTAATTGCACAGTGATGCATTTACACCCATACAC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCACTTGTAAGTGTATCTaGTATTGGGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSTCKCI*YWAPGF
Trigger: AAAACCTGGAGCCCAATAGCAGATACACTTACAAGT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGTTTGTCGACCTGGTaGAAAGTTTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSLSTW*KVWDSF
Trigger: AAATGAATCCCAAACTTTGCACCAGGTCGACAAACT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCTTAGTAGAAACTGGTaGGGTGTAAATACTGCTAAA +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLSRNW*GVNTAK
Trigger: TTTAGCAGTATTTACACCCCACCAGTTTCTACTAAG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAAGCTGAGCAGCATATaGTATCTGACATATTCACAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQKLSSI*YLTYSH
Trigger: ATGTGAATATGTCAGATACCATATGCTGCTCAGCTT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCCATTACAGCATTTCTaGCTCTTTGGAATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQPLQHF*LFGISS
Trigger: TGAACTTATTCCAAAGAGCCAGAAATGCTGTAATGG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTTCATACCTGTGAAATaGCTTCAGCTGGTTTACTAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVFIPVK*LQLVYY
Trigger: ATAGTAAACCAGCTGAAGCCATTTCACAGGTATGAA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTTCAAGAAACATGTCCTaGCACATACTTCACAAAAAG +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTISRNMS*HILHKK
Trigger: CTTTTTGTGAAGTATGTGCCAGGACATGTTTCTTGA...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAAGGCCCAATTACTGTaGTATTATATGGAGGATAGA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSKAQLL*YYMEDR
Trigger: TCTATCCTCCATATAATATCACAGTAATTGGGCCTT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR TCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCAGTGTTATATTCTGTaGAAACAATTTTCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSQCYIL*KQFSRR
Trigger: CCGACGAGAAAATTGTTTTCACAGAATATAACACTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTTCCAAAAATAAAACTTaGAGAATTGCTATGGGCGTT +
Preference number: 4 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTISKNKT*RIAMGV
Trigger: AACGCCCATAGCAATTCTGCAAGTTTTATTTTTGGA...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTATAATCGAAAATCTTaGATTCTTCCGACAAACTGC +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQYNRKS*ILPTNC
Trigger: GCAGTTTGTCGGAAGAATGCAAGATTTTCGATTATA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGTAGAACTGATTTTCTaGATCTTAGGTGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSVELIF*ILGGLS
Trigger: ACTAAGTCCACCTAAGATGCAGAAAATCAGTTCTAC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTACTTTACAAGTTTTTaGCTGTCTCTGGTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQYFTSF*LSLVVD
Trigger: ATCTACAACCAGAGACAGGCAAAAACTTGTAAAGTA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTATTTCCGTTGGTTGTaGACTAAAGAACTGAATGAT +
Preference number: 4 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVYFRWL*TKELND
Trigger: ATCATTCAGTTCTTTAGTCCACAACCAACGGAAATA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAAGCTGAGCAGCATATaGTATCTGACATATTCACAT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSKLSSI*YLTYSH
Trigger: ATGTGAATATGTCAGATACCATATGCTGCTCAGCTT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTTGACACTTATGGTTaGCAAACTTTGTCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFDTYG*QTLSRS
Trigger: ACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTGTATAATAGAGGCTTaGCACGCAATACCACTTAAA +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSCIIEA*HAIPLK
Trigger: TTTAAGTGGTATTGCGTGCCAAGCCTCTATTATACA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
3UTR CAA 72 bp ATGGTAGTTCGTAAGCTGAGAATGTGGCATGTACAATaGGTAAAATGTGAGTCAGGAGATTTAAATTTAAAG +
Preference number: 4 (lower is better)
Translates to: MVVRKLRMWHVQ*VKCESGDLNLK
Trigger: CTTTAAATTTAAATCTCCTGACTCACATTTTACCAATTGTACATGCCACATTCTCAGCTTACGAACTACCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGAAGACATGAGTAGCTaGTGGTATCATTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSEDMSS*WYHFFI
Trigger: AATAAAGAAATGATACCAGCAGCTACTCATGTCTTC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTTTGGAATGGCTGTTaGATTGACAAGGTTTACAAT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFWNGC*IDKVYN
Trigger: ATTGTAAACCTTGTCAATGCAACAGCCATTCCAAAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR GCA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTACTTTACAAGTTTTTaGCTGTCTCTGGTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSYFTSF*LSLVVD
Trigger: ATCTACAACCAGAGACAGGCAAAAACTTGTAAAGTA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp GTCTGGAGGGGCTTCATCTGTCCACAGAGGCTGAGGCGCCGAGTGTaGACAACCTGCTCTGGTGCAGGCCTCCAGGGTCAGTGTGTAGAG +
Preference number: 5 (lower is better)
Translates to: VWRGFICPQRLRRRV*TTCSGAGLQGQCVE
Trigger: CTCTACACACTGACCCTGGAGGCCTGCACCAGAGCAGGTTGTGCACACTCGGCGCCTCAGCCTCTGTGGACAGATGAAGCCCCTCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp GGCTTCATCTGTCCACAGAGGCTGAGGCGCCGAGTGTGCACAACCTaGTCTGGTGCAGGCCTCCAGGGTCAGTGTGTAGAGAGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GFICPQRLRRRVCTT*SGAGLQGQCVESER
Trigger: CCTTTCACTCTCTACACACTGACCCTGGAGGCCTGCACCAGAGCAGGTTGTGCACACTCGGCGCCTCAGCCTCTGTGGACAGATGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp GTGTCTCCTGCATCATTAGGAATGCAGTACCGCTGTGCCAAAGGGTaGACCCGCGGGTGGCTGCCAGGGCAACGGCAATGTGATTGGGCA +
Preference number: 5 (lower is better)
Translates to: VSPASLGMQYRCAKG*TRGWLPGQRQCDWA
Trigger: TGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATTCCTAATGATGCAGGAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp ACTGGTGGACTTCACAGAGTGGACAGTAGGAGCCAGCTGAGAGTCTaGAGGGGCTTCATCTGTCCACAGAGGCTGAGGCGCCGAGTGTGC +
Preference number: 5 (lower is better)
Translates to: TGGLHRVDSRSQLRV*RGFICPQRLRRRVC
Trigger: GCACACTCGGCGCCTCAGCCTCTGTGGACAGATGAAGCCCCTCCAGACTCTCAGCTGGCTCCTACTGTCCACTCTGTGAAGTCCACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GGGTTCCAGCACTGTCACCACAGGTGGCTGCACCCCAGCAGGTCGTaGGGGTCTTGTGGTAACTTCTACCCAAGCACTGCTGTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: GFQHCHHRWLHPSRS*GSCGNFYPSTAVCA
Trigger: GGCACAAACAGCAGTGCTTGGGTAGAAGTTACCACAAGACCCTCACGACCTGCTGGGGTGCAGCCACCTGTGGTGACAGTGCTGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp GGTGAAACTGATCCACTCGGAAGCCGTACTGCCCACCTCGTTGTGTaGCACCACTCTCAGCTTGTATGTGGTGTAGGGCTGGAGACCCCC +
Preference number: 5 (lower is better)
Translates to: GETDPLGSRTAHLVV*HHSQLVCGVGLETP
Trigger: GGGGGTCTCCAGCCCTACACCACATACAAGCTGAGAGTGGTGGCACACAACGAGGTGGGCAGTACGGCTTCCGAGTGGATCAGTTTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp ATTATCAGCTGTGTCTCCTGCATCATTAGGAATGCAGTACCGCTGTaGCAAAGGGTGGACCCGCGGGTGGCTGCCAGGGCAACGGCAATG +
Preference number: 5 (lower is better)
Translates to: IISCVSCIIRNAVPL*QRVDPRVAARATAM
Trigger: CATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATTCCTAATGATGCAGGAGACACAGCTGATAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp ACTGACGATCCCGTTGGGCTTCCCAGGGGCACTGATGTTGACCACTaGTTGGGTAGAAGAGATCACATGGAACGTGGGGGCTCTGAGACC +
Preference number: 5 (lower is better)
Translates to: TDDPVGLPRGTDVDH*LGRRDHMERGGSET
Trigger: GGTCTCAGAGCCCCCACGTTCCATGTGATCTCTTCTACCCAAGCAGTGGTCAACATCAGTGCCCCTGGGAAGCCCAACGGGATCGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp TCATTAGGAATGCAGTACCGCTGTGCCAAAGGGTGGACCCGCGGGTaGCTGCCAGGGCAACGGCAATGTGATTGGGCATGCAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: SLGMQYRCAKGWTRG*LPGQRQCDWACNLR
Trigger: TCTCAGATTGCATGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATTCCTAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp GGAGAGCCAGGAGCGTTATTACGAGCTGGTGTAGACCAGACAACCTaGAGACTGGTTGGAGTGGCAGATGAAAGCCTGGGAGGCAGCACG +
Preference number: 5 (lower is better)
Translates to: GEPGALLRAGVDQTT*RLVGVADESLGGST
Trigger: CGTGCTGCCTCCCAGGCTTTCATCTGCCACTCCAACCAGTCTTCAGGTTGTCTGGTCTACACCAGCTCGTAATAACGCTCCTGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp GAGAACCCTGGGAGTAGGTTAGGCTGGTTTGGTTTTGACTCGGGATaGGCAGGACACATGCACTCCGGTTGCTGCGGATACTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: ENPGSRLGWFGFDSG*AGHMHSGCCGYSQV
Trigger: CACCTGTGAGTATCCGCAGCAACCGGAGTGCATGTGTCCTGCGCATCCCGAGTCAAAACCAAACCAGCCTAACCTACTCCCAGGGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp ACGATCCCGTTGGGCTTCCCAGGGGCACTGATGTTGACCACTGCTTaGGTAGAAGAGATCACATGGAACGTGGGGGCTCTGAGACCTTCT +
Preference number: 5 (lower is better)
Translates to: TIPLGFPGALMLTTA*VEEITWNVGALRPS
Trigger: AGAAGGTCTCAGAGCCCCCACGTTCCATGTGATCTCTTCTACCCAAGCAGTGGTCAACATCAGTGCCCCTGGGAAGCCCAACGGGATCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp CTGTACACGCGTCGCCCTCCGTCGGTTAACACGTACTCCTTCAGTTaGCCGTTCAGGAGGAAGGTGTCACTCCAGTTCACACACACCACA +
Preference number: 5 (lower is better)
Translates to: LYTRRPPSVNTYSFS*PFRRKVSLQFTHTT
Trigger: TGTGGTGTGTGTGAACTGGAGTGACACCTTCCTCCTGAACGGCCAACTGAAGGAGTACGTGTTAACCGACGGAGGGCGACGCGTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp CCTGGAAAAAGAAGGTTTTGTCCGCCGTTCTCGGTATGTAGAGGGTaGTGTCCAAGCCGCTGTACACGCGTCGCCCTCCGTCGGTTAACA +
Preference number: 5 (lower is better)
Translates to: PGKRRFCPPFSVCRG*CPSRCTRVALRRLT
Trigger: TGTTAACCGACGGAGGGCGACGCGTGTACAGCGGCTTGGACACCACCCTCTACATACCGAGAACGGCGGACAAAACCTTCTTTTTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GCCATGGCCATCATGAAGCCTCCCAGCACAGCAAATCTGGTTTCCTaGGGTGGAGTACGGCATTCTGCCACAGCAGGAATCACCAATGCC +
Preference number: 5 (lower is better)
Translates to: AMAIMKPPSTANLVS*GGVRHSATAGITNA
Trigger: GGCATTGGTGATTCCTGCTGTGGCAGAATGCCGTACTCCACCTCAGGAAACCAGATTTGCTGTGCTGGGAGGCTTCATGATGGCCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp CACAACCTGCTCTGGTGCAGGCCTCCAGGGTCAGTGTGTAGAGAGTaGAAGGATCCAGGCGGCGGAAGAGAAACTGACGATTCAAACCAG +
Preference number: 5 (lower is better)
Translates to: HNLLWCRPPGSVCRE*KDPGGGRETDDSNQ
Trigger: CTGGTTTGAATCGTCAGTTTCTCTTCCGCCGCCTGGATCCTTTCACTCTCTACACACTGACCCTGGAGGCCTGCACCAGAGCAGGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp CATTTGAGTGGCACTGACGGCCCAAAGATCTGGAGGGCTGACTTCTaGTGGAGCAGCCTCCAGAGTTGTGATGCTGGTGGGTTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: HLSGTDGPKIWRADF*WSSLQSCDAGGFAG
Trigger: ACCAGCAAACCCACCAGCATCACAACTCTGGAGGCTGCTCCATCAGAAGTCAGCCCTCCAGATCTTTGGGCCGTCAGTGCCACTCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TGGACCCGCGGGTGGCTGCCAGGGCAACGGCAATGTGATTGGGCATaGAATCTGAGAAGATCTCCAGAGAAGACTTCCAGAATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: WTRGWLPGQRQCDWA*NLRRSPEKTSRISL
Trigger: CAGAGAGATTCTGGAAGTCTTCTCTGGAGATCTTCTCAGATTGCATGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp AAAGGGTGGACCCGCGGGTGGCTGCCAGGGCAACGGCAATGTGATTaGGCATGCAATCTGAGAAGATCTCCAGAGAAGACTTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KGWTRGWLPGQRQCD*ACNLRRSPEKTSRI
Trigger: GATTCTGGAAGTCTTCTCTGGAGATCTTCTCAGATTGCATGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp CCCCGTGTACTTTGTTTCTATTTGGCTGGGAGTACAGGGGAGGGCTaGGTCAGGAGGGCAAGCCACGTGGAATTGGAGTTCATAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PRVLCFYLAGSTGEG*VRRASHVELEFIAV
Trigger: CACAGCTATGAACTCCAATTCCACGTGGCTTGCCCTCCTGACTCAGCCCTCCCCTGTACTCCCAGCCAAATAGAAACAAAGTACACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp TCAGGCTCAGTCCAGGAGACATTAAAGGAGTCAGGTGAATATGAGTaGGCTTTGGGGGCTGGCACGCCTTCGGGTATGTCCTCGTCAGTT +
Preference number: 5 (lower is better)
Translates to: SGSVQETLKESGEYE*ALGAGTPSGMSSSV
Trigger: AACTGACGAGGACATACCCGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATTCACCTGACTCCTTTAATGTCTCCTGGACTGAGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp CCATTTGGCTGCAGCGGTCCTGTCCACAAAAGAGAAACAGTTGGCTaGAATCCTCCTGGAGCCATTTGTACCTCCAGATGTGGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: PFGCSGPVHKRETVG*NPPGAICTSRCGGG
Trigger: ACCCCCTCCACATCTGGAGGTACAAATGGCTCCAGGAGGATTCCAGCCAACTGTTTCTCTTTTGTGGACAGGACCGCTGCAGCCAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGTACTGCCCACCTCGTaGTGTGCCACCACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLVLPTS*CATTLS
Trigger: GCTGAGAGTGGTGGCACACAACGAGGTGGGCAGTAC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp TTGCTCACAATCTGTCTGCCACAGCACTTCTGGCCATGGCCATCATaGAGCCTCCCAGCACAGCAAATCTGGTTTCCTGAGGTGGAGTAC +
Preference number: 5 (lower is better)
Translates to: LLTICLPQHFWPWPS*SLPAQQIWFPEVEY
Trigger: GTACTCCACCTCAGGAAACCAGATTTGCTGTGCTGGGAGGCTTCATGATGGCCATGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp AGAGTCCATGTTCTCTGGCAGGGCCTCCATTGTCCAGGCAGATTTTaGCACACTAGCTGTGCAACCTCCATTCGTGCAGGCTACAAGGGA +
Preference number: 5 (lower is better)
Translates to: RVHVLWQGLHCPGRF*HTSCATSIRAGYKG
Trigger: TCCCTTGTAGCCTGCACGAATGGAGGTTGCACAGCTAGTGTGTCAAAATCTGCCTGGACAATGGAGGCCCTGCCAGAGAACATGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp TCACCATTTGTTCTCACTGGAGGGTCCCAGTTCACTAAGATCTCCTaGGGACCCCTGGCCTGCAATTTTGGAGGTTCCATCCCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SPFVLTGGSQFTKIS*GPLACNFGGSIPEG
Trigger: ACCCTCAGGGATGGAACCTCCAAAATTGCAGGCCAGGGGTCCTCAGGAGATCTTAGTGAACTGGGACCCTCCAGTGAGAACAAATGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GATGTGGAGGGGGTTGCATCAAAGGTGCAATCTCAGGGGTCTGTATaGATGTCCAGTCACTTGATGCACATCCCAGGGTGGTGCACGCTT +
Preference number: 5 (lower is better)
Translates to: DVEGVASKVQSQGSV*MSSHLMHIPGWCTL
Trigger: AAGCGTGCACCACCCTGGGATGTGCATCAAGTGACTGGACATTCATACAGACCCCTGAGATTGCACCTTTGATGCAACCCCCTCCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp GGAAGACTTGGGTGCCCAGGTAAAGTATTCTGCAGAGCAAACACTTaGTTACCTGAAGCTCAGAGCGTGGTCTGCTTGGTGGCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GRLGCPGKVFCRANT*LPEAQSVVCLVALL
Trigger: CAAGAGGGCCACCAAGCAGACCACGCTCTGAGCTTCAGGTAACCAAGTGTTTGCTCTGCAGAATACTTTACCTGGGCACCCAAGTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGACCGCTGTCCCTCGTaGCCTGGCAACGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLDRCPS*PGNAAV
Trigger: TACAGCAGCGTTGCCAGGCAACGAGGGACAGCGGTC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGACTGACGATCCCGTaGGGCTTCCCAGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQRLTIP*GFPGAL
Trigger: CAGTGCCCCTGGGAAGCCCAACGGGATCGTCAGTCT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGGAAGGAGGCCGTCCTaGAGGCCAGCGTCCCGATTT +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPGRRPS*RPASRF
Trigger: AAATCGGGACGCTGGCCTCAAGGACGGCCTCCTTCC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp CTGGGAGTCCACATACTGCTTGGGTTGGCACGATGGAAACTTTCTTaGAAGCTCCCACGTTCTCCAGCCTTGGGAAAAGACCTCGTGACT +
Preference number: 5 (lower is better)
Translates to: LGVHILLGLARWKLS*KLPRSPALGKDLVT
Trigger: AGTCACGAGGTCTTTTCCCAAGGCTGGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp CAACAGGTTCATCCCAGGTCACCTCAATGCTGTATCCATTTAAGCTaGGGACTCTTGAGGGAGTTGGCACACTTTGTGGAGCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: QQVHPRSPQCCIHLS*GLLRELAHFVELLL
Trigger: CAGGAGCAGCTCCACAAAGTGTGCCAACTCCCTCAAGAGTCCGCAGCTTAAATGGATACAGCATTGAGGTGACCTGGGATGAACCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TCCCAGCACAGCAAATCTGGTTTCCTGAGGTGGAGTACGGCATTCTaGCACAGCAGGAATCACCAATGCCAACAGAAACCCGATTGTGCT +
Preference number: 5 (lower is better)
Translates to: SQHSKSGFLRWSTAF*HSRNHQCQQKPDCA
Trigger: AGCACAATCGGGTTTCTGTTGGCATTGGTGATTCCTGCTGTGGCAGAATGCCGTACTCCACCTCAGGAAACCAGATTTGCTGTGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp CTTCTTCTCCACCACAACACTCTAAATCGTTGCTCACAATCTGTCTaGCACAGCACTTCTGGCCATGGCCATCATGAAGCCTCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LLLHHNTLNRCSQSV*HSTSGHGHHEASQH
Trigger: GTGCTGGGAGGCTTCATGATGGCCATGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCAACGATTTAGAGTGTTGTGGTGGAGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TCTTTAATGACGCCGTTTGATTTCTCAGGGACACTCCAGCTCAGATaGAGAGCCACTGCACTTAGGGCTGTGATGCTTGGTGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SLMTPFDFSGTLQLR*RATALRAVMLGGRM
Trigger: CATCCTGCCACCAAGCATCACAGCCCTAAGTGCAGTGGCTCTGCATCTGAGCTGGAGTGTCCCTGAGAAATCAAACGGCGTCATTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp ATGAAGTCCTTCAGTGAAGCTCTCCTGGGAGCAGAGGCATCTATATaGCTGGCTTGTTGTGTCGCAGTTATCGGCATGACCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: MKSFSEALLGAEASI*LACCVAVIGMTMAL
Trigger: CAGTGCCATGGTCATGCCGATAACTGCGACACAACAAGCCAGCCATATAGATGCCTCTGCTCCCAGGAGAGCTTCACTGAAGGACTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp TACCATTTGCCTTTTTGGGTGGGTTCCAGGAGAGCAGCAAAGAACTaGGAAGGGATTTGGCTACTGGTGGCTGAACCTCTTGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: YHLPFWVGSRRAAKN*EGIWLLVAEPLVGL
Trigger: AAGCCCCACAAGAGGTTCAGCCACCAGTAGCCAAATCCCTTCCCAGTTCTTTGCTGCTCTCCTGGAACCCACCCAAAAAGGCAAATGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp AACTCTAGAAATCCATGGGTGGAGTCGCCAGACCTCATCTGGAGTTaGTATCTGGGAGAGCCAGGAGCGTTATTACGAGCTGGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: NSRNPWVESPDLIWS*YLGEPGALLRAGVD
Trigger: GTCTACACCAGCTCGTAATAACGCTCCTGGCTCTCCCAGATACCAACTCCAGATGAGGTCTGGCGACTCCACCCATGGATTTCTAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCCTTCAACATTGGGCTaGCAGATGCACTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRPSTLG*QMHCPV
Trigger: GACAGGGCAGTGCATCTGCAAGCCCAATGTTGAAGG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCCCGTACAGGTGGGCTaGATGGCTTGTTCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSPVQVG*MACSLH
Trigger: GTGAAGGGAACAAGCCATCAAGCCCACCTGTACGGG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGGAAGGAGGCCGTCCTaGAGGCCAGCGTCCCGATTT +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLGRRPS*RPASRF
Trigger: AAATCGGGACGCTGGCCTCAAGGACGGCCTCCTTCC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGTACTGCCCACCTCGTaGTGTGCCACCACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPVLPTS*CATTLS
Trigger: GCTGAGAGTGGTGGCACACAACGAGGTGGGCAGTAC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACACATGCACTCCGGTaGCTGCGGATACTCACAGGT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTHALR*LRILTG
Trigger: ACCTGTGAGTATCCGCAGCAACCGGAGTGCATGTGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp ATAAGAGTTCAGCAGTTCCTGTGGGATTCCTCCCACATAAACTGGTaGATTCACCACCAGTGGCTGGTCTCCGGACTCCGATGCATGCTT +
Preference number: 5 (lower is better)
Translates to: IRVQQFLWDSSHINW*IHHQWLVSGLRCML
Trigger: AAGCATGCATCGGAGTCCGGAGACCAGCCACTGGTGGTGAATTCACCAGTTTATGTGGGAGGAATCCCACAGGAACTGCTGAACTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp ACCTTTCCCAACCTGCCTGATCTGGTACTCTTTAATGACGCCGTTTaGTTTCTCAGGGACACTCCAGCTCAGATGCAGAGCCACTGCACT +
Preference number: 5 (lower is better)
Translates to: TFPNLPDLVLFNDAV*FLRDTPAQMQSHCT
Trigger: AGTGCAGTGGCTCTGCATCTGAGCTGGAGTGTCCCTGAGAAATCAAACGGCGTCATTAAAGAGTACCAGATCAGGCAGGTTGGGAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp ACTGGTGAATTCACCACCAGTGGCTGGTCTCCGGACTCCGATGCATaGTTCATCAGTCCATTCACACTTGCTGATATGAAAGAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: TGEFTTSGWSPDSDA*FISPFTLADMKEPS
Trigger: GGAAGGCTCTTTCATATCAGCAAGTGTGAATGGACTGATGAAGCATGCATCGGAGTCCGGAGACCAGCCACTGGTGGTGAATTCACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp GGTGGGTTTGCTGGTGGAGCATCCTCCACTCGTGCAGGCTTGGAGTaGATAGCTATAGGTGGAAAAAGGAAGAAGCTCTTCATCAGTGTA +
Preference number: 5 (lower is better)
Translates to: GGFAGGASSTRAGLE*IAIGGKRKKLFISV
Trigger: TACACTGATGAAGAGCTTCTTCCTTTTTCCACCTATAGCTATGCACTCCAAGCCTGCACGAGTGGAGGATGCTCCACCAGCAAACCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TGGAATCCTCCTGGAGCCATTTGTACCTCCAGATGTGGAGGGGGTTaGATCAAAGGTGCAATCTCAGGGGTCTGTATGAATGTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: WNPPGAICTSRCGGG*IKGAISGVCMNVQS
Trigger: TGACTGGACATTCATACAGACCCCTGAGATTGCACCTTTGATGCAACCCCCTCCACATCTGGAGGTACAAATGGCTCCAGGAGGATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp GTGACAAAAAGTGCTTCGGTCTGGGAGTCCACATACTGCTTGGGTTaGCACGATGGAAACTTTCTTGAAAGCTCCCACGTTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VTKSASVWESTYCLG*HDGNFLESSHVLQP
Trigger: AGGCTGGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp GTTGCTTGTATTGACAAATTCAGCACTGGCAGAGGGCATGCGGGGTaGACGGGTGCTGTCCTCACTATAGGCTTTCAGAATGTACTTCTC +
Preference number: 5 (lower is better)
Translates to: VACIDKFSTGRGHAG*TGAVLTIGFQNVLL
Trigger: GAGAAGTACATTCTGAAAGCCTATAGTGAGGACAGCACCCGTCCACCCCGCATGCCCTCTGCCAGTGCTGAATTTGTCAATACAAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp AGATATAATCACAGATGTTGGAGTATCAGAGAACAGCTCTGGACTTaGGATCCCTTCCGGTGCCCCTGGGAGTGTCCATACAGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: RYNHRCWSIREQLWT*DPFRCPWECPYSLG
Trigger: TCCCAGACTGTATGGACACTCCCAGGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGATACTCCAACATCTGTGATTATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp AACAGTTGGCTGGAATCCTCCTGGAGCCATTTGTACCTCCAGATGTaGAGGGGGTTGCATCAAAGGTGCAATCTCAGGGGTCTGTATGAA +
Preference number: 5 (lower is better)
Translates to: NSWLESSWSHLYLQM*RGLHQRCNLRGLYE
Trigger: TTCATACAGACCCCTGAGATTGCACCTTTGATGCAACCCCCTCCACATCTGGAGGTACAAATGGCTCCAGGAGGATTCCAGCCAACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp TTTTCCATTTGGCTGCAGCGGTCCTGTCCACAAAAGAGAAACAGTTaGCTGGAATCCTCCTGGAGCCATTTGTACCTCCAGATGTGGAGG +
Preference number: 5 (lower is better)
Translates to: FSIWLQRSCPQKRNS*LESSWSHLYLQMWR
Trigger: CCTCCACATCTGGAGGTACAAATGGCTCCAGGAGGATTCCAGCCAACTGTTTCTCTTTTGTGGACAGGACCGCTGCAGCCAAATGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATGTCTCCCTTCAACATaGGGCTTGCAGATGCACTGC +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLCLPST*GLQMHC
Trigger: GCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGACA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGAATATGAGTGGGCTTaGGGGGCTGGCACGCCTTCG +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLEYEWA*GAGTPS
Trigger: CGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATTC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACACTCGCAGTGAGATaGGCTCCTCTCTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTLAVR*APLSGR
Trigger: TCTTCCAGAGAGAGGAGCCAATCTCACTGCGAGTGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCACTGATGATTTGGTaGTGCCTCCTGTATTCGGCC +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLALMIW*CLLYSA
Trigger: GGCCGAATACAGGAGGCACAACCAAATCATCAGTGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTAGAAAAGGCTCGCTaGAAGTGCACCCAGCAGATG +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLEKAR*KCTQQM
Trigger: CATCTGCTGGGTGCACTTCAAGCGAGCCTTTTCTAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCCGTACAGGTGGGCTaGATGGCTTGTTCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPVQVG*MACSLH
Trigger: GTGAAGGGAACAAGCCATCAAGCCCACCTGTACGGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GGAGAATCAGGTGGACTCCAGGAGAGATTGATAGCAGAAGAACTTTaGACTTGTCCTCTGGGCGGAGGTTGCTGGAATGGAGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GESGGLQERLIAEEL*TCPLGGGCWNGVLL
Trigger: CAGCAAAACTCCATTCCAGCAACCTCCGCCCAGAGGACAAGTTCAAAGTTCTTCTGCTATCAATCTCTCCTGGAGTCCACCTGATTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp AAGGTGCTTCCCACCTCACGTGGGCTTTCCGGGATCCCTGTGTTTTaGCAAACACATTTACTGTTCCTTCAGGAGGAGCTTCTAGAGTTC +
Preference number: 5 (lower is better)
Translates to: KVLPTSRGLSGIPVF*QTHLLFLQEELLEF
Trigger: GAACTCTAGAAGCTCCTCCTGAAGGAACAGTAAATGTGTTTGTCAAAACACAGGGATCCCGGAAAGCCCACGTGAGGTGGGAAGCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp CCTTTACAGGTGGGTGTCTGTGAATGTGGTGCGTTCCTTAGTCACTaGGCTGAAATCCTTGATGGCGTTCATCAGGTCCTCTTCATCCAC +
Preference number: 5 (lower is better)
Translates to: PLQVGVCECGAFLSH*AEILDGVHQVLFIH
Trigger: GTGGATGAAGAGGACCTGATGAACGCCATCAAGGATTTCAGCTCAGTGACTAAGGAACGCACCACATTCACAGACACCCACCTGTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp AGCAGAGCTGTGACAAAAAGTGCTTCGGTCTGGGAGTCCACATACTaGTTGGGTTGGCACGATGGAAACTTTCTTGAAAGCTCCCACGTT +
Preference number: 5 (lower is better)
Translates to: SRAVTKSASVWESTY*LGWHDGNFLESSHV
Trigger: AACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp TACAGAACTGAATACTTTCAGCAGCAGCAGAGCTGTGACAAAAAGTaGTTCGGTCTGGGAGTCCACATACTGCTTGGGTTGGCACGATGG +
Preference number: 5 (lower is better)
Translates to: YRTEYFQQQQSCDKK*FGLGVHILLGLARW
Trigger: CCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCTCTGCTGCTGCTGAAAGTATTCAGTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp AAGCATGCCCTGAGGCTCCCCATCGCAAGTGGTTGCATGAAGTCCTaGACTGTTGATGCTGTGGACTCCATTGAAGACAGAGATAAAGAT +
Preference number: 5 (lower is better)
Translates to: KHALRLPIASGCMKS*TVDAVDSIEDRDKD
Trigger: ATCTTTATCTCTGTCTTCAATGGAGTCCACAGCATCAACAGTGCAGGACTTCATGCAACCACTTGCGATGGGGAGCCTCAGGGCATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TTCCTGAGGTGGAGTACGGCATTCTGCCACAGCAGGAATCACCAATaGCAACAGAAACCCGATTGTGCTGTTCATCTGGACAGCATACTT +
Preference number: 5 (lower is better)
Translates to: FLRWSTAFCHSRNHQ*QQKPDCAVHLDSIL
Trigger: AAGTATGCTGTCCAGATGAACAGCACAATCGGGTTTCTGTTGGCATTGGTGATTCCTGCTGTGGCAGAATGCCGTACTCCACCTCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TGTCTCCTGTCAGTGGTGTCAGTGTGGATGAGACCTTTCCCAACCTaGCTGATCTGGTACTCTTTAATGACGCCGTTTGATTTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: CLLSVVSVWMRPFPT*LIWYSLMTPFDFSG
Trigger: CCCTGAGAAATCAAACGGCGTCATTAAAGAGTACCAGATCAGGCAGGTTGGGAAAGGTCTCATCCACACTGACACCACTGACAGGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp ATCATTTCTTTATTGCATTTCAACCAGTCCCCTCAGTGTGACAAATaGCTCTTCAACAGGACCGCTGTCCCTCGTTGCCTGGCAACGCTG +
Preference number: 5 (lower is better)
Translates to: IISLLHFNQSPQCDK*LFNRTAVPRCLATL
Trigger: CAGCGTTGCCAGGCAACGAGGGACAGCGGTCCTGTTGAAGAGCCATTTGTCACACTGAGGGGACTGGTTGAAATGCAATAAAGAAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp GAAAATAACTCTAGAAATCCATGGGTGGAGTCGCCAGACCTCATCTaGAGTTGGTATCTGGGAGAGCCAGGAGCGTTATTACGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: ENNSRNPWVESPDLI*SWYLGEPGALLRAG
Trigger: ACCAGCTCGTAATAACGCTCCTGGCTCTCCCAGATACCAACTCCAGATGAGGTCTGGCGACTCCACCCATGGATTTCTAGAGTTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp TTGCCAAGATATAATCACAGATGTTGGAGTATCAGAGAACAGCTCTaGACTTGGGATCCCTTCCGGTGCCCCTGGGAGTGTCCATACAGT +
Preference number: 5 (lower is better)
Translates to: LPRYNHRCWSIREQL*TWDPFRCPWECPYS
Trigger: ACTGTATGGACACTCCCAGGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGATACTCCAACATCTGTGATTATATCTTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp TCAGTGGTGTCAGTGTGGATGAGACCTTTCCCAACCTGCCTGATCTaGTACTCTTTAATGACGCCGTTTGATTTCTCAGGGACACTCCAG +
Preference number: 5 (lower is better)
Translates to: SVVSVWMRPFPTCLI*YSLMTPFDFSGTLQ
Trigger: CTGGAGTGTCCCTGAGAAATCAAACGGCGTCATTAAAGAGTACCAGATCAGGCAGGTTGGGAAAGGTCTCATCCACACTGACACCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACCACGTTCTCCAGCCTaGGGAAAAGACCTCGTGACT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLPRSPA*GKDLVT
Trigger: AGTCACGAGGTCTTTTCCCAAGGCTGGAGAACGTGG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACCTTCAACATTGGGCTaGCAGATGCACTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLPSTLG*QMHCPV
Trigger: GACAGGGCAGTGCATCTGCAAGCCCAATGTTGAAGG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGGATAGCAGAAGAACTTaGAACTTGTCCTCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRDSRRT*NLSSGR
Trigger: CCGCCCAGAGGACAAGTTCAAAGTTCTTCTGCTATC...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGGCATCCATCCAGATaGACTCTGACAGCACCGCTG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLRHPSR*TLTAPL
Trigger: CAGCGGTGCTGTCAGAGTCAATCTGGATGGATGCCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTGGAGCTGCTCCTGTaGTACGTCCTCGACTCCAAT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLVELLL*YVLDSN
Trigger: ATTGGAGTCGAGGACGTACAACAGGAGCAGCTCCAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGGAGTTGGCACACTTaGTGGAGCTGCTCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLGSWHT*WSCSCC
Trigger: ACAACAGGAGCAGCTCCACAAAGTGTGCCAACTCCC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGGACTCTTGAGGGAGTaGGCACACTTTGTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQGLLRE*AHFVEL
Trigger: CAGCTCCACAAAGTGTGCCAACTCCCTCAAGAGTCC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATGGTGGCTGAACCTCTaGTGGGGCTTCTTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLWWLNL*WGFLWS
Trigger: ACTCCACAAGAAGCCCCACAAGAGGTTCAGCCACCA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCAACCTGAAGACTGGTaGGAGTGGCAGATGAAAGCC +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSQPEDW*EWQMKA
Trigger: GGCTTTCATCTGCCACTCCAACCAGTCTTCAGGTTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGACCTCATCTGGAGTaGGTATCTGGGAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLRPHLE*VSGRAR
Trigger: CCTGGCTCTCCCAGATACCAACTCCAGATGAGGTCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCCAAGCACTGCTGTTaGTGCCTCCATGAAGAGTGC +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPKHCC*CLHEEC
Trigger: GCACTCTTCATGGAGGCACAAACAGCAGTGCTTGGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCCCATCGCAAGTGGTaGCATGAAGTCCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPPHRKW*HEVLHC
Trigger: ACAGTGCAGGACTTCATGCAACCACTTGCGATGGGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
50% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCCCATCGCAAGTGGTaGCATGAAGTCCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPHRKW*HEVLHC
Trigger: ACAGTGCAGGACTTCATGCAACCACTTGCGATGGGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTAGCTGCAACTACCTaGCTACTGGTGGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLVAATT*LLVAQP
Trigger: TGGCTGTGCCACCAGTAGCAAGGTAGTTGCAGCTAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGATGAGCACTCGTGGCTaGAGCCCAAGGAGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQMSTRG*SPRSWK
Trigger: TTTCCAGCTCCTTGGGCTCAAGCCACGAGTGCTCAT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATGAGCACTCGTGGCTaGAGCCCAAGGAGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLMSTRG*SPRSWK
Trigger: TTTCCAGCTCCTTGGGCTCAAGCCACGAGTGCTCAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATTTCTCCTGCATGGTTaGCAGCCACAACACCAATGC +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLFLLHG*QPQHQC
Trigger: GCATTGGTGTTGTGGCTGCAAACCATGCAGGAGAAA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACCTTCTGGAGGTGCTaGCAATGTCCTCACCACATT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTFWRC*QCPHHI
Trigger: AATGTGGTGAGGACATTGCAAGCACCTCCAGAAGGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTCCACTCGTGCAGGCTaGGAGTGCATAGCTATAGGT +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSTRAG*ECIAIG
Trigger: ACCTATAGCTATGCACTCCAAGCCTGCACGAGTGGA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACCAACATACATTCATTaGAGTGGCACTGACGGCCCA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLPTYIH*SGTDGP
Trigger: TGGGCCGTCAGTGCCACTCAAATGAATGTATGTTGG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCCTGGCCTGCAATTTaGGAGGTTCCATCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLPWPAI*EVPSLR
Trigger: CCTCAGGGATGGAACCTCCAAAATTGCAGGCCAGGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACCTTTGCTGCAACAGTaGAAGCAGGTGCAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLPLLQQ*KQVQAS
Trigger: AGAGGCCTGCACCTGCTTCAACTGTTGCAGCAAAGG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCAGACCGGGGAATTTaGGTATCGGCTAACCCCTCA +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPDRGI*VSANPS
Trigger: TGAGGGGTTAGCCGATACCAAAATTCCCCGGTCTGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674083.1
CDS TCA 90 bp TTTGCACTCACACTGCCCAGAGTGAGGATTGCAGAATTTGTTCACTaGGCCATGGAGGTTACACTGGCAGGGCTCACATCCAACATCATT +
Preference number: 5 (lower is better)
Translates to: FALTLPRVRIAEFVH*AMEVTLAGLTSNII
Trigger: AATGATGTTGGATGTGAGCCCTGCCAGTGTAACCTCCATGGCTCAGTGAACAAATTCTGCAATCCTCACTCTGGGCAGTGTGAGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp TTTCTCCTGCATGGTTTGCAGCCACAACACCAATGCGATATGTTGTaGATGGTTCTAACCCGTACAGGTGGGCTTGATGGCTTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: FLLHGLQPQHQCDML*MVLTRTGGLDGLFP
Trigger: AGGGAACAAGCCATCAAGCCCACCTGTACGGGTTAGAACCATTCACAACATATCGCATTGGTGTTGTGGCTGCAAACCATGCAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp ATCTTTCCATTTTGCACTGTGGGCGGTGACCAACATACATTCATTTaGGTGGCACTGACGGCCCAAAGATCTGGAGGGCTGACTTCTGAT +
Preference number: 5 (lower is better)
Translates to: IFPFCTVGGDQHTFI*VALTAQRSGGLTSD
Trigger: ATCAGAAGTCAGCCCTCCAGATCTTTGGGCCGTCAGTGCCACTCAAATGAATGTATGTTGGTCACCGCCCACAGTGCAAAATGGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp GATTGTACACCACTCCTTCTTCTCCACCACAACACTCTAAATCGTTaGTCACAATCTGTCTGCCACAGCACTTCTGGCCATGGCCATCAT +
Preference number: 5 (lower is better)
Translates to: DCTPLLLLHHNTLNR*SQSVCHSTSGHGHH
Trigger: ATGATGGCCATGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCAACGATTTAGAGTGTTGTGGTGGAGAAGAAGGAGTGGTGTACAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp CATAGAAACATAGGATATCACAGGTGGAGAGAGACCTTCTGGAGGTaGTTGCAATGTCCTCACCACATTCCAAGAGCTACAGGTATGCCC +
Preference number: 5 (lower is better)
Translates to: HRNIGYHRWRETFWR*LQCPHHIPRATGMP
Trigger: GGGCATACCTGTAGCTCTTGGAATGTGGTGAGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTATGTTTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp CTTGGAGGTTTCCAGGTGATTTCTATTGATTCTGAGCCTGTGACTTaGAATGTTGGAGAGTCCATGTTCTCTGGCAGGGCCTCCATTGTC +
Preference number: 5 (lower is better)
Translates to: LGGFQVISIDSEPVT*NVGESMFSGRASIV
Trigger: GACAATGGAGGCCCTGCCAGAGAACATGGACTCTCCAACATTGCAAGTCACAGGCTCAGAATCAATAGAAATCACCTGGAAACCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TCAGGAGGAAGGTGTCACTCCAGTTCACACACACCACAGACAAATTaGTGTCCACCGAAAATGGGGCTCGGTACTGAGGCAATTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SGGRCHSSSHTPQTN*CPPKMGLGTEAILF
Trigger: AAAAAGAATTGCCTCAGTACCGAGCCCCATTTTCGGTGGACAGCAATTTGTCTGTGGTGTGTGTGAACTGGAGTGACACCTTCCTCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp GAGATTCTGGCTTTGTCCAATTCAACAGAACTGAATGAGCACTCGTaGCTTGAGCCCAAGGAGCTGGAAAATCTTGAGGTGGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: EILALSNSTELNEHS*LEPKELENLEVELP
Trigger: TGGAAGCTCCACCTCAAGATTTTCCAGCTCCTTGGGCTCAAGCCACGAGTGCTCATTCAGTTCTGTTGAATTGGACAAAGCCAGAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp CCCTTGGCTGTTGCTGGCAGTTACTGTGTAGCTATACTCCACACCTaGGGTGAGAGTAAAATCACGATAGCGTGTTTCCAAGCCTGTATA +
Preference number: 5 (lower is better)
Translates to: PLAVAGSYCVAILHT*GESKITIACFQACI
Trigger: TATACAGGCTTGGAAACACGCTATCGTGATTTTACTCTCACCCCAGGTGTGGAGTATAGCTACACAGTAACTGCCAGCAACAGCCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp CCAGGAGTTGTTAGGACCAAGCCAAGTCCAGTAGAGGTATCATATTaGATCAACGGCGTCTTAACACTTCCTTCGTCAGTCGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: PGVVRTKPSPVEVSY*INGVLTLPSSVVQM
Trigger: CATCTGCACGACTGACGAAGGAAGTGTTAAGACGCCGTTGATCCAATATGATACCTCTACTGGACTTGGCTTGGTCCTAACAACTCCTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp CTTGCATTCCAGGGTTACGTCTTCTGGGTTTCCATCCTTTACAGGTaGGTGTCTGTGAATGTGGTGCGTTCCTTAGTCACTGAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: LAFQGYVFWVSILYR*VSVNVVRSLVTELK
Trigger: TTTCAGCTCAGTGACTAAGGAACGCACCACATTCACAGACACCCACCTGTAAAGGATGGAAACCCAGAAGACGTAACCCTGGAATGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGACCGCTGTCCCTCGTaGCCTGGCAACGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLDRCPS*PGNAAV
Trigger: TACAGCAGCGTTGCCAGGCAACGAGGGACAGCGGTC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGACGATGGAAACTTTCTaGAAAGCTCCCACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRTMETF*KAPTFS
Trigger: GGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGT...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATATATGGCTGGCTTGTaGTGTCGCAGTTATCGGCAT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLYMAGL*CRSYRH
Trigger: ATGCCGATAACTGCGACACAACAAGCCAGCCATATA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGTATATGGCTGGCTTGTaGTGTCGCAGTTATCGGCAT +
Preference number: 5 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRYMAGL*CRSYRH
Trigger: ATGCCGATAACTGCGACACAACAAGCCAGCCATATA...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGACGTTTGCTTTGCACTaGCACTGGCCTGAATTTTGG +
Preference number: 5 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRTFALH*HWPEFW
Trigger: CCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACGT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGAGCAATGGAAGCATCTaGGCAAACACACTGACCAGT +
Preference number: 5 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRSNGSI*ANTLTS
Trigger: ACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCT...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTCCTCTGGGCGGAGGTaGCTGGAATGGAGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: TGCILRISNSMRAFCKLISSGRR*LEWSFA
Trigger: AGCAAAACTCCATTCCAGCAACCTCCGCCCAGAGGA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTTAAGCTGCGGACTCTaGAGGGAGTTGGCACACTTT +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSLSCGL*RELAHF
Trigger: AAAGTGTGCCAACTCCCTCAAGAGTCCGCAGCTTAA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGAAGACCAGCTAACGTaGTCACAGTCACTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPEDQLT*SQSLLG
Trigger: GCCGAGAAGTGACTGTGACAACGTTAGCTGGTCTTC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACACTCGCAGTGAGATaGGCTCCTCTCTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPTLAVR*APLSGR
Trigger: TCTTCCAGAGAGAGGAGCCAATCTCACTGCGAGTGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGCACTGATGATTTGGTaGTGCCTCCTGTATTCGGCC +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPALMIW*CLLYSA
Trigger: GGCCGAATACAGGAGGCACAACCAAATCATCAGTGC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCTAGAAAAGGCTCGCTaGAAGTGCACCCAGCAGATG +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLEKAR*KCTQQM
Trigger: CATCTGCTGGGTGCACTTCAAGCGAGCCTTTTCTAG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTTTCTCCTGCATGGTTaGCAGCCACAACACCAATGC +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSFLLHG*QPQHQC
Trigger: GCATTGGTGTTGTGGCTGCAAACCATGCAGGAGAAA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCCCTGGCCTGCAATTTaGGAGGTTCCATCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLPWPAI*EVPSLR
Trigger: CCTCAGGGATGGAACCTCCAAAATTGCAGGCCAGGG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCAGGGGCACTGATGTaGACCACTGCTTGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLPGALM*TTAWVE
Trigger: TTCTACCCAAGCAGTGGTCAACATCAGTGCCCCTGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGACTGACGATCCCGTaGGGCTTCCCAGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRLTIP*GFPGAL
Trigger: CAGTGCCCCTGGGAAGCCCAACGGGATCGTCAGTCT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGTACTTTGTTTCTATTaGGCTGGGAGTACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLVLCFY*AGSTGE
Trigger: CTCCCCTGTACTCCCAGCCAAATAGAAACAAAGTAC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAACATACAGTCCACTGTaGTGGCCCATGATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLTYSPL*WPMMAS
Trigger: GGAAGCCATCATGGGCCACAACAGTGGACTGTATGT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTACTGAGCTGAAATCCTaGATGGCGTTCATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSTELKS*MAFIRS
Trigger: GGACCTGATGAACGCCATCAAGGATTTCAGCTCAGT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GCCCACGCCACTTGCCAGCAATACTTTGAAGCAGGGTACTTTAAGTaGTGTTGCGATACTCCATTTTCTGGAAACTGCAGACACGTTCTC +
Preference number: 5 (lower is better)
Translates to: AHATCQQYFEAGYFK*CCDTPFSGNCRHVL
Trigger: GAGAACGTGTCTGCAGTTTCCAGAAAATGGAGTATCGCAACATCACTTAAAGTACCCTGCTTCAAAGTATTGCTGGCAAGTGGCGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp GAAACACTGGCCTGTGACCAAGTGACAGGTTTCATTCAAGGCTCCTaGGAGATGACAATTACAAGGCTGACATCTTCCAGTCTGAGGATC +
Preference number: 5 (lower is better)
Translates to: ETLACDQVTGFIQGS*EMTITRLTSSSLRI
Trigger: GATCCTCAGACTGGAAGATGTCAGCCTTGTAATTGTCATCTCTCAGGAGCCTTGAATGAAACCTGTCACTTGGTCACAGGCCAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp TGGAGCTGCTCCTGTTGTACGTCCTCGACTCCAATCACTATATACTaGACCTCCTTCATGCGAGGCTATCACTCGATACAGGTATTCTGT +
Preference number: 5 (lower is better)
Translates to: WSCSCCTSSTPITIY*TSFMRGYHSIQVFC
Trigger: ACAGAATACCTGTATCGAGTGATAGCCTCGCATGAAGGAGGTTCAGTATATAGTGATTGGAGTCGAGGACGTACAACAGGAGCAGCTCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GTCCATGGGCTAAGAGCAGAAGTCTTGTCAATAAACCTCATGGAATaGCTCCTCGGGAGAGTCACCAGGGTAGTAACTTCTTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VHGLRAEVLSINLME*LLGRVTRVVTSSFP
Trigger: AGGAAAGGAAGAAGTTACTACCCTGGTGACTCTCCCGAGGAGTCATTCCATGAGGTTTATTGACAAGACTTCTGCTCTTAGCCCATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp ATTCTGCCACAGCAGGAATCACCAATGCCAACAGAAACCCGATTGTaGTGTTCATCTGGACAGCATACTTCACCTGGTAGAATTCTAGCG +
Preference number: 5 (lower is better)
Translates to: ILPQQESPMPTETRL*CSSGQHTSPGRILA
Trigger: CGCTAGAATTCTACCAGGTGAAGTATGCTGTCCAGATGAACAGCACAATCGGGTTTCTGTTGGCATTGGTGATTCCTGCTGTGGCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp AATACTTTCAGCAGCAGCAGAGCTGTGACAAAAAGTGCTTCGGTCTaGGAGTCCACATACTGCTTGGGTTGGCACGATGGAAACTTTCTT +
Preference number: 5 (lower is better)
Translates to: NTFSSSRAVTKSASV*ESTYCLGWHDGNFL
Trigger: AAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCTCTGCTGCTGCTGAAAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp TGTGTTAAGAGTCCATTAGGGCGAAAAGGTGCTTCCCACCTCACGTaGGCTTTCCGGGATCCCTGTGTTTTGACAAACACATTTACTGTT +
Preference number: 5 (lower is better)
Translates to: CVKSPLGRKGASHLT*AFRDPCVLTNTFTV
Trigger: AACAGTAAATGTGTTTGTCAAAACACAGGGATCCCGGAAAGCCCACGTGAGGTGGGAAGCACCTTTTCGCCCTAATGGACTCTTAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATGCTGGAAGGAAGACTaGGGTGCCCAGGTAAAGTAT +
Preference number: 5 (lower is better)
Translates to: FGVSVTGCILRISNSMRACWKED*GAQVKY
Trigger: ATACTTTACCTGGGCACCCAAGTCTTCCTTCCAGCA...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTGAGTCCACATACTGCTaGGGTTGGCACGATGGAAAC +
Preference number: 5 (lower is better)
Translates to: TGCILRISNSMRAFCKLIESTYC*GWHDGN
Trigger: GTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTC...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGACACATTACACCTTGTaGCTCAGGTTTCAGCCATAC +
Preference number: 5 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRTHYTL*LRFQPY
Trigger: GTATGGCTGAAACCTGAGCAACAAGGTGTAATGTGT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAATTGAAAGCGTAAACTaGATCACCTTGGCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLIESVN*ITLAER
Trigger: CCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAAT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCACCTTTGGCTTCTTTTTaGCACTCACACTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: FGVSVTGCILRISNSMRAPLASF*HSHCPE
Trigger: CTCTGGGCAGTGTGAGTGCAAAAAAGAAGCCAAAGG...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCTTTGGCTTCTTTTTaGCACTCACACTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPLASF*HSHCPE
Trigger: CTCTGGGCAGTGTGAGTGCAAAAAAGAAGCCAAAGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTTGTCTCCCTTCAACATaGGGCTTGCAGATGCACTGC +
Preference number: 5 (lower is better)
Translates to: TGCILRISNSMRAFCKLICLPST*GLQMHC
Trigger: GCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGACA...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCCCTCCAAACATTTATaGCACTGTCTCCCTTCAACA +
Preference number: 5 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRPSKHL*HCLPST
Trigger: TGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGGG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACCCTCCAAACATTTATaGCACTGTCTCCCTTCAACA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLPSKHL*HCLPST
Trigger: TGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGGG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGCCTGTTACCCCTAATTaGCAAGGACATTGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRPVTPN*QGHCPV
Trigger: AACAGGACAATGTCCTTGCAAATTAGGGGTAACAGG...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGATTACACCTTCTTCCTaGACGATTAGGCACACACAG +
Preference number: 5 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRITPSS*TIRHTQ
Trigger: CTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAAT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACAACCCAATAGATTGTaGACATCCAAGTGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLQPNRL*TSKWLA
Trigger: TGCAAGCCACTTGGATGTCAACAATCTATTGGGTTG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAGAAGAACTTTGAACTaGTCCTCTGGGCGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPRRTLN*SSGRRL
Trigger: CAACCTCCGCCCAGAGGACAAGTTCAAAGTTCTTCT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGATAGCAGAAGAACTTaGAACTTGTCCTCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPDSRRT*NLSSGR
Trigger: CCGCCCAGAGGACAAGTTCAAAGTTCTTCTGCTATC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCACAGCTACACTCCTTGTaGAACCATGCACATTGGTGG +
Preference number: 5 (lower is better)
Translates to: FGVSVTGCILRISNSMRAQLHSL*NHAHWW
Trigger: CCACCAATGTGCATGGTTCAACAAGGAGTGTAGCTG...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACAGCTACACTCCTTGTaGAACCATGCACATTGGTGG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLQLHSL*NHAHWW
Trigger: CCACCAATGTGCATGGTTCAACAAGGAGTGTAGCTG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCAACCACCGAAACCTaGTTCCAAACACAAATGTTG +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLATTET*FQTQML
Trigger: CAACATTTGTGTTTGGAACAAGGTTTCGGTGGTTGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGTGGAGCTGCTCCTGTaGTACGTCCTCGACTCCAAT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLVELLL*YVLDSN
Trigger: ATTGGAGTCGAGGACGTACAACAGGAGCAGCTCCAC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTGGTGGCTGAACCTCTaGTGGGGCTTCTTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLWWLNL*WGFLWS
Trigger: ACTCCACAAGAAGCCCCACAAGAGGTTCAGCCACCA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCCCAGAGCACAACCTTaGGCCGTGCATGCTTGGACT +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTPRAQP*AVHAWT
Trigger: AGTCCAAGCATGCACGGCCAAAGGTTGTGCTCTGGG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGACCTCATCTGGAGTaGGTATCTGGGAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRPHLE*VSGRAR
Trigger: CCTGGCTCTCCCAGATACCAACTCCAGATGAGGTCT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCCCAAGCACTGCTGTTaGTGCCTCCATGAAGAGTGC +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLPKHCC*CLHEEC
Trigger: GCACTCTTCATGGAGGCACAAACAGCAGTGCTTGGG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCTCTCCGGAACTCCTaGGGTAGTAGCTGCAACTAC +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLALRNS*GSSCNY
Trigger: GTAGTTGCAGCTACTACCCAAGGAGTTCCGGAGAGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACGACTCAATTGATATaGAGAAACGAGGCCATTGGG +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTTQLI*RNEAIG
Trigger: CCCAATGGCCTCGTTTCTCAATATCAATTGAGTCGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAACACTGCGTCCATGGTaGCAAACCTGTGTCATTATA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLTLRPW*QTCVII
Trigger: TATAATGACACAGGTTTGCAACCATGGACGCAGTGT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGTGATGCTGGTGGGTTaGCTGGTGGAGCATCCTCCA +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTVMLVG*LVEHPP
Trigger: TGGAGGATGCTCCACCAGCAAACCCACCAGCATCAC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCAACATACATTCATTaGAGTGGCACTGACGGCCCA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPPTYIH*SGTDGP
Trigger: TGGGCCGTCAGTGCCACTCAAATGAATGTATGTTGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCAGGGTGGTGCACGCTaGAATTCGTATTTCATACCT +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSQGGAR*NSYFIP
Trigger: AGGTATGAAATACGAATTCAAGCGTGCACCACCCTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACAAAACTTTTCCATTaGGCTGCAGCGGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPTKLFH*AAAVLS
Trigger: GGACAGGACCGCTGCAGCCAAATGGAAAAGTTTTGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCAGCCCCGTGTACTTaGTTTCTATTTGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLPAPCT*FLFGWE
Trigger: CTCCCAGCCAAATAGAAACAAAGTACACGGGGCTGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACACATGCACTCCGGTaGCTGCGGATACTCACAGGT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTHALR*LRILTG
Trigger: ACCTGTGAGTATCCGCAGCAACCGGAGTGCATGTGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACTGAGCTGAAATCCTaGATGGCGTTCATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPTELKS*MAFIRS
Trigger: GGACCTGATGAACGCCATCAAGGATTTCAGCTCAGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAAATGGGTGCAGACCTaGCATTCCAGGGTTACGTCT +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQKWVQT*HSRVTS
Trigger: AGACGTAACCCTGGAATGCAAGGTCTGCACCCATTT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACACAATCTTTTACTGTaGGGCCCTGGGGTAATACAT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLHNLLL*GPGVIH
Trigger: ATGTATTACCCCAGGGCCCAACAGTAAAAGATTGTG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAAGGTGGACACAGCCTaGGTTAATGCTTATTTGTGC +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLKVDTA*VNAYLC
Trigger: GCACAAATAAGCATTAACCAAGGCTGTGTCCACCTT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp ATCACACCTAAGCCCAATAACGTTTGCTTTGCACTTGCACTGGCCTaGATTTTGGTGACAGGTAATATCTCCATCCACTGTCCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: ITPKPNNVCFALALA*ILVTGNISIHCPRG
Trigger: ACCTCTGGGACAGTGGATGGAGATATTACCTGTCACCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACGTTATTGGGCTTAGGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp GTTGACATCCAAGTGGCTTGCACTGGGAACACAAGCATCACACTTTaGGCCAGTGACAAATTGTTTACAGAAACACTGGCCTGTGACCAA +
Preference number: 5 (lower is better)
Translates to: VDIQVACTGNTSITL*ASDKLFTETLACDQ
Trigger: TTGGTCACAGGCCAGTGTTTCTGTAAACAATTTGTCACTGGCTCAAAGTGTGATGCTTGTGTTCCCAGTGCAAGCCACTTGGATGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp AGAAAAATCGTACTTGGCAAATGGAACCAGATTCCAGATGGTAGCTaGGGTTTCATGACCTTCGTAGGAAACACATGGCTGACCACCAGC +
Preference number: 5 (lower is better)
Translates to: RKIVLGKWNQIPDGS*GFMTFVGNTWLTTS
Trigger: GCTGGTGGTCAGCCATGTGTTTCCTACGAAGGTCATGAAACCTCAGCTACCATCTGGAATCTGGTTCCATTTGCCAAGTACGATTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp CCCATTGGATTTTCTAGGATGCTGCCAGGTGACCAACATCATTCTTaGCTTCACATCCAGAAGAATCGGAGGAACTACAGGTCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: PIGFSRMLPGDQHHS*LHIQKNRRNYRSRF
Trigger: AAACCTGGACCTGTAGTTCCTCCGATTCTTCTGGATGTGAAGTCAAGAATGATGTTGGTCACCTGGCAGCATCCTAGAAAATCCAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GGTCTTGTGGTAACTTCTACCCAAGCACTGCTGTTTGTGCCTCCATaGAGAGTGCTCATCAGTACCCGATATTCATATTTTGTCCATGGG +
Preference number: 5 (lower is better)
Translates to: GLVVTSTQALLFVPP*RVLISTRYSYFVHG
Trigger: CCCATGGACAAAATATGAATATCGGGTACTGATGAGCACTCTTCATGGAGGCACAAACAGCAGTGCTTGGGTAGAAGTTACCACAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GATAATGCCATTGGGAGATTCTGGCTTTGTCCAATTCAACAGAACTaGATGAGCACTCGTGGCTTGAGCCCAAGGAGCTGGAAAATCTTG +
Preference number: 5 (lower is better)
Translates to: DNAIGRFWLCPIQQN*MSTRGLSPRSWKIL
Trigger: CAAGATTTTCCAGCTCCTTGGGCTCAAGCCACGAGTGCTCATTCAGTTCTGTTGAATTGGACAAAGCCAGAATCTCCCAATGGCATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp CATCAAAGGTGCAATCTCAGGGGTCTGTATGAATGTCCAGTCACTTaGTGCACATCCCAGGGTGGTGCACGCTTGAATTCGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: HQRCNLRGLYECPVT*CTSQGGARLNSYFI
Trigger: TATGAAATACGAATTCAAGCGTGCACCACCCTGGGATGTGCATCAAGTGACTGGACATTCATACAGACCCCTGAGATTGCACCTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp CAGGATCCAACTCTTGTAGATTGTAGAATCCATTCTGGCACTGATTaGACTGCCTGCCAGACACGTGTCTCTTACAATTACACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: QDPTLVDCRIHSGTD*TACQTRVSYNYTVL
Trigger: GAGGACAGTGTAATTGTAAGAGACACGTGTCTGGCAGGCAGTGCAATCAGTGCCAGAATGGATTCTACAATCTACAAGAGTTGGATCCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp TCCAGGTTTGTCCTCTGCGGTCATGAATGGAATCCAAGAACTATGTaGACTGCCAAATCCATTGGAGGCAACCAACCGAAACATATACTC +
Preference number: 5 (lower is better)
Translates to: SRFVLCGHEWNPRTM*TAKSIGGNQPKHIL
Trigger: GAGTATATGTTTCGGTTGGTTGCCTCCAATGGATTTGGCAGTGCACATAGTTCTTGGATTCCATTCATGACCGCAGAGGACAAACCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp TGGAATGGAGTTTTGCTGCAACCCAATAGATTGTTGACATCCAAGTaGCTTGCACTGGGAACACAAGCATCACACTTTGAGCCAGTGACA +
Preference number: 5 (lower is better)
Translates to: WNGVLLQPNRLLTSK*LALGTQASHFEPVT
Trigger: TGTCACTGGCTCAAAGTGTGATGCTTGTGTTCCCAGTGCAAGCCACTTGGATGTCAACAATCTATTGGGTTGCAGCAAAACTCCATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp ATAGGAGAGGGTCCATTCAGTTCTTCAGGTGGAAACCACCTAAGATaGATTGTTGTGCTGTTGATTCCTTTAACCAGAGGTGGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: IGEGPFSSSGGNHLR*IVVLLIPLTRGGLS
Trigger: ACTGAGGCCACCTCTGGTTAAAGGAATCAACAGCACAACAATCCATCTTAGGTGGTTTCCACCTGAAGAACTGAATGGACCCTCTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACTTGCCAGCAATACTTaGAAGCAGGGTACTTTAAGT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLASNT*KQGTLS
Trigger: ACTTAAAGTACCCTGCTTCAAAGTATTGCTGGCAAG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGCTTGCCAGCAATACTTaGAAGCAGGGTACTTTAAGT +
Preference number: 5 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRLASNT*KQGTLS
Trigger: ACTTAAAGTACCCTGCTTCAAAGTATTGCTGGCAAG...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACGATGGAAACTTTCTaGAAAGCTCCCACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPTMETF*KAPTFS
Trigger: GGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCACATACTGCTTGGGTaGGCACGATGGAAACTTTCT +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPHILLG*ARWKLS
Trigger: AGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGAGTCCACATACTGCTaGGGTTGGCACGATGGAAAC +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLESTYC*GWHDGN
Trigger: GTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGGATGCAGATCATTCTaGTCTGGTGTGATGCAGCTA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPGCRSF*SGVMQL
Trigger: TAGCTGCATCACACCAGACAAGAATGATCTGCATCC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTACACATTACACCTTGTaGCTCAGGTTTCAGCCATAC +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSTHYTL*LRFQPY
Trigger: GTATGGCTGAAACCTGAGCAACAAGGTGTAATGTGT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTATCCAGGACGATAATTaGGTCCAGGTGTCAGGATGC +
Preference number: 5 (lower is better)
Translates to: TGCILRISNSMRAFCKLIIQDDN*VQVSGC
Trigger: GCATCCTGACACCTGGACCAAATTATCGTCCTGGAT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATCCAGGACGATAATTaGGTCCAGGTGTCAGGATGC +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLIQDDN*VQVSGC
Trigger: GCATCCTGACACCTGGACCAAATTATCGTCCTGGAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCACAGTCACAGGGTTaGCAAACATCTATGGCCGAA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLSQSQG*QTSMAE
Trigger: TTCGGCCATAGATGTTTGCAAACCCTGTGACTGTGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCAATAACGTTTGCTTaGCACTTGCACTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPITFA*HLHWPE
Trigger: TTCAGGCCAGTGCAAGTGCAAAGCAAACGTTATTGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGCATTGGTCACAACGTaGCCCAGCAATGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLALVTT*PSNGSI
Trigger: GATGCTTCCATTGCTGGGCAACGTTGTGACCAATGC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCCTCTGGGCGGAGGTaGCTGGAATGGAGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSSGRR*LEWSFA
Trigger: AGCAAAACTCCATTCCAGCAACCTCCGCCCAGAGGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATTCTCCCAGGAGATATaGAGAGAGTACGAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLFSQEI*REYEER
Trigger: CCTCTCTTCGTACTCTCTCAATATCTCCTGGGAGAA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGCCCACAAAACCTTTTaGGATTATCTCAGGATCCTT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLAHKTF*DYLRIL
Trigger: AAGGATCCTGAGATAATCCAAAAAGGTTTTGTGGGC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAGGCATCCATCCAGATaGACTCTGACAGCACCGCTG +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPRHPSR*TLTAPL
Trigger: CAGCGGTGCTGTCAGAGTCAATCTGGATGGATGCCT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGACTCTTGAGGGAGTaGGCACACTTTGTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGLLRE*AHFVEL
Trigger: CAGCTCCACAAAGTGTGCCAACTCCCTCAAGAGTCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGTGAGGTTGCTTGTATaGACAAATTCAGCACTGGCA +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSVRLLV*TNSALA
Trigger: TGCCAGTGCTGAATTTGTCAATACAAGCAACCTCAC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACTCTTGTGGGGCTTCTaGTGGAGTAGAGATGTTCAA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLLLWGF*WSRDVQ
Trigger: TTGAACATCTCTACTCCACAAGAAGCCCCACAAGAG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGGACCCAGGAACTGTTaGTACAGCCCACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPGPRNC*YSPHVC
Trigger: GCACACATGTGGGCTGTACAAACAGTTCCTGGGTCC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAGAACAGCTCTGGACTaGGGATCCCTTCCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVRTALD*GSLPVP
Trigger: GGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGTAATTTGGGTTCCATaGCTTTTCACGCAGGCATAT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLVIWVP*LFTQAY
Trigger: ATATGCCTGCGTGAAAAGCAATGGAACCCAAATTAC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGTGTTGGTATATCACTaGGAGTGTCTTCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQVLVYH*ECLPQW
Trigger: CCACTGTGGAAGACACTCCAAGTGATATACCAACAC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTCACGAATTGTGGGTGTaGGTATATCACTTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSHELWV*VYHLEC
Trigger: ACACTCCAAGTGATATACCAACACCCACAATTCGTG...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCAACAGAAACCCGATaGTGCTGTTCATCTGGACAG +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLPTETR*CCSSGQ
Trigger: CTGTCCAGATGAACAGCACAATCGGGTTTCTGTTGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCTCTCCACTGAACCCTaGGAGTTACAGGCTCTGACC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLSTEP*ELQALT
Trigger: GGTCAGAGCCTGTAACTCCAAGGGTTCAGTGGAGAG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTGGGAGATAATGCCATaGGGAGATTCTGGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQWEIMP*GDSGFV
Trigger: GACAAAGCCAGAATCTCCCAATGGCATTATCTCCCA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGAGCATTTCATTCCTTaGAAGCCTATAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLEHFIP*KPIGLD
Trigger: ATCCAGTCCTATAGGCTTCAAAGGAATGAAATGCTC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCCACTCGTGCAGGCTaGGAGTGCATAGCTATAGGT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSTRAG*ECIAIG
Trigger: ACCTATAGCTATGCACTCCAAGCCTGCACGAGTGGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCCTCCTGGAGCCATTaGTACCTCCAGATGTGGAGG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSSWSH*YLQMWR
Trigger: CCTCCACATCTGGAGGTACAAATGGCTCCAGGAGGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACAAAAGAGAAACAGTaGGCTGGAATCCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPTKEKQ*AGILLE
Trigger: CTCCAGGAGGATTCCAGCCAACTGTTTCTCTTTTGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGATGTTGACCACTGCTaGGGTAGAAGAGATCACATG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLDVDHC*GRRDHM
Trigger: CATGTGATCTCTTCTACCCAAGCAGTGGTCAACATC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGATGTTGACCACTGCTaGGGTAGAAGAGATCACATG +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQDVDHC*GRRDHM
Trigger: CATGTGATCTCTTCTACCCAAGCAGTGGTCAACATC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCACGTACTCCTTCAGTaGGCCGTTCAGGAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPHVLLQ*AVQEEG
Trigger: ACCTTCCTCCTGAACGGCCAACTGAAGGAGTACGTG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATGGAAAAAGAAGGTTTaGTCCGCCGTTCTCGGTATG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLWKKKV*SAVLGM
Trigger: CATACCGAGAACGGCGGACAAAACCTTCTTTTTCCA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAGTAGAGGTATCATATaGGATCAACGGCGTCTTAAC +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLSRGII*DQRRLN
Trigger: GTTAAGACGCCGTTGATCCAATATGATACCTCTACT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTTACTGGCCTGTGCTTTaGACACTTATGGTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSYWPVL*TLMVGK
Trigger: TTTGCCAACCATAAGTGTCAAAAGCACAGGCCAGTA...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAAGGTGGACACAGCCTaGGTTAATGCTTATTTGTGC +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSKVDTA*VNAYLC
Trigger: GCACAAATAAGCATTAACCAAGGCTGTGTCCACCTT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGCGAGTCTGCATGGTTaGTATAATAGAGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPASLHG*YNRGLA
Trigger: TGCCAAGCCTCTATTATACAAACCATGCAGACTCGC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp AGCCCAATAACGTTTGCTTTGCACTTGCACTGGCCTGAATTTTGGTaGCAGGTAATATCTCCATCCACTGTCCCAGAGGTATTGCAGTTA +
Preference number: 5 (lower is better)
Translates to: SPITFALHLHWPEFW*QVISPSTVPEVLQL
Trigger: TAACTGCAATACCTCTGGGACAGTGGATGGAGATATTACCTGTCACCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACGTTATTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp GTTCGAAAGCTGGCCTTAATGCCAGTGAAGTCTGTATTGACTGGGTaGGTGGAGCTGGGAAATTTACAATACCCATTTCCTATGAAACGG +
Preference number: 5 (lower is better)
Translates to: VRKLALMPVKSVLTG*VELGNLQYPFPMKR
Trigger: CCGTTTCATAGGAAATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAGTCAATACAGACTTCACTGGCATTAAGGCCAGCTTTCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TGTATCACAGTCACAGGGTTTGCAAACATCTATGGCCGAAGGATCTaGACCAACTTGTCGGAAAAAGTAATCCTTGCACAGCTCACAGTT +
Preference number: 5 (lower is better)
Translates to: CITVTGFANIYGRRI*TNLSEKVILAQLTV
Trigger: AACTGTGAGCTGTGCAAGGATTACTTTTTCCGACAAGTTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAACCCTGTGACTGTGATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp TGTGAGGCTCACACTGATTACAGCGAAGACCTGTTACCCCTAATTTaGAAGGACATTGTCCTGTTGATTTGTTACACAGCAGAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: CEAHTDYSEDLLPLI*KDIVLLICYTAESH
Trigger: ATGGCTCTCTGCTGTGTAACAAATCAACAGGACAATGTCCTTGCAAATTAGGGGTAACAGGTCTTCGCTGTAATCAGTGTGAGCCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp GCTGACATCTTCCAGTCTGAGGATCAAATCCAAAGTAATGGTCTTTaGATTGGTCACAACGTTGCCCAGCAATGGAAGCATCTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: ADIFQSEDQIQSNGL*IGHNVAQQWKHLGK
Trigger: TTTGCCAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCATTACTTTGGATTTGATCCTCAGACTGGAAGATGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp GTTGTACGTCCTCGACTCCAATCACTATATACTGAACCTCCTTCATaGGAGGCTATCACTCGATACAGGTATTCTGTAAAAGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: VVRPRLQSLYTEPPS*EAITRYRYSVKGWR
Trigger: TCTCCAGCCTTTTACAGAATACCTGTATCGAGTGATAGCCTCGCATGAAGGAGGTTCAGTATATAGTGATTGGAGTCGAGGACGTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp ATCCAAAGTAATGGTCTTTGCATTGGTCACAACGTTGCCCAGCAATaGAAGCATCTTGGCAAACACACTGACCAGTCAGGCTATTACAGA +
Preference number: 5 (lower is better)
Translates to: IQSNGLCIGHNVAQQ*KHLGKHTDQSGYYR
Trigger: TCTGTAATAGCCTGACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCATTACTTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp CTCGAAGCATCTGCGAATCACTTCATAGCGAATTATTTTTCCATTTaGGTTAACAGGCTCAGACCAGCTCAGCTCAACACTGGTGGACTT +
Preference number: 5 (lower is better)
Translates to: LEASANHFIANYFSI*VNRLRPAQLNTGGL
Trigger: AAGTCCACCAGTGTTGAGCTGAGCTGGTCTGAGCCTGTTAACCCAAATGGAAAAATAATTCGCTATGAAGTGATTCGCAGATGCTTCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCCACGTTCTCCAGCCTaGGGAAAAGACCTCGTGACT +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLPRSPA*GKDLVT
Trigger: AGTCACGAGGTCTTTTCCCAAGGCTGGAGAACGTGG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCACATACTGCTTGGGTaGGCACGATGGAAACTTTCT +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLHILLG*ARWKLS
Trigger: AGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCACATACTGCTTGGGTaGGCACGATGGAAACTTTCT +
Preference number: 5 (lower is better)
Translates to: TGCILRISNSMRAFCKLIHILLG*ARWKLS
Trigger: AGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTATAAAACTTGCAGAATaGCTATGGGCGTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSIKLAE*LWALGC
Trigger: GCATCCTAACGCCCATAGCAATTCTGCAAGTTTTAT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACCTTATTTCCGTTGGTaGTGGACTAAAGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLPYFRW*WTKELN
Trigger: ATTCAGTTCTTTAGTCCACAACCAACGGAAATAAGG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGAGGTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGCCTTATTTCCGTTGGTaGTGGACTAAAGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: TEVMGLPKYCGTSKARRRPYFRW*WTKELN
Trigger: ATTCAGTTCTTTAGTCCACAACCAACGGAAATAAGG...CCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGACCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGGCTTTTACGAACTCTaGAAGAGATGGGGTATTATA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLGFYEL*KRWGII
Trigger: TATAATACCCCATCTCTTCAAGAGTTCGTAAAAGCC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGATCTATATGGCTGGCTaGTTGTGTCGCAGTTATCGG +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLIYMAG*LCRSYR
Trigger: CCGATAACTGCGACACAACAAGCCAGCCATATAGAT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTAAACTTGATCACCTaGGCGGAAAGGCTTGTCATT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLVNLIT*AERLVI
Trigger: AATGACAAGCCTTTCCGCCAAGGTGATCAAGTTTAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATTGAAAGCGTAAACTaGATCACCTTGGCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLIESVN*ITLAER
Trigger: CCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGACGTTTGCTTTGCACTaGCACTGGCCTGAATTTTGG +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLTFALH*HWPEFW
Trigger: CCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACGT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTCCAATAACGTTTGCTTaGCACTTGCACTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: TGCILRISNSMRAFCKLIPITFA*HLHWPE
Trigger: TTCAGGCCAGTGCAAGTGCAAAGCAAACGTTATTGG...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCCTTTGGCTTCTTTTTaGCACTCACACTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLPLASF*HSHCPE
Trigger: CTCTGGGCAGTGTGAGTGCAAAAAAGAAGCCAAAGG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCGCAGAGAGCCATTTATaGTCCCAGTCTTATCACAGT +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPAESHL*SQSYHS
Trigger: ACTGTGATAAGACTGGGACAATAAATGGCTCTCTGC...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAGCAGAGAGCCATTTATaGTCCCAGTCTTATCACAGT +
Preference number: 5 (lower is better)
Translates to: FGVSVTGCILRISNSMRAAESHL*SQSYHS
Trigger: ACTGTGATAAGACTGGGACAATAAATGGCTCTCTGC...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCATTGTCCTGTTGATTaGTTACACAGCAGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPHCPVD*LHSREP
Trigger: TGGCTCTCTGCTGTGTAACAAATCAACAGGACAATG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCATTGTCCTGTTGATTaGTTACACAGCAGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQHCPVD*LHSREP
Trigger: TGGCTCTCTGCTGTGTAACAAATCAACAGGACAATG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGCCTGTTACCCCTAATTaGCAAGGACATTGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQPVTPN*QGHCPV
Trigger: AACAGGACAATGTCCTTGCAAATTAGGGGTAACAGG...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAGCATTGGTCACAACGTaGCCCAGCAATGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQALVTT*PSNGSI
Trigger: GATGCTTCCATTGCTGGGCAACGTTGTGACCAATGC...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACAACCCAATAGATTGTaGACATCCAAGTGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLQPNRL*TSKWLA
Trigger: TGCAAGCCACTTGGATGTCAACAATCTATTGGGTTG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTACTGCAACCCAATAGATaGTTGACATCCAAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLLQPNR*LTSKWL
Trigger: AAGCCACTTGGATGTCAACAATCTATTGGGTTGCAG...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATGCTGGAATGGAGTTTaGCTGCAACCCAATAGATTG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLCWNGV*LQPNRL
Trigger: CAATCTATTGGGTTGCAGCAAAACTCCATTCCAGCA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCAGCTACACTCCTTGTaGAACCATGCACATTGGTGG +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLQLHSL*NHAHWW
Trigger: CCACCAATGTGCATGGTTCAACAAGGAGTGTAGCTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGACTCTGAACTCATACTaGGTGTATGGCTCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLTLNSY*VYGSKP
Trigger: TGGCTTGGAGCCATACACCAAGTATGAGTTCAGAGT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTACTCTGAACTCATACTaGGTGTATGGCTCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: TGCILRISNSMRAFCKLITLNSY*VYGSKP
Trigger: TGGCTTGGAGCCATACACCAAGTATGAGTTCAGAGT...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGTTATACACGTTGATTaGTTCTTCAGAACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLVIHVD*FFRTLP
Trigger: TGGCAGAGTTCTGAAGAACAAATCAACGTGTATAAC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTACAGCTGTTATACACGTaGATTTGTTCTTCAGAACTC +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLQLLYT*ICSSEL
Trigger: GAGTTCTGAAGAACAAATCAACGTGTATAACAGCTG...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGAATATGAGTGGGCTTaGGGGGCTGGCACGCCTTCG +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSEYEWA*GAGTPS
Trigger: CGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATTC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGAACAGCTCTGGACTaGGGATCCCTTCCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSRTALD*GSLPVP
Trigger: GGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGAAGACCAGCTAACGTaGTCACAGTCACTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTEDQLT*SQSLLG
Trigger: GCCGAGAAGTGACTGTGACAACGTTAGCTGGTCTTC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTCACGCAGGCATATATaGTGCAGACTTCAACCTGAA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPSRRHI*CRLQPE
Trigger: TTCAGGTTGAAGTCTGCACAATATATGCCTGCGTGA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGATAGATTCAGGTTTTaGACACCTCACTGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLDRFRF*TPHCLA
Trigger: TGCAAGGCAGTGAGGTGTCAAAAACCTGAATCTATC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAACACATTTCTTCAATaGATGCCTTCCCTGTGGAAT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLNTFLQ*MPSLWN
Trigger: ATTCCACAGGGAAGGCATCAATTGAAGAAATGTGTT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTCAAGATTGTCTATTTaGGTCCACGTAGGGGGACTC +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLSRLSI*VHVGGL
Trigger: GAGTCCCCCTACGTGGACCAAAATAGACAATCTTGA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACGACTCAATTGATATaGAGAAACGAGGCCATTGGG +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPTTQLI*RNEAIG
Trigger: CCCAATGGCCTCGTTTCTCAATATCAATTGAGTCGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCTCGTCGGCCTGGATaGTCTGATTTCCCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSRRPG*SDFPKL
Trigger: AAGCTTGGGGAAATCAGACAATCCAGGCCGACGAGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACACTGCGTCCATGGTaGCAAACCTGTGTCATTATA +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTLRPW*QTCVII
Trigger: TATAATGACACAGGTTTGCAACCATGGACGCAGTGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGGGCTGGTTCGATCTTaGACAAGAGGACTCAAAATA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLGLVRS*TRGLKI
Trigger: TATTTTGAGTCCTCTTGTCAAAGATCGAACCAGCCC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCAGATGTGGAGGGGGTaGCATCAAAGGTGCAATCTC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTQMWRG*HQRCNL
Trigger: GAGATTGCACCTTTGATGCAACCCCCTCCACATCTG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCACACCACAGACAAATaGCTGTCCACCGAAAATGGG +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLHTTDK*LSTENG
Trigger: CCCATTTTCGGTGGACAGCAATTTGTCTGTGGTGTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCCAGACCGGGGAATTTaGGTATCGGCTAACCCCATA +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPPDRGI*VSANPI
Trigger: TATGGGGTTAGCCGATACCAAAATTCCCCGGTCTGG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000307340.8
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGCTTCCCACAGTGAGTaGTCCATCAAGACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLASHSE*SIKTFL
Trigger: CAAGAAAGTCTTGATGGACAACTCACTGTGGGAAGC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTACTGGCCTGTGCTTTaGACACTTATGGTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPYWPVL*TLMVGK
Trigger: TTTGCCAACCATAAGTGTCAAAAGCACAGGCCAGTA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGCGAGTCTGCATGGTTaGTATAATAGAGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLASLHG*YNRGLA
Trigger: TGCCAAGCCTCTATTATACAAACCATGCAGACTCGC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTATGATTTCTTCCAGATaGTGGAACATCAGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSMISSR*WNISGS
Trigger: AGACCCACTGATGTTCCACAATCTGGAAGAAATCAT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAATGTGGCATGTACAATaGGTAAAATGTGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLMWHVQ*VKCESG
Trigger: TCCTGACTCACATTTTACCAATTGTACATGCCACAT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp TTGCAATGTCCTCACCACATTCCAAGAGCTACAGGTATGCCCAGCTaGATTCCAAGTGTAGATTTTATATTCACACTGCGTCCATGGTTG +
Preference number: 5 (lower is better)
Translates to: LQCPHHIPRATGMPS*IPSVDFIFTLRPWL
Trigger: CAACCATGGACGCAGTGTGAATATAAAATCTACACTTGGAATTCAGCTGGGCATACCTGTAGCTCTTGGAATGTGGTGAGGACATTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp ACTCTTGTAGATTGTAGAATCCATTCTGGCACTGATTGCACTGCCTaGCAGACACGTGTCTCTTACAATTACACTGTCCTCCAATCTGAT +
Preference number: 5 (lower is better)
Translates to: TLVDCRIHSGTDCTA*QTRVSYNYTVLQSD
Trigger: ATCAGATTGGAGGACAGTGTAATTGTAAGAGACACGTGTCTGGCAGGCAGTGCAATCAGTGCCAGAATGGATTCTACAATCTACAAGAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp AAGAATTATTTTGCCGTAGGTAGAAGTTTCCCTCCAAACATTTATTaGACTGTCTCCCTTCAACATTGGGCTTGCAGATGCACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: KNYFAVGRSFPPNIY*TVSLQHWACRCTAL
Trigger: CAGGGCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGGGAAACTTCTACCTACGGCAAAATAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp CATATTGATGTCATACCCCACAACTTTTCCTCTTGTAACATTATCTaGTGGCTTCTCCCAGGAGATATTGAGAGAGTACGAAGAGAGGGG +
Preference number: 5 (lower is better)
Translates to: HIDVIPHNFSSCNII*WLLPGDIERVRREG
Trigger: CCCCTCTCTTCGTACTCTCTCAATATCTCCTGGGAGAAGCCAGCAGATAATGTTACAAGAGGAAAAGTTGTGGGGTATGACATCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp AATCAGCAGTTTTTGGGGATTCATAGAAACATAGGATATCACAGGTaGAGAGAGACCTTCTGGAGGTGCTTGCAATGTCCTCACCACATT +
Preference number: 5 (lower is better)
Translates to: NQQFLGIHRNIGYHR*RETFWRCLQCPHHI
Trigger: AATGTGGTGAGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTATGTTTCTATGAATCCCCAAAAACTGCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTGCTGGAAGGAAGACTaGGGTGCCCAGGTAAAGTAT +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTCWKED*GAQVKY
Trigger: ATACTTTACCTGGGCACCCAAGTCTTCCTTCCAGCA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGACTCAGTCAAGGATATaGAAGCAAAATAGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRTQSRI*KQNRQR
Trigger: TCTTTGCCTATTTTGCTTCAATATCCTTGACTGAGT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAATAAAACTTGCAGAATaGCTATGGGCGTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: FGVSVTGCILRISNSMRAIKLAE*LWALGC
Trigger: GCATCCTAACGCCCATAGCAATTCTGCAAGTTTTAT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTATCCAGGACGATAATTaGGTCCAGGTGTCAGGATGC +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPIQDDN*VQVSGC
Trigger: GCATCCTGACACCTGGACCAAATTATCGTCCTGGAT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAAAATGAAACCTTATTaGCGTGGCTTTTACGAACTC +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLKMKPY*RGFYEL
Trigger: GAGTTCGTAAAAGCCACGCAAATAAGGTTTCATTTT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GTCATGGGACTTCCAAAATATTGCGGTACTAGTAAGGCCAGGAGGAGGGTAAGGAAAATGAAACCTTATTaGCGTGGCTTTTACGAACTC +
Preference number: 5 (lower is better)
Translates to: VMGLPKYCGTSKARRRVRKMKPY*RGFYEL
Trigger: GAGTTCGTAAAAGCCACGCAAATAAGGTTTCATTTT...CCTTACCCTCCTCCTGGCCTTACTAGTACCGCAATATTTTGGAAGTCCCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAGGATCTGCACCAACTaGTCGGAAAAAGTAATCCTT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLRICTN*SEKVIL
Trigger: AAGGATTACTTTTTCCGACAAGTTGGTGCAGATCCT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGCCCTCCAAACATTTATaGCACTGTCTCCCTTCAACA +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLPSKHL*HCLPST
Trigger: TGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGGG...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGCATTGGTCACAACGTaGCCCAGCAATGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDALVTT*PSNGSI
Trigger: GATGCTTCCATTGCTGGGCAACGTTGTGACCAATGC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCCTCTGGGCGGAGGTaGCTGGAATGGAGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSSGRR*LEWSFA
Trigger: AGCAAAACTCCATTCCAGCAACCTCCGCCCAGAGGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGATAGCAGAAGAACTTaGAACTTGTCCTCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTDSRRT*NLSSGR
Trigger: CCGCCCAGAGGACAAGTTCAAAGTTCTTCTGCTATC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACTCTGAACTCATACTaGGTGTATGGCTCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTLNSY*VYGSKP
Trigger: TGGCTTGGAGCCATACACCAAGTATGAGTTCAGAGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCTGGATTGTTGTGCTGTaGATTCCTTTAACCAGAGGT +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPWIVVL*IPLTRG
Trigger: ACCTCTGGTTAAAGGAATCAACAGCACAACAATCCA...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCCATCCAGAGTGATTaGGCCAAAAGCCTGATGCCT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPIQSD*AKSLMP
Trigger: AGGCATCAGGCTTTTGGCCAAATCACTCTGGATGGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGCCCACAAAACCTTTTaGGATTATCTCAGGATCCTT +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQAHKTF*DYLRIL
Trigger: AAGGATCCTGAGATAATCCAAAAAGGTTTTGTGGGC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGGGAGTTGGCACACTTaGTGGAGCTGCTCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVGSWHT*WSCSCC
Trigger: ACAACAGGAGCAGCTCCACAAAGTGTGCCAACTCCC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGCTGCGGACTCTaGAGGGAGTTGGCACACTTT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLSCGL*RELAHF
Trigger: AAAGTGTGCCAACTCCCTCAAGAGTCCGCAGCTTAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGGACCCAGGAACTGTTaGTACAGCCCACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVGPRNC*YSPHVC
Trigger: GCACACATGTGGGCTGTACAAACAGTTCCTGGGTCC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTGCAAGCTCCCAGCTaGATGAGATATTTATTACCA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLVQAPS*MRYLLP
Trigger: TGGTAATAAATATCTCATCAAGCTGGGAGCTTGCAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCCCAGAGCACAACCTTaGGCCGTGCATGCTTGGACT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSPRAQP*AVHAWT
Trigger: AGTCCAAGCATGCACGGCCAAAGGTTGTGCTCTGGG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAGCTGCCTTGGCTATTaGAAATATTCACTTGTACAG +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSSCLGY*KYSLVQ
Trigger: CTGTACAAGTGAATATTTCAAATAGCCAAGGCAGCT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATACTCTGTGTACGGTaGGAGATCACTCACTTCATA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLILCVR*EITHFI
Trigger: TATGAAGTGAGTGATCTCCAACCGTACACAGAGTAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCGTACAGCTGTACTGTaGATGATGACAACCTCTGGA +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRTAVL*MMTTSG
Trigger: TCCAGAGGTTGTCATCATCAACAGTACAGCTGTACG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAGTAATTTGGGTTCCATaGCTTTTCACGCAGGCATAT +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLVIWVP*LFTQAY
Trigger: ATATGCCTGCGTGAAAAGCAATGGAACCCAAATTAC...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTAACACATTTCTTCAATaGATGCCTTCCCTGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSNTFLQ*MPSLWN
Trigger: ATTCCACAGGGAAGGCATCAATTGAAGAAATGTGTT...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGAGGCACATCTTCTTTaGTTCTGGCTCTCACAGCTT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLEAHLL*FWLSQL
Trigger: AAGCTGTGAGAGCCAGAACAAAAGAAGATGTGCCTC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGCTCTCCGGAACTCCTaGGGTAGTAGCTGCAACTAC +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQALRNS*GSSCNY
Trigger: GTAGTTGCAGCTACTACCCAAGGAGTTCCGGAGAGC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCCATTACGACTCAATaGATATTGAGAAACGAGGCC +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLSITTQ*ILRNEA
Trigger: GGCCTCGTTTCTCAATATCAATTGAGTCGTAATGGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGGCTGCTTCAGGTGTTTaGACAAACATCCTACTGCTA +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLAASGV*TNILLL
Trigger: TAGCAGTAGGATGTTTGTCAAAACACCTGAAGCAGC...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGAGTTTCTCAGTCCACTaGGGGAAGATTCTAAGGTTT +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSFSVH*GKILRF
Trigger: AAACCTTAGAATCTTCCCCAAGTGGACTGAGAAACT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCCGTCACTGAAGATGTaGTATGTCTTAATCACACCA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPPSLKM*YVLITP
Trigger: TGGTGTGATTAAGACATACAACATCTTCAGTGACGG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTACCTTCTGGAGGTGCTaGCAATGTCCTCACCACATT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPTFWRC*QCPHHI
Trigger: AATGTGGTGAGGACATTGCAAGCACCTCCAGAAGGT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAGGAAATCAGCAGTTTTaGGGGATTCATAGAAACATA +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLGNQQF*GIHRNI
Trigger: TATGTTTCTATGAATCCCCAAAAACTGCTGATTTCC...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCTGGCAGGGCCTCCATaGTCCAGGCAGATTTTGACA +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLAGPP*SRQILT
Trigger: TGTCAAAATCTGCCTGGACAATGGAGGCCCTGCCAG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCCTCCTGGAGCCATTaGTACCTCCAGATGTGGAGG +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSSWSH*YLQMWR
Trigger: CCTCCACATCTGGAGGTACAAATGGCTCCAGGAGGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTACAAAACTTTTCCATTaGGCTGCAGCGGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPTKLFH*AAAVLS
Trigger: GGACAGGACCGCTGCAGCCAAATGGAAAAGTTTTGT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCCAGGGGCACTGATGTaGACCACTGCTTGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVPGALM*TTAWVE
Trigger: TTCTACCCAAGCAGTGGTCAACATCAGTGCCCCTGG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCCTTTGCTGCAACAGTaGAAGCAGGTGCAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQPLLQQ*KQVQAS
Trigger: AGAGGCCTGCACCTGCTTCAACTGTTGCAGCAAAGG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATACATACAGTCCACTGTaGTGGCCCATGATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDTYSPL*WPMMAS
Trigger: GGAAGCCATCATGGGCCACAACAGTGGACTGTATGT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTATTGAAATGTGCTAGGTaGAAGATGTCAGTATTCTCT +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLLKCAR*KMSVFS
Trigger: AGAGAATACTGACATCTTCAACCTAGCACATTTCAA...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGTGAGTGATAACCCAGGAGGAAATGGGTGCAGACCTTGCATTCCAGGGTTAAACAGTAGTTTCCATTaGAAATGTGCTAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CVSDNPGGNGCRPCIPGLNSSFH*KCARLK
Trigger: CTTCAACCTAGCACATTTCAAATGGAAACTACTGTT...TAACCCTGGAATGCAAGGTCTGCACCCATTTCCTCCTGGGTTATCACTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGATGATTTCTTCCAGATaGTGGAACATCAGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQMISSR*WNISGS
Trigger: AGACCCACTGATGTTCCACAATCTGGAAGAAATCAT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAATCAAGAACTGCTCATaGTTTATAAGGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLIKNCS*FIREKG
Trigger: CCCCTTCTCCCTTATAAACAATGAGCAGTTCTTGAT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGCCAGTGAGGCAGGATaGTGCTGGTACAGAGTTCAA +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLASEAG*CWYRVQ
Trigger: TTGAACTCTGTACCAGCACAATCCTGCCTCACTGGC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS TCA 90 bp TGGGACCCCTGGTTTTGTCTTGTAAGTGACAGCTACACTCCTTGTTaGACCATGCACATTGGTGGTCTCAATGTAATAGGAATATTTGGT +
Preference number: 5 (lower is better)
Translates to: WDPWFCLVSDSYTPC*TMHIGGLNVIGIFG
Trigger: ACCAAATATTCCTATTACATTGAGACCACCAATGTGCATGGTTCAACAAGGAGTGTAGCTGTCACTTACAAGACAAAACCAGGGGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp GCAGATGAACACATTTCTTCAATTGATGCCTTCCCTGTGGAATTGTaGGACCCTCTTATCACAGTGCAAATGTGGCTGGTAAAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ADEHISSIDAFPVEL*DPLITVQMWLVKLK
Trigger: CTTCAACTTTACCAGCCACATTTGCACTGTGATAAGAGGGTCTCACAATTCCACAGGGAAGGCATCAATTGAAGAAATGTGTTCATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp TGGTATCGGCTAACCCCTCAAAGTGCATGGTGTAACTTTTTAGGGTaGCATTGCTTGACACATCAGATATATCAGCCACAGAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: WYRLTPQSAWCNFLG*HCLTHQIYQPQSQT
Trigger: TGTTTGACTCTGTGGCTGATATATCTGATGTGTCAAGCAATGTCACCCTAAAAAGTTACACCATGCACTTTGAGGGGTTAGCCGATACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674083.1
CDS GCA 90 bp ATGACCATGGCACTGACATCTCCCACTAATGGTGATTTCGTCCACTaGATAATATCTGTGTCTGAGGTTAACAGCAGTCTCAGTTGTATA +
Preference number: 5 (lower is better)
Translates to: MTMALTSPTNGDFVH*IISVSEVNSSLSCI
Trigger: TATACAACTGAGACTGCTGTTAACCTCAGACACAGATATTATGCAGTGGACGAAATCACCATTAGTGGGAGATGTCAGTGCCATGGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 90 bp AAAGACGTCCCTTCTTCAACTGAAGTGCAAAATACTCTTCCTGATTaGCAGGTGATGCTGCAAAGACAATCAAACCTTCAGGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: KDVPSSTEVQNTLPD*QVMLQRQSNLQALL
Trigger: CAAAAGTGCCTGAAGGTTTGATTGTCTTTGCAGCATCACCTGGCAATCAGGAAGAGTATTTTGCACTTCAGTTGAAGAAGGGACGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp TTGTGCCACCGATTTAAATCTTCTGGGGGATTTGATGCAAGTGGCTaGTGGATTTTACGTCTCAGAAGCTCATATCTCAAATTAGGTCCA +
Preference number: 5 (lower is better)
Translates to: LCHRFKSSGGFDASG*WILRLRSSYLKLGP
Trigger: TGGACCTAATTTGAGATATGAGCTTCTGAGACGTAAAATCCAGCAGCCACTTGCATCAAATCCCCCAGAAGATTTAAATCGGTGGCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp CCTTTCCAGCTGATATATAGGAGAGGGTCCATTCAGTTCTTCAGGTaGAAACCACCTAAGATGGATTGTTGTGCTGTTGATTCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: PFQLIYRRGSIQFFR*KPPKMDCCAVDSFN
Trigger: GTTAAAGGAATCAACAGCACAACAATCCATCTTAGGTGGTTTCCACCTGAAGAACTGAATGGACCCTCTCCTATATATCAGCTGGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTGCTGGAAGGAAGACTaGGGTGCCCAGGTAAAGTAT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDCWKED*GAQVKY
Trigger: ATACTTTACCTGGGCACCCAAGTCTTCCTTCCAGCA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGAGTCCACATACTGCTaGGGTTGGCACGATGGAAAC +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVESTYC*GWHDGN
Trigger: GTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGATGCAGATCATTCTaGTCTGGTGTGATGCAGCTA +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGCRSF*SGVMQL
Trigger: TAGCTGCATCACACCAGACAAGAATGATCTGCATCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCACGTTTGCTTTGCACTaGCACTGGCCTGAATTTTGG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTTFALH*HWPEFW
Trigger: CCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACGT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCCAATAACGTTTGCTTaGCACTTGCACTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPPITFA*HLHWPE
Trigger: TTCAGGCCAGTGCAAGTGCAAAGCAAACGTTATTGG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCCTTCAACATTGGGCTaGCAGATGCACTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSPSTLG*QMHCPV
Trigger: GACAGGGCAGTGCATCTGCAAGCCCAATGTTGAAGG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGTCTCCCTTCAACATaGGGCTTGCAGATGCACTGC +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVCLPST*GLQMHC
Trigger: GCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGACA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCAACACATCTGGCAGTGTaGAAAATTGTCAATGGTCAA +
Preference number: 5 (lower is better)
Translates to: FGVSVTGCILRISNSMRATHLAV*KIVNGQ
Trigger: TTGACCATTGACAATTTTCAACACTGCCAGATGTGT...TGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGTAATGGTCTTTGCATaGGTCACAACGTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDVMVFA*VTTLPS
Trigger: GCTGGGCAACGTTGTGACCAATGCAAAGACCATTAC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTGCTGGAATGGAGTTTaGCTGCAACCCAATAGATTG +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLCWNGV*LQPNRL
Trigger: CAATCTATTGGGTTGCAGCAAAACTCCATTCCAGCA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCAGAAGAACTTTGAACTaGTCCTCTGGGCGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLRRTLN*SSGRRL
Trigger: CAACCTCCGCCCAGAGGACAAGTTCAAAGTTCTTCT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTCTCCCAGGAGATATaGAGAGAGTACGAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPFSQEI*REYEER
Trigger: CCTCTCTTCGTACTCTCTCAATATCTCCTGGGAGAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCCCATCCAGAGTGATTaGGCCAAAAGCCTGATGCCT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVPIQSD*AKSLMP
Trigger: AGGCATCAGGCTTTTGGCCAAATCACTCTGGATGGG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGTTATACACGTTGATTaGTTCTTCAGAACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQVIHVD*FFRTLP
Trigger: TGGCAGAGTTCTGAAGAACAAATCAACGTGTATAAC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCTCTTGTGGGGCTTCTaGTGGAGTAGAGATGTTCAA +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPLLWGF*WSRDVQ
Trigger: TTGAACATCTCTACTCCACAAGAAGCCCCACAAGAG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCAACCTGAAGACTGGTaGGAGTGGCAGATGAAAGCC +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQQPEDW*EWQMKA
Trigger: GGCTTTCATCTGCCACTCCAACCAGTCTTCAGGTTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTAGGTCCATTTGGCTaGGATGGTGGTTGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTLGPFG*DGGCQE
Trigger: TTCTTGGCAACCACCATCCAAGCCAAATGGACCTAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCGTACAGCTGTACTGTaGATGATGACAACCTCTGGA +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPRTAVL*MMTTSG
Trigger: TCCAGAGGTTGTCATCATCAACAGTACAGCTGTACG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGTGTTGGTATATCACTaGGAGTGTCTTCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPVLVYH*ECLPQW
Trigger: CCACTGTGGAAGACACTCCAAGTGATATACCAACAC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGATAGATTCAGGTTTTaGACACCTCACTGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLDRFRF*TPHCLA
Trigger: TGCAAGGCAGTGAGGTGTCAAAAACCTGAATCTATC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCAACAGAAACCCGATaGTGCTGTTCATCTGGACAG +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPTETR*CCSSGQ
Trigger: CTGTCCAGATGAACAGCACAATCGGGTTTCTGTTGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCAACACTCTAAATCGTaGCTCACAATCTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLQHSKS*LTICLP
Trigger: TGGCAGACAGATTGTGAGCAACGATTTAGAGTGTTG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCAAGATTGTCTATTTaGGTCCACGTAGGGGGACTC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSRLSI*VHVGGL
Trigger: GAGTCCCCCTACGTGGACCAAAATAGACAATCTTGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGTAGCTGCAACTACCTaGCTACTGGTGGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSVAATT*LLVAQP
Trigger: TGGCTGTGCCACCAGTAGCAAGGTAGTTGCAGCTAC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGTTACACTTCCATCATaGAGTAAGACATTGTACTCC +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQVTLPS*SKTLYS
Trigger: GGAGTACAATGTCTTACTCAATGATGGAAGTGTAAC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTCCAGAAGGGTGGATaGATGATGACCAACGGAGAA +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPFQKGG*MMTNGE
Trigger: TTCTCCGTTGGTCATCATCAATCCACCCTTCTGGAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTTCCAGAAGGGTGGATaGATGATGACCAACGGAGAA +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTFQKGG*MMTNGE
Trigger: TTCTCCGTTGGTCATCATCAATCCACCCTTCTGGAA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCTCTCCACTGAACCCTaGGAGTTACAGGCTCTGACC +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSLSTEP*ELQALT
Trigger: GGTCAGAGCCTGTAACTCCAAGGGTTCAGTGGAGAG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCTGAGGAGCTGCTCTCTGGAAATCAGCAGTTTTaGGGGATTCATAGAAACATA +
Preference number: 5 (lower is better)
Translates to: LMVGKLCLGVGQSEELLSGNQQF*GIHRNI
Trigger: TATGTTTCTATGAATCCCCAAAAACTGCTGATTTCC...AGAGAGCAGCTCCTCAGACTGACCAACTCCTAGACAAAGTTTGCCAACCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTCAGGGTGGTGCACGCTaGAATTCGTATTTCATACCT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPQGGAR*NSYFIP
Trigger: AGGTATGAAATACGAATTCAAGCGTGCACCACCCTG...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCAGATGTGGAGGGGGTaGCATCAAAGGTGCAATCTC +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQQMWRG*HQRCNL
Trigger: GAGATTGCACCTTTGATGCAACCCCCTCCACATCTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCACAAAAGAGAAACAGTaGGCTGGAATCCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTTKEKQ*AGILLE
Trigger: CTCCAGGAGGATTCCAGCCAACTGTTTCTCTTTTGT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGCAAGCCACGTGGAATaGGAGTTCATAGCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPASHVE*EFIAVN
Trigger: ATTCACAGCTATGAACTCCAATTCCACGTGGCTTGC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGCAAGCCACGTGGAATaGGAGTTCATAGCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTASHVE*EFIAVN
Trigger: ATTCACAGCTATGAACTCCAATTCCACGTGGCTTGC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGTACTTTGTTTCTATTaGGCTGGGAGTACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTVLCFY*AGSTGE
Trigger: CTCCCCTGTACTCCCAGCCAAATAGAAACAAAGTAC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCCAGCCCCGTGTACTTaGTTTCTATTTGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQPAPCT*FLFGWE
Trigger: CTCCCAGCCAAATAGAAACAAAGTACACGGGGCTGG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCTGAGGCAATTCTTTTaGGGTGGTGAAACTGATCCA +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLLRQFF*GGETDP
Trigger: TGGATCAGTTTCACCACCCAAAAAGAATTGCCTCAG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGCTTCCCACAGTGAGTaGTCCATCAAGACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTASHSE*SIKTFL
Trigger: CAAGAAAGTCTTGATGGACAACTCACTGTGGGAAGC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGAACCTTCAGAAAAGTTaGTCGACCTGGTGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLNLQKS*STWCKV
Trigger: AACTTTGCACCAGGTCGACAAACTTTTCTGAAGGTT...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp TCCCTTCTTCAACTGAAGTGCAAAATACTCTTCCTGATTGCCAGGTaGTGCTGCAAAGACAATCAAACCTTCAGGCACTTTTGTTCGAAA +
Preference number: 5 (lower is better)
Translates to: SLLQLKCKILFLIAR*CCKDNQTFRHFCSK
Trigger: TTTCGAACAAAAGTGCCTGAAGGTTTGATTGTCTTTGCAGCATCACCTGGCAATCAGGAAGAGTATTTTGCACTTCAGTTGAAGAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp ATGGAGACATCCTCTTCTGAAGAGGTACCAAGGGAGGTCTTTCTCTaGTATATGGCTCTTTGTGGATTTTTCTTTGTAGTATCAGGGACA +
Preference number: 5 (lower is better)
Translates to: METSSSEEVPREVFL*YMALCGFFFVVSGT
Trigger: TGTCCCTGATACTACAAAGAAAAATCCACAAAGAGCCATATATCAGAGAAAGACCTCCCTTGGTACCTCTTCAGAAGAGGATGTCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp AAGCAATGTCAAACACACTTACCAGTGAAGTCTGTATTGACTGGGTaGGTGGAGCTGGGAAATTTACAATACCCATTTCCTATGAAACGG +
Preference number: 5 (lower is better)
Translates to: KQCQTHLPVKSVLTG*VELGNLQYPFPMKR
Trigger: CCGTTTCATAGGAAATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAGTCAATACAGACTTCACTGGTAAGTGTGTTTGACATTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS CCA 90 bp ACCCATGAAGTACCAACATCATTATCATTGACAAAAGAGAGAGGATaGGCTTCAGGATTCAACCGTGACACTCTATTATCAGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: THEVPTSLSLTKERG*ASGFNRDTLLSAVS
Trigger: AGACACAGCTGATAATAGAGTGTCACGGTTGAATCCTGAAGCCCATCCTCTCTCTTTTGTCAATGATAATGATGTTGGTACTTCATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp TGCCACCGATTTAAATCTTCTGGGGGATTTGATGCAAGTGGCTGCTaGATTTTACGTCTCAGAAGCTCATATCTCAAATTAGGTCCATTT +
Preference number: 5 (lower is better)
Translates to: CHRFKSSGGFDASGC*ILRLRSSYLKLGPF
Trigger: AAATGGACCTAATTTGAGATATGAGCTTCTGAGACGTAAAATCCAGCAGCCACTTGCATCAAATCCCCCAGAAGATTTAAATCGGTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp GGTTCACATCTGTGTAAGAGTACGTGTTTACACTCCCTGTATGAATaGTTTCTTCGGCAGATGAACACATTTCTTCAATTGATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GSHLCKSTCLHSLYE*FLRQMNTFLQLMPS
Trigger: GGAAGGCATCAATTGAAGAAATGTGTTCATCTGCCGAAGAAACCATTCATACAGGGAGTGTAAACACGTACTCTTACACAGATGTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCACTCAGTCAAGGATATaGAAGCAAAATAGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPTQSRI*KQNRQR
Trigger: TCTTTGCCTATTTTGCTTCAATATCCTTGACTGAGT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATACGATGGAAACTTTCTaGAAAGCTCCCACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDTMETF*KAPTFS
Trigger: GGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGGATGCAGATCATTCTaGTCTGGTGTGATGCAGCTA +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLGCRSF*SGVMQL
Trigger: TAGCTGCATCACACCAGACAAGAATGATCTGCATCC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAACACACATTACACCTaGTTGCTCAGGTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTNTHYT*LLRFQP
Trigger: TGGCTGAAACCTGAGCAACAAGGTGTAATGTGTGTT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAACACACATTACACCTaGTTGCTCAGGTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPNTHYT*LLRFQP
Trigger: TGGCTGAAACCTGAGCAACAAGGTGTAATGTGTGTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACGGGGTGCATACTGAGAATCTCCAATAGCATGAGGGCATTTTGCAAACTCATTGGCTTTTACGAACTCTaGAAGAGATGGGGTATTATA +
Preference number: 5 (lower is better)
Translates to: TGCILRISNSMRAFCKLIGFYEL*KRWGII
Trigger: TATAATACCCCATCTCTTCAAGAGTTCGTAAAAGCC...AATGAGTTTGCAAAATGCCCTCATGCTATTGGAGATTCTCAGTATGCACCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAATTGAAAGCGTAAACTaGATCACCTTGGCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQIESVN*ITLAER
Trigger: CCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAAT...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCTCACAGTCACAGGGTTaGCAAACATCTATGGCCGAA +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLSQSQG*QTSMAE
Trigger: TTCGGCCATAGATGTTTGCAAACCCTGTGACTGTGA...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAACATTGTCCTGTTGATTaGTTACACAGCAGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQHCPVD*LHSREP
Trigger: TGGCTCTCTGCTGTGTAACAAATCAACAGGACAATG...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCCCTGTTACCCCTAATTaGCAAGGACATTGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTPVTPN*QGHCPV
Trigger: AACAGGACAATGTCCTTGCAAATTAGGGGTAACAGG...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCATTACACCTTCTTCCTaGACGATTAGGCACACACAG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTITPSS*TIRHTQ
Trigger: CTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAAT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAGCAATGGAAGCATCTaGGCAAACACACTGACCAGT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSNGSI*ANTLTS
Trigger: ACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGTAATGGTCTTTGCATaGGTCACAACGTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQVMVFA*VTTLPS
Trigger: GCTGGGCAACGTTGTGACCAATGCAAAGACCATTAC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTGTAATGGTCTTTGCATaGGTCACAACGTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIVMVFA*VTTLPS
Trigger: GCTGGGCAACGTTGTGACCAATGCAAAGACCATTAC...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATGCTGGAATGGAGTTTaGCTGCAACCCAATAGATTG +
Preference number: 5 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQCWNGV*LQPNRL
Trigger: CAATCTATTGGGTTGCAGCAAAACTCCATTCCAGCA...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGGGTATTGATCCTCTGTaGTGTAGATTTCAAAACCAT +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQGIDPL*CRFQNH
Trigger: ATGGTTTTGAAATCTACACAACAGAGGATCAATACC...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCTTCTCCCAGGAGATATaGAGAGAGTACGAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLFSQEI*REYEER
Trigger: CCTCTCTTCGTACTCTCTCAATATCTCCTGGGAGAA...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGACACAACCAACTGAATaGCAGAGAGTAATAGTAAAC +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQTQPTE*QRVIVN
Trigger: GTTTACTATTACTCTCTGCAATTCAGTTGGTTGTGT...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGCAACCACCGAAACCTaGTTCCAAACACAAATGTTG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTATTET*FQTQML
Trigger: CAACATTTGTGTTTGGAACAAGGTTTCGGTGGTTGC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTGTGAGGTTGCTTGTATaGACAAATTCAGCACTGGCA +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPVRLLV*TNSALA
Trigger: TGCCAGTGCTGAATTTGTCAATACAAGCAACCTCAC...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTAAATATGCCTGTGAGGTaGCTTGTATTGACAAATTCA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLNMPVR*LVLTNS
Trigger: TGAATTTGTCAATACAAGCAACCTCACAGGCATATT...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCAATATGCCTGTGAGGTaGCTTGTATTGACAAATTCA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPNMPVR*LVLTNS
Trigger: TGAATTTGTCAATACAAGCAACCTCACAGGCATATT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCGGGATCCCTGTGTTTaGACAAACACATTTACTGTT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLRDPCV*TNTFTV
Trigger: AACAGTAAATGTGTTTGTCAAAACACAGGGATCCCG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACTACAGGTCCAGGTTaGTCCTCTGCGGTCATGAAT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTTGPG*SSAVMN
Trigger: ATTCATGACCGCAGAGGACAAACCTGGACCTGTAGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTGGGTAATAACCCCATaGGATTTTCTAGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTWVITP*DFLGCC
Trigger: GCAGCATCCTAGAAAATCCAATGGGGTTATTACCCA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTGGGTAATAACCCCATaGGATTTTCTAGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPWVITP*DFLGCC
Trigger: GCAGCATCCTAGAAAATCCAATGGGGTTATTACCCA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAAAGGGAACATCCTTTaGAAGTGCAGGCTTCTACCT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPKGNIL*KCRLLP
Trigger: AGGTAGAAGCCTGCACTTCAAAAGGATGTTCCCTTT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTCACGCAGGCATATATaGTGCAGACTTCAACCTGAA +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPSRRHI*CRLQPE
Trigger: TTCAGGTTGAAGTCTGCACAATATATGCCTGCGTGA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATATACCTGGAAGGCGATaGTACACCACTCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDIPGRR*YTTPSS
Trigger: AGAAGAAGGAGTGGTGTACAATCGCCTTCCAGGTAT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCATCATCATTCCAGTaGAAATCTTGTCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSSSFQ*KSCQSK
Trigger: TTTGCTCTGACAAGATTTCAACTGGAATGATGATGA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCATCATCATTCCAGTaGAAATCTTGTCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLSSSFQ*KSCQSK
Trigger: TTTGCTCTGACAAGATTTCAACTGGAATGATGATGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATCCATTTTGACATGCTaGTATCCTTATCTCATACTG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLSILTC*YPYLIL
Trigger: CAGTATGAGATAAGGATACAAGCATGTCAAAATGGA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTCCACAACTTCCATTTaGACATGCTTGTATCCTTAT +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQSTTSI*TCLYPY
Trigger: ATAAGGATACAAGCATGTCAAAATGGAAGTTGTGGA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTGGGAGATAATGCCATaGGGAGATTCTGGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDWEIMP*GDSGFV
Trigger: GACAAAGCCAGAATCTCCCAATGGCATTATCTCCCA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGTTTCTCAGTCCACTaGGGGAAGATTCTAAGGTTT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSFSVH*GKILRF
Trigger: AAACCTTAGAATCTTCCCCAAGTGGACTGAGAAACT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGTCTTAATCACACCATaGGTTCTCATAGGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLVLITP*VLIGSD
Trigger: GTCAGAACCTATGAGAACCAATGGTGTGATTAAGAC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGCCGTCACTGAAGATGTaGTATGTCTTAATCACACCA +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLPSLKM*YVLITP
Trigger: TGGTGTGATTAAGACATACAACATCTTCAGTGACGG...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTCTCGTCGGCCTGGATaGTCTGATTTCCCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSRRPG*SDFPKL
Trigger: AAGCTTGGGGAAATCAGACAATCCAGGCCGACGAGA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGACTCAAAATACCCCCTaGGCTGTTGCTGGCAGTTAC +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQTQNTP*AVAGSY
Trigger: GTAACTGCCAGCAACAGCCAAGGGGGTATTTTGAGT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACTCAAAATACCCCCTaGGCTGTTGCTGGCAGTTAC +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTQNTP*AVAGSY
Trigger: GTAACTGCCAGCAACAGCCAAGGGGGTATTTTGAGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGGCTGGTTCGATCTTaGACAAGAGGACTCAAAATA +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGLVRS*TRGLKI
Trigger: TATTTTGAGTCCTCTTGTCAAAGATCGAACCAGCCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCACACCACAGACAAATaGCTGTCCACCGAAAATGGG +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVHTTDK*LSTENG
Trigger: CCCATTTTCGGTGGACAGCAATTTGTCTGTGGTGTG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTGGAAAAAGAAGGTTTaGTCCGCCGTTCTCGGTATG +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDWKKKV*SAVLGM
Trigger: CATACCGAGAACGGCGGACAAAACCTTCTTTTTCCA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTCTTTTTCCCAGGAGTaGTTAGGACCAAGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSFSQE*LGPSQV
Trigger: GACTTGGCTTGGTCCTAACAACTCCTGGGAAAAAGA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCATAGAACCTTCAGCCTaGTCAAAAAGTTTGGTAAGT +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPIEPSA*SKSLVS
Trigger: ACTTACCAAACTTTTTGACAAGGCTGAAGGTTCTAT...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AAAAGTACTGATGCCTCAGCCACACACCCCAGATCAACCGAATCAGAATCTCTATGTGTAAGTTATGTGTaGCCTTGTCAAAAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: KSTDASATHPRSTESESLCVSYV*PCQKVW
Trigger: CCAAACTTTTTGACAAGGCAACACATAACTTACACA...TAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGCATCAGTACTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGGCCTGTGCTTTTGACACTTATGGTTGGCAAACTTTGTCTAGGAGTTGGTCAGTTACTTTACAAGTTTTaGCCTGTCTCTGGTTGTAGA +
Preference number: 5 (lower is better)
Translates to: WPVLLTLMVGKLCLGVGQLLYKF*PVSGCR
Trigger: TCTACAACCAGAGACAGGCAAAAACTTGTAAAGTAA...CTGACCAACTCCTAGACAAAGTTTGCCAACCATAAGTGTCAAAAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTATGGTTGGCAAACTTaGTCTAGGAGTTGGTCAGTC +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPYGWQT*SRSWSV
Trigger: GACTGACCAACTCCTAGACAAAGTTTGCCAACCATA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACATTAGAACACCTGGAAGCTTTAAAAAGTACTGATGCCTCAGCCACACACCCCCTTTTTAGGGTGACATaGCTTGACACATCAGATATA +
Preference number: 5 (lower is better)
Translates to: TLEHLEALKSTDASATHPLFRVT*LDTSDI
Trigger: TATATCTGATGTGTCAAGCAATGTCACCCTAAAAAG...GGGGTGTGTGGCTGAGGCATCAGTACTTTTTAAAGCTTCCAGGTGTTCTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000674083.1
CDS TCA 90 bp AATGGCAGCTTTTGGAATGGCTGTTGCATTGACAAGGTTTACAATTaGAAGCGTAAACTTGATCACCTTGGCGGAAAGGCTTGTCATTAT +
Preference number: 5 (lower is better)
Translates to: NGSFWNGCCIDKVYN*KRKLDHLGGKACHY
Trigger: ATAATGACAAGCCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTCAATGCAACAGCCATTCCAAAAGCTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp GATTTGTTCTTCAGAACTCTGCCAATCCAGAGGTTCCCAAATAGCTaGCGGATTGTAATTCTTCATAAAATGTACATCCTTGAGACAGCC +
Preference number: 5 (lower is better)
Translates to: DLFFRTLPIQRFPNS*RIVILHKMYILETA
Trigger: GGCTGTCTCAAGGATGTACATTTTATGAAGAATTACAATCCGTCAGCTATTTGGGAACCTCTGGATTGGCAGAGTTCTGAAGAACAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307340.8
ENST00000463147.1
ENST00000481786.1
ENST00000674083.1
CDS CCA 90 bp AAGAGATGGGGTATTATAGAAGTTATTGTATCCAGGACGATAATTTaGTCCAGGTGTCAGGATGCTAAATGTGACATTGCCACGGGAATA +
Preference number: 5 (lower is better)
Translates to: KRWGIIEVIVSRTII*SRCQDAKCDIATGI
Trigger: TATTCCCGTGGCAATGTCACATTTAGCATCCTGACACCTGGACCAAATTATCGTCCTGGATACAATAACTTCTATAATACCCCATCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp TCCATGAAGAGTGCTCATCAGTACCCGATATTCATATTTTGTCCATaGGCTAAGAGCAGAAGTCTTGTCAATAAACCTCATGGAATGACT +
Preference number: 5 (lower is better)
Translates to: SMKSAHQYPIFIFCP*AKSRSLVNKPHGMT
Trigger: AGTCATTCCATGAGGTTTATTGACAAGACTTCTGCTCTTAGCCCATGGACAAAATATGAATATCGGGTACTGATGAGCACTCTTCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp GCATTTCTGGCTCTTTGGAATAAGTTCAGTCTCACAGCATTTTACTaGCACCGGGTCATTCTTTTTAATATGTGCTTTAGACTCTCCACT +
Preference number: 5 (lower is better)
Translates to: AFLALWNKFSLTAFY*HRVILFNMCFRLST
Trigger: AGTGGAGAGTCTAAAGCACATATTAAAAAGAATGACCCGGTGCCAGTAAAATGCTGTGAGACTGAACTTATTCCAAAGAGCCAGAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp CCTTTGAAGCCTATAGGACTGGATAATACCATTAGACTGTTCTGGTaGGATCCAGGAAATCAGCAGTTTTTGGGGATTCATAGAAACATA +
Preference number: 5 (lower is better)
Translates to: PLKPIGLDNTIRLFW*DPGNQQFLGIHRNI
Trigger: TATGTTTCTATGAATCCCCAAAAACTGCTGATTTCCTGGATCCCACCAGAACAGTCTAATGGTATTATCCAGTCCTATAGGCTTCAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp ATTCCTTTGAAGCCTATAGGACTGGATAATACCATTAGACTGTTCTaGTGGGATCCAGGAAATCAGCAGTTTTTGGGGATTCATAGAAAC +
Preference number: 5 (lower is better)
Translates to: IPLKPIGLDNTIRLF*WDPGNQQFLGIHRN
Trigger: GTTTCTATGAATCCCCAAAAACTGCTGATTTCCTGGATCCCACCAGAACAGTCTAATGGTATTATCCAGTCCTATAGGCTTCAAAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCATAAAACTTGCAGAATaGCTATGGGCGTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTIKLAE*LWALGC
Trigger: GCATCCTAACGCCCATAGCAATTCTGCAAGTTTTAT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTATATGGCTGGCTTGTaGTGTCGCAGTTATCGGCAT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVYMAGL*CRSYRH
Trigger: ATGCCGATAACTGCGACACAACAAGCCAGCCATATA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATCTATATGGCTGGCTaGTTGTGTCGCAGTTATCGG +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQIYMAG*LCRSYR
Trigger: CCGATAACTGCGACACAACAAGCCAGCCATATAGAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTATCTATATGGCTGGCTaGTTGTGTCGCAGTTATCGG +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIIYMAG*LCRSYR
Trigger: CCGATAACTGCGACACAACAAGCCAGCCATATAGAT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGTAAACTTGATCACCTaGGCGGAAAGGCTTGTCATT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDVNLIT*AERLVI
Trigger: AATGACAAGCCTTTCCGCCAAGGTGATCAAGTTTAC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTCACAGTCACAGGGTTaGCAAACATCTATGGCCGAA +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSQSQG*QTSMAE
Trigger: TTCGGCCATAGATGTTTGCAAACCCTGTGACTGTGA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTCCAGTCTTATCACAGTaGCAAGGCAGACAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIPVLSQ*QGRQRK
Trigger: TTTCCTCTGTCTGCCTTGCAACTGTGATAAGACTGG...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCCAGTCTTATCACAGTaGCAAGGCAGACAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVPVLSQ*QGRQRK
Trigger: TTTCCTCTGTCTGCCTTGCAACTGTGATAAGACTGG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAAGGACATTGTCCTGTaGATTTGTTACACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTKDIVL*ICYTAE
Trigger: CTCTGCTGTGTAACAAATCAACAGGACAATGTCCTT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGACACATCTGGCAGTGTaGAAAATTGTCAATGGTCAA +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLTHLAV*KIVNGQ
Trigger: TTGACCATTGACAATTTTCAACACTGCCAGATGTGT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCCTGCAACCCAATAGATaGTTGACATCCAAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLLQPNR*LTSKWL
Trigger: AAGCCACTTGGATGTCAACAATCTATTGGGTTGCAG...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGAAGAACTTTGAACTaGTCCTCTGGGCGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSRRTLN*SSGRRL
Trigger: CAACCTCCGCCCAGAGGACAAGTTCAAAGTTCTTCT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAATGGATTGTTGTGCTGTaGATTCCTTTAACCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQWIVVL*IPLTRG
Trigger: ACCTCTGGTTAAAGGAATCAACAGCACAACAATCCA...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACCGAATCAGAATCTCTAGAGGCGAGTCTGCATGGTTTGTATAATAGAGGCTTGTTCCAAACACAAATGTaGATAAGAGTTCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: TESESLEASLHGLYNRGLFQTQM*IRVQQF
Trigger: GAACTGCTGAACTCTTATCAACATTTGTGTTTGGAA...CAAGCCTCTATTATACAAACCATGCAGACTCGCCTCTAGAGATTCTGATTCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGAGCTGCCTTGGCTATTaGAAATATTCACTTGTACAG +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSCLGY*KYSLVQ
Trigger: CTGTACAAGTGAATATTTCAAATAGCCAAGGCAGCT...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCACTACAGGTCCAGGTTaGTCCTCTGCGGTCATGAAT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSTTGPG*SSAVMN
Trigger: ATTCATGACCGCAGAGGACAAACCTGGACCTGTAGT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTCCACAGTGGTAATTaGGGTTCCATTGCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPFHSGN*GSIAFH
Trigger: GTGAAAAGCAATGGAACCCAAATTACCACTGTGGAA...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAGCAGCACTGATGATTaGGTTGTGCCTCCTGTATTC +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQSSTDD*VVPPVF
Trigger: GAATACAGGAGGCACAACCAAATCATCAGTGCTGCT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCTCCATTACGACTCAATaGATATTGAGAAACGAGGCC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTSITTQ*ILRNEA
Trigger: GGCCTCGTTTCTCAATATCAATTGAGTCGTAATGGA...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCTGAGGCAATTCTTTTaGGGTGGTGAAACTGATCCA +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLRQFF*GGETDP
Trigger: TGGATCAGTTTCACCACCCAAAAAGAATTGCCTCAG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCAAGACTTTCTTGTCTaGAATGTCCATGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDQDFLV*NVHELA
Trigger: AGCCAGCTCATGGACATTCAAGACAAGAAAGTCTTG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCACAATCTTTTACTGTaGGGCCCTGGGGTAATACAT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDHNLLL*GPGVIH
Trigger: ATGTATTACCCCAGGGCCCAACAGTAAAAGATTGTG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp TCATACTTGGTGTATGGCTCCAAGCCAGTGATGGTTGTCATTGTTTaGGGAGGTTTTAATGCATTTTCATTGGCCGATTCTACAAATGAA +
Preference number: 5 (lower is better)
Translates to: SYLVYGSKPVMVVIV*GGFNAFSLADSTNE
Trigger: TTCATTTGTAGAATCGGCCAATGAAAATGCATTAAAACCTCCTCAAACAATGACAACCATCACTGGCTTGGAGCCATACACCAAGTATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp TCTACTATAAAGTTTCTCAGTCCACTTGGGGAAGATTCTAAGGTTTaGATCAGAGTCCAAGGGCTTAAAATTTCTCCTGCATGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: STIKFLSPLGEDSKV*IRVQGLKISPAWFA
Trigger: TGCAAACCATGCAGGAGAAATTTTAAGCCCTTGGACTCTGATTCAAACCTTAGAATCTTCCCCAAGTGGACTGAGAAACTTTATAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp AGAAGCTCATATCTCAAATTAGGTCCATTTGGCTTGGATGGTGGTTaGCAAGAAATCACAACATATGATTCACTTAGTGGAATCACAGAC +
Preference number: 5 (lower is better)
Translates to: RSSYLKLGPFGLDGG*QEITTYDSLSGITD
Trigger: GTCTGTGATTCCACTAAGTGAATCATATGTTGTGATTTCTTGGCAACCACCATCCAAGCCAAATGGACCTAATTTGAGATATGAGCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp ACTTCCATTTTGACATGCTTGTATCCTTATCTCATACTGTGTGAATaGAGTCAAATTTTCCAGAAGGGTGGATTGATGATGACCAACGGA +
Preference number: 5 (lower is better)
Translates to: TSILTCLYPYLILCE*SQIFQKGGLMMTNG
Trigger: TCCGTTGGTCATCATCAATCCACCCTTCTGGAAAATTTGACTCCATTCACACAGTATGAGATAAGGATACAAGCATGTCAAAATGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGACACATTACACCTTGTaGCTCAGGTTTCAGCCATAC +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQTHYTL*LRFQPY
Trigger: GTATGGCTGAAACCTGAGCAACAAGGTGTAATGTGT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAACACACATTACACCTaGTTGCTCAGGTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTINTHYT*LLRFQP
Trigger: TGGCTGAAACCTGAGCAACAAGGTGTAATGTGTGTT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTGTAAACTTGATCACCTaGGCGGAAAGGCTTGTCATT +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIVNLIT*AERLVI
Trigger: AATGACAAGCCTTTCCGCCAAGGTGATCAAGTTTAC...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCGGAATGGCTGTTGCATaGACAAGGTTTACAATTGAA +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTGMAVA*TRFTIE
Trigger: TTCAATTGTAAACCTTGTCAATGCAACAGCCATTCC...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCCAGTCTTATCACAGTaGCAAGGCAGACAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSPVLSQ*QGRQRK
Trigger: TTTCCTCTGTCTGCCTTGCAACTGTGATAAGACTGG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATTACACCTTCTTCCTaGACGATTAGGCACACACAG +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVITPSS*TIRHTQ
Trigger: CTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGCAATGGAAGCATCTaGGCAAACACACTGACCAGT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSNGSI*ANTLTS
Trigger: ACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTCAACCCAATAGATTGTaGACATCCAAGTGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIQPNRL*TSKWLA
Trigger: TGCAAGCCACTTGGATGTCAACAATCTATTGGGTTG...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGGGTATTGATCCTCTGTaGTGTAGATTTCAAAACCAT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLGIDPL*CRFQNH
Trigger: ATGGTTTTGAAATCTACACAACAGAGGATCAATACC...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TCTTACAATGCTTTTTGGAGTTTCAGTAACGGGGTGCATACTGAGAATCTCCAAACAGAAAAATCGTACTaGGCAAATGGAACCAGATTC +
Preference number: 5 (lower is better)
Translates to: SYNAFWSFSNGVHTENLQTEKSY*ANGTRF
Trigger: GAATCTGGTTCCATTTGCCAAGTACGATTTTTCTGT...TTGGAGATTCTCAGTATGCACCCCGTTACTGAAACTCCAAAAAGCATTGTAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCACAGAAAAATCGTACTaGGCAAATGGAACCAGATTC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTTEKSY*ANGTRF
Trigger: GAATCTGGTTCCATTTGCCAAGTACGATTTTTCTGT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCGGGATCCCTGTGTTTaGACAAACACATTTACTGTT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDRDPCV*TNTFTV
Trigger: AACAGTAAATGTGTTTGTCAAAACACAGGGATCCCG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAAAGGGAACATCCTTTaGAAGTGCAGGCTTCTACCT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVKGNIL*KCRLLP
Trigger: AGGTAGAAGCCTGCACTTCAAAAGGATGTTCCCTTT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTAGGTCCATTTGGCTaGGATGGTGGTTGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSLGPFG*DGGCQE
Trigger: TTCTTGGCAACCACCATCCAAGCCAAATGGACCTAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCATACCTGGAAGGCGATaGTACACCACTCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSIPGRR*YTTPSS
Trigger: AGAAGAAGGAGTGGTGTACAATCGCCTTCCAGGTAT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGAGGCACATCTTCTTTaGTTCTGGCTCTCACAGCTT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSEAHLL*FWLSQL
Trigger: AAGCTGTGAGAGCCAGAACAAAAGAAGATGTGCCTC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCCATTTTGACATGCTaGTATCCTTATCTCATACTG +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSILTC*YPYLIL
Trigger: CAGTATGAGATAAGGATACAAGCATGTCAAAATGGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp CATGATTTCTTCCAGATTGTGGAACATCAGTGGGTCTCAACATTAGAACACCTGTCCACAACTTCCATTTaGACATGCTTGTATCCTTAT +
Preference number: 5 (lower is better)
Translates to: HDFFQIVEHQWVSTLEHLSTTSI*TCLYPY
Trigger: ATAAGGATACAAGCATGTCAAAATGGAAGTTGTGGA...CAGGTGTTCTAATGTTGAGACCCACTGATGTTCCACAATCTGGAAGAAATCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGGGAGATTCTGGCTTaGTCCAATTCAACAGAACTG +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVWEILA*SNSTEL
Trigger: CAGTTCTGTTGAATTGGACAAAGCCAGAATCTCCCA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTGGGAGATTCTGGCTTaGTCCAATTCAACAGAACTG +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQWEILA*SNSTEL
Trigger: CAGTTCTGTTGAATTGGACAAAGCCAGAATCTCCCA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTCTTTTTCCCAGGAGTaGTTAGGACCAAGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSFSQE*LGPSQV
Trigger: GACTTGGCTTGGTCCTAACAACTCCTGGGAAAAAGA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCAAGACTTTCTTGTCTaGAATGTCCATGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQQDFLV*NVHELA
Trigger: AGCCAGCTCATGGACATTCAAGACAAGAAAGTCTTG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATCCCTGGGGTAATACATaGTTTTCAGGCAGAATAAGT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDPWGNT*FSGRIS
Trigger: ACTTATTCTGCCTGAAAACAATGTATTACCCCAGGG...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp GAGGAACCTGTATATATCCCATCCAGAGTGATTTGGCCAAAAGCCTaGTGCCTAATAGCAATTATTTCATGCCATTTTCCATCACTATAT +
Preference number: 5 (lower is better)
Translates to: EEPVYIPSRVIWPKA*CLIAIISCHFPSLY
Trigger: ATATAGTGATGGAAAATGGCATGAAATAATTGCTATTAGGCATCAGGCTTTTGGCCAAATCACTCTGGATGGGATATATACAGGTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000481786.1
ENST00000674083.1
CDS TCA 90 bp CCCAATTACTGTGATATTATATGGAGGATAGATTTCTTCTGGTGTTaGCATAGGTGTTTGAACAATGTAATCATCACTAGCACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: PNYCDIIWRIDFFWC*HRCLNNVIITSTAA
Trigger: GGCAGCAGTGCTAGTGATGATTACATTGTTCAAACACCTATGTCAACACCAGAAGAAATCTATCCTCCATATAATATCACAGTAATTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp CACAACTTCCATTTTGACATGCTTGTATCCTTATCTCATACTGTGTaGATGGAGTCAAATTTTCCAGAAGGGTGGATTGATGATGACCAA +
Preference number: 5 (lower is better)
Translates to: HNFHFDMLVSLSHTV*MESNFPEGWIDDDQ
Trigger: TTGGTCATCATCAATCCACCCTTCTGGAAAATTTGACTCCATTCACACAGTATGAGATAAGGATACAAGCATGTCAAAATGGAAGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp AATAAAGCAATGTCAAACACACTTACCAGTGAAGTCTGTATTGACTaGGTGAGTGGAGCTGGGAAATTTACAATACCCATTTCCTATGAA +
Preference number: 5 (lower is better)
Translates to: NKAMSNTLTSEVCID*VSGAGKFTIPISYE
Trigger: TTCATAGGAAATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAGTCAATACAGACTTCACTGGTAAGTGTGTTTGACATTGCTTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCTTGCCAGCAATACTTaGAAGCAGGGTACTTTAAGT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVLASNT*KQGTLS
Trigger: ACTTAAAGTACCCTGCTTCAAAGTATTGCTGGCAAG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTTACCGGTGTGTTCATGGATGCCAGCATGATTTTTACATCAGTATATGGTACCAAAATGAAACCTTATTaGCGTGGCTTTTACGAACTC +
Preference number: 5 (lower is better)
Translates to: FTGVFMDASMIFTSVYGTKMKPY*RGFYEL
Trigger: GAGTTCGTAAAAGCCACGCAAATAAGGTTTCATTTT...GGTACCATATACTGATGTAAAAATCATGCTGGCATCCATGAACACACCGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCGGAATGGCTGTTGCATaGACAAGGTTTACAATTGAA +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLGMAVA*TRFTIE
Trigger: TTCAATTGTAAACCTTGTCAATGCAACAGCCATTCC...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAGGATCTGCACCAACTaGTCGGAAAAAGTAATCCTT +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIRICTN*SEKVIL
Trigger: AAGGATTACTTTTTCCGACAAGTTGGTGCAGATCCT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGCAGAGAGCCATTTATaGTCCCAGTCTTATCACAGT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSAESHL*SQSYHS
Trigger: ACTGTGATAAGACTGGGACAATAAATGGCTCTCTGC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTAAGGACATTGTCCTGTaGATTTGTTACACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIKDIVL*ICYTAE
Trigger: CTCTGCTGTGTAACAAATCAACAGGACAATGTCCTT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGAAGGACATTGTCCTGTaGATTTGTTACACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQKDIVL*ICYTAE
Trigger: CTCTGCTGTGTAACAAATCAACAGGACAATGTCCTT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATACACATCTGGCAGTGTaGAAAATTGTCAATGGTCAA +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDTHLAV*KIVNGQ
Trigger: TTGACCATTGACAATTTTCAACACTGCCAGATGTGT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TGTGACTATTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTAATACTGTATGGGTATaGATCCTCTGTTGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: CDYCVLDRVNIFLGSQRPNTVWV*ILCCVD
Trigger: ATCTACACAACAGAGGATCAATACCCATACAGTATT...AGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAATAGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTGGATTGTTGTGCTGTaGATTCCTTTAACCAGAGGT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVWIVVL*IPLTRG
Trigger: ACCTCTGGTTAAAGGAATCAACAGCACAACAATCCA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGATACTCTGTGTACGGTaGGAGATCACTCACTTCATA +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQILCVR*EITHFI
Trigger: TATGAAGTGAGTGATCTCCAACCGTACACAGAGTAT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATGTAAAACCCACACTGTaGTGTACGAAGAGCATATAT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDVKPTL*CTKSIY
Trigger: ATATATGCTCTTCGTACACAACAGTGTGGGTTTTAC...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCACGAATTGTGGGTGTaGGTATATCACTTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSHELWV*VYHLEC
Trigger: ACACTCCAAGTGATATACCAACACCCACAATTCGTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCAACACTCTAAATCGTaGCTCACAATCTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSQHSKS*LTICLP
Trigger: TGGCAGACAGATTGTGAGCAACGATTTAGAGTGTTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTCCACTGTTGTAGAATaGATGATAATGTGTCGAGGT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDSTVVE*MIMCRG
Trigger: ACCTCGACACATTATCATCAATTCTACAACAGTGGA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGCTGCTTCAGGTGTTTaGACAAACATCCTACTGCTA +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSAASGV*TNILLL
Trigger: TAGCAGTAGGATGTTTGTCAAAACACCTGAAGCAGC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGAGCATTTCATTCCTTaGAAGCCTATAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVEHFIP*KPIGLD
Trigger: ATCCAGTCCTATAGGCTTCAAAGGAATGAAATGCTC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTCCCTGGGGTAATACATaGTTTTCAGGCAGAATAAGT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVPWGNT*FSGRIS
Trigger: ACTTATTCTGCCTGAAAACAATGTATTACCCCAGGG...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp CTTATAATTATTCCATTTAGTTCCGCTGGTGGAGACCATTCTACATaGAGTTCTGTAGAACTGATTTTCTGCATCTTAGGTGGACTTAGT +
Preference number: 5 (lower is better)
Translates to: LIIIPFSSAGGDHST*SSVELIFCILGGLS
Trigger: ACTAAGTCCACCTAAGATGCAGAAAATCAGTTCTACAGAACTTCATGTAGAATGGTCTCCACCAGCGGAACTAAATGGAATAATTATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 90 bp CATTGCAATTGTTATAGGATCAGTTATCAAGCTGCCTTGGCTATTTaGAATATTCACTTGTACAGTATAGTTGGTAAAAGGAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: HCNCYRISYQAALAI*NIHLYSIVGKRNQP
Trigger: GGGCTGGTTCCTTTTACCAACTATACTGTACAAGTGAATATTTCAAATAGCCAAGGCAGCTTGATAACTGATCCTATAACAATTGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 90 bp ATTATTTACATAGATAGAATACTCAGTGACAACACCATTTGGGTTTaGAGGAGATGTCCAGATGACACGTACAGCTGTACTGTTGATGAT +
Preference number: 5 (lower is better)
Translates to: IIYIDRILSDNTIWV*RRCPDDTYSCTVDD
Trigger: ATCATCAACAGTACAGCTGTACGTGTCATCTGGACATCTCCTTCAAACCCAAATGGTGTTGTCACTGAGTATTCTATCTATGTAAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 90 bp AGAATCTCTCTGTTTGTAAGTGCCACTTGGTATAATCGAAAATCTTaGATTCTTCCGACAAACTGCTCTAAACCATTTAAACTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: RISLFVSATWYNRKS*ILPTNCSKPFKLCP
Trigger: AGGACAGAGTTTAAATGGTTTAGAGCAGTTTGTCGGAAGAATGCAAGATTTTCGATTATACCAAGTGGCACTTACAAACAGAGAGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 90 bp CAAACATATTTCAAAGGATTATATCCAACTCCATTACAGCATTTCTaGCTCTTTGGAATAAGTTCAGTCTCACAGCATTTTACTGGCACC +
Preference number: 5 (lower is better)
Translates to: QTYFKGLYPTPLQHF*LFGISSVSQHFTGT
Trigger: GGTGCCAGTAAAATGCTGTGAGACTGAACTTATTCCAAAGAGCCAGAAATGCTGTAATGGAGTTGGATATAATCCTTTGAAATATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGGCTTTTACGAACTCTaGAAGAGATGGGGTATTATA +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQGFYEL*KRWGII
Trigger: TATAATACCCCATCTCTTCAAGAGTTCGTAAAAGCC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGGAATGGCTGTTGCATaGACAAGGTTTACAATTGAA +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQGMAVA*TRFTIE
Trigger: TTCAATTGTAAACCTTGTCAATGCAACAGCCATTCC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp GACATGCTGAAACAATCAGGCAAAAGCTATCAAAGGGCTGAATTAGTATTTCTCAATACTGTATGGGTATaGATCCTCTGTTGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: DMLKQSGKSYQRAELVFLNTVWV*ILCCVD
Trigger: ATCTACACAACAGAGGATCAATACCCATACAGTATT...GAGAAATACTAATTCAGCCCTTTGATAGCTTTTGCCTGATTGTTTCAGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATAATACTGTATGGGTATaGATCCTCTGTTGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDNTVWV*ILCCVD
Trigger: ATCTACACAACAGAGGATCAATACCCATACAGTATT...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTACAGAAAAATCGTACTaGGCAAATGGAACCAGATTC +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVTEKSY*ANGTRF
Trigger: GAATCTGGTTCCATTTGCCAAGTACGATTTTTCTGT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCGTGCAAGCTCCCAGCTaGATGAGATATTTATTACCA +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSVQAPS*MRYLLP
Trigger: TGGTAATAAATATCTCATCAAGCTGGGAGCTTGCAC...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGCTAAGAGCAGAAGTCTaGTCAATAAACCTCATGGAA +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQLRAEV*SINLME
Trigger: TTCCATGAGGTTTATTGACAAGACTTCTGCTCTTAG...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGGTAAAACCCACACTGTaGTGTACGAAGAGCATATAT +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQVKPTL*CTKSIY
Trigger: ATATATGCTCTTCGTACACAACAGTGTGGGTTTTAC...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTCCACAGTGGTAATTaGGGTTCCATTGCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFHSGN*GSIAFH
Trigger: GTGAAAAGCAATGGAACCCAAATTACCACTGTGGAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTTCCACTGTTGTAGAATaGATGATAATGTGTCGAGGT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVSTVVE*MIMCRG
Trigger: ACCTCGACACATTATCATCAATTCTACAACAGTGGA...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTGTTACACTTCCATCATaGAGTAAGACATTGTACTCC +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVVTLPS*SKTLYS
Trigger: GGAGTACAATGTCTTACTCAATGATGGAAGTGTAAC...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCAGTAGAGGTATCATATaGGATCAACGGCGTCTTAAC +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSSRGII*DQRRLN
Trigger: GTTAAGACGCCGTTGATCCAATATGATACCTCTACT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp TTGTGTGTTAGACAGAGTCAATATTTTCCTGGGGTCACAAAGACCTTTAAGGATTTACTTTACAAGTTTTaGCCTGTCTCTGGTTGTAGA +
Preference number: 5 (lower is better)
Translates to: LCVRQSQYFPGVTKTFKDLLYKF*PVSGCR
Trigger: TCTACAACCAGAGACAGGCAAAAACTTGTAAAGTAA...ATCCTTAAAGGTCTTTGTGACCCCAGGAAAATATTGACTCTGTCTAACACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCATCAAGAACTGCTCATaGTTTATAAGGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSIKNCS*FIREKG
Trigger: CCCCTTCTCCCTTATAAACAATGAGCAGTTCTTGAT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATGTGGCATGTACAATaGGTAAAATGTGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVMWHVQ*VKCESG
Trigger: TCCTGACTCACATTTTACCAATTGTACATGCCACAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 90 bp AAAATGAAACCTTATTTGCGTGGCTTTTACGAACTCTTGAAGAGATaGGGTATTATAGAAGTTATTGTATCCAGGACGATAATTTGGTCC +
Preference number: 5 (lower is better)
Translates to: KMKPYLRGFYELLKR*GIIEVIVSRTIIWS
Trigger: GGACCAAATTATCGTCCTGGATACAATAACTTCTATAATACCCCATCTCTTCAAGAGTTCGTAAAAGCCACGCAAATAAGGTTTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTGGTATTGATCCTCTGTaGTGTAGATTTCAAAACCAT +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTIGIDPL*CRFQNH
Trigger: ATGGTTTTGAAATCTACACAACAGAGGATCAATACC...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp ATTACCAAGGTGCATCAGCAGCCAGTCTCAATGAAAAGCAAACTATTTACTATTACACAACCAACTGAATaGCAGAGAGTAATAGTAAAC +
Preference number: 5 (lower is better)
Translates to: ITKVHQQPVSMKSKLFTITQPTE*QRVIVN
Trigger: GTTTACTATTACTCTCTGCAATTCAGTTGGTTGTGT...AATAGTAAATAGTTTGCTTTTCATTGAGACTGGCTGCTGATGCACCTTGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGACACAACCAACTGAATaGCAGAGAGTAATAGTAAAC +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQTQPTE*QRVIVN
Trigger: GTTTACTATTACTCTCTGCAATTCAGTTGGTTGTGT...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCCAGCTGTTATACACGTaGATTTGTTCTTCAGAACTC +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSQLLYT*ICSSEL
Trigger: GAGTTCTGAAGAACAAATCAACGTGTATAACAGCTG...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTATAGAACCTTCAGCCTaGTCAAAAAGTTTGGTAAGT +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVIEPSA*SKSLVS
Trigger: ACTTACCAAACTTTTTGACAAGGCTGAAGGTTCTAT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AATTTTTCTTGCCATAGGACTTTCACCAATGACTTTGTAATCCAACTAGAGCAGTGTGTAAGTTATGTGTaGCCTTGTCAAAAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: NFSCHRTFTNDFVIQLEQCVSYV*PCQKVW
Trigger: CCAAACTTTTTGACAAGGCAACACATAACTTACACA...CTGCTCTAGTTGGATTACAAAGTCATTGGTGAAAGTCCTATGGCAAGAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp ACAGTCACTGCCAGATGTGCACAATTATTTCAGATGCTTTTGTTTATAGCAGTTAACAGTAGTTTCCATTaGAAATGTGCTAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TVTARCAQLFQMLLFIAVNSSFH*KCARLK
Trigger: CTTCAACCTAGCACATTTCAAATGGAAACTACTGTT...AACTGCTATAAACAAAAGCATCTGAAATAATTGTGCACATCTGGCAGTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCACTCAGTCAAGGATATaGAAGCAAAATAGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSTQSRI*KQNRQR
Trigger: TCTTTGCCTATTTTGCTTCAATATCCTTGACTGAGT...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTCCAAACACAAATGTaGATAAGAGTTCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSFQTQM*IRVQQF
Trigger: GAACTGCTGAACTCTTATCAACATTTGTGTTTGGAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS-3UTR CAA 90 bp AACAGAATCATTTTTGAGCCAGTAACTAACTTACTACTTCTAACAACTGTGAGCTTGAAATGTGCTAGGTaGAAGATGTCAGTATTCTCT +
Preference number: 5 (lower is better)
Translates to: NRIIFEPVTNLLLLTTVSLKCAR*KMSVFS
Trigger: AGAGAATACTGACATCTTCAACCTAGCACATTTCAA...GCTCACAGTTGTTAGAAGTAGTAAGTTAGTTACTGGCTCAAAAATGATTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GGCTTCATCTGTCCACAGAGGCTGAGGCGCCGAGTGTaGACAACCTGCTCTGGTGCAGGCCTCCAGGGTCAG +
Preference number: 6 (lower is better)
Translates to: GFICPQRLRRRV*TTCSGAGLQGQ
Trigger: CTGACCCTGGAGGCCTGCACCAGAGCAGGTTGTGCACACTCGGCGCCTCAGCCTCTGTGGACAGATGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp ATGCAGTACCGCTGTGCCAAAGGGTGGACCCGCGGGTaGCTGCCAGGGCAACGGCAATGTGATTGGGCATGC +
Preference number: 6 (lower is better)
Translates to: MQYRCAKGWTRG*LPGQRQCDWAC
Trigger: GCATGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCGGTACTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp AGTACCGCTGTGCCAAAGGGTGGACCCGCGGGTGGCTaGCAGGGCAACGGCAATGTGATTGGGCATGCAATC +
Preference number: 6 (lower is better)
Translates to: STAVPKGGPAGG*QGNGNVIGHAI
Trigger: GATTGCATGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCGGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp TGTCCACAGAGGCTGAGGCGCCGAGTGTGCACAACCTaGTCTGGTGCAGGCCTCCAGGGTCAGTGTGTAGAG +
Preference number: 6 (lower is better)
Translates to: CPQRLRRRVCTT*SGAGLQGQCVE
Trigger: CTCTACACACTGACCCTGGAGGCCTGCACCAGAGCAGGTTGTGCACACTCGGCGCCTCAGCCTCTGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp TGTGTCTCCTGCATCATTAGGAATGCAGTACCGCTGTaGCAAAGGGTGGACCCGCGGGTGGCTGCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: CVSCIIRNAVPL*QRVDPRVAARA
Trigger: TGCCCTGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATTCCTAATGATGCAGGAGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp GCATCATTAGGAATGCAGTACCGCTGTGCCAAAGGGTaGACCCGCGGGTGGCTGCCAGGGCAACGGCAATGT +
Preference number: 6 (lower is better)
Translates to: ASLGMQYRCAKG*TRGWLPGQRQC
Trigger: ACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATTCCTAATGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp AGAGATCACATGGAACGTGGGGGCTCTGAGACCTTCTaGTGGGGCTGGCCCGGTTCTGCACCATGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: RDHMERGGSETF*WGWPGSAPCPA
Trigger: AGCTGGACATGGTGCAGAACCGGGCCAGCCCCACCAGAAGGTCTCAGAGCCCCCACGTTCCATGTGATCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GGCACTGACGGCCCAAAGATCTGGAGGGCTGACTTCTaGTGGAGCAGCCTCCAGAGTTGTGATGCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: GTDGPKIWRADF*WSSLQSCDAGG
Trigger: CCCACCAGCATCACAACTCTGGAGGCTGCTCCATCAGAAGTCAGCCCTCCAGATCTTTGGGCCGTCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GACTCGGGATGCGCAGGACACATGCACTCCGGTTGCTaGGGATACTCACAGGTGTCCCAGACCGGGGAATTT +
Preference number: 6 (lower is better)
Translates to: DSGCAGHMHSGC*GYSQVSQTGEF
Trigger: AAATTCCCCGGTCTGGGACACCTGTGAGTATCCGCAGCAACCGGAGTGCATGTGTCCTGCGCATCCCGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp TTTGACTCGGGATGCGCAGGACACATGCACTCCGGTTaGTGCGGATACTCACAGGTGTCCCAGACCGGGGAA +
Preference number: 6 (lower is better)
Translates to: FDSGCAGHMHSG*CGYSQVSQTGE
Trigger: TTCCCCGGTCTGGGACACCTGTGAGTATCCGCAGCAACCGGAGTGCATGTGTCCTGCGCATCCCGAGTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CAACCTGAAGACTGGTTGGAGTGGCAGATGAAAGCCTaGGAGGCAGCACGCCATCTGGAGCTCCTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: QPEDWLEWQMKA*EAARHLELLEA
Trigger: TGCCTCCAGGAGCTCCAGATGGCGTGCTGCCTCCCAGGCTTTCATCTGCCACTCCAACCAGTCTTCAGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp AGAAGGTTTTGTCCGCCGTTCTCGGTATGTAGAGGGTaGTGTCCAAGCCGCTGTACACGCGTCGCCCTCCGT +
Preference number: 6 (lower is better)
Translates to: RRFCPPFSVCRG*CPSRCTRVALR
Trigger: ACGGAGGGCGACGCGTGTACAGCGGCTTGGACACCACCCTCTACATACCGAGAACGGCGGACAAAACCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp GACGATCCCGTTGGGCTTCCCAGGGGCACTGATGTTGACCACTGCTaGGGTAGAAGAGATCACATGGAACGTGGGGGCTCTGAGACCTTC +
Preference number: 6 (lower is better)
Translates to: DDPVGLPRGTDVDHC*GRRDHMERGGSETF
Trigger: GAAGGTCTCAGAGCCCCCACGTTCCATGTGATCTCTTCTACCCAAGCAGTGGTCAACATCAGTGCCCCTGGGAAGCCCAACGGGATCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp ATCAGAGAACAGCTCTGGACTTGGGATCCCTTCCGGTaGCCCTGGGAGTGTCCATACAGTCTGGGACTCTGG +
Preference number: 6 (lower is better)
Translates to: IREQLWTWDPFR*PWECPYSLGLW
Trigger: CCAGAGTCCCAGACTGTATGGACACTCCCAGGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GATCCACTCGGAAGCCGTACTGCCCACCTCGTTGTGTaGCACCACTCTCAGCTTGTATGTGGTGTAGGGCTG +
Preference number: 6 (lower is better)
Translates to: DPLGSRTAHLVV*HHSQLVCGVGL
Trigger: CAGCCCTACACCACATACAAGCTGAGAGTGGTGGCACACAACGAGGTGGGCAGTACGGCTTCCGAGTGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GCTGGTTTGGTTTTGACTCGGGATGCGCAGGACACATaGACTCCGGTTGCTGCGGATACTCACAGGTGTCCC +
Preference number: 6 (lower is better)
Translates to: AGLVLTRDAQDT*TPVAADTHRCP
Trigger: GGGACACCTGTGAGTATCCGCAGCAACCGGAGTGCATGTGTCCTGCGCATCCCGAGTCAAAACCAAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CCACCTCGTTGTGTGCCACCACTCTCAGCTTGTATGTaGTGTAGGGCTGGAGACCCCCAAGGCTGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: PPRCVPPLSACM*CRAGDPQGWLS
Trigger: AGAAAGCCAGCCTTGGGGGTCTCCAGCCCTACACCACATACAAGCTGAGAGTGGTGGCACACAACGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp CCTGAGGGTGGGGCAGGATGGGTTCTCAGTTCAGCTGTCGGTCCTTaGCTGCAACAGTTGAAGCAGGTGCAGGCCTCTACTCCAATAGAG +
Preference number: 6 (lower is better)
Translates to: PEGGAGWVLSSAVGP*LQQLKQVQASTPIE
Trigger: CTCTATTGGAGTAGAGGCCTGCACCTGCTTCAACTGTTGCAGCAAAGGACCGACAGCTGAACTGAGAACCCATCCTGCCCCACCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp AGGAAGCATGCCCTGAGGCTCCCCATCGCAAGTGGTTaGATGAAGTCCTGCACTGTTGATGCTGTGGACTCC +
Preference number: 6 (lower is better)
Translates to: RKHALRLPIASG*MKSCTVDAVDS
Trigger: GGAGTCCACAGCATCAACAGTGCAGGACTTCATGCAACCACTTGCGATGGGGAGCCTCAGGGCATGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GGGAGTAGGTTAGGCTGGTTTGGTTTTGACTCGGGATaGGCAGGACACATGCACTCCGGTTGCTGCGGATAC +
Preference number: 6 (lower is better)
Translates to: GSRLGWFGFDSG*AGHMHSGCCGY
Trigger: GTATCCGCAGCAACCGGAGTGCATGTGTCCTGCGCATCCCGAGTCAAAACCAAACCAGCCTAACCTACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp ACCCGCGGGTGGCTGCCAGGGCAACGGCAATGTGATTaGGCATGCAATCTGAGAAGATCTCCAGAGAAGACT +
Preference number: 6 (lower is better)
Translates to: TRGWLPGQRQCD*ACNLRRSPEKT
Trigger: AGTCTTCTCTGGAGATCTTCTCAGATTGCATGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCCGCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp GAGGGTCCCAGTTCACTAAGATCTCCTGAGGACCCCTaGCCTGCAATTTTGGAGGTTCCATCCCTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: EGPSSLRSPEDP*PAILEVPSLRV
Trigger: CACCCTCAGGGATGGAACCTCCAAAATTGCAGGCCAGGGGTCCTCAGGAGATCTTAGTGAACTGGGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CGTCGCCCTCCGTCGGTTAACACGTACTCCTTCAGTTaGCCGTTCAGGAGGAAGGTGTCACTCCAGTTCACA +
Preference number: 6 (lower is better)
Translates to: RRPPSVNTYSFS*PFRRKVSLQFT
Trigger: TGTGAACTGGAGTGACACCTTCCTCCTGAACGGCCAACTGAAGGAGTACGTGTTAACCGACGGAGGGCGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CGCTGCGGTGAAGAGAACCCTGGGAGTAGGTTAGGCTaGTTTGGTTTTGACTCGGGATGCGCAGGACACATG +
Preference number: 6 (lower is better)
Translates to: RCGEENPGSRLG*FGFDSGCAGHM
Trigger: CATGTGTCCTGCGCATCCCGAGTCAAAACCAAACCAGCCTAACCTACTCCCAGGGTTCTCTTCACCGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp GGGGCAGGATGGGTTCTCAGTTCAGCTGTCGGTCCTTaGCTGCAACAGTTGAAGCAGGTGCAGGCCTCTACT +
Preference number: 6 (lower is better)
Translates to: GAGWVLSSAVGP*LQQLKQVQAST
Trigger: AGTAGAGGCCTGCACCTGCTTCAACTGTTGCAGCAAAGGACCGACAGCTGAACTGAGAACCCATCCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp TCAGTCCAGGAGACATTAAAGGAGTCAGGTGAATATGAGTGGGCTTaGGGGGCTGGCACGCCTTCGGGTATGTCCTCGTCAGTTAGGGCC +
Preference number: 6 (lower is better)
Translates to: SVQETLKESGEYEWA*GAGTPSGMSSSVRA
Trigger: GGCCCTAACTGACGAGGACATACCCGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATTCACCTGACTCCTTTAATGTCTCCTGGACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CAGCAGTTCCTGTGGGATTCCTCCCACATAAACTGGTaGATTCACCACCAGTGGCTGGTCTCCGGACTCCGA +
Preference number: 6 (lower is better)
Translates to: QQFLWDSSHINW*IHHQWLVSGLR
Trigger: TCGGAGTCCGGAGACCAGCCACTGGTGGTGAATTCACCAGTTTATGTGGGAGGAATCCCACAGGAACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GTTCTCTGGCAGGGCCTCCATTGTCCAGGCAGATTTTaGCACACTAGCTGTGCAACCTCCATTCGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: VLWQGLHCPGRF*HTSCATSIRAG
Trigger: GCCTGCACGAATGGAGGTTGCACAGCTAGTGTGTCAAAATCTGCCTGGACAATGGAGGCCCTGCCAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp AATGGCTCTTCAACAGGACCGCTGTCCCTCGTTGCCTaGCAACGCTGCTGTAACCCCTGGTTACTCAGCAAA +
Preference number: 6 (lower is better)
Translates to: NGSSTGPLSLVA*QRCCNPWLLSK
Trigger: TTTGCTGAGTAACCAGGGGTTACAGCAGCGTTGCCAGGCAACGAGGGACAGCGGTCCTGTTGAAGAGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp GTCCAGGAGACATTAAAGGAGTCAGGTGAATATGAGTaGGCTTTGGGGGCTGGCACGCCTTCGGGTATGTCC +
Preference number: 6 (lower is better)
Translates to: VQETLKESGEYE*ALGAGTPSGMS
Trigger: GGACATACCCGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATTCACCTGACTCCTTTAATGTCTCCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CACAGATGTTGGAGTATCAGAGAACAGCTCTGGACTTaGGATCCCTTCCGGTGCCCCTGGGAGTGTCCATAC +
Preference number: 6 (lower is better)
Translates to: HRCWSIREQLWT*DPFRCPWECPY
Trigger: GTATGGACACTCCCAGGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGATACTCCAACATCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GTGATGCTTGGTGGCAGGATGCTCTCCGGAACTCCTTaGGTAGTAGCTGCAACTACCTTGCTACTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: VMLGGRMLSGTP*VVAATTLLLVA
Trigger: TGCCACCAGTAGCAAGGTAGTTGCAGCTACTACCCAAGGAGTTCCGGAGAGCATCCTGCCACCAAGCATCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GTTCTCACTGGAGGGTCCCAGTTCACTAAGATCTCCTaGGGACCCCTGGCCTGCAATTTTGGAGGTTCCATC +
Preference number: 6 (lower is better)
Translates to: VLTGGSQFTKIS*GPLACNFGGSI
Trigger: GATGGAACCTCCAAAATTGCAGGCCAGGGGTCCTCAGGAGATCTTAGTGAACTGGGACCCTCCAGTGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GGGTGGCTGCCAGGGCAACGGCAATGTGATTGGGCATaGAATCTGAGAAGATCTCCAGAGAAGACTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GWLPGQRQCDWA*NLRRSPEKTSR
Trigger: TCTGGAAGTCTTCTCTGGAGATCTTCTCAGATTGCATGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp ATTCAGCACTGGCAGAGGGCATGCGGGGTGGACGGGTaGTGTCCTCACTATAGGCTTTCAGAATGTACTTCT +
Preference number: 6 (lower is better)
Translates to: IQHWQRACGVDG*CPHYRLSECTS
Trigger: AGAAGTACATTCTGAAAGCCTATAGTGAGGACAGCACCCGTCCACCCCGCATGCCCTCTGCCAGTGCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp TGCTGGTGGGTTTGCTGGTGGAGCATCCTCCACTCGTaGAGGCTTGGAGTGCATAGCTATAGGTGGAAAAAG +
Preference number: 6 (lower is better)
Translates to: CWWVCWWSILHS*RLGVHSYRWKK
Trigger: CTTTTTCCACCTATAGCTATGCACTCCAAGCCTGCACGAGTGGAGGATGCTCCACCAGCAAACCCACCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp AGCAGCAGCAGAGCTGTGACAAAAAGTGCTTCGGTCTaGGAGTCCACATACTGCTTGGGTTGGCACGATGGA +
Preference number: 6 (lower is better)
Translates to: SSSRAVTKSASV*ESTYCLGWHDG
Trigger: TCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCTCTGCTGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp AATCCATGGGTGGAGTCGCCAGACCTCATCTGGAGTTaGTATCTGGGAGAGCCAGGAGCGTTATTACGAGCT +
Preference number: 6 (lower is better)
Translates to: NPWVESPDLIWS*YLGEPGALLRA
Trigger: AGCTCGTAATAACGCTCCTGGCTCTCCCAGATACCAACTCCAGATGAGGTCTGGCGACTCCACCCATGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp ACAGTTGGTTTAGCCCACCTCACGTCGATGGCTGTGTaGTTAAGGACACTCGCAGTGAGATTGGCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: TVGLAHLTSMAV*LRTLAVRLAPL
Trigger: GAGAGGAGCCAATCTCACTGCGAGTGTCCTTAACCACACAGCCATCGACGTGAGGTGGGCTAAACCAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GAAGCCTCCCAGCACAGCAAATCTGGTTTCCTGAGGTaGAGTACGGCATTCTGCCACAGCAGGAATCACCAA +
Preference number: 6 (lower is better)
Translates to: EASQHSKSGFLR*STAFCHSRNHQ
Trigger: TTGGTGATTCCTGCTGTGGCAGAATGCCGTACTCCACCTCAGGAAACCAGATTTGCTGTGCTGGGAGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CTGGAATCCTCCTGGAGCCATTTGTACCTCCAGATGTaGAGGGGGTTGCATCAAAGGTGCAATCTCAGGGGT +
Preference number: 6 (lower is better)
Translates to: LESSWSHLYLQM*RGLHQRCNLRG
Trigger: ACCCCTGAGATTGCACCTTTGATGCAACCCCCTCCACATCTGGAGGTACAAATGGCTCCAGGAGGATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp TCTCCTGGGAGCAGAGGCATCTATATGGCTGGCTTGTaGTGTCGCAGTTATCGGCATGACCATGGCACTGAC +
Preference number: 6 (lower is better)
Translates to: SPGSRGIYMAGL*CRSYRHDHGTD
Trigger: GTCAGTGCCATGGTCATGCCGATAACTGCGACACAACAAGCCAGCCATATAGATGCCTCTGCTCCCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp AGCTCTCCTGGGAGCAGAGGCATCTATATGGCTGGCTaGTTGTGTCGCAGTTATCGGCATGACCATGGCACT +
Preference number: 6 (lower is better)
Translates to: SSPGSRGIYMAG*LCRSYRHDHGT
Trigger: AGTGCCATGGTCATGCCGATAACTGCGACACAACAAGCCAGCCATATAGATGCCTCTGCTCCCAGGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GAGACATTAAAGGAGTCAGGTGAATATGAGTGGGCTTaGGGGGCTGGCACGCCTTCGGGTATGTCCTCGTCA +
Preference number: 6 (lower is better)
Translates to: ETLKESGEYEWA*GAGTPSGMSSS
Trigger: TGACGAGGACATACCCGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATTCACCTGACTCCTTTAATGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp AAATCCATGGGTGGAGTCGCCAGACCTCATCTGGAGTaGGTATCTGGGAGAGCCAGGAGCGTTATTACGAGC +
Preference number: 6 (lower is better)
Translates to: KSMGGVARPHLE*VSGRARSVITS
Trigger: GCTCGTAATAACGCTCCTGGCTCTCCCAGATACCAACTCCAGATGAGGTCTGGCGACTCCACCCATGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp TCACAGATGTTGGAGTATCAGAGAACAGCTCTGGACTaGGGATCCCTTCCGGTGCCCCTGGGAGTGTCCATA +
Preference number: 6 (lower is better)
Translates to: SQMLEYQRTALD*GSLPVPLGVSI
Trigger: TATGGACACTCCCAGGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGATACTCCAACATCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GGAGCGTTATTACGAGCTGGTGTAGACCAGACAACCTaGAGACTGGTTGGAGTGGCAGATGAAAGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: GALLRAGVDQTT*RLVGVADESLG
Trigger: TCCCAGGCTTTCATCTGCCACTCCAACCAGTCTTCAGGTTGTCTGGTCTACACCAGCTCGTAATAACGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GGGGTTGCATCAAAGGTGCAATCTCAGGGGTCTGTATaGATGTCCAGTCACTTGATGCACATCCCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: GVASKVQSQGSV*MSSHLMHIPGW
Trigger: CCACCCTGGGATGTGCATCAAGTGACTGGACATTCATACAGACCCCTGAGATTGCACCTTTGATGCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp CTGAGGCTCCCCATCGCAAGTGGTTGCATGAAGTCCTaGACTGTTGATGCTGTGGACTCCATTGAAGACAGA +
Preference number: 6 (lower is better)
Translates to: LRLPIASGCMKS*TVDAVDSIEDR
Trigger: TCTGTCTTCAATGGAGTCCACAGCATCAACAGTGCAGGACTTCATGCAACCACTTGCGATGGGGAGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GCTGGTGGAGCATCCTCCACTCGTGCAGGCTTGGAGTaGATAGCTATAGGTGGAAAAAGGAAGAAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: AGGASSTRAGLE*IAIGGKRKKLF
Trigger: GAAGAGCTTCTTCCTTTTTCCACCTATAGCTATGCACTCCAAGCCTGCACGAGTGGAGGATGCTCCACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp AGGTGTCACTCCAGTTCACACACACCACAGACAAATTaGTGTCCACCGAAAATGGGGCTCGGTACTGAGGCA +
Preference number: 6 (lower is better)
Translates to: RCHSSSHTPQTN*CPPKMGLGTEA
Trigger: TGCCTCAGTACCGAGCCCCATTTTCGGTGGACAGCAATTTGTCTGTGGTGTGTGTGAACTGGAGTGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GGGTGCCCAGGTAAAGTATTCTGCAGAGCAAACACTTaGTTACCTGAAGCTCAGAGCGTGGTCTGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: GCPGKVFCRANT*LPEAQSVVCLV
Trigger: CACCAAGCAGACCACGCTCTGAGCTTCAGGTAACCAAGTGTTTGCTCTGCAGAATACTTTACCTGGGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp TTCAGTGAAGCTCTCCTGGGAGCAGAGGCATCTATATaGCTGGCTTGTTGTGTCGCAGTTATCGGCATGACC +
Preference number: 6 (lower is better)
Translates to: FSEALLGAEASI*LACCVAVIGMT
Trigger: GGTCATGCCGATAACTGCGACACAACAAGCCAGCCATATAGATGCCTCTGCTCCCAGGAGAGCTTCACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp ATTGACAAATTCAGCACTGGCAGAGGGCATGCGGGGTaGACGGGTGCTGTCCTCACTATAGGCTTTCAGAAT +
Preference number: 6 (lower is better)
Translates to: IDKFSTGRGHAG*TGAVLTIGFQN
Trigger: ATTCTGAAAGCCTATAGTGAGGACAGCACCCGTCCACCCCGCATGCCCTCTGCCAGTGCTGAATTTGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GAGCAGCAAAGAACTGGGAAGGGATTTGGCTACTGGTaGCTGAACCTCTTGTGGGGCTTCTTGTGGAGTAGA +
Preference number: 6 (lower is better)
Translates to: EQQRTGKGFGYW*LNLLWGFLWSR
Trigger: TCTACTCCACAAGAAGCCCCACAAGAGGTTCAGCCACCAGTAGCCAAATCCCTTCCCAGTTCTTTGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp AGTCCATTAGGGCGAAAAGGTGCTTCCCACCTCACGTaGGCTTTCCGGGATCCCTGTGTTTTGACAAACACA +
Preference number: 6 (lower is better)
Translates to: SPLGRKGASHLT*AFRDPCVLTNT
Trigger: TGTGTTTGTCAAAACACAGGGATCCCGGAAAGCCCACGTGAGGTGGGAAGCACCTTTTCGCCCTAATGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp TCGATGGCTGTGTGGTTAAGGACACTCGCAGTGAGATaGGCTCCTCTCTCTGGAAGACCAGCTAACGTTGTC +
Preference number: 6 (lower is better)
Translates to: SMAVWLRTLAVR*APLSGRPANVV
Trigger: GACAACGTTAGCTGGTCTTCCAGAGAGAGGAGCCAATCTCACTGCGAGTGTCCTTAACCACACAGCCATCGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp TTGGCTGCAGCGGTCCTGTCCACAAAAGAGAAACAGTaGGCTGGAATCCTCCTGGAGCCATTTGTACCTCCA +
Preference number: 6 (lower is better)
Translates to: LAAAVLSTKEKQ*AGILLEPFVPP
Trigger: TGGAGGTACAAATGGCTCCAGGAGGATTCCAGCCAACTGTTTCTCTTTTGTGGACAGGACCGCTGCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp TCTGGGAGTCCACATACTGCTTGGGTTGGCACGATGGAAACTTTCTaGAAAGCTCCCACGTTCTCCAGCCTTGGGAAAAGACCTCGTGAC +
Preference number: 6 (lower is better)
Translates to: SGSPHTAWVGTMETF*KAPTFSSLGKRPRD
Trigger: GTCACGAGGTCTTTTCCCAAGGCTGGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp CATCCCAGGTCACCTCAATGCTGTATCCATTTAAGCTGCGGACTCTaGAGGGAGTTGGCACACTTTGTGGAGCTGCTCCTGTTGTACGTC +
Preference number: 6 (lower is better)
Translates to: HPRSPQCCIHLSCGL*RELAHFVELLLLYV
Trigger: GACGTACAACAGGAGCAGCTCCACAAAGTGTGCCAACTCCCTCAAGAGTCCGCAGCTTAAATGGATACAGCATTGAGGTGACCTGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp GTTCTGGTGGCAGCTGTGCTGTGTACAGTAGGACCCAGGAACTGTTaGTACAGCCCACATGTGTGCATGCACTTAGTAGAAACTGGTGGG +
Preference number: 6 (lower is better)
Translates to: VLVAAVLCTVGPRNC*YSPHVCMHLVETGG
Trigger: CCCACCAGTTTCTACTAAGTGCATGCACACATGTGGGCTGTACAAACAGTTCCTGGGTCCTACTGTACACAGCACAGCTGCCACCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp GATGCTGGTGGGTTTGCTGGTGGAGCATCCTCCACTCGTGCAGGCTaGGAGTGCATAGCTATAGGTGGAAAAAGGAAGAAGCTCTTCATC +
Preference number: 6 (lower is better)
Translates to: DAGGFAGGASSTRAG*ECIAIGGKRKKLFI
Trigger: GATGAAGAGCTTCTTCCTTTTTCCACCTATAGCTATGCACTCCAAGCCTGCACGAGTGGAGGATGCTCCACCAGCAAACCCACCAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp CTGGAATCCTCCTGGAGCCATTTGTACCTCCAGATGTGGAGGGGGTaGCATCAAAGGTGCAATCTCAGGGGTCTGTATGAATGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: LESSWSHLYLQMWRG*HQRCNLRGLYECPV
Trigger: GACTGGACATTCATACAGACCCCTGAGATTGCACCTTTGATGCAACCCCCTCCACATCTGGAGGTACAAATGGCTCCAGGAGGATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp CTTTTCCATTTGGCTGCAGCGGTCCTGTCCACAAAAGAGAAACAGTaGGCTGGAATCCTCCTGGAGCCATTTGTACCTCCAGATGTGGAG +
Preference number: 6 (lower is better)
Translates to: LFHLAAAVLSTKEKQ*AGILLEPFVPPDVE
Trigger: CTCCACATCTGGAGGTACAAATGGCTCCAGGAGGATTCCAGCCAACTGTTTCTCTTTTGTGGACAGGACCGCTGCAGCCAAATGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GGTGGACTCCAGGAGAGATTGATAGCAGAAGAACTTTaGACTTGTCCTCTGGGCGGAGGTTGCTGGAATGGA +
Preference number: 6 (lower is better)
Translates to: GGLQERLIAEEL*TCPLGGGCWNG
Trigger: TCCATTCCAGCAACCTCCGCCCAGAGGACAAGTTCAAAGTTCTTCTGCTATCAATCTCTCCTGGAGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp TGCAATCTCAGGGGTCTGTATGAATGTCCAGTCACTTaGTGCACATCCCAGGGTGGTGCACGCTTGAATTCG +
Preference number: 6 (lower is better)
Translates to: CNLRGLYECPVT*CTSQGGARLNS
Trigger: CGAATTCAAGCGTGCACCACCCTGGGATGTGCATCAAGTGACTGGACATTCATACAGACCCCTGAGATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GTGGGTGTCTGTGAATGTGGTGCGTTCCTTAGTCACTaGGCTGAAATCCTTGATGGCGTTCATCAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: VGVCECGAFLSH*AEILDGVHQVL
Trigger: GAGGACCTGATGAACGCCATCAAGGATTTCAGCTCAGTGACTAAGGAACGCACCACATTCACAGACACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp CATCCCAGGTCACCTCAATGCTGTATCCATTTAAGCTaGGGACTCTTGAGGGAGTTGGCACACTTTGTGGAG +
Preference number: 6 (lower is better)
Translates to: HPRSPQCCIHLS*GLLRELAHFVE
Trigger: CTCCACAAAGTGTGCCAACTCCCTCAAGAGTCCGCAGCTTAAATGGATACAGCATTGAGGTGACCTGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp AGCAAATCTGGTTTCCTGAGGTGGAGTACGGCATTCTaGCACAGCAGGAATCACCAATGCCAACAGAAACCC +
Preference number: 6 (lower is better)
Translates to: SKSGFLRWSTAF*HSRNHQCQQKP
Trigger: GGGTTTCTGTTGGCATTGGTGATTCCTGCTGTGGCAGAATGCCGTACTCCACCTCAGGAAACCAGATTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp CACCACAACACTCTAAATCGTTGCTCACAATCTGTCTaGCACAGCACTTCTGGCCATGGCCATCATGAAGCC +
Preference number: 6 (lower is better)
Translates to: HHNTLNRCSQSV*HSTSGHGHHEA
Trigger: GGCTTCATGATGGCCATGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCAACGATTTAGAGTGTTGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GTCACACCTGCCACAATGTTCTGTGGCTTCCATAGATaGTGGGCAGAGGATCCTGCACTCTTTGGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: VTPATMFCGFHR*WAEDPALFGFL
Trigger: AAGGAAACCAAAGAGTGCAGGATCCTCTGCCCAGCATCTATGGAAGCCACAGAACATTGTGGCAGGTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp CCTGGAGCCATTTGTACCTCCAGATGTGGAGGGGGTTaGATCAAAGGTGCAATCTCAGGGGTCTGTATGAAT +
Preference number: 6 (lower is better)
Translates to: PGAICTSRCGGG*IKGAISGVCMN
Trigger: ATTCATACAGACCCCTGAGATTGCACCTTTGATGCAACCCCCTCCACATCTGGAGGTACAAATGGCTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp TTATTGCATTTCAACCAGTCCCCTCAGTGTGACAAATaGCTCTTCAACAGGACCGCTGTCCCTCGTTGCCTG +
Preference number: 6 (lower is better)
Translates to: LLHFNQSPQCDK*LFNRTAVPRCL
Trigger: CAGGCAACGAGGGACAGCGGTCCTGTTGAAGAGCCATTTGTCACACTGAGGGGACTGGTTGAAATGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp AGTGCTTCGGTCTGGGAGTCCACATACTGCTTGGGTTaGCACGATGGAAACTTTCTTGAAAGCTCCCACGTT +
Preference number: 6 (lower is better)
Translates to: SASVWESTYCLG*HDGNFLESSHV
Trigger: AACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp TTGGTATCTGGGAGAGCCAGGAGCGTTATTACGAGCTaGTGTAGACCAGACAACCTGAAGACTGGTTGGAGT +
Preference number: 6 (lower is better)
Translates to: LVSGRARSVITS*CRPDNLKTGWS
Trigger: ACTCCAACCAGTCTTCAGGTTGTCTGGTCTACACCAGCTCGTAATAACGCTCCTGGCTCTCCCAGATACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp TCTAGAAATCCATGGGTGGAGTCGCCAGACCTCATCTaGAGTTGGTATCTGGGAGAGCCAGGAGCGTTATTA +
Preference number: 6 (lower is better)
Translates to: SRNPWVESPDLI*SWYLGEPGALL
Trigger: TAATAACGCTCCTGGCTCTCCCAGATACCAACTCCAGATGAGGTCTGGCGACTCCACCCATGGATTTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp TATAATCACAGATGTTGGAGTATCAGAGAACAGCTCTaGACTTGGGATCCCTTCCGGTGCCCCTGGGAGTGT +
Preference number: 6 (lower is better)
Translates to: YNHRCWSIREQL*TWDPFRCPWEC
Trigger: ACACTCCCAGGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGATACTCCAACATCTGTGATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp TGCAGCGGTCCTGTCCACAAAAGAGAAACAGTTGGCTaGAATCCTCCTGGAGCCATTTGTACCTCCAGATGT +
Preference number: 6 (lower is better)
Translates to: CSGPVHKRETVG*NPPGAICTSRC
Trigger: ACATCTGGAGGTACAAATGGCTCCAGGAGGATTCCAGCCAACTGTTTCTCTTTTGTGGACAGGACCGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp ATCAGGTCCTCTTCATCCACATACAGTCCACTGTTGTaGCCCATGATGGCTTCCCACAGTGAGTTGTCCATC +
Preference number: 6 (lower is better)
Translates to: IRSSSSTYSPLL*PMMASHSELSI
Trigger: GATGGACAACTCACTGTGGGAAGCCATCATGGGCCACAACAGTGGACTGTATGTGGATGAAGAGGACCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp GCAGAATTGCTATGGGCGTTAGGATGCAGATCATTCTaGTCTGGTGTGATGCAGCTACTGAGGCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: AELLWALGCRSF*SGVMQLLRPAE
Trigger: CTCAGCAGGCCTCAGTAGCTGCATCACACCAGACAAGAATGATCTGCATCCTAACGCCCATAGCAATTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp TCACCTCAATGCTGTATCCATTTAAGCTGCGGACTCTaGAGGGAGTTGGCACACTTTGTGGAGCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SPQCCIHLSCGL*RELAHFVELLL
Trigger: CAGGAGCAGCTCCACAAAGTGTGCCAACTCCCTCAAGAGTCCGCAGCTTAAATGGATACAGCATTGAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp AGCAAGCCTGTCAATATGCCTGTGAGGTTGCTTGTATaGACAAATTCAGCACTGGCAGAGGGCATGCGGGGT +
Preference number: 6 (lower is better)
Translates to: SKPVNMPVRLLV*TNSALAEGMRG
Trigger: ACCCCGCATGCCCTCTGCCAGTGCTGAATTTGTCAATACAAGCAACCTCACAGGCATATTGACAGGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp GTTCGATTTTCCACCAGTGGGCCCAGAGCACAACCTTaGGCCGTGCATGCTTGGACTCTGAAGGAATGTAAA +
Preference number: 6 (lower is better)
Translates to: VRFSTSGPRAQP*AVHAWTLKECK
Trigger: TTTACATTCCTTCAGAGTCCAAGCATGCACGGCCAAAGGTTGTGCTCTGGGCCCACTGGTGGAAAATCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp TCCTGGAGCCATTTGTACCTCCAGATGTGGAGGGGGTaGCATCAAAGGTGCAATCTCAGGGGTCTGTATGAA +
Preference number: 6 (lower is better)
Translates to: SWSHLYLQMWRG*HQRCNLRGLYE
Trigger: TTCATACAGACCCCTGAGATTGCACCTTTGATGCAACCCCCTCCACATCTGGAGGTACAAATGGCTCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp AGAGCTGTGACAAAAAGTGCTTCGGTCTGGGAGTCCACATACTGCTaGGGTTGGCACGATGGAAACTTTCTTGAAAGCTCCCACGTTCTC +
Preference number: 6 (lower is better)
Translates to: RAVTKSASVWESTYC*GWHDGNFLESSHVL
Trigger: GAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp CGATTGTACACCACTCCTTCTTCTCCACCACAACACTCTAAATCGTaGCTCACAATCTGTCTGCCACAGCACTTCTGGCCATGGCCATCA +
Preference number: 6 (lower is better)
Translates to: RLYTTPSSPPQHSKS*LTICLPQHFWPWPS
Trigger: TGATGGCCATGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCAACGATTTAGAGTGTTGTGGTGGAGAAGAAGGAGTGGTGTACAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp AGAAACATAGGATATCACAGGTGGAGAGAGACCTTCTGGAGGTGCTaGCAATGTCCTCACCACATTCCAAGAGCTACAGGTATGCCCAGC +
Preference number: 6 (lower is better)
Translates to: RNIGYHRWRETFWRC*QCPHHIPRATGMPS
Trigger: GCTGGGCATACCTGTAGCTCTTGGAATGTGGTGAGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTATGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CACATACTGCTTGGGTTGGCACGATGGAAACTTTCTTaGAAGCTCCCACGTTCTCCAGCCTTGGGAAAAGAC +
Preference number: 6 (lower is better)
Translates to: HILLGLARWKLS*KLPRSPALGKD
Trigger: GTCTTTTCCCAAGGCTGGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp TGCCAGGGCAACGGCAATGTGATTGGGCATGCAATCTaGGAAGATCTCCAGAGAAGACTTCCAGAATCTCTC +
Preference number: 6 (lower is better)
Translates to: CQGNGNVIGHAI*EDLQRRLPESL
Trigger: GAGAGATTCTGGAAGTCTTCTCTGGAGATCTTCTCAGATTGCATGCCCAATCACATTGCCGTTGCCCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp TGGGGCTTCTTGTGGAGTAGAGATGTTCAATGCATGTaGGCTCTCAGTACAGCCAGCCAAAGTGCAAGCAGT +
Preference number: 6 (lower is better)
Translates to: WGFLWSRDVQCM*ALSTASQSASS
Trigger: ACTGCTTGCACTTTGGCTGGCTGTACTGAGAGCTCACATGCATTGAACATCTCTACTCCACAAGAAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp AACCTGCCTGATCTGGTACTCTTTAATGACGCCGTTTaGTTTCTCAGGGACACTCCAGCTCAGATGCAGAGC +
Preference number: 6 (lower is better)
Translates to: NLPDLVLFNDAV*FLRDTPAQMQS
Trigger: GCTCTGCATCTGAGCTGGAGTGTCCCTGAGAAATCAAACGGCGTCATTAAAGAGTACCAGATCAGGCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp ATTGGGAGATTCTGGCTTTGTCCAATTCAACAGAACTaGATGAGCACTCGTGGCTTGAGCCCAAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: IGRFWLCPIQQN*MSTRGLSPRSW
Trigger: CCAGCTCCTTGGGCTCAAGCCACGAGTGCTCATTCAGTTCTGTTGAATTGGACAAAGCCAGAATCTCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CATGGTTTGCAGCCACAACACCAATGCGATATGTTGTaGATGGTTCTAACCCGTACAGGTGGGCTTGATGGC +
Preference number: 6 (lower is better)
Translates to: HGLQPQHQCDML*MVLTRTGGLDG
Trigger: GCCATCAAGCCCACCTGTACGGGTTAGAACCATTCACAACATATCGCATTGGTGTTGTGGCTGCAAACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GAATACTTTCAGCAGCAGCAGAGCTGTGACAAAAAGTaGTTCGGTCTGGGAGTCCACATACTGCTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: EYFQQQQSCDKK*FGLGVHILLGL
Trigger: CAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGTCACAGCTCTGCTGCTGCTGAAAGTATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp TTCACCACCAGTGGCTGGTCTCCGGACTCCGATGCATaGTTCATCAGTCCATTCACACTTGCTGATATGAAA +
Preference number: 6 (lower is better)
Translates to: FTTSGWSPDSDA*FISPFTLADMK
Trigger: TTTCATATCAGCAAGTGTGAATGGACTGATGAAGCATGCATCGGAGTCCGGAGACCAGCCACTGGTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp AGCGTAATACCCAGAGCAGCACTGATGATTTGGTTGTaGCTCCTGTATTCGGCCACCACAACAAACTCCAGT +
Preference number: 6 (lower is better)
Translates to: SVIPRAALMIWL*LLYSATTTNSS
Trigger: ACTGGAGTTTGTTGTGGTGGCCGAATACAGGAGGCACAACCAAATCATCAGTGCTGCTCTGGGTATTACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp CCACTCCTTCTTCTCCACCACAACACTCTAAATCGTTaGTCACAATCTGTCTGCCACAGCACTTCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: PLLLLHHNTLNR*SQSVCHSTSGH
Trigger: ATGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCAACGATTTAGAGTGTTGTGGTGGAGAAGAAGGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GATATCACAGGTGGAGAGAGACCTTCTGGAGGTGCTTaGAATGTCCTCACCACATTCCAAGAGCTACAGGTA +
Preference number: 6 (lower is better)
Translates to: DITGGERPSGGA*NVLTTFQELQV
Trigger: TACCTGTAGCTCTTGGAATGTGGTGAGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCACCTGTGATATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CAAAAAGTGCTTCGGTCTGGGAGTCCACATACTGCTTaGGTTGGCACGATGGAAACTTTCTTGAAAGCTCCC +
Preference number: 6 (lower is better)
Translates to: QKVLRSGSPHTA*VGTMETFLKAP
Trigger: GGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp CACCAGTTGTATGGCATGAGCATGGCAGGCAGCCAGTaGCATTGCCTGGAGAAATATAAAAACCTGGTTGAC +
Preference number: 6 (lower is better)
Translates to: HQLYGMSMAGSQ*HCLEKYKNLVD
Trigger: GTCAACCAGGTTTTTATATTTCTCCAGGCAATGCCACTGGCTGCCTGCCATGCTCATGCCATACAACTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp AATGGTCTTTGCATTGGTCACAACGTTGCCCAGCAATaGAAGCATCTTGGCAAACACACTGACCAGTCAGGC +
Preference number: 6 (lower is better)
Translates to: NGLCIGHNVAQQ*KHLGKHTDQSG
Trigger: GCCTGACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp AATCTCATAGCTAAGTATGTCTCCGTTCTGGATGAGTaGGGGTTTCCAAGTGACCTGGACTGCATCGGGTTC +
Preference number: 6 (lower is better)
Translates to: NLIAKYVSVLDE*GFPSDLDCIGF
Trigger: GAACCCGATGCAGTCCAGGTCACTTGGAAACCCCCACTCATCCAGAACGGAGACATACTTAGCTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp ACACCTGCCACAATGTTCTGTGGCTTCCATAGATGCTaGGCAGAGGATCCTGCACTCTTTGGTTTCCTTCAT +
Preference number: 6 (lower is better)
Translates to: TPATMFCGFHRC*AEDPALFGFLH
Trigger: ATGAAGGAAACCAAAGAGTGCAGGATCCTCTGCCCAGCATCTATGGAAGCCACAGAACATTGTGGCAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CAGGGTTACGTCTTCTGGGTTTCCATCCTTTACAGGTaGGTGTCTGTGAATGTGGTGCGTTCCTTAGTCACT +
Preference number: 6 (lower is better)
Translates to: QGYVFWVSILYR*VSVNVVRSLVT
Trigger: AGTGACTAAGGAACGCACCACATTCACAGACACCCACCTGTAAAGGATGGAAACCCAGAAGACGTAACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp CCACATACTGCTTGGGTTGGCACGATGGAAACTTTCTaGAAAGCTCCCACGTTCTCCAGCCTTGGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: PHTAWVGTMETF*KAPTFSSLGKR
Trigger: TCTTTTCCCAAGGCTGGAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp CCCCCGCTAGTACACGCCTGTACAGAAAAATCGTACTaGGCAAATGGAACCAGATTCCAGATGGTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: PPLVHACTEKSY*ANGTRFQMVAE
Trigger: CTCAGCTACCATCTGGAATCTGGTTCCATTTGCCAAGTACGATTTTTCTGTACAGGCGTGTACTAGCGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp AGCGGGACATCCCTCCCAGCTGTTATACACGTTGATTaGTTCTTCAGAACTCTGCCAATCCAGAGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: SGTSLPAVIHVD*FFRTLPIQRFP
Trigger: TGGGAACCTCTGGATTGGCAGAGTTCTGAAGAACAAATCAACGTGTATAACAGCTGGGAGGGATGTCCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307340.8
ENST00000463147.1
ENST00000481786.1
ENST00000674083.1
CDS CAA 72 bp TCTAGCGTAATACCCAGAGCAGCACTGATGATTTGGTaGTGCCTCCTGTATTCGGCCACCACAACAAACTCC +
Preference number: 6 (lower is better)
Translates to: SSVIPRAALMIW*CLLYSATTTNS
Trigger: GGAGTTTGTTGTGGTGGCCGAATACAGGAGGCACAACCAAATCATCAGTGCTGCTCTGGGTATTACGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp CCACAGCAGGAATCACCAATGCCAACAGAAACCCGATaGTGCTGTTCATCTGGACAGCATACTTCACCTGGT +
Preference number: 6 (lower is better)
Translates to: PQQESPMPTETR*CCSSGQHTSPG
Trigger: ACCAGGTGAAGTATGCTGTCCAGATGAACAGCACAATCGGGTTTCTGTTGGCATTGGTGATTCCTGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp ACCACTCCTTCTTCTCCACCACAACACTCTAAATCGTaGCTCACAATCTGTCTGCCACAGCACTTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: TTPSSPPQHSKS*LTICLPQHFWP
Trigger: TGGCCAGAAGTGCTGTGGCAGACAGATTGTGAGCAACGATTTAGAGTGTTGTGGTGGAGAAGAAGGAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp TTTCCCTCCAAACATTTATTGCACTGTCTCCCTTCAACATTGGGCTaGCAGATGCACTGCCCTGTCTTAGCATTACAGACAGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: FPSKHLLHCLPSTLG*QMHCPVLALQTVPG
Trigger: CCCTGGGACTGTCTGTAATGCTAAGACAGGGCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp GGCGGAGGTTGCTGGAATGGAGTTTTGCTGCAACCCAATAGATTGTaGACATCCAAGTGGCTTGCACTGGGAACACAAGCATCACACTTT +
Preference number: 6 (lower is better)
Translates to: GGGCWNGVLLQPNRL*TSKWLALGTQASHF
Trigger: AAAGTGTGATGCTTGTGTTCCCAGTGCAAGCCACTTGGATGTCAACAATCTATTGGGTTGCAGCAAAACTCCATTCCAGCAACCTCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp ACGGAGAAGGCCAGAGGTGTTACACTTCCATCATTGAGTAAGACATaGTACTCCACAGGAATTTCGGGGATGAGGATCCCTGGTGGTATC +
Preference number: 6 (lower is better)
Translates to: TEKARGVTLPSLSKT*YSTGISGMRIPGGI
Trigger: GATACCACCAGGGATCCTCATCCCCGAAATTCCTGTGGAGTACAATGTCTTACTCAATGATGGAAGTGTAACACCTCTGGCCTTCTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp GTGTCTGTGAATGTGGTGCGTTCCTTAGTCACTGAGCTGAAATCCTaGATGGCGTTCATCAGGTCCTCTTCATCCACATACAGTCCACTG +
Preference number: 6 (lower is better)
Translates to: VSVNVVRSLVTELKS*MAFIRSSSSTYSPL
Trigger: CAGTGGACTGTATGTGGATGAAGAGGACCTGATGAACGCCATCAAGGATTTCAGCTCAGTGACTAAGGAACGCACCACATTCACAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GAGGAACTACAGGTCCAGGTTTGTCCTCTGCGGTCATaGATGGAATCCAAGAACTATGTGCACTGCCAAATC +
Preference number: 6 (lower is better)
Translates to: EELQVQVCPLRS*MESKNYVHCQI
Trigger: GATTTGGCAGTGCACATAGTTCTTGGATTCCATTCATGACCGCAGAGGACAAACCTGGACCTGTAGTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CAGTCCACTGTTGTGGCCCATGATGGCTTCCCACAGTaGGTTGTCCATCAAGACTTTCTTGTCTTGAATGTC +
Preference number: 6 (lower is better)
Translates to: QSTVVAHDGFPQ*VVHQDFLVLNV
Trigger: GACATTCAAGACAAGAAAGTCTTGATGGACAACTCACTGTGGGAAGCCATCATGGGCCACAACAGTGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GTGACAAAAAGTGCTTCGGTCTGGGAGTCCACATACTaGTTGGGTTGGCACGATGGAAACTTTCTTGAAAGC +
Preference number: 6 (lower is better)
Translates to: VTKSASVWESTY*LGWHDGNFLES
Trigger: GCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp CATCCACTGTCCCAGAGGTATTGCAGTTACAGGGACTaGAGCCATCAGGATCCAACTCTTGTAGATTGTAGA +
Preference number: 6 (lower is better)
Translates to: HPLSQRYCSYRD*SHQDPTLVDCR
Trigger: TCTACAATCTACAAGAGTTGGATCCTGATGGCTGCAGTCCCTGTAACTGCAATACCTCTGGGACAGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp ATCCAGATTGACTCTGACAGCACCGCTGGACACAGATaGCAAGTTAACGACAGCACCCCGTGTAAATTTAAC +
Preference number: 6 (lower is better)
Translates to: IQIDSDSTAGHR*QVNDSTPCKFN
Trigger: GTTAAATTTACACGGGGTGCTGTCGTTAACTTGGCATCTGTGTCCAGCGGTGCTGTCAGAGTCAATCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp CAGCAGGAATCACCAATGCCAACAGAAACCCGATTGTaGTGTTCATCTGGACAGCATACTTCACCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: QQESPMPTETRL*CSSGQHTSPGR
Trigger: TCTACCAGGTGAAGTATGCTGTCCAGATGAACAGCACAATCGGGTTTCTGTTGGCATTGGTGATTCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp TCAGTGGTGTCAGTGTGGATGAGACCTTTCCCAACCTaGCTGATCTGGTACTCTTTAATGACGCCGTTTGAT +
Preference number: 6 (lower is better)
Translates to: SVVSVWMRPFPT*LIWYSLMTPFD
Trigger: ATCAAACGGCGTCATTAAAGAGTACCAGATCAGGCAGGTTGGGAAAGGTCTCATCCACACTGACACCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp ATAGGATATCACAGGTGGAGAGAGACCTTCTGGAGGTaGTTGCAATGTCCTCACCACATTCCAAGAGCTACA +
Preference number: 6 (lower is better)
Translates to: IGYHRWRETFWR*LQCPHHIPRAT
Trigger: TGTAGCTCTTGGAATGTGGTGAGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp TTCCAGGTGATTTCTATTGATTCTGAGCCTGTGACTTaGAATGTTGGAGAGTCCATGTTCTCTGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: FQVISIDSEPVT*NVGESMFSGRA
Trigger: GGCCCTGCCAGAGAACATGGACTCTCCAACATTGCAAGTCACAGGCTCAGAATCAATAGAAATCACCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp TCAGTGTGGATGAGACCTTTCCCAACCTGCCTGATCTaGTACTCTTTAATGACGCCGTTTGATTTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: SVWMRPFPTCLI*YSLMTPFDFSG
Trigger: CCCTGAGAAATCAAACGGCGTCATTAAAGAGTACCAGATCAGGCAGGTTGGGAAAGGTCTCATCCACACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GCTTTGTCCAATTCAACAGAACTGAATGAGCACTCGTaGCTTGAGCCCAAGGAGCTGGAAAATCTTGAGGTG +
Preference number: 6 (lower is better)
Translates to: ALSNSTELNEHS*LEPKELENLEV
Trigger: CACCTCAAGATTTTCCAGCTCCTTGGGCTCAAGCCACGAGTGCTCATTCAGTTCTGTTGAATTGGACAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp ACAAAAAGTGCTTCGGTCTGGGAGTCCACATACTGCTaGGGTTGGCACGATGGAAACTTTCTTGAAAGCTCC +
Preference number: 6 (lower is better)
Translates to: TKSASVWESTYC*GWHDGNFLESS
Trigger: GGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTCCCAGACCGAAGCACTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GCATTGGTCACAACGTTGCCCAGCAATGGAAGCATCTaGGCAAACACACTGACCAGTCAGGCTATTACAGAT +
Preference number: 6 (lower is better)
Translates to: ALVTTLPSNGSI*ANTLTSQAITD
Trigger: ATCTGTAATAGCCTGACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp CCAACGGAGAAGGCCAGAGGTGTTACACTTCCATCATaGAGTAAGACATTGTACTCCACAGGAATTTCGGGG +
Preference number: 6 (lower is better)
Translates to: PTEKARGVTLPS*SKTLYSTGISG
Trigger: CCCCGAAATTCCTGTGGAGTACAATGTCTTACTCAATGATGGAAGTGTAACACCTCTGGCCTTCTCCGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp GTCACAGGGTTTGCAAACATCTATGGCCGAAGGATCTGCACCAACTaGTCGGAAAAAGTAATCCTTGCACAGCTCACAGTTCCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: VTGFANIYGRRICTN*SEKVILAQLTVPSC
Trigger: ACAGGAAGGAACTGTGAGCTGTGCAAGGATTACTTTTTCCGACAAGTTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAACCCTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp TTCAGTTCTTCAGGTGGAAACCACCTAAGATGGATTGTTGTGCTGTaGATTCCTTTAACCAGAGGTGGCCTCAGTTGTGCTGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: FSSSGGNHLRWIVVL*IPLTRGGLSCAGAA
Trigger: AGCAGCACCAGCACAACTGAGGCCACCTCTGGTTAAAGGAATCAACAGCACAACAATCCATCTTAGGTGGTTTCCACCTGAAGAACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp GGAGTGTCCATACAGTCTGGGACTCTGGTGAAAGGGAACATCCTTTaGAAGTGCAGGCTTCTACCTGAAACTTATAGGCAGTGTATGGGT +
Preference number: 6 (lower is better)
Translates to: GVSIQSGTLVKGNIL*KCRLLPETYRQCMG
Trigger: ACCCATACACTGCCTATAAGTTTCAGGTAGAAGCCTGCACTTCAAAAGGATGTTCCCTTTCACCAGAGTCCCAGACTGTATGGACACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp GGCATTCTGCCACAGCAGGAATCACCAATGCCAACAGAAACCCGATaGTGCTGTTCATCTGGACAGCATACTTCACCTGGTAGAATTCTA +
Preference number: 6 (lower is better)
Translates to: GILPQQESPMPTETR*CCSSGQHTSPGRIL
Trigger: TAGAATTCTACCAGGTGAAGTATGCTGTCCAGATGAACAGCACAATCGGGTTTCTGTTGGCATTGGTGATTCCTGCTGTGGCAGAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp CTCCTCACTGCCACCCAGGAAAAGCAAGTTTCCATTACGACTCAATaGATATTGAGAAACGAGGCCATTGGGCTTTTCTGGCAGACTCCA +
Preference number: 6 (lower is better)
Translates to: LLTATQEKQVSITTQ*ILRNEAIGLFWQTP
Trigger: TGGAGTCTGCCAGAAAAGCCCAATGGCCTCGTTTCTCAATATCAATTGAGTCGTAATGGAAACTTGCTTTTCCTGGGTGGCAGTGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp ATAAAACTTGCAGAATTGCTATGGGCGTTAGGATGCAGATCATTCTaGTCTGGTGTGATGCAGCTACTGAGGCCTGCTGAGAAAAGGGCA +
Preference number: 6 (lower is better)
Translates to: IKLAELLWALGCRSF*SGVMQLLRPAEKRA
Trigger: TGCCCTTTTCTCAGCAGGCCTCAGTAGCTGCATCACACCAGACAAGAATGATCTGCATCCTAACGCCCATAGCAATTCTGCAAGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp CTGAGGATCAAATCCAAAGTAATGGTCTTTGCATTGGTCACAACGTaGCCCAGCAATGGAAGCATCTTGGCAAACACACTGACCAGTCAG +
Preference number: 6 (lower is better)
Translates to: LRIKSKVMVFALVTT*PSNGSILANTLTSQ
Trigger: CTGACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCATTACTTTGGATTTGATCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp ACGTTTGCTTTGCACTTGCACTGGCCTGAATTTTGGTaGCAGGTAATATCTCCATCCACTGTCCCAGAGGTA +
Preference number: 6 (lower is better)
Translates to: TFALHLHWPEFW*QVISPSTVPEV
Trigger: TACCTCTGGGACAGTGGATGGAGATATTACCTGTCACCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp GTACTTGGCAAATGGAACCAGATTCCAGATGGTAGCTaGGGTTTCATGACCTTCGTAGGAAACACATGGCTG +
Preference number: 6 (lower is better)
Translates to: VLGKWNQIPDGS*GFMTFVGNTWL
Trigger: CAGCCATGTGTTTCCTACGAAGGTCATGAAACCTCAGCTACCATCTGGAATCTGGTTCCATTTGCCAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp AGTACGAAGAGAGGGGAAAGACTGAAGGAGGGATCATaGATACAGGTGCTGATTCTCCCGTTCTTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: STKRGERLKEGS*IQVLILPFFLR
Trigger: TCTCAGAAAGAACGGGAGAATCAGCACCTGTATTCATGATCCCTCCTTCAGTCTTTCCCCTCTCTTCGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp TCCTGTTGTACGTCCTCGACTCCAATCACTATATACTaGACCTCCTTCATGCGAGGCTATCACTCGATACAG +
Preference number: 6 (lower is better)
Translates to: SCCTSSTPITIY*TSFMRGYHSIQ
Trigger: CTGTATCGAGTGATAGCCTCGCATGAAGGAGGTTCAGTATATAGTGATTGGAGTCGAGGACGTACAACAGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp ACTCTCTGTGCACCCTCCAAGGTACCCATTACCCCCTaGGCAAGCAACAATGGTGACAGAATAATTAGTGAA +
Preference number: 6 (lower is better)
Translates to: TLCAPSKVPITP*ASNNGDRIISE
Trigger: TTCACTAATTATTCTGTCACCATTGTTGCTTGCTCAGGGGGTAATGGGTACCTTGGAGGGTGCACAGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CAACGGAGAAGGCCAGAGGTGTTACACTTCCATCATTaGGTAAGACATTGTACTCCACAGGAATTTCGGGGA +
Preference number: 6 (lower is better)
Translates to: QRRRPEVLHFHH*VRHCTPQEFRG
Trigger: TCCCCGAAATTCCTGTGGAGTACAATGTCTTACTCAATGATGGAAGTGTAACACCTCTGGCCTTCTCCGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp GTCACAGGGTTTGCAAACATCTATGGCCGAAGGATCTaGACCAACTTGTCGGAAAAAGTAATCCTTGCACAG +
Preference number: 6 (lower is better)
Translates to: VTGFANIYGRRI*TNLSEKVILAQ
Trigger: CTGTGCAAGGATTACTTTTTCCGACAAGTTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAACCCTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp GATTGTAGAATCCATTCTGGCACTGATTGCACTGCCTaGCAGACACGTGTCTCTTACAATTACACTGTCCTC +
Preference number: 6 (lower is better)
Translates to: DCRIHSGTDCTA*QTRVSYNYTVL
Trigger: GAGGACAGTGTAATTGTAAGAGACACGTGTCTGGCAGGCAGTGCAATCAGTGCCAGAATGGATTCTACAATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp CAACTACCTTGCTACTGGTGGCACAGCCAGCAACCGTaGAAGCTTTCAGCTGATATGAATATTCCTGAAATG +
Preference number: 6 (lower is better)
Translates to: QLPCYWWHSQQP*KLSADMNIPEM
Trigger: CATTTCAGGAATATTCATATCAGCTGAAAGCTTGCACGGTTGCTGGCTGTGCCACCAGTAGCAAGGTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CAGAAGGATTGGAAAATAACTCTAGAAATCCATGGGTaGAGTCGCCAGACCTCATCTGGAGTTGGTATCTGG +
Preference number: 6 (lower is better)
Translates to: QKDWKITLEIHG*SRQTSSGVGIW
Trigger: CCAGATACCAACTCCAGATGAGGTCTGGCGACTCCACCCATGGATTTCTAGAGTTATTTTCCAATCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp AATTCTAGCGTAATACCCAGAGCAGCACTGATGATTTaGTTGTGCCTCCTGTATTCGGCCACCACAACAAAC +
Preference number: 6 (lower is better)
Translates to: NSSVIPRAALMI*LCLLYSATTTN
Trigger: GTTTGTTGTGGTGGCCGAATACAGGAGGCACAACCAAATCATCAGTGCTGCTCTGGGTATTACGCTAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp AGAAACATAGGATATCACAGGTGGAGAGAGACCTTCTaGAGGTGCTTGCAATGTCCTCACCACATTCCAAGA +
Preference number: 6 (lower is better)
Translates to: RNIGYHRWRETF*RCLQCPHHIPR
Trigger: TCTTGGAATGTGGTGAGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTATGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GTTGCTGGCAGTTACTGTGTAGCTATACTCCACACCTaGGGTGAGAGTAAAATCACGATAGCGTGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: VAGSYCVAILHT*GESKITIACFQ
Trigger: TTGGAAACACGCTATCGTGATTTTACTCTCACCCCAGGTGTGGAGTATAGCTACACAGTAACTGCCAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GTTAGGACCAAGCCAAGTCCAGTAGAGGTATCATATTaGATCAACGGCGTCTTAACACTTCCTTCGTCAGTC +
Preference number: 6 (lower is better)
Translates to: VRTKPSPVEVSY*INGVLTLPSSV
Trigger: GACTGACGAAGGAAGTGTTAAGACGCCGTTGATCCAATATGATACCTCTACTGGACTTGGCTTGGTCCTAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp CCATTTCTAGTGCCAACTGTATCACAGTCACAGGGTTaGCAAACATCTATGGCCGAAGGATCTGCACCAACT +
Preference number: 6 (lower is better)
Translates to: PFLVPTVSQSQG*QTSMAEGSAPT
Trigger: AGTTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAACCCTGTGACTGTGATACAGTTGGCACTAGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp TGCTGGAATGGAGTTTTGCTGCAACCCAATAGATTGTaGACATCCAAGTGGCTTGCACTGGGAACACAAGCA +
Preference number: 6 (lower is better)
Translates to: CWNGVLLQPNRL*TSKWLALGTQA
Trigger: TGCTTGTGTTCCCAGTGCAAGCCACTTGGATGTCAACAATCTATTGGGTTGCAGCAAAACTCCATTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GGTTGCTGGAATGGAGTTTTGCTGCAACCCAATAGATaGTTGACATCCAAGTGGCTTGCACTGGGAACACAA +
Preference number: 6 (lower is better)
Translates to: GCWNGVLLQPNR*LTSKWLALGTQ
Trigger: TTGTGTTCCCAGTGCAAGCCACTTGGATGTCAACAATCTATTGGGTTGCAGCAAAACTCCATTCCAGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp TCAGGTGGAAACCACCTAAGATGGATTGTTGTGCTGTaGATTCCTTTAACCAGAGGTGGCCTCAGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: SGGNHLRWIVVL*IPLTRGGLSCA
Trigger: AGCACAACTGAGGCCACCTCTGGTTAAAGGAATCAACAGCACAACAATCCATCTTAGGTGGTTTCCACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GGTTCGATCTTTGACAAGAGGACTCAAAATACCCCCTaGGCTGTTGCTGGCAGTTACTGTGTAGCTATACTC +
Preference number: 6 (lower is better)
Translates to: GSIFDKRTQNTP*AVAGSYCVAIL
Trigger: GAGTATAGCTACACAGTAACTGCCAGCAACAGCCAAGGGGGTATTTTGAGTCCTCTTGTCAAAGATCGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp AATGTGGTGCGTTCCTTAGTCACTGAGCTGAAATCCTaGATGGCGTTCATCAGGTCCTCTTCATCCACATAC +
Preference number: 6 (lower is better)
Translates to: NVVRSLVTELKS*MAFIRSSSSTY
Trigger: GTATGTGGATGAAGAGGACCTGATGAACGCCATCAAGGATTTCAGCTCAGTGACTAAGGAACGCACCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp AGAATGCTACCATTTCTAGTGCCAACTGTATCACAGTCACAGGGTTaGCAAACATCTATGGCCGAAGGATCTGCACCAACTTGTCGGAAA +
Preference number: 6 (lower is better)
Translates to: RMLPFLVPTVSQSQG*QTSMAEGSAPTCRK
Trigger: TTTCCGACAAGTTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAACCCTGTGACTGTGATACAGTTGGCACTAGAAATGGTAGCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp TGGAGAAATATAAAAACCTGGTTGACACTGATTACACCTTCTTCCTaGACGATTAGGCACACACAGGCACTGGCCACTGATTGGGTCACA +
Preference number: 6 (lower is better)
Translates to: WRNIKTWLTLITPSS*TIRHTQALATDWVT
Trigger: TGTGACCCAATCAGTGGCCAGTGCCTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAATCAGTGTCAACCAGGTTTTTATATTTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp ATGGTCTTTGCATTGGTCACAACGTTGCCCAGCAATGGAAGCATCTaGGCAAACACACTGACCAGTCAGGCTATTACAGATGTGATTAAC +
Preference number: 6 (lower is better)
Translates to: MVFALVTTLPSNGSI*ANTLTSQAITDVIN
Trigger: GTTAATCACATCTGTAATAGCCTGACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp CCCTCATTTAATGAAGCGGGACATCCCTCCCAGCTGTTATACACGTaGATTTGTTCTTCAGAACTCTGCCAATCCAGAGGTTCCCAAATA +
Preference number: 6 (lower is better)
Translates to: PSFNEAGHPSQLLYT*ICSSELCQSRGSQI
Trigger: TATTTGGGAACCTCTGGATTGGCAGAGTTCTGAAGAACAAATCAACGTGTATAACAGCTGGGAGGGATGTCCCGCTTCATTAAATGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307340.8
ENST00000463147.1
ENST00000481786.1
ENST00000674083.1
CDS TCA 72 bp ATCAGAGCTGGTAGAGATGACTCTCTCCTTTCCAGCTaGTATATAGGAGAGGGTCCATTCAGTTCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: IRAGRDDSLLSS*YIGEGPFSSSG
Trigger: ACCTGAAGAACTGAATGGACCCTCTCCTATATATCAGCTGGAAAGGAGAGAGTCATCTCTACCAGCTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp CTGGCCTTAATGCCAGTGAAGTCTGTATTGACTGGGTaGGTGGAGCTGGGAAATTTACAATACCCATTTCCT +
Preference number: 6 (lower is better)
Translates to: LALMPVKSVLTG*VELGNLQYPFP
Trigger: AGGAAATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAGTCAATACAGACTTCACTGGCATTAAGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CTAAGAGCAGAAGTCTTGTCAATAAACCTCATGGAATaGCTCCTCGGGAGAGTCACCAGGGTAGTAACTTCT +
Preference number: 6 (lower is better)
Translates to: LRAEVLSINLME*LLGRVTRVVTS
Trigger: AGAAGTTACTACCCTGGTGACTCTCCCGAGGAGTCATTCCATGAGGTTTATTGACAAGACTTCTGCTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp TTTGCCGTAGGTAGAAGTTTCCCTCCAAACATTTATTaGACTGTCTCCCTTCAACATTGGGCTTGCAGATGC +
Preference number: 6 (lower is better)
Translates to: FAVGRSFPPNIY*TVSLQHWACRC
Trigger: GCATCTGCAAGCCCAATGTTGAAGGGAGACAGTGCAATAAATGTTTGGAGGGAAACTTCTACCTACGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp CAACTGTATCACAGTCACAGGGTTTGCAAACATCTATaGCCGAAGGATCTGCACCAACTTGTCGGAAAAAGT +
Preference number: 6 (lower is better)
Translates to: QLYHSHRVCKHL*PKDLHQLVGKS
Trigger: ACTTTTTCCGACAAGTTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAACCCTGTGACTGTGATACAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp GTTTTGCTGCAACCCAATAGATTGTTGACATCCAAGTaGCTTGCACTGGGAACACAAGCATCACACTTTGAG +
Preference number: 6 (lower is better)
Translates to: VLLQPNRLLTSK*LALGTQASHFE
Trigger: CTCAAAGTGTGATGCTTGTGTTCCCAGTGCAAGCCACTTGGATGTCAACAATCTATTGGGTTGCAGCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp ATAAAAACCTGGTTGACACTGATTACACCTTCTTCCTaGACGATTAGGCACACACAGGCACTGGCCACTGAT +
Preference number: 6 (lower is better)
Translates to: IKTWLTLITPSS*TIRHTQALATD
Trigger: ATCAGTGGCCAGTGCCTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAATCAGTGTCAACCAGGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp CCAGCCATATTCACAGCTAAGACTCTGAACTCATACTaGGTGTATGGCTCCAAGCCAGTGATGGTTGTCATT +
Preference number: 6 (lower is better)
Translates to: PAIFTAKTLNSY*VYGSKPVMVVI
Trigger: AATGACAACCATCACTGGCTTGGAGCCATACACCAAGTATGAGTTCAGAGTCTTAGCTGTGAATATGGCTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp CTTGTAACATTATCTGCTGGCTTCTCCCAGGAGATATaGAGAGAGTACGAAGAGAGGGGAAAGACTGAAGGA +
Preference number: 6 (lower is better)
Translates to: LVTLSAGFSQEI*REYEERGKTEG
Trigger: TCCTTCAGTCTTTCCCCTCTCTTCGTACTCTCTCAATATCTCCTGGGAGAAGCCAGCAGATAATGTTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp CATGCAACCACCGAAACCTTGTTCCAAACACAAATGTaGATAAGAGTTCAGCAGTTCCTGTGGGATTCCTCC +
Preference number: 6 (lower is better)
Translates to: HATTETLFQTQM*IRVQQFLWDSS
Trigger: GGAGGAATCCCACAGGAACTGCTGAACTCTTATCAACATTTGTGTTTGGAACAAGGTTTCGGTGGTTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp ACTCTTCTCTCAATTGTGAAATTCTCCACCAAGCCATaGGGGTGGGTAGGGGGTTGCCAAGATATAATCACA +
Preference number: 6 (lower is better)
Translates to: TLLSIVKFSTKP*GWVGGCQDIIT
Trigger: TGTGATTATATCTTGGCAACCCCCTACCCACCCCAATGGCTTGGTGGAGAATTTCACAATTGAGAGAAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp ACATCTTCCAGTCTGAGGATCAAATCCAAAGTAATGGTCTTTGCATaGGTCACAACGTTGCCCAGCAATGGAAGCATCTTGGCAAACACA +
Preference number: 6 (lower is better)
Translates to: TSSSLRIKSKVMVFA*VTTLPSNGSILANT
Trigger: TGTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCATTACTTTGGATTTGATCCTCAGACTGGAAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp TGTGGGTGTTGGTATATCACTTGGAGTGTCTTCCACAGTGGTAATTaGGGTTCCATTGCTTTTCACGCAGGCATATATTGTGCAGACTTC +
Preference number: 6 (lower is better)
Translates to: CGCWYITWSVFHSGN*GSIAFHAGIYCADF
Trigger: GAAGTCTGCACAATATATGCCTGCGTGAAAAGCAATGGAACCCAAATTACCACTGTGGAAGACACTCCAAGTGATATACCAACACCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp TCCCTGTATGAATGGTTTCTTCGGCAGATGAACACATTTCTTCAATaGATGCCTTCCCTGTGGAATTGTGAGACCCTCTTATCACAGTGC +
Preference number: 6 (lower is better)
Translates to: SLYEWFLRQMNTFLQ*MPSLWNCETLLSQC
Trigger: GCACTGTGATAAGAGGGTCTCACAATTCCACAGGGAAGGCATCAATTGAAGAAATGTGTTCATCTGCCGAAGAAACCATTCATACAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp AAGCCCAATAACGTTTGCTTTGCACTTGCACTGGCCTaGATTTTGGTGACAGGTAATATCTCCATCCACTGT +
Preference number: 6 (lower is better)
Translates to: KPNNVCFALALA*ILVTGNISIHC
Trigger: ACAGTGGATGGAGATATTACCTGTCACCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAACGTTATTGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp CACATTTCTTCAATTGATGCCTTCCCTGTGGAATTGTaGGACCCTCTTATCACAGTGCAAATGTGGCTGGTA +
Preference number: 6 (lower is better)
Translates to: HISSIDAFPVEL*DPLITVQMWLV
Trigger: TACCAGCCACATTTGCACTGTGATAAGAGGGTCTCACAATTCCACAGGGAAGGCATCAATTGAAGAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GGCACAGCCAGCAACCGTGCAAGCTTTCAGCTGATATaGATATTCCTGAAATGGTTGAATTCCCTCTTTATC +
Preference number: 6 (lower is better)
Translates to: GTASNRASFQLI*IFLKWLNSLFI
Trigger: GATAAAGAGGGAATTCAACCATTTCAGGAATATTCATATCAGCTGAAAGCTTGCACGGTTGCTGGCTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CCTCACCACATTCCAAGAGCTACAGGTATGCCCAGCTaGATTCCAAGTGTAGATTTTATATTCACACTGCGT +
Preference number: 6 (lower is better)
Translates to: PHHIPRATGMPS*IPSVDFIFTLR
Trigger: ACGCAGTGTGAATATAAAATCTACACTTGGAATTCAGCTGGGCATACCTGTAGCTCTTGGAATGTGGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp ACTCTTGTAGATTGTAGAATCCATTCTGGCACTGATTaGACTGCCTGCCAGACACGTGTCTCTTACAATTAC +
Preference number: 6 (lower is better)
Translates to: TLVDCRIHSGTD*TACQTRVSYNY
Trigger: GTAATTGTAAGAGACACGTGTCTGGCAGGCAGTGCAATCAGTGCCAGAATGGATTCTACAATCTACAAGAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp TTCCAGTCTGAGGATCAAATCCAAAGTAATGGTCTTTaGATTGGTCACAACGTTGCCCAGCAATGGAAGCAT +
Preference number: 6 (lower is better)
Translates to: FQSEDQIQSNGL*IGHNVAQQWKH
Trigger: ATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCATTACTTTGGATTTGATCCTCAGACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp GGTCCATTCAGTTCTTCAGGTGGAAACCACCTAAGATaGATTGTTGTGCTGTTGATTCCTTTAACCAGAGGT +
Preference number: 6 (lower is better)
Translates to: GPFSSSGGNHLR*IVVLLIPLTRG
Trigger: ACCTCTGGTTAAAGGAATCAACAGCACAACAATCCATCTTAGGTGGTTTCCACCTGAAGAACTGAATGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp AAAGCTGGCCTTAATGCCAGTGAAGTCTGTATTGACTaGGTGAGTGGAGCTGGGAAATTTACAATACCCATT +
Preference number: 6 (lower is better)
Translates to: KAGLNASEVCID*VSGAGKFTIPI
Trigger: AATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAGTCAATACAGACTTCACTGGCATTAAGGCCAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GTACAGCCCACATGTGTGCATGCACTTAGTAGAAACTaGTGGGGTGTAAATACTGCTAAATCTGTGACTATG +
Preference number: 6 (lower is better)
Translates to: VQPTCVHALSRN*WGVNTAKSVTM
Trigger: CATAGTCACAGATTTAGCAGTATTTACACCCCACCAGTTTCTACTAAGTGCATGCACACATGTGGGCTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp TTTTTGGGGATTCATAGAAACATAGGATATCACAGGTaGAGAGAGACCTTCTGGAGGTGCTTGCAATGTCCT +
Preference number: 6 (lower is better)
Translates to: FLGIHRNIGYHR*RETFWRCLQCP
Trigger: AGGACATTGCAAGCACCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTATGTTTCTATGAATCCCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp AAACATTTATTGCACTGTCTCCCTTCAACATTGGGCTaGCAGATGCACTGCCCTGTCTTAGCATTACAGACA +
Preference number: 6 (lower is better)
Translates to: KHLLHCLPSTLG*QMHCPVLALQT
Trigger: TGTCTGTAATGCTAAGACAGGGCAGTGCATCTGCAAGCCCAATGTTGAAGGGAGACAGTGCAATAAATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GTCCTGTTGATTTGTTACACAGCAGAGAGCCATTTATaGTCCCAGTCTTATCACAGTTGCAAGGCAGACAGA +
Preference number: 6 (lower is better)
Translates to: VLLICYTAESHL*SQSYHSCKADR
Trigger: TCTGTCTGCCTTGCAACTGTGATAAGACTGGGACAATAAATGGCTCTCTGCTGTGTAACAAATCAACAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp AAATCCAAAGTAATGGTCTTTGCATTGGTCACAACGTaGCCCAGCAATGGAAGCATCTTGGCAAACACACTG +
Preference number: 6 (lower is better)
Translates to: KSKVMVFALVTT*PSNGSILANTL
Trigger: CAGTGTGTTTGCCAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCATTACTTTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp AGTCTGAGGATCAAATCCAAAGTAATGGTCTTTGCATaGGTCACAACGTTGCCCAGCAATGGAAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: SLRIKSKVMVFA*VTTLPSNGSIL
Trigger: CAAGATGCTTCCATTGCTGGGCAACGTTGTGACCAATGCAAAGACCATTACTTTGGATTTGATCCTCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GGAGAATTAAGATCCATTGGGGCTGCTTCAGGTGTTTaGACAAACATCCTACTGCTAACTCCACAACTTCCA +
Preference number: 6 (lower is better)
Translates to: GELRSIGAASGV*TNILLLTPQLP
Trigger: TGGAAGTTGTGGAGTTAGCAGTAGGATGTTTGTCAAAACACCTGAAGCAGCCCCAATGGATCTTAATTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp CGAAGACCTGTTACCCCTAATTTGCAAGGACATTGTCCTGTTGATTaGTTACACAGCAGAGAGCCATTTATTGTCCCAGTCTTATCACAG +
Preference number: 6 (lower is better)
Translates to: RRPVTPNLQGHCPVD*LHSREPFIVPVLSQ
Trigger: CTGTGATAAGACTGGGACAATAAATGGCTCTCTGCTGTGTAACAAATCAACAGGACAATGTCCTTGCAAATTAGGGGTAACAGGTCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp TTGGGCTTTTCTGGCAGACTCCAATATAATTCCACTGTTGTAGAATaGATGATAATGTGTCGAGGTGTCACCCAAACTCCTTCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: LGFSGRLQYNSTVVE*MIMCRGVTQTPSGA
Trigger: AGCTCCTGAAGGAGTTTGGGTGACACCTCGACACATTATCATCAATTCTACAACAGTGGAATTATATTGGAGTCTGCCAGAAAAGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CATTTTCATTGGCCGATTCTACAAATGAATGAGGACTaGGCCAACCACTGCTCTGAAAAACTCGACTTTCCT +
Preference number: 6 (lower is better)
Translates to: HFHWPILQMNED*ANHCSEKLDFP
Trigger: AGGAAAGTCGAGTTTTTCAGAGCAGTGGTTGGCTCAGTCCTCATTCATTTGTAGAATCGGCCAATGAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp TTGTCCTGCTCCCGAAGCACTGGTCACACAACCAACTaGATTGCAGAGAGTAATAGTAAACTCATATATCCT +
Preference number: 6 (lower is better)
Translates to: LSCSRSTGHTTN*IAESNSKLIYP
Trigger: AGGATATATGAGTTTACTATTACTCTCTGCAATTCAGTTGGTTGTGTGACCAGTGCTTCGGGAGCAGGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp GAGTGGAGCTGGGAAATTTACAATACCCATTTCCTATaGAACGGATTCCTTTCATCATCGTGGTCATCAGAG +
Preference number: 6 (lower is better)
Translates to: EWSWEIYNTHFL*NGFLSSSWSSE
Trigger: CTCTGATGACCACGATGATGAAAGGAATCCGTTTCATAGGAAATGGGTATTGTAAATTTCCCAGCTCCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp CAACTGAAGTGCAAAATACTCTTCCTGATTGCCAGGTaGTGCTGCAAAGACAATCAAACCTTCAGGCACTTT +
Preference number: 6 (lower is better)
Translates to: QLKCKILFLIAR*CCKDNQTFRHF
Trigger: AAAGTGCCTGAAGGTTTGATTGTCTTTGCAGCATCACCTGGCAATCAGGAAGAGTATTTTGCACTTCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GATACCATGTTTTCCATAGGAGATCATATCCAAGAATaGTGCCATTTGGCTTCCGTGGAGACACCCAATCAA +
Preference number: 6 (lower is better)
Translates to: DTMFSIGDHIQE*CHLASVETPNQ
Trigger: TTGATTGGGTGTCTCCACGGAAGCCAAATGGCATCATTCTTGGATATGATCTCCTATGGAAAACATGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp TTTTTCAGGTGGCATCCACTTAATCTCTATGCAAGCTaGCCCCAGTGCCTTAAGAACAGGAGAATTAAGATC +
Preference number: 6 (lower is better)
Translates to: FFRWHPLNLYAS*PQCLKNRRIKI
Trigger: GATCTTAATTCTCCTGTTCTTAAGGCACTGGGGTCAGCTTGCATAGAGATTAAGTGGATGCCACCTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp ATATTTAGTAATCTTTCCATTTTGCACTGTGGGCGGTaGCCAACATACATTCATTTGAGTGGCACTGACGGC +
Preference number: 6 (lower is better)
Translates to: IFSNLSILHCGR*PTYIHLSGTDG
Trigger: GCCGTCAGTGCCACTCAAATGAATGTATGTTGGTCACCGCCCACAGTGCAAAATGGAAAGATTACTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp CAAACACACTTACCAGTGAAGTCTGTATTGACTGGGTaGGTGGAGCTGGGAAATTTACAATACCCATTTCCT +
Preference number: 6 (lower is better)
Translates to: QTHLPVKSVLTG*VELGNLQYPFP
Trigger: AGGAAATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAGTCAATACAGACTTCACTGGTAAGTGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS TCA 72 bp CTAACCCCTCAAAGTGCATGGTGTAACTTTTTAGGGTaGCATTGCTTGACACATCAGATATATCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: LTPQSAWCNFLG*HCLTHQIYQPQ
Trigger: CTGTGGCTGATATATCTGATGTGTCAAGCAATGTCACCCTAAAAAGTTACACCATGCACTTTGAGGGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674083.1
CDS GCA 72 bp CACACTGATTACAGCGAAGACCTGTTACCCCTAATTTaGAAGGACATTGTCCTGTTGATTTGTTACACAGCA +
Preference number: 6 (lower is better)
Translates to: HTDYSEDLLPLI*KDIVLLICYTA
Trigger: TGCTGTGTAACAAATCAACAGGACAATGTCCTTGCAAATTAGGGGTAACAGGTCTTCGCTGTAATCAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp CCTTCTTCAACTGAAGTGCAAAATACTCTTCCTGATTaGCAGGTGATGCTGCAAAGACAATCAAACCTTCAG +
Preference number: 6 (lower is better)
Translates to: PSSTEVQNTLPD*QVMLQRQSNLQ
Trigger: CTGAAGGTTTGATTGTCTTTGCAGCATCACCTGGCAATCAGGAAGAGTATTTTGCACTTCAGTTGAAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CTGATATATAGGAGAGGGTCCATTCAGTTCTTCAGGTaGAAACCACCTAAGATGGATTGTTGTGCTGTTGAT +
Preference number: 6 (lower is better)
Translates to: LIYRRGSIQFFR*KPPKMDCCAVD
Trigger: ATCAACAGCACAACAATCCATCTTAGGTGGTTTCCACCTGAAGAACTGAATGGACCCTCTCCTATATATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp TCTGCGAATCACTTCATAGCGAATTATTTTTCCATTTaGGTTAACAGGCTCAGACCAGCTCAGCTCAACACT +
Preference number: 6 (lower is better)
Translates to: SANHFIANYFSI*VNRLRPAQLNT
Trigger: AGTGTTGAGCTGAGCTGGTCTGAGCCTGTTAACCCAAATGGAAAAATAATTCGCTATGAAGTGATTCGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp AGCAGAGAGCCATTTATTGTCCCAGTCTTATCACAGTaGCAAGGCAGACAGAGGAAAGAATTATTTTGCCGT +
Preference number: 6 (lower is better)
Translates to: SREPFIVPVLSQ*QGRQRKELFCR
Trigger: ACGGCAAAATAATTCTTTCCTCTGTCTGCCTTGCAACTGTGATAAGACTGGGACAATAAATGGCTCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GTTACCCCTAATTTGCAAGGACATTGTCCTGTTGATTaGTTACACAGCAGAGAGCCATTTATTGTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: VTPNLQGHCPVD*LHSREPFIVPV
Trigger: GACTGGGACAATAAATGGCTCTCTGCTGTGTAACAAATCAACAGGACAATGTCCTTGCAAATTAGGGGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GACCTGTTACCCCTAATTTGCAAGGACATTGTCCTGTaGATTTGTTACACAGCAGAGAGCCATTTATTGTCC +
Preference number: 6 (lower is better)
Translates to: DLLPLICKDIVL*ICYTAESHLLS
Trigger: GGACAATAAATGGCTCTCTGCTGTGTAACAAATCAACAGGACAATGTCCTTGCAAATTAGGGGTAACAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 72 bp GGCAGAGGAACCTGTATATATCCCATCCAGAGTGATTaGGCCAAAAGCCTGATGCCTAATAGCAATTATTTC +
Preference number: 6 (lower is better)
Translates to: GRGTCIYPIQSD*AKSLMPNSNYF
Trigger: GAAATAATTGCTATTAGGCATCAGGCTTTTGGCCAAATCACTCTGGATGGGATATATACAGGTTCCTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000481786.1
ENST00000674083.1
CDS CAA 90 bp GTTGCATTGACAAGGTTTACAATTGAAAGCGTAAACTTGATCACCTaGGCGGAAAGGCTTGTCATTATAAAGAGGCAAGCAGCGATCACA +
Preference number: 6 (lower is better)
Translates to: VALTRFTIESVNLIT*AERLVIIKRQAAIT
Trigger: TGTGATCGCTGCTTGCCTCTTTATAATGACAAGCCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTCAATGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp GGAATGGCTGTTGCATTGACAAGGTTTACAATTGAAAGCGTAAACTaGATCACCTTGGCGGAAAGGCTTGTCATTATAAAGAGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: GMAVALTRFTIESVN*ITLAERLVIIKRQA
Trigger: TGCTTGCCTCTTTATAATGACAAGCCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTCAATGCAACAGCCATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp GTCTACAGAGATGTTGTAATGGCAGCTTTTGGAATGGCTGTTGCATaGACAAGGTTTACAATTGAAAGCGTAAACTTGATCACCTTGGCG +
Preference number: 6 (lower is better)
Translates to: VYRDVVMAAFGMAVA*TRFTIESVNLITLA
Trigger: CGCCAAGGTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTCAATGCAACAGCCATTCCAAAAGCTGCCATTACAACATCTCTGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CAA 90 bp TACAGCGAAGACCTGTTACCCCTAATTTGCAAGGACATTGTCCTGTaGATTTGTTACACAGCAGAGAGCCATTTATTGTCCCAGTCTTAT +
Preference number: 6 (lower is better)
Translates to: YSEDLLPLICKDIVL*ICYTAESHLLSQSY
Trigger: ATAAGACTGGGACAATAAATGGCTCTCTGCTGTGTAACAAATCAACAGGACAATGTCCTTGCAAATTAGGGGTAACAGGTCTTCGCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp ACTTGCCAGCAATACTTTGAAGCAGGGTACTTTAAGTaGTGTTGCGATACTCCATTTTCTGGAAACTGCAGA +
Preference number: 6 (lower is better)
Translates to: TCQQYFEAGYFK*CCDTPFSGNCR
Trigger: TCTGCAGTTTCCAGAAAATGGAGTATCGCAACATCACTTAAAGTACCCTGCTTCAAAGTATTGCTGGCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp TTTTGGAATGGCTGTTGCATTGACAAGGTTTACAATTaGAAGCGTAAACTTGATCACCTTGGCGGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: FWNGCCIDKVYN*KRKLDHLGGKA
Trigger: AGCCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTCAATGCAACAGCCATTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp TGCAACAGCTGTGAAAACGCCATGGGAATAGACTGTTaGGGTGATTGTTCAGAAAGCATATTGATGTCATAC +
Preference number: 6 (lower is better)
Translates to: CNSCENAMGIDC*GDCSESILMSY
Trigger: GTATGACATCAATATGCTTTCTGAACAATCACCTCAACAGTCTATTCCCATGGCGTTTTCACAGCTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp ATAGATAGAATACTCAGTGACAACACCATTTGGGTTTaGAGGAGATGTCCAGATGACACGTACAGCTGTACT +
Preference number: 6 (lower is better)
Translates to: IDRILSDNTIWV*RRCPDDTYSCT
Trigger: AGTACAGCTGTACGTGTCATCTGGACATCTCCTTCAAACCCAAATGGTGTTGTCACTGAGTATTCTATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp AAAATAAAACTTGCAGAATTGCTATGGGCGTTAGGATaGAGATCATTCTTGTCTGGTGTGATGCAGCTACTG +
Preference number: 6 (lower is better)
Translates to: KIKLAELLWALG*RSFLSGVMQLL
Trigger: CAGTAGCTGCATCACACCAGACAAGAATGATCTGCATCCTAACGCCCATAGCAATTCTGCAAGTTTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS GCA 72 bp CGATTTAAATCTTCTGGGGGATTTGATGCAAGTGGCTaGTGGATTTTACGTCTCAGAAGCTCATATCTCAAA +
Preference number: 6 (lower is better)
Translates to: RFKSSGGFDASG*WILRLRSSYLK
Trigger: TTTGAGATATGAGCTTCTGAGACGTAAAATCCAGCAGCCACTTGCATCAAATCCCCCAGAAGATTTAAATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CAGATGAACACATTTCTTCAATTGATGCCTTCCCTGTaGAATTGTGAGACCCTCTTATCACAGTGCAAATGT +
Preference number: 6 (lower is better)
Translates to: QMNTFLQLMPSL*NCETLLSQCKC
Trigger: ACATTTGCACTGTGATAAGAGGGTCTCACAATTCCACAGGGAAGGCATCAATTGAAGAAATGTGTTCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp ATGTCAAACACACTTACCAGTGAAGTCTGTATTGACTaGGTGAGTGGAGCTGGGAAATTTACAATACCCATT +
Preference number: 6 (lower is better)
Translates to: MSNTLTSEVCID*VSGAGKFTIPI
Trigger: AATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAGTCAATACAGACTTCACTGGTAAGTGTGTTTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366942.3
CDS CAA 72 bp TGGTATATCACTTGGAGTGTCTTCCACAGTGGTAATTaGGGTTCCATTGCTTTTCACGCAGGCATATATTGT +
Preference number: 6 (lower is better)
Translates to: WYITWSVFHSGN*GSIAFHAGIYC
Trigger: ACAATATATGCCTGCGTGAAAAGCAATGGAACCCAAATTACCACTGTGGAAGACACTCCAAGTGATATACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp TCTGGCAGACTCCAATATAATTCCACTGTTGTAGAATaGATGATAATGTGTCGAGGTGTCACCCAAACTCCT +
Preference number: 6 (lower is better)
Translates to: SGRLQYNSTVVE*MIMCRGVTQTP
Trigger: AGGAGTTTGGGTGACACCTCGACACATTATCATCAATTCTACAACAGTGGAATTATATTGGAGTCTGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 90 bp ATTCAGGATGGCAGAGGAACCTGTATATATCCCATCCAGAGTGATTaGGCCAAAAGCCTGATGCCTAATAGCAATTATTTCATGCCATTT +
Preference number: 6 (lower is better)
Translates to: IQDGRGTCIYPIQSD*AKSLMPNSNYFMPF
Trigger: AAATGGCATGAAATAATTGCTATTAGGCATCAGGCTTTTGGCCAAATCACTCTGGATGGGATATATACAGGTTCCTCTGCCATCCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000481786.1
ENST00000674083.1
CDS CAA 90 bp TTCCTGAATAAATATTGTGCCACCGATTTAAATCTTCTGGGGGATTaGATGCAAGTGGCTGCTGGATTTTACGTCTCAGAAGCTCATATC +
Preference number: 6 (lower is better)
Translates to: FLNKYCATDLNLLGD*MQVAAGFYVSEAHI
Trigger: GATATGAGCTTCTGAGACGTAAAATCCAGCAGCCACTTGCATCAAATCCCCCAGAAGATTTAAATCGGTGGCACAATATTTATTCAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp GTAATACCAACGACGTTCTTAGCAATGGCGAAGACATaGGTAGCTGCTGGTATCATTTCTTTATTGCATTTC +
Preference number: 6 (lower is better)
Translates to: VIPTTFLAMAKT*VAAGIISLLHF
Trigger: GAAATGCAATAAAGAAATGATACCAGCAGCTACTCATGTCTTCGCCATTGCTAAGAACGTCGTTGGTATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp CATTTGAAACCCATGAAGTACCAACATCATTATCATTaGCAAAAGAGAGAGGATGGGCTTCAGGATTCAACC +
Preference number: 6 (lower is better)
Translates to: HLKPMKYQHHYH*QKREDGLQDST
Trigger: GGTTGAATCCTGAAGCCCATCCTCTCTCTTTTGTCAATGATAATGATGTTGGTACTTCATGGGTTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp ATTCCATTTAGTTCCGCTGGTGGAGACCATTCTACATaGAGTTCTGTAGAACTGATTTTCTGCATCTTAGGT +
Preference number: 6 (lower is better)
Translates to: IPFSSAGGDHST*SSVELIFCILG
Trigger: ACCTAAGATGCAGAAAATCAGTTCTACAGAACTTCATGTAGAATGGTCTCCACCAGCGGAACTAAATGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp GTAAACTCCAAGGAGCAAATCCGTAAGCACGATAGCTaGGTTCTGAGGAATTGTGGATTAATATACCATCTA +
Preference number: 6 (lower is better)
Translates to: VNSKEQIRKHDS*VLRNCGLIYHL
Trigger: TAGATGGTATATTAATCCACAATTCCTCAGAACTCAGCTATCGTGCTTACGGATTTGCTCCTTGGAGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp AGATCCAATACTCTGTGTTTGGCTTTAGGTGGCCAATaGCATGAGAGTTTACATCTGGCAAGATTTTTAGAG +
Preference number: 6 (lower is better)
Translates to: RSNTLCLALGGQ*HESLHLARFLE
Trigger: CTCTAAAAATCTTGCCAGATGTAAACTCTCATGTCATTGGCCACCTAAAGCCAAACACAGAGTATTGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GGTATTATAGAAGTTATTGTATCCAGGACGATAATTTaGTCCAGGTGTCAGGATGCTAAATGTGACATTGCC +
Preference number: 6 (lower is better)
Translates to: GIIEVIVSRTII*SRCQDAKCDIA
Trigger: GGCAATGTCACATTTAGCATCCTGACACCTGGACCAAATTATCGTCCTGGATACAATAACTTCTATAATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp AGTGCTCATCAGTACCCGATATTCATATTTTGTCCATaGGCTAAGAGCAGAAGTCTTGTCAATAAACCTCAT +
Preference number: 6 (lower is better)
Translates to: SAHQYPIFIFCP*AKSRSLVNKPH
Trigger: ATGAGGTTTATTGACAAGACTTCTGCTCTTAGCCCATGGACAAAATATGAATATCGGGTACTGATGAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CTGTGTAAGAGTACGTGTTTACACTCCCTGTATGAATaGTTTCTTCGGCAGATGAACACATTTCTTCAATTG +
Preference number: 6 (lower is better)
Translates to: LCKSTCLHSLYE*FLRQMNTFLQL
Trigger: CAATTGAAGAAATGTGTTCATCTGCCGAAGAAACCATTCATACAGGGAGTGTAAACACGTACTCTTACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp ACAAGGTTTACAATTGAAAGCGTAAACTTGATCACCTaGGCGGAAAGGCTTGTCATTATAAAGAGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: TRFTIESVNLIT*AERLVIIKRQA
Trigger: TGCTTGCCTCTTTATAATGACAAGCCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAATTGTAAACCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp ATTGAACCACTTAGAGTTCTTGCATTGAAAGGTGTATaGTCCTTCTCCACGCCATTGATAAAGAAGCTGATT +
Preference number: 6 (lower is better)
Translates to: IEPLRVLALKGV*SFSTPLIKKLI
Trigger: AATCAGCTTCTTTATCAATGGCGTGGAGAAGGATCATACACCTTTCAATGCAAGAACTCTAAGTGGTTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp TTCAGAACTCTGCCAATCCAGAGGTTCCCAAATAGCTaGCGGATTGTAATTCTTCATAAAATGTACATCCTT +
Preference number: 6 (lower is better)
Translates to: FRTLPIQRFPNS*RIVILHKMYIL
Trigger: AAGGATGTACATTTTATGAAGAATTACAATCCGTCAGCTATTTGGGAACCTCTGGATTGGCAGAGTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307340.8
ENST00000463147.1
ENST00000481786.1
ENST00000674083.1
CDS GCA 72 bp TATCTCAAATTAGGTCCATTTGGCTTGGATGGTGGTTaGCAAGAAATCACAACATATGATTCACTTAGTGGA +
Preference number: 6 (lower is better)
Translates to: YLKLGPFGLDGG*QEITTYDSLSG
Trigger: TCCACTAAGTGAATCATATGTTGTGATTTCTTGGCAACCACCATCCAAGCCAAATGGACCTAATTTGAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp CCTTATTTGCGTGGCTTTTACGAACTCTTGAAGAGATaGGGTATTATAGAAGTTATTGTATCCAGGACGATA +
Preference number: 6 (lower is better)
Translates to: PYLRGFYELLKR*GIIEVIVSRTI
Trigger: TATCGTCCTGGATACAATAACTTCTATAATACCCCATCTCTTCAAGAGTTCGTAAAAGCCACGCAAATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp TTTAAATCTTCTGGGGGATTTGATGCAAGTGGCTGCTaGATTTTACGTCTCAGAAGCTCATATCTCAAATTA +
Preference number: 6 (lower is better)
Translates to: FKSSGGFDASGC*ILRLRSSYLKL
Trigger: TAATTTGAGATATGAGCTTCTGAGACGTAAAATCCAGCAGCCACTTGCATCAAATCCCCCAGAAGATTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp GCTCTTTGGAATAAGTTCAGTCTCACAGCATTTTACTaGCACCGGGTCATTCTTTTTAATATGTGCTTTAGA +
Preference number: 6 (lower is better)
Translates to: ALWNKFSLTAFY*HRVILFNMCFR
Trigger: TCTAAAGCACATATTAAAAAGAATGACCCGGTGCCAGTAAAATGCTGTGAGACTGAACTTATTCCAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CAA 72 bp GTTGCATTGACAAGGTTTACAATTGAAAGCGTAAACTaGATCACCTTGGCGGAAAGGCTTGTCATTATAAAG +
Preference number: 6 (lower is better)
Translates to: VALTRFTIESVN*ITLAERLVIIK
Trigger: CTTTATAATGACAAGCCTTTCCGCCAAGGTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTCAATGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS TCA 72 bp CATTTTGACATGCTTGTATCCTTATCTCATACTGTGTaGATGGAGTCAAATTTTCCAGAAGGGTGGATTGAT +
Preference number: 6 (lower is better)
Translates to: HFDMLVSLSHTV*MESNFPEGWID
Trigger: ATCAATCCACCCTTCTGGAAAATTTGACTCCATTCACACAGTATGAGATAAGGATACAAGCATGTCAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS GCA 72 bp CTGTTTGTAAGTGCCACTTGGTATAATCGAAAATCTTaGATTCTTCCGACAAACTGCTCTAAACCATTTAAA +
Preference number: 6 (lower is better)
Translates to: LFVSATWYNRKS*ILPTNCSKPFK
Trigger: TTTAAATGGTTTAGAGCAGTTTGTCGGAAGAATGCAAGATTTTCGATTATACCAAGTGGCACTTACAAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307340.8
ENST00000366942.3
ENST00000674083.1
CDS CCA 72 bp TTCAAAGGATTATATCCAACTCCATTACAGCATTTCTaGCTCTTTGGAATAAGTTCAGTCTCACAGCATTTT +
Preference number: 6 (lower is better)
Translates to: FKGLYPTPLQHF*LFGISSVSQHF
Trigger: AAAATGCTGTGAGACTGAACTTATTCCAAAGAGCCAGAAATGCTGTAATGGAGTTGGATATAATCCTTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS CCA 72 bp AAATGTACATCCTTGAGACAGCCCACAAAACCTTTTTaGATTATCTCTGCAGGAGTTTATAGATATCAAGAA +
Preference number: 6 (lower is better)
Translates to: KCTSLRQPTKPF*IISAGVYRYQE
Trigger: TTCTTGATATCTATAAACTCCTGCAGAGATAATCCAAAAAGGTTTTGTGGGCTGTCTCAAGGATGTACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463147.1
CDS CAA 72 bp CCAAGTGTAGATTTTATATTCACACTGCGTCCATGGTaGCAAACCTGTGTCATTATACATAAATGTATTCCT +
Preference number: 6 (lower is better)
Translates to: PSVDFIFTLRPW*QTCVIIHKCIP
Trigger: AGGAATACATTTATGTATAATGACACAGGTTTGCAACCATGGACGCAGTGTGAATATAAAATCTACACTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1
CDS TCA 72 bp TGTTATAGGATCAGTTATCAAGCTGCCTTGGCTATTTaGAATATTCACTTGTACAGTATAGTTGGTAAAAGG +
Preference number: 6 (lower is better)
Translates to: CYRISYQAALAI*NIHLYSIVGKR
Trigger: CCTTTTACCAACTATACTGTACAAGTGAATATTTCAAATAGCCAAGGCAGCTTGATAACTGATCCTATAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307340.8
ENST00000674083.1