RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105698

Ensembl transcript IDs: ENST00000222305.8, ENST00000343550.9, ENST00000379134.7, ENST00000593708.1, ENST00000594064.5, ENST00000594264.1, ENST00000595068.5, ENST00000596380.5, ENST00000597671.5, ENST00000598058.1, ENST00000599471.5, ENST00000599625.1, ENST00000600341.5, ENST00000600898.1, ENST00000602164.5, ENST00000607959.5

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp AATCGTGCCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATCACAGCCAGCGGGAAGGGCGCTGCA +
Preference number: 2 (lower is better)
Translates to: NRASPLTASAAGLPP*LKGFWITASGKGAA
Trigger: TGCAGCGCCCTTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602164.5
3UTR-3UTR CCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTAGTGGAGGAGGGCGGTaGGCACTGTATCCACAGAAA +
Preference number: 2 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRSGGGR*ALYPQK
Trigger: TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACT...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
3UTR-3UTR CCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTAGTGGAGGAGGGCGGTaGGCACTGTATCCACAGAAA +
Preference number: 2 (lower is better)
Translates to: VRAGRRATDRRMGREDTVSGGGR*ALYPQK
Trigger: TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACT...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
3UTR-3UTR GCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTGGGACGTGGCCTCCCTaGATAGGTCCAGGCCCCGGG +
Preference number: 2 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFGTWPP*IGPGPG
Trigger: CCCGGGGCCTGGACCTATGCAGGGAGGCCACGTCCC...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
3UTR-3UTR GCA 90 bp CGCTCCCGTCTTGCTGTTGTCTGCGTTACAGTCTGGAATGATTTTCGAAAGCTGACCTGTCCTCGTCAATaGCCCAGAAGCTTCCGCCAA +
Preference number: 2 (lower is better)
Translates to: RSRLAVVCVTVWNDFRKLTCPRQ*PRSFRQ
Trigger: TTGGCGGAAGCTTCTGGGGCATTGACGAGGACAGGT...CAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
3UTR-3UTR CCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTAGTGGAGGAGGGCGGTaGGCACTGTATCCACAGAAA +
Preference number: 2 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFSGGGR*ALYPQK
Trigger: TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACT...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
3UTR-3UTR CCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTCGACAGACAGACGGATaGGCAGGGAGGATACCGTTT +
Preference number: 2 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFRQTDG*AGRIPF
Trigger: AAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCG...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
3UTR GCA 72 bp CACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTaGTGCTGCAGCTGGGCTCGAAGCAGGGCGTTCTCA +
Preference number: 3 (lower is better)
Translates to: HCRVPSPTISRL*CCSWARSRAFS
Trigger: TGAGAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
3UTR GCA 72 bp TGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTaGTGCAGCTGGGCTCGAAGCAGGGCGTTCTCATTC +
Preference number: 3 (lower is better)
Translates to: CRVPSPTISRLC*CSWARSRAFSF
Trigger: GAATGAGAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
3UTR CCA 72 bp ACCCCCAAAGGGGAGCAGGGACCCAGAAACAAGAGGTaGGGTGGGACGTGGCCTCCCTGCATAGGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: TPKGEQGPRNKR*GGTWPPCIGPG
Trigger: GCCTGGACCTATGCAGGGAGGCCACGTCCCACCCCACCTCTTGTTTCTGGGTCCCTGCTCCCCTTTGGGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
3UTR CCA 72 bp GCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTaGGCACTGTATCCACAGAAATGCATTATTTCTCCC +
Preference number: 3 (lower is better)
Translates to: AGRIPFPSGGGR*ALYPQKCIISP
Trigger: GGGAGAAATAATGCATTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp CGCGAAGGCAGCGGTGGACACGACGCTGACGGCGCCAGCTGTGTCGCCCTGGCCATCGTGCCTCCCCGCTaGCAGCCTCGGCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: REGSGGHDADGASCVALAIVPPR*QPRPPD
Trigger: GTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGAT...GGCCAGGGCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACCGCTGCCTTCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR TCA 90 bp CGCGAAGGCAGCGGTGGACACGACGCTGACGGCGCCAGCTGTGTCGCCCTGGCCCGGTGGACACGACGCTaGCGGCGCCAGCTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: REGSGGHDADGASCVALARWTRR*RRQLCR
Trigger: GCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACCG...GGCCAGGGCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACCGCTGCCTTCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGATCGTGCCTCCCCGCTaGCAGCCTCGGCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLIVPPR*QPRPPD
Trigger: GTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGAT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCGGTGGACACGACGCTaGCGGCGCCAGCTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLRWTRR*RRQLCR
Trigger: GCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACCG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCGTCCCCGCCTTCCTaGAGCTCGACGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPSPPS*SSTPSS
Trigger: GGAGGAGGGCGTCGAGCTGCAGGAAGGCGGGGACGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGTCCCTTGTCGTGGCTaGCGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLVPCRG*RRQQRW
Trigger: CCACCGCTGCTGCCGCCGCCAGCCACGACAAGGGAC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TCGTGCCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATTGCTGAAGGGGTCCCTTGTCGTGGCTaGCGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SCLPADSLGRRTATIAEGVPCRG*RRQQRW
Trigger: CCACCGCTGCTGCCGCCGCCAGCCACGACAAGGGAC...CCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTCGGGTCCCTTGTCGTaGCTGGCGGCGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSGPLS*LAAAAA
Trigger: CGCTGCTGCCGCCGCCAGCCACGACAAGGGACCCGA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGCCGTCCCCGCCTTCCTaGAGCTCGACGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRPSPPS*SSTPSS
Trigger: GGAGGAGGGCGTCGAGCTGCAGGAAGGCGGGGACGG...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCAGCGGGAAGGGCGCTaGAGGACCTGGGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLQREGR*RTWGHR
Trigger: TCTGTGCCCCCAGGTCCTGCAGCGCCCTTCCCGCTG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGGCGTCACTGCCGGGTaGCCTCGCCCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLGVTAG*PRPPSP
Trigger: TGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCGAACGCCGCCTGCTaGACGCTGGTGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPNAAC*TLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCAGCGCCTTGCATCTaGGGCTCCTGGGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPAPCI*GSWALT
Trigger: GGTCAGGGCCCAGGAGCCCCAGATGCAAGGCGCTGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCTGCTGGACGCTGGTaGTGGCCACCGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPAGRW*WPPLSA
Trigger: AGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTATCGTGCCTCCCCGCTaGCAGCCTCGGCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRIVPPR*QPRPPD
Trigger: GTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGAT...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GGCAGCGGTGGACACGACGCTGACGGCGCCAGCTGTGTCGCCCTGGCCGTCCAGAAGCACTCACCTTCCTaGAGCTCGACGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSGGHDADGASCVALAVQKHSPS*SSTPSS
Trigger: GGAGGAGGGCGTCGAGCTGCAGGAAGGTGAGTGCTT...CTGGACGGCCAGGGCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACCGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCCGCACCCACCTGCTaGCTCAGGAGCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPAPTC*LRSSLS
Trigger: GGACAACGAGCTCCTGAGGCAGCAGGTGGGTGCGGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp AATCGTGCCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATTGCTGAAGTCGGGTCCCTTGTCGTaGCTGGCGGCGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: NRASPLTASAAGLPPLLKSGPLS*LAAAAA
Trigger: CGCTGCTGCCGCCGCCAGCCACGACAAGGGACCCGA...CTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACT +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPWPSS*PSVTWT
Trigger: AGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCGTGCCTCCCCGCTaGCAGCCTCGGCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCIVPPR*QPRPPD
Trigger: GTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGAT...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTGGGACGTGGCCTCCCTaGATAGGTCCAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVGTWPP*IGPGPG
Trigger: CCCGGGGCCTGGACCTATGCAGGGAGGCCACGTCCC...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCGTCCCTTGTCGTGGCTaGCGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFVPCRG*RRQQRW
Trigger: CCACCGCTGCTGCCGCCGCCAGCCACGACAAGGGAC...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCTGCATGCGCTGGTTaGTCTGGCGCAACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPACAG*SGATPG
Trigger: TCCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp AATCGTGCCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATTGCTGAAGCCTGCTGGACGCTGGTaGTGGCCACCGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: NRASPLTASAAGLPPLLKPAGRW*WPPLSA
Trigger: AGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGG...CTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR TCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGATCGTGCCTCCCCGCTaGCAGCCTCGGCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRIVPPR*QPRPPD
Trigger: GTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGAT...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCTGGGGCGTCATCATaGCGTAGAACTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPGASS*RRTGLQ
Trigger: CTGGAGGCCAGTTCTACGTCATGATGACGCCCCAGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTCCTCCACCCCAGGGATaGCTCCCGAGCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVPPPQG*LPSPMA
Trigger: AGCCATGGGGCTCGGGAGTCATCCCTGGGGTGGAGG...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCCGTCCCCGCCTTCCTaGAGCTCGACGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGPSPPS*SSTPSS
Trigger: GGAGGAGGGCGTCGAGCTGCAGGAAGGCGGGGACGG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTCCGTCCCCGCCTTCCTaGAGCTCGACGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCPSPPS*SSTPSS
Trigger: GGAGGAGGGCGTCGAGCTGCAGGAAGGCGGGGACGG...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTCAGCGGGAAGGGCGCTaGAGGACCTGGGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRQREGR*RTWGHR
Trigger: TCTGTGCCCCCAGGTCCTGCAGCGCCCTTCCCGCTG...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTCCAGGTTGTGCTGCTaGAGCTGGGCTCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSRLCC*SWARSR
Trigger: CCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGGGCGTCACTGCCGGGTaGCCTCGCCCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALGVTAG*PRPPSP
Trigger: TGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCC...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGGGGACGTGGCCTCCCTaGATAGGTCCAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGGTWPP*IGPGPG
Trigger: CCCGGGGCCTGGACCTATGCAGGGAGGCCACGTCCC...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGGTCCCTTGTCGTGGCTaGCGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGVPCRG*RRQQRW
Trigger: CCACCGCTGCTGCCGCCGCCAGCCACGACAAGGGAC...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGTCGGGTCCCTTGTCGTaGCTGGCGGCGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGSGPLS*LAAAAA
Trigger: CGCTGCTGCCGCCGCCAGCCACGACAAGGGACCCGA...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCCGAACGCCGCCTGCTaGACGCTGGTGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFPNAAC*TLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGG...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTCCGAACGCCGCCTGCTaGACGCTGGTGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRPNAAC*TLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGG...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLWYWML*SPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TCGTGCCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATTGCTGAAGGGTGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SCLPADSLGRRTATIAEGWYWML*SPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCA...CCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGTCTCCTGCATGCGCTaGTTGGTCTGGCGCAACTCC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLVSCMR*LVWRNS
Trigger: GGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGAC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTTGTGCTGCTGCAGCTaGGCTCGAAGCAGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLLCCCS*ARSRAF
Trigger: GAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTCCTGCTGGACGCTGGTaGTGGCCACCGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRPAGRW*WPPLSA
Trigger: AGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGG...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR TCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAATCGTGCCTCCCCGCTaGCAGCCTCGGCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRIVPPR*QPRPPD
Trigger: GTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGAT...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCTCTGTGTTCCTGTCTaGAGCACATCCTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLLCVPV*STSWGV
Trigger: GACGCCCCAGGATGTGCTTCAGACAGGAACACAGAG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGGACGATCCAGTTGTTaGTCTTGTCCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLGRSSC*SCPSAS
Trigger: GGAGGCGGAGGGACAAGATCAACAACTGGATCGTCC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCAGCGGGAAGGGCGCTaGAGGACCTGGGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGQREGR*RTWGHR
Trigger: TCTGTGCCCCCAGGTCCTGCAGCGCCCTTCCCGCTG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGAACTGGCCTCCAGCCTaGAAGCTCTGGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLNWPPA*KLWSVV
Trigger: GACCACAGACCAGAGCTTGCAGGCTGGAGGCCAGTT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSSLSI*SRSASL
Trigger: CAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGTCCAGGTTGTGCTGCTaGAGCTGGGCTCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRSRLCC*SWARSR
Trigger: CCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGA...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGATCTCCAGGTTGTGCTaGTGCAGCTGGGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLISRLC*CSWARS
Trigger: GCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGAT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGACCATCTCCAGGTTGTaGTGCTGCAGCTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLTISRL*CCSWAR
Trigger: TCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCGTCCCTTGTCGTGGCTaGCGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSVPCRG*RRQQRW
Trigger: CCACCGCTGCTGCCGCCGCCAGCCACGACAAGGGAC...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GGTGGACACGACGCTGACGGCGCCAGCTGTGTCGCCCTGGCCGTCCAGCTGACCGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: GGHDADGASCVALAVQLTVRNWY*MLWSPN
Trigger: GTTCGGCGACCACAACATCCAGTACCAGTTCCGCAC...GGTCAGCTGGACGGCCAGGGCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGCAAGCTCTGGTCTGTaGTCTGTACGGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLASSGL*SVRTQP
Trigger: CGGCTGTGTCCGTACAGACCACAGACCAGAGCTTGC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCAGCCTGCAAGCTCTaGTCTGTGGTCTGTACGGAC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPACKL*SVVCTD
Trigger: GTCCGTACAGACCACAGACCAGAGCTTGCAGGCTGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGTTGTGCTGCTGCAGCTaGGCTCGAAGCAGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRLCCCS*ARSRAF
Trigger: GAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAA...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTTCAGCTCCTCGATCTaGCGGACACGACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLFSSSI*RTRRRS
Trigger: TGACCTCCGTCGTGTCCGCCAGATCGAGGAGCTGAA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCCTGCTGGACGCTGGTaGTGGCCACCGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGPAGRW*WPPLSA
Trigger: AGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR TCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTCCTGCTGGACGCTGGTaGTGGCCACCGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCPAGRW*WPPLSA
Trigger: AGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGG...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR TCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACT +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFPWPSS*PSVTWT
Trigger: AGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGG...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR GCA 90 bp GGCCGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCAGCGGGAACAGCGGGAAGGGCGCTaGAGGACCTGGGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: GRRTATIAEGILDHSQREQREGR*RTWGHR
Trigger: TCTGTGCCCCCAGGTCCTGCAGCGCCCTTCCCGCTG...TTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGAAATAGGCAAATCGTaGCTCCCCGCTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLEIGKS*LPADSL
Trigger: GAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCGCTCCACTTCGTTGTaGTGGGCTCTTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLRSTSL*WALLLS
Trigger: TGAGAGGAGAAGAGCCCAGCACAACGAAGTGGAGCG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRSSLSI*SRSASL
Trigger: CAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCT...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGGCGTCACTGCCGGGTaGCCTCGCCCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRGVTAG*PRPPSP
Trigger: TGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCC...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGATCGGGTCCCTTGTCGTaGCTGGCGGCGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRSGPLS*LAAAAA
Trigger: CGCTGCTGCCGCCGCCAGCCACGACAAGGGACCCGA...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCCGAACGCCGCCTGCTaGACGCTGGTGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGPNAAC*TLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLVRNWY*MLWSPN
Trigger: GTTCGGCGACCACAACATCCAGTACCAGTTCCGCAC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCAGGTGGGGTGGGACGTaGCCTCCCTGCATAGGTCCA +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFRWGGT*PPCIGP
Trigger: TGGACCTATGCAGGGAGGCCACGTCCCACCCCACCT...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTAGGTGGGGTGGGACGTaGCCTCCCTGCATAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRRWGGT*PPCIGP
Trigger: TGGACCTATGCAGGGAGGCCACGTCCCACCCCACCT...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGCCCAGAAACAAGAGGTaGGGTGGGACGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALPRNKR*GGTWPP
Trigger: GGGAGGCCACGTCCCACCCCACCTCTTGTTTCTGGG...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR TCA 90 bp CTCGGCCGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCAGCGGCCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACT +
Preference number: 4 (lower is better)
Translates to: LGRRTATIAEGILDHSQRPWPSS*PSVTWT
Trigger: AGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGG...CCGCTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR TCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTCCTGGGGCGTCATCATaGCGTAGAACTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVPGASS*RRTGLQ
Trigger: CTGGAGGCCAGTTCTACGTCATGATGACGCCCCAGG...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAGACCACCGCAGACACTaGGGGTCCGGGGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRDHRRH*GSGVLT
Trigger: GGTGAGCACCCCGGACCCTCAGTGTCTGCGGTGGTC...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTCTTTGAAGGTCTCCTaGATGCGCTGGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSLKVS*MRWLVW
Trigger: CCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTGTTGGACTTTCTGCATaGAAGGGTCGGGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVVGLSA*KGRGPG
Trigger: TCCCGGCCCCCGACCCTTGCATGCAGAAAGTCCAAC...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR CCA 90 bp CTGACAGCCTCGGCCGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACACCGAACGCCGCCTGCTaGACGCTGGTGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: LTASAAGLPPLLKGFWITPNAAC*TLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGG...TGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLVSVRN*YWMLWS
Trigger: CGACCACAACATCCAGTACCAGTTCCGCACAGAGAC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTCCCACACTGGACGCTaGGAAATAGGCAAATCGTGC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSHTGR*EIGKSC
Trigger: GCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCCTGCATGCGCTGGTTaGTCTGGCGCAACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGPACAG*SGATPG
Trigger: TCCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTGTCTCCTGCATGCGCTaGTTGGTCTGGCGCAACTCC +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVVSCMR*LVWRNS
Trigger: GGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGAC...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGGTCTCCTGCATGCGCTaGTTGGTCTGGCGCAACTCC +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALVSCMR*LVWRNS
Trigger: GGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGAC...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCCCAGAAACAAGAGGTaGGGTGGGACGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGPRNKR*GGTWPP
Trigger: GGGAGGCCACGTCCCACCCCACCTCTTGTTTCTGGG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGATCCCTCCTTTACTCTaGGGGGCGAGGGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALIPPLL*GARGPG
Trigger: TCCTGGTCCCCTCGCCCCCCAGAGTAAAGGAGGGAT...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGACTGCCACCATTGCTaGAGGGATTTTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLDCHHC*RDFGSQ
Trigger: CTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR TCA 90 bp TCGTGCCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATTGCTGAAGGGGACTGCCACCATTGCTaGAGGGATTTTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: SCLPADSLGRRTATIAEGDCHHC*RDFGSQ
Trigger: CTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTC...CCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR TCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCCTGGGGCGTCATCATaGCGTAGAACTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGPGASS*RRTGLQ
Trigger: CTGGAGGCCAGTTCTACGTCATGATGACGCCCCAGG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp CTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGCCTGGGGCGTCATCATaGCGTAGAACTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVNAPEASAKLGHIRARRPGASS*RRTGLQ
Trigger: CTGGAGGCCAGTTCTACGTCATGATGACGCCCCAGG...CCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR TCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTCTCTGTGTTCCTGTCTaGAGCACATCCTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVLCVPV*STSWGV
Trigger: GACGCCCCAGGATGTGCTTCAGACAGGAACACAGAG...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTAACTGGCCTCCAGCCTaGAAGCTCTGGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRNWPPA*KLWSVV
Trigger: GACCACAGACCAGAGCTTGCAGGCTGGAGGCCAGTT...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCAACTGGCCTCCAGCCTaGAAGCTCTGGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFNWPPA*KLWSVV
Trigger: GACCACAGACCAGAGCTTGCAGGCTGGAGGCCAGTT...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTACTCGCTCCCGTCTTaGTGTTGTCTGCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLYSLPS*CCLRYS
Trigger: ACTGTAACGCAGACAACAGCAAGACGGGAGCGAGTA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCAGCTCCTCGATCTGCTaGCTCAGGAGCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFSSSIC*LRSSLS
Trigger: GGACAACGAGCTCCTGAGGCAGCAGATCGAGGAGCT...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTAGCTCCTCGATCTGCTaGCTCAGGAGCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVSSSIC*LRSSLS
Trigger: GGACAACGAGCTCCTGAGGCAGCAGATCGAGGAGCT...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCATCTCCAGGTTGTGCTaGTGCAGCTGGGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFISRLC*CSWARS
Trigger: GCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGAT...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGACCATCTCCAGGTTGTaGTGCTGCAGCTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALTISRL*CCSWAR
Trigger: TCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGT...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAAGGCGTCACTGCCGGGTaGCCTCGCCCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GRIPFPSGGGRWALYPQKGVTAG*PRPPSP
Trigger: TGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCC...TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTCTGTCCCCTCCCTCTTaGCTCCAGGTGAGACCACTA +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVLSPPS*LQVRPL
Trigger: TAGTGGTCTCACCTGGAGGCAAGAGGGAGGGGACAG...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAACTGAGGGTCCGGGGTaGTCACCGCTCCCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRTEGPG*SPLPSC
Trigger: GCAAGACGGGAGCGGTGAGCACCCCGGACCCTCAGT...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTTGCTGAAGGGATTTTaGATCACAGCCAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLLLKGF*ITASGK
Trigger: CTTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGTCCCACACTGGACGCTaGGAAATAGGCAAATCGTGC +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRSHTGR*EIGKSC
Trigger: GCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGA...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTCCACTTCGTTGTGCTaGGCTCTTCTCCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSTSLC*ALLLSS
Trigger: AGATGAGAGGAGAAGAGCCCAGCACAACGAAGTGGA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTGTAATCGCAGGCCTTaGACAGGATCCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLCNRRP*TGSLLY
Trigger: GTAAAGGAGGGATCCTGTCCAAGGCCTGCGATTACA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCCCTGCATGCGCTGGTTaGTCTGGCGCAACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSPACAG*SGATPG
Trigger: TCCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGG...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCCTGCATGCGCTGGTTaGTCTGGCGCAACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGPACAG*SGATPG
Trigger: TCCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGGTCTCCTGCATGCGCTaGTTGGTCTGGCGCAACTCC +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGVSCMR*LVWRNS
Trigger: GGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGAC...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTGTCTCCTGCATGCGCTaGTTGGTCTGGCGCAACTCC +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCVSCMR*LVWRNS
Trigger: GGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGAC...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGACCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACT +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRPWPSS*PSVTWT
Trigger: AGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGG...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR TCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGACTGCCACCATTGCTaGAGGGATTTTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRDCHHC*RDFGSQ
Trigger: CTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTC...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR TCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGCCTGGGGCGTCATCATaGCGTAGAACTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRPGASS*RRTGLQ
Trigger: CTGGAGGCCAGTTCTACGTCATGATGACGCCCCAGG...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTCTCTGTGTTCCTGTCTaGAGCACATCCTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCLCVPV*STSWGV
Trigger: GACGCCCCAGGATGTGCTTCAGACAGGAACACAGAG...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGGTAAGTCTCAACTGGCCTCCAGCCTaGAAGCTCTGGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: APEASAKLGHIRARRVSLNWPPA*KLWSVV
Trigger: GACCACAGACCAGAGCTTGCAGGCTGGAGGCCAGTT...GAGACTTACCCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR GCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCGCTCCACTTCGTTGTaGTGGGCTCTTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFRSTSL*WALLLS
Trigger: TGAGAGGAGAAGAGCCCAGCACAACGAAGTGGAGCG...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTCGCTCCACTTCGTTGTaGTGGGCTCTTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVRSTSL*WALLLS
Trigger: TGAGAGGAGAAGAGCCCAGCACAACGAAGTGGAGCG...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGSSLSI*SRSASL
Trigger: CAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCT...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGAGCTCCTCGATCTGCTaGCTCAGGAGCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGSSSIC*LRSSLS
Trigger: GGACAACGAGCTCCTGAGGCAGCAGATCGAGGAGCT...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCTCCAGGTTGTGCTGCTaGAGCTGGGCTCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSSRLCC*SWARSR
Trigger: CCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGA...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGATCTCCAGGTTGTGCTaGTGCAGCTGGGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGISRLC*CSWARS
Trigger: GCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGAT...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGACCATCTCCAGGTTGTaGTGCTGCAGCTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGTISRL*CCSWAR
Trigger: TCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGT...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCTGTCCCCTCCCTCTTaGCTCCAGGTGAGACCACTA +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGLSPPS*LQVRPL
Trigger: TAGTGGTCTCACCTGGAGGCAAGAGGGAGGGGACAG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCGGCTGTTGGACTTTCTaGATGCAAGGGTCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSGCWTF*MQGSGA
Trigger: GGCCCCCGACCCTTGCATGCAGAAAGTCCAACAGCC...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR GCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTAGGCCGCTCCCGTCTTaGTGTTGTCTGCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRRPLPS*CCLRYS
Trigger: ACTGTAACGCAGACAACAGCAAGACGGGAGCGGCCT...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595068.5
CDS-3UTR CCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCTGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSWYWML*SPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCA...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGTTGCTGAAGGGATTTTaGATCACAGCCAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRLLKGF*ITASGK
Trigger: CTTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAA...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR CCA 90 bp CTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGGCAAGCTCTGGTCTGTaGTCTGTACGGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: LVNAPEASAKLGHIRARRASSGL*SVRTQP
Trigger: CGGCTGTGTCCGTACAGACCACAGACCAGAGCTTGC...CCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGTGTAATCGCAGGCCTTaGACAGGATCCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRCNRRP*TGSLLY
Trigger: GTAAAGGAGGGATCCTGTCCAAGGCCTGCGATTACA...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000599471.5
CDS-3UTR CCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTTTGTGCTGCTGCAGCTaGGCTCGAAGCAGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGLCCCS*ARSRAF
Trigger: GAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAA...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGTTGTGCTGCTGCAGCTaGGCTCGAAGCAGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRLCCCS*ARSRAF
Trigger: GAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAA...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCAGTGGAGGAGGGCGGTaGGCACTGTATCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFSGGGR*ALYPQK
Trigger: TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACT...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTCGACAGACAGACGGATaGGCAGGGAGGATACCGTTT +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRRQTDG*AGRIPF
Trigger: AAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCG...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGACCCAGAAACAAGAGGTaGGGTGGGACGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRPRNKR*GGTWPP
Trigger: GGGAGGCCACGTCCCACCCCACCTCTTGTTTCTGGG...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGAAGGCGGGGGCCACATaGGGCCAGTTTATTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALKAGAT*GQFIAV
Trigger: AACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTT...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS-3UTR CCA 90 bp AGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGGTAAGTCTCATCGACCGCCTCCGCTCCACTaGGGGGACATTCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RSFRQARTHSGPSGKSHRPPPLH*GDILPD
Trigger: GTCAGGCAGAATGTCCCCCCAGTGGAGCGGAGGCGG...TCGATGAGACTTACCCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTGAGCCCCATGGCTGTTaGACTTTCTGCATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVEPHGC*TFCMQG
Trigger: CCCTTGCATGCAGAAAGTCCAACAGCCATGGGGCTC...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR CCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTGACTCCCGAGCCCCATaGCTGTTGGACTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRDSRAP*LLDFLH
Trigger: ATGCAGAAAGTCCAACAGCCATGGGGCTCGGGAGTC...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR TCA 90 bp ACAAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTCGGTGGACACGACGCTaGCGGCGCCAGCTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: TRRGPHGASLLQLNTSLSRWTRR*RRQLCR
Trigger: GCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACCG...AGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS-3UTR TCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCTCTGTGTTCCTGTCTaGAGCACATCCTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGLCVPV*STSWGV
Trigger: GACGCCCCAGGATGTGCTTCAGACAGGAACACAGAG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp TGTCCTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGCTCTGTGTTCCTGTCTaGAGCACATCCTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: CPRQCPRSFRQARTHSGPLCVPV*STSWGV
Trigger: GACGCCCCAGGATGTGCTTCAGACAGGAACACAGAG...CGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR TCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCGGACGATCCAGTTGTTaGTCTTGTCCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSGRSSC*SCPSAS
Trigger: GGAGGCGGAGGGACAAGATCAACAACTGGATCGTCC...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCGTTACAGTCTGGAATaGTTTTCGAAAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLRYSLE*FSKAGR
Trigger: TCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGGAAATAGGCAAATCGTaGCTCCCCGCTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGEIGKS*LPADSL
Trigger: GAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTC...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCAACTGGCCTCCAGCCTaGAAGCTCTGGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSNWPPA*KLWSVV
Trigger: GACCACAGACCAGAGCTTGCAGGCTGGAGGCCAGTT...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCGTCTTGCTGTTGTCTaGGTTACAGTCTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLRLAVV*VTVWND
Trigger: ATCATTCCAGACTGTAACGCAGACAACAGCAAGACG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR GCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCTCTTTGAAGGTCTCCTaGATGCGCTGGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFSLKVS*MRWLVW
Trigger: CCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGA...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGSSLSI*SRSASL
Trigger: CAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCT...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTACCATCTCCAGGTTGTaGTGCTGCAGCTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGTISRL*CCSWAR
Trigger: TCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGT...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACCATCTCCAGGTTGTaGTGCTGCAGCTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSTISRL*CCSWAR
Trigger: TCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGT...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGCTGTCCCCTCCCTCTTaGCTCCAGGTGAGACCACTA +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRLSPPS*LQVRPL
Trigger: TAGTGGTCTCACCTGGAGGCAAGAGGGAGGGGACAG...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVVSVRN*YWMLWS
Trigger: CGACCACAACATCCAGTACCAGTTCCGCACAGAGAC...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCTCCCACACTGGACGCTaGGAAATAGGCAAATCGTGC +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFSHTGR*EIGKSC
Trigger: GCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGA...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTCCCACACTGGACGCTaGGAAATAGGCAAATCGTGC +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRSHTGR*EIGKSC
Trigger: GCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGA...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGCAAGCTCTGGTCTGTaGTCTGTACGGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGASSGL*SVRTQP
Trigger: CGGCTGTGTCCGTACAGACCACAGACCAGAGCTTGC...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCCAGCCTGCAAGCTCTaGTCTGTGGTCTGTACGGAC +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGPACKL*SVVCTD
Trigger: GTCCGTACAGACCACAGACCAGAGCTTGCAGGCTGG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCCCAGCCTGCAAGCTCTaGTCTGTGGTCTGTACGGAC +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSPACKL*SVVCTD
Trigger: GTCCGTACAGACCACAGACCAGAGCTTGCAGGCTGG...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GTCCTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCCAGCCTGCAAGCTCTaGTCTGTGGTCTGTACGGAC +
Preference number: 4 (lower is better)
Translates to: VLVNAPEASAKLGHIRARPACKL*SVVCTD
Trigger: GTCCGTACAGACCACAGACCAGAGCTTGCAGGCTGG...ACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGCCAGCCTGCAAGCTCTaGTCTGTGGTCTGTACGGAC +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRPACKL*SVVCTD
Trigger: GTCCGTACAGACCACAGACCAGAGCTTGCAGGCTGG...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGGTTCCATCAATTTTTaGAGAGTAAGGGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLGSINF*RVRVCP
Trigger: CGGACACACCCTTACTCTCCAAAAATTGATGGAACC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCATCTCGGGGTGTTCTaGTTCCATCAATTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLHLGVF*FHQFLE
Trigger: CTCCAAAAATTGATGGAACCAGAACACCCCGAGATG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTAGTGGAGGAGGGCGGTaGGCACTGTATCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCSGGGR*ALYPQK
Trigger: TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACT...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCGACAGACAGACGGATaGGCAGGGAGGATACCGTTT +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGRQTDG*AGRIPF
Trigger: AAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGGACTGCCACCATTGCTaGAGGGATTTTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALDCHHC*RDFGSQ
Trigger: CTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTC...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR TCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGACTCTGTGTTCCTGTCTaGAGCACATCCTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRLCVPV*STSWGV
Trigger: GACGCCCCAGGATGTGCTTCAGACAGGAACACAGAG...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAGGACGATCCAGTTGTTaGTCTTGTCCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRGRSSC*SCPSAS
Trigger: GGAGGCGGAGGGACAAGATCAACAACTGGATCGTCC...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCGAAATAGGCAAATCGTaGCTCCCCGCTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSEIGKS*LPADSL
Trigger: GAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTC...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCGCTCCACTTCGTTGTaGTGGGCTCTTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGRSTSL*WALLLS
Trigger: TGAGAGGAGAAGAGCCCAGCACAACGAAGTGGAGCG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTACTCGCTCCCGTCTTaGTGTTGTCTGCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALYSLPS*CCLRYS
Trigger: ACTGTAACGCAGACAACAGCAAGACGGGAGCGAGTA...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000343550.9
CDS-3UTR GCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTTCTTTGAAGGTCTCCTaGATGCGCTGGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCSLKVS*MRWLVW
Trigger: CCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGA...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRSSLSI*SRSASL
Trigger: CAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCT...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGTCACCGCTCCCGTCTTaGTGTTGTCTGCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGSPLPS*CCLRYS
Trigger: ACTGTAACGCAGACAACAGCAAGACGGGAGCGGTGA...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS-3UTR CCA 90 bp GGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAATGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRIPFPSGGGRWALYPQKWYWML*SPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCA...TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSVRNWY*MLWSPN
Trigger: GTTCGGCGACCACAACATCCAGTACCAGTTCCGCAC...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCVSVRN*YWMLWS
Trigger: CGACCACAACATCCAGTACCAGTTCCGCACAGAGAC...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGVSVRN*YWMLWS
Trigger: CGACCACAACATCCAGTACCAGTTCCGCACAGAGAC...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAGCAAGCTCTGGTCTGTaGTCTGTACGGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRASSGL*SVRTQP
Trigger: CGGCTGTGTCCGTACAGACCACAGACCAGAGCTTGC...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGACCAGCCTGCAAGCTCTaGTCTGTGGTCTGTACGGAC +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRPACKL*SVVCTD
Trigger: GTCCGTACAGACCACAGACCAGAGCTTGCAGGCTGG...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGGTTCCATCAATTTTTaGAGAGTAAGGGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRGSINF*RVRVCP
Trigger: CGGACACACCCTTACTCTCCAAAAATTGATGGAACC...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCACTTCGTTGTGCTaGGCTCTTCTCCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: VRAGRRATDRRMGREDTVSTSLC*ALLLSS
Trigger: AGATGAGAGGAGAAGAGCCCAGCACAACGAAGTGGA...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGTCTGCGTTACAGTCTaGAATGATTTTCGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: WRASLPGALAHHLQVVLLVCVTV*NDFRKL
Trigger: CAGCTTTCGAAAATCATTCCAGACTGTAACGCAGAC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCTGTAATCGCAGGCCTTaGACAGGATCCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFCNRRP*TGSLLY
Trigger: GTAAAGGAGGGATCCTGTCCAAGGCCTGCGATTACA...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000599471.5
CDS-3UTR CCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGAGTGGAGGAGGGCGGTaGGCACTGTATCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRSGGGR*ALYPQK
Trigger: TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACT...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCGACAGACAGACGGATaGGCAGGGAGGATACCGTTT +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGRQTDG*AGRIPF
Trigger: AAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTGACTGCCACCATTGCTaGAGGGATTTTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCDCHHC*RDFGSQ
Trigger: CTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTC...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGACGCTCCACTTCGTTGTaGTGGGCTCTTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRRSTSL*WALLLS
Trigger: TGAGAGGAGAAGAGCCCAGCACAACGAAGTGGAGCG...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAAATCTCCAGGTTGTGCTaGTGCAGCTGGGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GRIPFPSGGGRWALYPQKISRLC*CSWARS
Trigger: GCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGAT...TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAACTGTCCCCTCCCTCTTaGCTCCAGGTGAGACCACTA +
Preference number: 4 (lower is better)
Translates to: GRIPFPSGGGRWALYPQKLSPPS*LQVRPL
Trigger: TAGTGGTCTCACCTGGAGGCAAGAGGGAGGGGACAG...TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCAGCGGGAAGGGGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: RRTATIAEGILDHSQREGVSVRN*YWMLWS
Trigger: CGACCACAACATCCAGTACCAGTTCCGCACAGAGAC...CCCTTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGTTGCTGAAGGGATTTTaGATCACAGCCAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGLLKGF*ITASGK
Trigger: CTTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAA...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR CCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAGTGGAGGAGGGCGGTaGGCACTGTATCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRSGGGR*ALYPQK
Trigger: TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACT...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGACGACAGACAGACGGATaGGCAGGGAGGATACCGTTT +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRRQTDG*AGRIPF
Trigger: AAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCG...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTCGGTGGACACGACGCTaGCGGCGCCAGCTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFRWTRR*RRQLCR
Trigger: GCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACCG...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR TCA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTCGTTACAGTCTGGAATaGTTTTCGAAAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRRYSLE*FSKAGR
Trigger: TCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACG...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTTCGGGTCCCTTGTCGTaGCTGGCGGCGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFSGPLS*LAAAAA
Trigger: CGCTGCTGCCGCCGCCAGCCACGACAAGGGACCCGA...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp AGCCTCGGCCGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCAGTTGCTGAAGGGATTTTaGATCACAGCCAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLGRRTATIAEGILDHSQLLKGF*ITASGK
Trigger: CTTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAA...CTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CCA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCATCTCGGGGTGTTCTaGTTCCATCAATTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFHLGVF*FHQFLE
Trigger: CTCCAAAAATTGATGGAACCAGAACACCCCGAGATG...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTTCCACTTCGTTGTGCTaGGCTCTTCTCCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGSTSLC*ALLLSS
Trigger: AGATGAGAGGAGAAGAGCCCAGCACAACGAAGTGGA...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCTCCACTTCGTTGTGCTaGGCTCTTCTCCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSSTSLC*ALLLSS
Trigger: AGATGAGAGGAGAAGAGCCCAGCACAACGAAGTGGA...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGTCCACTTCGTTGTGCTaGGCTCTTCTCCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRSTSLC*ALLLSS
Trigger: AGATGAGAGGAGAAGAGCCCAGCACAACGAAGTGGA...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGTTGCTGAAGGGATTTTaGATCACAGCCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGLLKGF*ITACPP
Trigger: TGGAGGACAGGCTGTGATCCAAAATCCCTTCAGCAA...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS-3UTR TCA 90 bp ACAAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTCCTGGGGCGTCATCATaGCGTAGAACTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TRRGPHGASLLQLNTSLSPGASS*RRTGLQ
Trigger: CTGGAGGCCAGTTCTACGTCATGATGACGCCCCAGG...AGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS-3UTR TCA 90 bp CTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGCGTTACAGTCTGGAATaGTTTTCGAAAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: LVNAPEASAKLGHIRARRRYSLE*FSKAGR
Trigger: TCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACG...CCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR GCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCTCCATTTGTCTCTGTaGGGAACTGGTACTGGATGT +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGLHLSL*GTGTGC
Trigger: ACATCCAGTACCAGTTCCGCACAGAGACAAATGGAG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTCGTCTTGCTGTTGTCTaGGTTACAGTCTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCRLAVV*VTVWND
Trigger: ATCATTCCAGACTGTAACGCAGACAACAGCAAGACG...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGGTAAGTCTCCGTCTTGCTGTTGTCTaGGTTACAGTCTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: APEASAKLGHIRARRVSLRLAVV*VTVWND
Trigger: ATCATTCCAGACTGTAACGCAGACAACAGCAAGACG...GAGACTTACCCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR GCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGATACTCGCTCCCGTCTTaGTGTTGTCTGCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRYSLPS*CCLRYS
Trigger: ACTGTAACGCAGACAACAGCAAGACGGGAGCGAGTA...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000343550.9
CDS-3UTR CCA 90 bp AGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGGTAAGTCTCATCGATCCCACACTGGACGCTaGGAAATAGGCAAATCGTGC +
Preference number: 4 (lower is better)
Translates to: RSFRQARTHSGPSGKSHRSHTGR*EIGKSC
Trigger: GCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGA...TCGATGAGACTTACCCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTCATCTCGGGGTGTTCTaGTTCCATCAATTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCHLGVF*FHQFLE
Trigger: CTCCAAAAATTGATGGAACCAGAACACCCCGAGATG...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGGTCTGCGTTACAGTCTaGAATGATTTTCGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALVCVTV*NDFRKL
Trigger: CAGCTTTCGAAAATCATTCCAGACTGTAACGCAGAC...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR TCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCCGTTACAGTCTGGAATaGTTTTCGAAAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSRYSLE*FSKAGR
Trigger: TCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACG...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCGTCTTGCTGTTGTCTaGGTTACAGTCTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGRLAVV*VTVWND
Trigger: ATCATTCCAGACTGTAACGCAGACAACAGCAAGACG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCCGTCTTGCTGTTGTCTaGGTTACAGTCTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSRLAVV*VTVWND
Trigger: ATCATTCCAGACTGTAACGCAGACAACAGCAAGACG...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp ACAAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTAGCTCCTCGATCTGCTaGCTCAGGAGCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: TRRGPHGASLLQLNTSLSSSSIC*LRSSLS
Trigger: GGACAACGAGCTCCTGAGGCAGCAGATCGAGGAGCT...AGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS-3UTR GCA 90 bp AGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGGTAAGTCTCATCGACAAGGAACTTCGTTGTaGTGGGCTCTTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RSFRQARTHSGPSGKSHRQGTSL*WALLLS
Trigger: TGAGAGGAGAAGAGCCCAGCACAACGAAGTTCCTTG...TCGATGAGACTTACCCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CCA 90 bp ACAAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTGCAAGCTCTGGTCTGTaGTCTGTACGGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: TRRGPHGASLLQLNTSLSASSGL*SVRTQP
Trigger: CGGCTGTGTCCGTACAGACCACAGACCAGAGCTTGC...AGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS-3UTR CCA 90 bp GTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGGTAGGTTCCATCAATTTTTaGAGAGTAAGGGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: VNAPEASAKLGHIRARRVGSINF*RVRVCP
Trigger: CGGACACACCCTTACTCTCCAAAAATTGATGGAACC...TACCCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CCA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGGTTCCATCAATTTTTaGAGAGTAAGGGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: RATDRRMGREDTVSKWRRGSINF*RVRVCP
Trigger: CGGACACACCCTTACTCTCCAAAAATTGATGGAACC...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp GGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAATGTAATCGCAGGCCTTaGACAGGATCCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: GRIPFPSGGGRWALYPQKCNRRP*TGSLLY
Trigger: GTAAAGGAGGGATCCTGTCCAAGGCCTGCGATTACA...TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000599471.5
CDS-3UTR TCA 90 bp CGCTCCCGTCTTGCTGTTGTCTGCGTTACAGTCTGGAATGATTTTCGAAAGCTGGGACGATCCAGTTGTTaGTCTTGTCCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSRLAVVCVTVWNDFRKLGRSSC*SCPSAS
Trigger: GGAGGCGGAGGGACAAGATCAACAACTGGATCGTCC...CAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CCA 90 bp ACAAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: TRRGPHGASLLQLNTSLSVRNWY*MLWSPN
Trigger: GTTCGGCGACCACAACATCCAGTACCAGTTCCGCAC...AGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS-3UTR CCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCGTCTGCGTTACAGTCTaGAATGATTTTCGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSVCVTV*NDFRKL
Trigger: CAGCTTTCGAAAATCATTCCAGACTGTAACGCAGAC...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTCCTGCATGCGCTGGTTaGTCTGGCGCAACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFPACAG*SGATPG
Trigger: TCCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGG...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR TCA 90 bp GGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAACGTTACAGTCTGGAATaGTTTTCGAAAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: GRIPFPSGGGRWALYPQKRYSLE*FSKAGR
Trigger: TCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACG...TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTTCCAGGTTGTGCTGCTaGAGCTGGGCTCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFSRLCC*SWARSR
Trigger: CCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGA...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTCTGTATCCACAGAAATaGATTATTTCTCCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCLYPQK*IISPRF
Trigger: AAAACGGGGAGAAATAATGCATTTCTGTGGATACAG...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTTGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFWYWML*SPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCA...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp GGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAAGGTTCCATCAATTTTTaGAGAGTAAGGGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GRIPFPSGGGRWALYPQKGSINF*RVRVCP
Trigger: CGGACACACCCTTACTCTCCAAAAATTGATGGAACC...TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAGTCTGCGTTACAGTCTaGAATGATTTTCGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRVCVTV*NDFRKL
Trigger: CAGCTTTCGAAAATCATTCCAGACTGTAACGCAGAC...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTTTGTGCTGCTGCAGCTaGGCTCGAAGCAGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFLCCCS*ARSRAF
Trigger: GAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAA...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTAACTGGCCTCCAGCCTaGAAGCTCTGGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFNWPPA*KLWSVV
Trigger: GACCACAGACCAGAGCTTGCAGGCTGGAGGCCAGTT...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTCTGTATCCACAGAAATaGATTATTTCTCCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGLYPQK*IISPRF
Trigger: AAAACGGGGAGAAATAATGCATTTCTGTGGATACAG...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR GCA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCCTGTATCCACAGAAATaGATTATTTCTCCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSLYPQK*IISPRF
Trigger: AAAACGGGGAGAAATAATGCATTTCTGTGGATACAG...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTGCAAGCTCTGGTCTGTaGTCTGTACGGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFASSGL*SVRTQP
Trigger: CGGCTGTGTCCGTACAGACCACAGACCAGAGCTTGC...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTGAAATAGGCAAATCGTaGCTCCCCGCTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFEIGKS*LPADSL
Trigger: GAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTC...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR GCA 90 bp CGTCTTGCTGTTGTCTGCGTTACAGTCTGGAATGATTTTCGAAAGCTGGACGATACCTGTCCTCGTCAATaGCCCAGAAGCTTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: RLAVVCVTVWNDFRKLDDTCPRQ*PRSFRQ
Trigger: TTGGCGGAAGCTTCTGGGGCATTGACGAGGACAGGT...ATCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR GCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTTCTTTGAAGGTCTCCTaGATGCGCTGGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFSLKVS*MRWLVW
Trigger: CCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGA...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp AAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATCATCTCGGGGTGTTCTaGTTCCATCAATTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: KAGATWGQFIAVKYLSLYHLGVF*FHQFLE
Trigger: CTCCAAAAATTGATGGAACCAGAACACCCCGAGATG...ATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS-3UTR CCA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTCATCTCGGGGTGTTCTaGTTCCATCAATTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFHLGVF*FHQFLE
Trigger: CTCCAAAAATTGATGGAACCAGAACACCCCGAGATG...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CCA 90 bp CGTCTTGCTGTTGTCTGCGTTACAGTCTGGAATGATTTTCGAAAGCTGGACGATCATCTCGGGGTGTTCTaGTTCCATCAATTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RLAVVCVTVWNDFRKLDDHLGVF*FHQFLE
Trigger: CTCCAAAAATTGATGGAACCAGAACACCCCGAGATG...ATCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CCA 90 bp CGTCTTGCTGTTGTCTGCGTTACAGTCTGGAATGATTTTCGAAAGCTGGACGATGTCTGCGTTACAGTCTaGAATGATTTTCGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RLAVVCVTVWNDFRKLDDVCVTV*NDFRKL
Trigger: CAGCTTTCGAAAATCATTCCAGACTGTAACGCAGAC...ATCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS GCA 90 bp GGGCTGGGGAAGGGGGCAGCAGAGGCCGGCGTGGGCGGCGGCGGCTaGGTGGTGGTGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCA +
Preference number: 5 (lower is better)
Translates to: GLGKGAAEAGVGGGG*VVVAGVTAGCPRPP
Trigger: TGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCACCACCACGCAGCCGCCGCCGCCCACGCCGGCCTCTGCTGCCCCCTTCCCCAGCCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000600341.5
ENST00000607959.5
CDS GCA 90 bp CCAGCCCTCCCCGGGCGCGGCCGGCCCGGCAAGCACTCACCTTCCTaGAGCTCGACGCCCTCCTCCGCCTCGGGTCCCTTGTCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PALPGRGRPGKHSPS*SSTPSSASGPLSWL
Trigger: CAGCCACGACAAGGGACCCGAGGCGGAGGAGGGCGTCGAGCTGCAGGAAGGTGAGTGCTTGCCGGGCCGGCCGCGCCCGGGGAGGGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTCCGCCTCGGGTCCCTaGTCGTGGCTGGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSASGP*SWLAAA
Trigger: TGCCGCCGCCAGCCACGACAAGGGACCCGAGGCGGA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS CCA 90 bp CCGCTGGCGCAGTCCCCAGCAGAGCGCTCCTCGCCCAGGGGTCTGTaGAGGAACTCGGCAGGCGGCCTCGTTTCAGCCTCTGCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: PLAQSPAERSSPRGL*RNSAGGLVSASALP
Trigger: TGGGAGGGCAGAGGCTGAAACGAGGCCGCCTGCCGAGTTCCTCCACAGACCCCTGGGCGAGGAGCGCTCTGCTGGGGACTGCGCCAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS TCA 90 bp GGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTaGTGGCCACCGCTGTCTGCTCCTCCGCTCCTGGGCCGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: GTGCCGRRTPPAGRW*WPPLSAPPLLGRPR
Trigger: GCGGGGACGGCCCAGGAGCGGAGGAGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTCCTGCATGCGCTGGTaGGTCTGGCGCAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSCMRW*VWRNSR
Trigger: CCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGGA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS GCA 90 bp CAGGGGTCTGTGGAGGAACTCGGCAGGCGGCCTCGTTTCAGCCTCTaGCCTCCCACAGTCCTCTCGAGAGCTGGGCGCCGGCTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: QGSVEELGRRPRFSL*PPTVLSRAGRRLQV
Trigger: TACCTGCAGCCGGCGCCCAGCTCTCGAGAGGACTGTGGGAGGGCAGAGGCTGAAACGAGGCCGCCTGCCGAGTTCCTCCACAGACCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGAGCCGCTCGGCCTCTTaGAAGGTCTCCTGCATGCGC +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSRSAS*KVSCMR
Trigger: GCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTGCCTCAGGAGCTCGTaGTCCATCTGCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLCLRSS*SICSRS
Trigger: CGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCCCACCATCTCCAGGTaGTGCTGCTGCAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLPTISR*CCCSWA
Trigger: AGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS TCA 90 bp GACACGACGCTGACGGCGCCAGCTGTGTCGCCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACTACGCGGTATGTCACCTGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: DTTLTAPAVSPWPSS*PSVTWTTRYVTCRG
Trigger: CCCCCTGCAGGTGACATACCGCGTAGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGGCGACACAGCTGGCGCCGTCAGCGTCGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593708.1
CDS GCA 90 bp GGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTaGTGCTGCAGCTGGGCTCGAAGCAGGGCGTTCTCATTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GGRHCRVPSPTISRL*CCSWARSRAFSFFS
Trigger: GCTGAAGAATGAGAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000594064.5
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS CCA 90 bp GTGCGGAACTGGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGCTaGACGCTGGTGATGGCCACCGCTGTCTGCTCCTCCGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VRNWYWMLWSPNAAC*TLVMATAVCSSAPG
Trigger: CCCAGGAGCGGAGGAGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
CDS-3UTR CAA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTTCCGCCTCGGGTCCCTaGTCGTGGCTGGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGSASGP*SWLAAA
Trigger: TGCCGCCGCCAGCCACGACAAGGGACCCGAGGCGGA...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CAA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGTCCGCCTCGGGTCCCTaGTCGTGGCTGGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RATDRRMGREDTVSKWRRSASGP*SWLAAA
Trigger: TGCCGCCGCCAGCCACGACAAGGGACCCGAGGCGGA...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CAA 90 bp AGCCTCGGCCGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCAGTCCGCCTCGGGTCCCTaGTCGTGGCTGGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: SLGRRTATIAEGILDHSQSASGP*SWLAAA
Trigger: TGCCGCCGCCAGCCACGACAAGGGACCCGAGGCGGA...CTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCC +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLNWYWM*WSPNAA
Trigger: GGCGGCGTTCGGCGACCACAACATCCAGTACCAGTT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGCTCCGCTCCACTTCGTaGTGCTGGGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLLRSTS*CWALLL
Trigger: GAGGAGAAGAGCCCAGCACAACGAAGTGGAGCGGAG...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGCCCACCATCTCCAGGTaGTGCTGCTGCAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRPTISR*CCCSWA
Trigger: AGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGG...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS TCA 90 bp AGGAGCCTTAGGGCAGGCACCGCCCACCGGCCTCCACCCCAGGGATaGCTCCCGAGCCCCATGGCTGTTGGACTTTCTGCATGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: RSLRAGTAHRPPPQG*LPSPMAVGLSACKG
Trigger: ACCCTTGCATGCAGAAAGTCCAACAGCCATGGGGCTCGGGAGTCATCCCTGGGGTGGAGGCCGGTGGGCGGTGCCTGCCCTAAGGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000599471.5
CDS GCA 90 bp GGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTaGTGCAGCTGGGCTCGAAGCAGGGCGTTCTCATTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRHCRVPSPTISRLC*CSWARSRAFSFFSS
Trigger: GGAGCTGAAGAATGAGAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000594064.5
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS GCA 90 bp GCACTGTCCCCAGGTTTCACGGTGCACAACAGGGATCTGGCCCCATaGAGCCTGAGGCCTGAAGGCAGCATCCGCTGGGCGACACCTGCC +
Preference number: 5 (lower is better)
Translates to: ALSPGFTVHNRDLAP*SLRPEGSIRWATPA
Trigger: GGCAGGTGTCGCCCAGCGGATGCTGCCTTCAGGCCTCAGGCTGCATGGGGCCAGATCCCTGTTGTGCACCGTGAAACCTGGGGACAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607959.5
CDS GCA 90 bp CCAGGCCCCGCACCCACCTGCTGCCTCAGGAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTGAAGGTCTCCTGCATGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PGPAPTCCLRSSLSI*SRSASLKVSCMRWL
Trigger: CAACCAGCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCAGCAGGTGGGTGCGGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS GCA 90 bp CAAGGGTCGGGGGCCGGGACCACCGCAGACACTGAGGGTCCGGGGTaGTCACCGCTCCCGTCTTGCTGTTGTCTGCGTTACAGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: QGSGAGTTADTEGPG*SPLPSCCCLRYSLE
Trigger: TTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCGGTGAGCACCCCGGACCCTCAGTGTCTGCGGTGGTCCCGGCCCCCGACCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000599471.5
CDS CCA 90 bp CGCGGCCCGCCGCTCACCTGTCCTCCATTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTG +
Preference number: 5 (lower is better)
Translates to: RGPPLTCPPFVSVRN*YWMLWSPNAACWTL
Trigger: CAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGAGCGGCGGGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593708.1
CDS-3UTR CAA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCC +
Preference number: 5 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRNWYWM*WSPNAA
Trigger: GGCGGCGTTCGGCGACCACAACATCCAGTACCAGTT...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CAA 90 bp GGCAGCGGTGGACACGACGCTGACGGCGCCAGCTGTGTCGCCCTGGCCGTCCAGTCACCTGTCCTCCATTaGTCTCTGTGCGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: GSGGHDADGASCVALAVQSPVLH*SLCGTG
Trigger: ACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGA...CTGGACGGCCAGGGCGACACAGCTGGCGCCGTCAGCGTCGTGTCCACCGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGATCCAGTTGTTGATCTaGTCCCTCCGCCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLIQLLI*SLRLRS
Trigger: GGAGCGGAGGCGGAGGGACAAGATCAACAACTGGAT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTCCTGCATGCGCTGGTaGGTCTGGCGCAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALSCMRW*VWRNSR
Trigger: CCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGGA...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS TCA 90 bp GACACGACGCTGACGGCGCCAGCTGTGTCGCCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACTACGCGGTATGTCACCTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: DTTLTAPAVSPWPSS*PSVTWTTRYVTCPP
Trigger: TGGAGGACAGGTGACATACCGCGTAGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGGCGACACAGCTGGCGCCGTCAGCGTCGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222305.8
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS TCA 90 bp GCCTCCGCTCCACTGCGGAAAACAGAGTCACAGCCACGGCTTCGCTaGCGGATCATGCCTGAGCGGCCGTCCTCACAGGGCAGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: ASAPLRKTESQPRLR*RIMPERPSSQGRGS
Trigger: TGAGCCTCTGCCCTGTGAGGACGGCCGCTCAGGCATGATCCGTCAGCGAAGCCGTGGCTGTGACTCTGTTTTCCGCAGTGGAGCGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000600898.1
CDS GCA 90 bp TCTGTGCGGAACTGGTACTGGATGTTGTGGTCGCCGAACGCCGCCTaGTGGACGCTGGTGATGGCCACCGCTGTCTGCTCCTCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: SVRNWYWMLWSPNAA*WTLVMATAVCSSAP
Trigger: AGGAGCGGAGGAGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
CDS GCA 90 bp CGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTaGAGCTGGGCTCGAAGCAGGGCGTTCTCATTCTTCAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RHCRVPSPTISRLCC*SWARSRAFSFFSSS
Trigger: CGAGGAGCTGAAGAATGAGAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000594064.5
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS GCA 90 bp TTCGCCCTCGCGGCCCGCCGCTCACCTGTCCTCCATTTGTCTCTGTaGGGAACTGGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGCT +
Preference number: 5 (lower is better)
Translates to: FALAARRSPVLHLSL*GTGTGCCGRRTPPA
Trigger: AGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGAGCGGCGGGCCGCGAGGGCGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593708.1
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATC +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLAGLPP*LKGFWI
Trigger: GATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTGGACGATCCAGTTGTaGATCTTGTCCCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLWTIQL*ILSLRL
Trigger: GAGGCGGAGGGACAAGATCAACAACTGGATCGTCCA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGGCTCCCGTCTTGCTGTaGTCTGCGTTACAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLAPVLL*SALQSG
Trigger: TCCAGACTGTAACGCAGACAACAGCAAGACGGGAGC...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGTCCTGCATGCGCTGGTaGGTCTGGCGCAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGSCMRW*VWRNSR
Trigger: CCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGGA...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTGCCTCAGGAGCTCGTaGTCCATCTGCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: VRAGRRATDRRMGREDTVCLRSS*SICSRS
Trigger: CGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCA...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTCCCACCATCTCCAGGTaGTGCTGCTGCAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRPTISR*CCCSWA
Trigger: AGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGG...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS GCA 90 bp CACTGCGGAAAACAGAGTCACAGCCACGGCTTCGCTGACGGATCATaGCTGAGCGGCCGTCCTCACAGGGCAGAGGCTCAGCCCAAGGAC +
Preference number: 5 (lower is better)
Translates to: HCGKQSHSHGFADGS*LSGRPHRAEAQPKD
Trigger: GTCCTTGGGCTGAGCCTCTGCCCTGTGAGGACGGCCGCTCAGGCATGATCCGTCAGCGAAGCCGTGGCTGTGACTCTGTTTTCCGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000600898.1
CDS CCA 90 bp AGCTGGGCTCGAAGCAGGGCGTTCTCATTCTTCAGCTCCTCGATCTaGCGGACACGACGGAGGTCAAGGGAGCTGAGGGCCAGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: SWARSRAFSFFSSSI*RTRRRSRELRASAL
Trigger: CAAGGCGCTGGCCCTCAGCTCCCTTGACCTCCGTCGTGTCCGCCAGATCGAGGAGCTGAAGAATGAGAACGCCCTGCTTCGAGCCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCC +
Preference number: 5 (lower is better)
Translates to: VRAGRRATDRRMGREDTVNWYWM*WSPNAA
Trigger: GGCGGCGTTCGGCGACCACAACATCCAGTACCAGTT...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTCACCTGTCCTCCATTaGTCTCTGTGCGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLSPVLH*SLCGTG
Trigger: ACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGCTCCGCTCCACTTCGTaGTGCTGGGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALLRSTS*CWALLL
Trigger: GAGGAGAAGAGCCCAGCACAACGAAGTGGAGCGGAG...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCTCCGCTCCACTTCGTaGTGCTGGGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFLRSTS*CWALLL
Trigger: GAGGAGAAGAGCCCAGCACAACGAAGTGGAGCGGAG...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGTGGACGATCCAGTTGTaGATCTTGTCCCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRWTIQL*ILSLRL
Trigger: GAGGCGGAGGGACAAGATCAACAACTGGATCGTCCA...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp TGCCGGGGCTTAGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGCTCCCGTCTTGCTGTaGTCTGCGTTACAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: CRGLVRAGRRATDRRMGRAPVLL*SALQSG
Trigger: TCCAGACTGTAACGCAGACAACAGCAAGACGGGAGC...CCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACTAAGCCCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTTACTCGCTCCCGTCTaGCTGTTGTCTGCGTTACAG +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLLLAPV*LLSALQ
Trigger: CTGTAACGCAGACAACAGCAAGACGGGAGCGAGTAA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCTCCTGCATGCGCTGGTaGGTCTGGCGCAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSSCMRW*VWRNSR
Trigger: CCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGGA...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTTCCTGCATGCGCTGGTaGGTCTGGCGCAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGSCMRW*VWRNSR
Trigger: CCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGGA...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTAGCCGCTCGGCCTCTTaGAAGGTCTCCTGCATGCGC +
Preference number: 5 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCSRSAS*KVSCMR
Trigger: GCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCT...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGAGCCGCTCGGCCTCTTaGAAGGTCTCCTGCATGCGC +
Preference number: 5 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGSRSAS*KVSCMR
Trigger: GCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCT...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTTGCCTCAGGAGCTCGTaGTCCATCTGCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCCLRSS*SICSRS
Trigger: CGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCA...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCTGTCCCCTCCCTCTaGCCTCCAGGTGAGACCACT +
Preference number: 5 (lower is better)
Translates to: VRAGRRATDRRMGREDTVSVPSL*PPGETT
Trigger: AGTGGTCTCACCTGGAGGCAAGAGGGAGGGGACAGA...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS GCA 90 bp AGCCGTAGTATCTCCCACACTGGACGCTGGGAAATAGGCAAATCGTaGCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATTGCT +
Preference number: 5 (lower is better)
Translates to: SRSISHTGRWEIGKS*LPADSLGRRTATIA
Trigger: AGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGAGATACTACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000594064.5
ENST00000595068.5
ENST00000596380.5
ENST00000599471.5
ENST00000607959.5
CDS GCA 90 bp GCTTGCTATGGAGCACGGTCCAGGCCCTGCACTGGGCTCAGCGAGTaGTTGCTCCCCTATTACTATCGCGGTGCGCTGAACCTTCCCACC +
Preference number: 5 (lower is better)
Translates to: ACYGARSRPCTGLSE*LLPYYYRGALNLPT
Trigger: GGTGGGAAGGTTCAGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 90 bp GCCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATGGCCACCGCT +
Preference number: 5 (lower is better)
Translates to: ACPPFVSVRNWYWML*SPNAACWTLVMATA
Trigger: AGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS CCA 90 bp CCGCCGCTCACCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: PPLTCPPFVSVRNWY*MLWSPNAACWTLVM
Trigger: CATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGAGCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593708.1
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGATTGCTGAAGGGATTTaGGATCACAGCCAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLIAEGI*DHSQRE
Trigger: TTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAAT...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCTCCGCTCCACTTCGTaGTGCTGGGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGLRSTS*CWALLL
Trigger: GAGGAGAAGAGCCCAGCACAACGAAGTGGAGCGGAG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGAGCCGCTCGGCCTCTTaGAAGGTCTCCTGCATGCGC +
Preference number: 5 (lower is better)
Translates to: RATDRRMGREDTVSKWRRSRSAS*KVSCMR
Trigger: GCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCT...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTTGCCTCAGGAGCTCGTaGTCCATCTGCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGCLRSS*SICSRS
Trigger: CGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCA...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTCGAGCCCCATGGCTGTaGGACTTTCTGCATGCAAGG +
Preference number: 5 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRRAPWL*DFLHAR
Trigger: CCTTGCATGCAGAAAGTCCAACAGCCATGGGGCTCG...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS CCA 90 bp ACCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATGGCCACCGCT +
Preference number: 5 (lower is better)
Translates to: TCPPFVSVRNWYWML*SPNAACWTLVMATA
Trigger: AGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222305.8
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS CCA 90 bp TGTGGTCTGTACGGACACAGCCGTAGTATCTCCCACACTGGACGCTaGGAAATAGGCAAATCGTGCCTCCCCGCTGACAGCCTCGGCCGC +
Preference number: 5 (lower is better)
Translates to: CGLYGHSRSISHTGR*EIGKSCLPADSLGR
Trigger: GCGGCCGAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGAGATACTACGGCTGTGTCCGTACAGACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000594064.5
ENST00000595068.5
ENST00000596380.5
ENST00000599471.5
ENST00000607959.5
CDS CCA 90 bp GTCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATGGCCACCGCT +
Preference number: 5 (lower is better)
Translates to: VCPPFVSVRNWYWML*SPNAACWTLVMATA
Trigger: AGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379134.7
CDS CCA 90 bp GCCCAAGATCAGTGCTTGCTATGGAGCACGGTCCAGGCCCTGCACTaGGCTCAGCGAGTGCTTGCTCCCCTATTACTATCGCGGTGCGCT +
Preference number: 5 (lower is better)
Translates to: AQDQCLLWSTVQALH*AQRVLAPLLLSRCA
Trigger: AGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGCACTGATCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 90 bp AGAGCACATGCCTTTCTCTGGCCACATCCCATCCTGACACCTGCCTaGGGACTGTGTGCTGCGGAGCCTGAGACCCCTGACTCAGGACCT +
Preference number: 5 (lower is better)
Translates to: RAHAFLWPHPILTPA*GLCAAEPETPDSGP
Trigger: AGGTCCTGAGTCAGGGGTCTCAGGCTCCGCAGCACACAGTCCCCAGGCAGGTGTCAGGATGGGATGTGGCCAGAGAAAGGCATGTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 90 bp TCAGCTGGGTGGCAGCTATCCCCAGACAGAGCACATGCCTTTCTCTaGCCACATCCCATCCTGACACCTGCCTGGGGACTGTGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: SAGWQLSPDRAHAFL*PHPILTPAWGLCAA
Trigger: CGCAGCACACAGTCCCCAGGCAGGTGTCAGGATGGGATGTGGCCAGAGAAAGGCATGTGCTCTGTCTGGGGATAGCTGCCACCCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS-3UTR CAA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCC +
Preference number: 5 (lower is better)
Translates to: RATDRRMGREDTVSKWRRNWYWM*WSPNAA
Trigger: GGCGGCGTTCGGCGACCACAACATCCAGTACCAGTT...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CAA 90 bp CGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCAGCGGGAAGGGCGCAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCC +
Preference number: 5 (lower is better)
Translates to: RTATIAEGILDHSQREGRNWYWM*WSPNAA
Trigger: GGCGGCGTTCGGCGACCACAACATCCAGTACCAGTT...GCGCCCTTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CAA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATC +
Preference number: 5 (lower is better)
Translates to: VRAGRRATDRRMGREDTVAGLPP*LKGFWI
Trigger: GATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGC...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATC +
Preference number: 5 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRAGLPP*LKGFWI
Trigger: GATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGC...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGCTCCGCTCCACTTCGTaGTGCTGGGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RATDRRMGREDTVSKWRRLRSTS*CWALLL
Trigger: GAGGAGAAGAGCCCAGCACAACGAAGTGGAGCGGAG...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCAGTTGTTGATCTaGTCCCTCCGCCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCIQLLI*SLRLRS
Trigger: GGAGCGGAGGCGGAGGGACAAGATCAACAACTGGAT...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCTGGACGATCCAGTTGTaGATCTTGTCCCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFWTIQL*ILSLRL
Trigger: GAGGCGGAGGGACAAGATCAACAACTGGATCGTCCA...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTGCTCCCGTCTTGCTGTaGTCTGCGTTACAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: VRAGRRATDRRMGREDTVAPVLL*SALQSG
Trigger: TCCAGACTGTAACGCAGACAACAGCAAGACGGGAGC...AACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGGCTCCCGTCTTGCTGTaGTCTGCGTTACAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALAPVLL*SALQSG
Trigger: TCCAGACTGTAACGCAGACAACAGCAAGACGGGAGC...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGACCCACCATCTCCAGGTaGTGCTGCTGCAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRPTISR*CCCSWA
Trigger: AGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGG...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGTCTGTCCCCTCCCTCTaGCCTCCAGGTGAGACCACT +
Preference number: 5 (lower is better)
Translates to: RATDRRMGREDTVSKWRRSVPSL*PPGETT
Trigger: AGTGGTCTCACCTGGAGGCAAGAGGGAGGGGACAGA...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCCAGGCCGCTCCCGTCTaGCTGTTGTCTGCGTTACAG +
Preference number: 5 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSQAAPV*LLSALQ
Trigger: CTGTAACGCAGACAACAGCAAGACGGGAGCGGCCTG...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595068.5
CDS CCA 90 bp CTGAACCTTCCCACCAAAGACAACCACACCCGCCTTTGGGAACTCTaGCCAAAAGCAGCAGCGGAGCTGAGAGTCCAGGCCTGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: LNLPTKDNHTRLWEL*PKAAAELRVQAWRH
Trigger: GTGCCTCCAGGCCTGGACTCTCAGCTCCGCTGCTGCTTTTGGCCAGAGTTCCCAAAGGCGGGTGTGGTTGTCTTTGGTGGGAAGGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS-3UTR CAA 90 bp ACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATC +
Preference number: 5 (lower is better)
Translates to: TDGQGGYRFQVEEGGGHCAGLPP*LKGFWI
Trigger: GATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGC...ACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp TGGCGGGCGTCACTGCCGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTGTGGTTCCATCAATTTTaGGAGAGTAAGGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: WRASLPGALAHHLQVVLLWFHQF*ESKGVS
Trigger: GGACACACCCTTACTCTCCAAAAATTGATGGAACCA...CAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGACGCCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS-3UTR CAA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTATCCAGTTGTTGATCTaGTCCCTCCGCCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGIQLLI*SLRLRS
Trigger: GGAGCGGAGGCGGAGGGACAAGATCAACAACTGGAT...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp CCTGTCCTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCATCCAGTTGTTGATCTaGTCCCTCCGCCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PVLVNAPEASAKLGHIRAIQLLI*SLRLRS
Trigger: GGAGCGGAGGCGGAGGGACAAGATCAACAACTGGAT...GGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CAA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGTGGACGATCCAGTTGTaGATCTTGTCCCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGWTIQL*ILSLRL
Trigger: GAGGCGGAGGGACAAGATCAACAACTGGATCGTCCA...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp CTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGTCGGTGGACGATCCAGTTGTaGATCTTGTCCCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: LVNAPEASAKLGHIRARRWTIQL*ILSLRL
Trigger: GAGGCGGAGGGACAAGATCAACAACTGGATCGTCCA...CCGACGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CAA 90 bp GAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCTTACTCGCTCCCGTCTaGCTGTTGTCTGCGTTACAG +
Preference number: 5 (lower is better)
Translates to: EGREKGDRQTDGQGGYRFLLAPV*LLSALQ
Trigger: CTGTAACGCAGACAACAGCAAGACGGGAGCGAGTAA...GAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000343550.9
CDS-3UTR CAA 90 bp GGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGAAATGCCTCAGGAGCTCGTaGTCCATCTGCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: GRIPFPSGGGRWALYPQKCLRSS*SICSRS
Trigger: CGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCA...TTTCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGATCTGTCCCCTCCCTCTaGCCTCCAGGTGAGACCACT +
Preference number: 5 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRSVPSL*PPGETT
Trigger: AGTGGTCTCACCTGGAGGCAAGAGGGAGGGGACAGA...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCCTCACCGCTCCCGTCTaGCTGTTGTCTGCGTTACAG +
Preference number: 5 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSLTAPV*LLSALQ
Trigger: CTGTAACGCAGACAACAGCAAGACGGGAGCGGTGAG...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599471.5
CDS GCA 90 bp TTCTTCAGCTCCTCGATCTGCTGCCTCAGGAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTGAAGGTCTCCTGCATGCGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: FFSSSICCLRSSLSI*SRSASLKVSCMRWL
Trigger: CAACCAGCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCAGCAGATCGAGGAGCTGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS GCA 90 bp CTGCACTGGGCTCAGCGAGTGCTTGCTCCCCTATTACTATCGCGGTaGGCTGAACCTTCCCACCAAAGACAACCACACCCGCCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: LHWAQRVLAPLLLSR*AEPSHQRQPHPPLG
Trigger: TCCCAAAGGCGGGTGTGGTTGTCTTTGGTGGGAAGGTTCAGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGCTGAGCCCAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 90 bp CGGTATGTCACCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: RYVTCPPFVSVRNWY*MLWSPNAACWTLVM
Trigger: CATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGACATACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222305.8
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS CCA 90 bp ACTACGCGGTATGTCACCTGTCCTCCATTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTG +
Preference number: 5 (lower is better)
Translates to: TTRYVTCPPFVSVRN*YWMLWSPNAACWTL
Trigger: CAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGACATACCGCGTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222305.8
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS CCA 90 bp TGCGCTGGTTGGTCTGGCGCAACTCCCGGATGTAATCGCAGGCCTTaGACAGGATCCCTCCTTTACTCGCTCCCGTCTTGCTGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: CAGWSGATPGCNRRP*TGSLLYSLPSCCCL
Trigger: CAGACAACAGCAAGACGGGAGCGAGTAAAGGAGGGATCCTGTCCAAGGCCTGCGATTACATCCGGGAGTTGCGCCAGACCAACCAGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS CCA 90 bp TGGATCACAGCCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: WITACPPFVSVRNWY*MLWSPNAACWTLVM
Trigger: CATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGCTGTGATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS CCA 90 bp GTCCTCTGTGTTCCTGTCTGTCCTCCATTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTG +
Preference number: 5 (lower is better)
Translates to: VLCVPVCPPFVSVRN*YWMLWSPNAACWTL
Trigger: CAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGACAGGAACACAGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379134.7
CDS-3UTR CAA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGATTGCTGAAGGGATTTaGGATCACAGCCAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALIAEGI*DHSQRE
Trigger: TTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAAT...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR CAA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATC +
Preference number: 5 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSAGLPP*LKGFWI
Trigger: GATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGC...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp CGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCAGCGGGAAGGGGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATC +
Preference number: 5 (lower is better)
Translates to: RRTATIAEGILDHSQREGAGLPP*LKGFWI
Trigger: GATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGC...CCCTTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CAA 90 bp TGTCCTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCCGGCTCCCGTCTTGCTGTaGTCTGCGTTACAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: CPRQCPRSFRQARTHSGPAPVLL*SALQSG
Trigger: TCCAGACTGTAACGCAGACAACAGCAAGACGGGAGC...CGGGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CAA 90 bp ATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCCAGCCTGTCCTCCATTaGTCTCTGTGCGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: MGREDTVSKWRRAVGTVSQPVLH*SLCGTG
Trigger: ACCAGTTCCGCACAGAGACAAATGGAGGACAGGCTG...GGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS TCA 90 bp CTGGGCTCAGCGAGTGCTTGCTCCCCTATTACTATCGCGGTGCGCTaGACCTTCCCACCAAAGACAACCACACCCGCCTTTGGGAACTCT +
Preference number: 5 (lower is better)
Translates to: LGSASACSPITIAVR*TFPPKTTTPAFGNS
Trigger: AGAGTTCCCAAAGGCGGGTGTGGTTGTCTTTGGTGGGAAGGTTCAGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGCTGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 90 bp GGATTTTGGATCACAGCCTGTCCTCCATTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTG +
Preference number: 5 (lower is better)
Translates to: GFWITACPPFVSVRN*YWMLWSPNAACWTL
Trigger: CAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGCTGTGATCCAAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS CCA 90 bp TGTGTTCCTGTCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: CVPVCPPFVSVRNWY*MLWSPNAACWTLVM
Trigger: CATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGACAGGAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379134.7
CDS CCA 90 bp GCCGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCTaGGGAGTAGGAGGGCAGAGGCTACCCTTAGCTTTCTCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: AAGLPPLLKGFWITA*GVGGQRLPLAFSVP
Trigger: AGGAACAGAGAAAGCTAAGGGTAGCCTCTGCCCTCCTACTCCCCAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596380.5
ENST00000607959.5
CDS CCA 90 bp CAGGGCAATGGCAGATCCCAACTGGTACTTGCAGCTCCCAGGGCCTaGCCCACAAAGCACCAGCTCACCCAGGAAAGACCCAAATCCTAT +
Preference number: 5 (lower is better)
Translates to: QGNGRSQLVLAAPRA*PTKHQLTQERPKSY
Trigger: ATAGGATTTGGGTCTTTCCTGGGTGAGCTGGTGCTTTGTGGGCCAGGCCCTGGGAGCTGCAAGTACCAGTTGGGATCTGCCATTGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 90 bp CACCCCTGCTTAAAATCCTTCCACAGGGCAATGGCAGATCCCAACTaGTACTTGCAGCTCCCAGGGCCTGGCCCACAAAGCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: HPCLKSFHRAMADPN*YLQLPGPGPQSTSS
Trigger: TGAGCTGGTGCTTTGTGGGCCAGGCCCTGGGAGCTGCAAGTACCAGTTGGGATCTGCCATTGCCCTGTGGAAGGATTTTAAGCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS-3UTR CAA 90 bp CGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTTTTTCCGCCTCGGGTCCCTaGTCGTGGCTGGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RGPHGASLLQLNTSLSIFSASGP*SWLAAA
Trigger: TGCCGCCGCCAGCCACGACAAGGGACCCGAGGCGGA...AAAAATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CAA 90 bp AGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGTCACCTGTCCTCCATTaGTCTCTGTGCGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: RATDRRMGREDTVSKWRRSPVLH*SLCGTG
Trigger: ACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGA...CCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR CAA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGATTGCTGAAGGGATTTaGGATCACAGCCAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGIAEGI*DHSQRE
Trigger: TTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAAT...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222305.8
ENST00000595068.5
CDS-3UTR CAA 90 bp CTCGGCCGCCGGACTGCCACCATTGCTGAAGGGATTTTGGATCACAGCCAGCGGATTGCTGAAGGGATTTaGGATCACAGCCAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: LGRRTATIAEGILDHSQRIAEGI*DHSQRE
Trigger: TTCCCGCTGGCTGTGATCCAAAATCCCTTCAGCAAT...CCGCTGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602164.5
CDS-3UTR CAA 90 bp CAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTATCCACAGATGGACGATCCAGTTGTaGATCTTGTCCCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: QGGYRFQVEEGGGHCIHRWTIQL*ILSLRL
Trigger: GAGGCGGAGGGACAAGATCAACAACTGGATCGTCCA...TCTGTGGATACAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS GCA 90 bp TCCTTGTGCTCCCTCTTTCCTCCAAAACCAATAGCCCAAGATCAGTaGTTGCTATGGAGCACGGTCCAGGCCCTGCACTGGGCTCAGCGA +
Preference number: 5 (lower is better)
Translates to: SLCSLFPPKPIAQDQ*LLWSTVQALHWAQR
Trigger: TCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGCACTGATCTTGGGCTATTGGTTTTGGAGGAAAGAGGGAGCACAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 90 bp TCCCTCTTTCCTCCAAAACCAATAGCCCAAGATCAGTGCTTGCTATaGAGCACGGTCCAGGCCCTGCACTGGGCTCAGCGAGTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: SLFPPKPIAQDQCLL*STVQALHWAQRVLA
Trigger: AGCAAGCACTCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGCACTGATCTTGGGCTATTGGTTTTGGAGGAAAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS-3UTR CAA 90 bp AGTGAGGGCCGGGAGAAGGGCGACAGACAGACGGATGGGCAGGGAGGATACCGTTGGTTCCATCAATTTTaGGAGAGTAAGGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SEGREKGDRQTDGQGGYRWFHQF*ESKGVS
Trigger: GGACACACCCTTACTCTCCAAAAATTGATGGAACCA...ACGGTATCCTCCCTGCCCATCCGTCTGTCTGTCGCCCTTCTCCCGGCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGTGGTTCCATCAATTTTaGGAGAGTAAGGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALWFHQF*ESKGVS
Trigger: GGACACACCCTTACTCTCCAAAAATTGATGGAACCA...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp GACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCACTGCATGGGGCCAGTTTATaGCAGTTAAATACCTCTCTC +
Preference number: 5 (lower is better)
Translates to: DGWAGRIPFPSGGGRWALHGASL*QLNTSL
Trigger: GAGAGAGGTATTTAACTGCAATAAACTGGCCCCATG...CAGTGCCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS-3UTR CAA 90 bp CCTGTCCTCGTCAATGCCCCAGAAGCTTCCGCCAAGCTAGGACACATTCGGGCCTTTCAAGGAACTTCGTaGTGCTGGGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PVLVNAPEASAKLGHIRAFQGTS*CWALLL
Trigger: GAGGAGAAGAGCCCAGCACAACGAAGTTCCTTGAAA...GGCCCGAATGTGTCCTAGCTTGGCGGAAGCTTCTGGGGCATTGACGAGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CAA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGTGGTTCCATCAATTTTaGGAGAGTAAGGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGWFHQF*ESKGVS
Trigger: GGACACACCCTTACTCTCCAAAAATTGATGGAACCA...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS-3UTR CAA 90 bp ACAAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTTCTGTCCCCTCCCTCTaGCCTCCAGGTGAGACCACT +
Preference number: 5 (lower is better)
Translates to: TRRGPHGASLLQLNTSLSSVPSL*PPGETT
Trigger: AGTGGTCTCACCTGGAGGCAAGAGGGAGGGGACAGA...AGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS-3UTR CAA 90 bp AGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTGGGCATGGGGCCAGTTTATaGCAGTTAAATACCTCTCTC +
Preference number: 5 (lower is better)
Translates to: RQTDGQGGYRFQVEEGGGHGASL*QLNTSL
Trigger: GAGAGAGGTATTTAACTGCAATAAACTGGCCCCATG...CCCACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
CDS GCA 90 bp CGGGCCCGTCGGGTAAGTCTCATCGAATTTCAAGGAACTTCGTTGTaGTGGGCTCTTCTCCTCTCATCTCGGGGTGTTCTGGTTCCATCA +
Preference number: 5 (lower is better)
Translates to: RARRVSLIEFQGTSL*WALLLSSRGVLVPS
Trigger: TGATGGAACCAGAACACCCCGAGATGAGAGGAGAAGAGCCCAGCACAACGAAGTTCCTTGAAATTCGATGAGACTTACCCGACGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CAA 90 bp GACAGACAGACGGATGGGCAGGGAGGATACCGTTTCCAAGTGGAGGAGGGCGGTTGGTTCCATCAATTTTaGGAGAGTAAGGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: DRQTDGQGGYRFQVEEGGWFHQF*ESKGVS
Trigger: GGACACACCCTTACTCTCCAAAAATTGATGGAACCA...ACCGCCCTCCTCCACTTGGAAACGGTATCCTCCCTGCCCATCCGTCTGTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000595068.5
ENST00000599471.5
CDS CCA 90 bp TCTGCGTGTAGCATTCTGTCCTGTGTTTCAAACAGCCCTGGAACATaGCGGGAGGTCAGCGATCACTTGCTGAGCAAATCCGTTTCGCAC +
Preference number: 5 (lower is better)
Translates to: SACSILSCVSNSPGT*REVSDHLLSKSVSH
Trigger: GTGCGAAACGGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGCTGTTTGAAACACAGGACAGAATGCTACACGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607959.5
CDS-3UTR CAA 90 bp ACAAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTTTACTCGCTCCCGTCTaGCTGTTGTCTGCGTTACAG +
Preference number: 5 (lower is better)
Translates to: TRRGPHGASLLQLNTSLSLLAPV*LLSALQ
Trigger: CTGTAACGCAGACAACAGCAAGACGGGAGCGAGTAA...AGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS GCA 90 bp GAGGCTACCCTTAGCTTTCTCTGTTCCTCCATCCCGTCCCCTCATTaGTGTGCTTGGGGTTTACTGCATTCTCTGCAATTAACAGGAGTG +
Preference number: 5 (lower is better)
Translates to: EATLSFLCSSIPSPH*CAWGLLHSLQLTGV
Trigger: CACTCCTGTTAATTGCAGAGAATGCAGTAAACCCCAAGCACAGCAATGAGGGGACGGGATGGAGGAACAGAGAAAGCTAAGGGTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596380.5
ENST00000607959.5
CDS CCA 90 bp CTTAGCTTTCTCTGTTCCTCCATCCCGTCCCCTCATTGCTGTGCTTaGGGTTTACTGCATTCTCTGCAATTAACAGGAGTGGGGACTCCT +
Preference number: 5 (lower is better)
Translates to: LSFLCSSIPSPHCCA*GLLHSLQLTGVGTP
Trigger: AGGAGTCCCCACTCCTGTTAATTGCAGAGAATGCAGTAAACCCCAAGCACAGCAATGAGGGGACGGGATGGAGGAACAGAGAAAGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596380.5
ENST00000607959.5
CDS CCA 90 bp GCCCGTCGGGTAAGTCTCATCGAATTTCAAGGAACTTCGTTGTGCTaGGCTCTTCTCCTCTCATCTCGGGGTGTTCTGGTTCCATCAATT +
Preference number: 5 (lower is better)
Translates to: ARRVSLIEFQGTSLC*ALLLSSRGVLVPSI
Trigger: AATTGATGGAACCAGAACACCCCGAGATGAGAGGAGAAGAGCCCAGCACAACGAAGTTCCTTGAAATTCGATGAGACTTACCCGACGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS-3UTR CAA 90 bp AAGGCGGGGGCCACATGGGGCCAGTTTATTGCAGTTAAATACCTCTCTCTCTATTCACCTGTCCTCCATTaGTCTCTGTGCGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: KAGATWGQFIAVKYLSLYSPVLH*SLCGTG
Trigger: ACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGA...ATAGAGAGAGAGGTATTTAACTGCAATAAACTGGCCCCATGTGGCCCCCGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222305.8
CDS TCA 90 bp TTTCAAACAGCCCTGGAACATGGCGGGAGGTCAGCGATCACTTGCTaGGCAAATCCGTTTCGCACTCTAAGAAACTTTCCTCTTAAGACA +
Preference number: 5 (lower is better)
Translates to: FQTALEHGGRSAITC*ANPFRTLRNFPLKT
Trigger: TGTCTTAAGAGGAAAGTTTCTTAGAGTGCGAAACGGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGCTGTTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607959.5
CDS-3UTR CAA 90 bp CGTCTTGCTGTTGTCTGCGTTACAGTCTGGAATGATTTTCGAAAGCTGGACGATTGGTTCCATCAATTTTaGGAGAGTAAGGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: RLAVVCVTVWNDFRKLDDWFHQF*ESKGVS
Trigger: GGACACACCCTTACTCTCCAAAAATTGATGGAACCA...ATCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS CCA 72 bp GCAGCGGAGCTGAGAGTCCAGGCCTGGAGGCACCGCTaGCGCAGTCCCCAGCAGAGCGCTCCTCGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: AAELRVQAWRHR*RSPQQSAPRPG
Trigger: CCCTGGGCGAGGAGCGCTCTGCTGGGGACTGCGCCAGCGGTGCCTCCAGGCCTGGACTCTCAGCTCCGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 90 bp ATCTGGCGGACACGACGGAGGTCAAGGGAGCTGAGGGCCAGCGCCTaGCATCTGGGGCTCCTGGGCCCTGACCCGCTCCAGGCCCCGCAC +
Preference number: 6 (lower is better)
Translates to: IWRTRRRSRELRASA*HLGLLGPDPLQAPH
Trigger: GTGCGGGGCCTGGAGCGGGTCAGGGCCCAGGAGCCCCAGATGCAAGGCGCTGGCCCTCAGCTCCCTTGACCTCCGTCGTGTCCGCCAGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS GCA 72 bp GTGGAGGAACTCGGCAGGCGGCCTCGTTTCAGCCTCTaGCCTCCCACAGTCCTCTCGAGAGCTGGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: VEELGRRPRFSL*PPTVLSRAGRR
Trigger: CCGGCGCCCAGCTCTCGAGAGGACTGTGGGAGGGCAGAGGCTGAAACGAGGCCGCCTGCCGAGTTCCTCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS TCA 72 bp AGGGCAGGCACCGCCCACCGGCCTCCACCCCAGGGATaGCTCCCGAGCCCCATGGCTGTTGGACTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: RAGTAHRPPPQG*LPSPMAVGLSA
Trigger: TGCAGAAAGTCCAACAGCCATGGGGCTCGGGAGTCATCCCTGGGGTGGAGGCCGGTGGGCGGTGCCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000599471.5
CDS GCA 72 bp GGGGCCGGGACCACCGCAGACACTGAGGGTCCGGGGTaGTCACCGCTCCCGTCTTGCTGTTGTCTGCGTTAC +
Preference number: 6 (lower is better)
Translates to: GAGTTADTEGPG*SPLPSCCCLRY
Trigger: GTAACGCAGACAACAGCAAGACGGGAGCGGTGAGCACCCCGGACCCTCAGTGTCTGCGGTGGTCCCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000599471.5
CDS CCA 72 bp CAGTCCCCAGCAGAGCGCTCCTCGCCCAGGGGTCTGTaGAGGAACTCGGCAGGCGGCCTCGTTTCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: QSPAERSSPRGL*RNSAGGLVSAS
Trigger: AGAGGCTGAAACGAGGCCGCCTGCCGAGTTCCTCCACAGACCCCTGGGCGAGGAGCGCTCTGCTGGGGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 72 bp TGGCCAAAAGCAGCAGCGGAGCTGAGAGTCCAGGCCTaGAGGCACCGCTGGCGCAGTCCCCAGCAGAGCGCT +
Preference number: 6 (lower is better)
Translates to: WPKAAAELRVQA*RHRWRSPQQSA
Trigger: AGCGCTCTGCTGGGGACTGCGCCAGCGGTGCCTCCAGGCCTGGACTCTCAGCTCCGCTGCTGCTTTTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 90 bp GCCCGCCCGTTCGCCCTCGCGGCCCGCCGCTCACCTGTCCTCCATTaGTCTCTGTGCGGAACTGGTACTGGATGTTGTGGTCGCCGAACG +
Preference number: 6 (lower is better)
Translates to: ARPFALAARRSPVLH*SLCGTGTGCCGRRT
Trigger: CGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGAGCGGCGGGCCGCGAGGGCGAACGGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593708.1
CDS GCA 72 bp GGGATGACTCCCGAGCCCCATGGCTGTTGGACTTTCTaGATGCAAGGGTCGGGGGCCGGGACCACCGCAGAC +
Preference number: 6 (lower is better)
Translates to: GMTPEPHGCWTF*MQGSGAGTTAD
Trigger: GTCTGCGGTGGTCCCGGCCCCCGACCCTTGCATGCAGAAAGTCCAACAGCCATGGGGCTCGGGAGTCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000599471.5
CDS TCA 72 bp CTGACGGCGCCAGCTGTGTCGCCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACTACGCGGTATGTCACC +
Preference number: 6 (lower is better)
Translates to: LTAPAVSPWPSS*PSVTWTTRYVT
Trigger: GGTGACATACCGCGTAGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGGCGACACAGCTGGCGCCGTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222305.8
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS TCA 72 bp TCACGGTGCACAACAGGGATCTGGCCCCATGCAGCCTaGGGCCTGAAGGCAGCATCCGCTGGGCGACACCTG +
Preference number: 6 (lower is better)
Translates to: SRCTTGIWPHAA*GLKAASAGRHL
Trigger: CAGGTGTCGCCCAGCGGATGCTGCCTTCAGGCCTCAGGCTGCATGGGGCCAGATCCCTGTTGTGCACCGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607959.5
CDS TCA 72 bp AGAGTCACAGCCACGGCTTCGCTGACGGATCATGCCTaGGCGGCCGTCCTCACAGGGCAGAGGCTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: RVTATASLTDHA*AAVLTGQRLSP
Trigger: TGGGCTGAGCCTCTGCCCTGTGAGGACGGCCGCTCAGGCATGATCCGTCAGCGAAGCCGTGGCTGTGACTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000600898.1
CDS GCA 72 bp ATCTCCCACACTGGACGCTGGGAAATAGGCAAATCGTaGCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCC +
Preference number: 6 (lower is better)
Translates to: ISHTGRWEIGKS*LPADSLGRRTA
Trigger: GGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000594064.5
ENST00000595068.5
ENST00000596380.5
ENST00000599471.5
ENST00000607959.5
CDS CCA 72 bp TGGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGCTaGACGCTGGTGATGGCCACCGCTGTCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: WYWMLWSPNAAC*TLVMATAVCSS
Trigger: GGAGGAGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
CDS TCA 72 bp CCACTGCGGAAAACAGAGTCACAGCCACGGCTTCGCTaGCGGATCATGCCTGAGCGGCCGTCCTCACAGGGC +
Preference number: 6 (lower is better)
Translates to: PLRKTESQPRLR*RIMPERPSSQG
Trigger: GCCCTGTGAGGACGGCCGCTCAGGCATGATCCGTCAGCGAAGCCGTGGCTGTGACTCTGTTTTCCGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000600898.1
CDS GCA 72 bp AACTGGTACTGGATGTTGTGGTCGCCGAACGCCGCCTaGTGGACGCTGGTGATGGCCACCGCTGTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: NWYWMLWSPNAA*WTLVMATAVCS
Trigger: GGAGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS GCA 72 bp CGGGTGCCCTCGCCCACCATCTCCAGGTTGTGCTGCTaGAGCTGGGCTCGAAGCAGGGCGTTCTCATTCTTC +
Preference number: 6 (lower is better)
Translates to: RVPSPTISRLCC*SWARSRAFSFF
Trigger: GAAGAATGAGAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS GCA 72 bp GGAGCACGGTCCAGGCCCTGCACTGGGCTCAGCGAGTaGTTGCTCCCCTATTACTATCGCGGTGCGCTGAAC +
Preference number: 6 (lower is better)
Translates to: GARSRPCTGLSE*LLPYYYRGALN
Trigger: GTTCAGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS TCA 72 bp GGAGCTCGTTGTCCATCTGCAGCCGCTCGGCCTCTTTaGAGGTCTCCTGCATGCGCTGGTTGGTCTGGCGCA +
Preference number: 6 (lower is better)
Translates to: GARCPSAAARPL*RSPACAGWSGA
Trigger: TGCGCCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS GCA 72 bp TCCATCTGCAGCCGCTCGGCCTCTTTGAAGGTCTCCTaGATGCGCTGGTTGGTCTGGCGCAACTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: SICSRSASLKVS*MRWLVWRNSRM
Trigger: CATCCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS GCA 72 bp GCGGCCCGCCGCTCACCTGTCCTCCATTTGTCTCTGTaGGGAACTGGTACTGGATGTTGTGGTCGCCGAACG +
Preference number: 6 (lower is better)
Translates to: AARRSPVLHLSL*GTGTGCCGRRT
Trigger: CGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGAGCGGCGGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593708.1
CDS GCA 72 bp GCACCCACCTGCTGCCTCAGGAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTGAAGGTCTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: APTCCLRSSLSI*SRSASLKVSCM
Trigger: CATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCAGCAGGTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS GCA 72 bp AAACAGAGTCACAGCCACGGCTTCGCTGACGGATCATaGCTGAGCGGCCGTCCTCACAGGGCAGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: KQSHSHGFADGS*LSGRPHRAEAQ
Trigger: CTGAGCCTCTGCCCTGTGAGGACGGCCGCTCAGGCATGATCCGTCAGCGAAGCCGTGGCTGTGACTCTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000600898.1
CDS CCA 72 bp CGAAGCAGGGCGTTCTCATTCTTCAGCTCCTCGATCTaGCGGACACGACGGAGGTCAAGGGAGCTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: RSRAFSFFSSSI*RTRRRSRELRA
Trigger: GGCCCTCAGCTCCCTTGACCTCCGTCGTGTCCGCCAGATCGAGGAGCTGAAGAATGAGAACGCCCTGCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594064.5
CDS CCA 72 bp GGCAGATCCCAACTGGTACTTGCAGCTCCCAGGGCCTaGCCCACAAAGCACCAGCTCACCCAGGAAAGACCC +
Preference number: 6 (lower is better)
Translates to: GRSQLVLAAPRA*PTKHQLTQERP
Trigger: GGGTCTTTCCTGGGTGAGCTGGTGCTTTGTGGGCCAGGCCCTGGGAGCTGCAAGTACCAGTTGGGATCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 72 bp AGGAGCTCGTTGTCCATCTGCAGCCGCTCGGCCTCTTaGAAGGTCTCCTGCATGCGCTGGTTGGTCTGGCGC +
Preference number: 6 (lower is better)
Translates to: RSSLSICSRSAS*KVSCMRWLVWR
Trigger: GCGCCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS CAA 72 bp TCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATCACAGCCTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SPLTASAAGLPP*LKGFWITACPP
Trigger: TGGAGGACAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS CAA 72 bp GCACGGTCCAGGCCCTGCACTGGGCTCAGCGAGTGCTaGCTCCCCTATTACTATCGCGGTGCGCTGAACCTT +
Preference number: 6 (lower is better)
Translates to: ARSRPCTGLSEC*LPYYYRGALNL
Trigger: AAGGTTCAGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGCTGAGCCCAGTGCAGGGCCTGGACCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 90 bp GTCACCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATGGCCACC +
Preference number: 6 (lower is better)
Translates to: VTCPPFVSVRNWYWM*WSPNAACWTLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222305.8
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS CAA 90 bp ACAGCCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATGGCCACC +
Preference number: 6 (lower is better)
Translates to: TACPPFVSVRNWYWM*WSPNAACWTLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS CAA 90 bp CCTGTCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATGGCCACC +
Preference number: 6 (lower is better)
Translates to: PVCPPFVSVRNWYWM*WSPNAACWTLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379134.7
CDS CAA 90 bp CTCACCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATGGCCACC +
Preference number: 6 (lower is better)
Translates to: LTCPPFVSVRNWYWM*WSPNAACWTLVMAT
Trigger: GGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593708.1
CDS GCA 72 bp CCTTCCACAGGGCAATGGCAGATCCCAACTGGTACTTaGAGCTCCCAGGGCCTGGCCCACAAAGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: PSTGQWQIPTGT*SSQGLAHKAPA
Trigger: AGCTGGTGCTTTGTGGGCCAGGCCCTGGGAGCTGCAAGTACCAGTTGGGATCTGCCATTGCCCTGTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 72 bp GCCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACG +
Preference number: 6 (lower is better)
Translates to: ACPPFVSVRNWY*MLWSPNAACWT
Trigger: CGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS CCA 72 bp CCGCTCACCTGTCCTCCATTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: PLTCPPFVSVRN*YWMLWSPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593708.1
CDS CAA 72 bp CCTCCATTTGTCTCTGTGCGGAACTGGTACTGGATGTaGTGGTCGCCGAACGCCGCCTGCTGGACGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PPFVSVRNWYWM*WSPNAACWTLV
Trigger: CACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS CAA 90 bp TGCTATGGAGCACGGTCCAGGCCCTGCACTGGGCTCAGCGAGTGCTaGCTCCCCTATTACTATCGCGGTGCGCTGAACCTTCCCACCAAA +
Preference number: 6 (lower is better)
Translates to: CYGARSRPCTGLSEC*LPYYYRGALNLPTK
Trigger: TTTGGTGGGAAGGTTCAGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS GCA 72 bp TCCTCGATCTGCTGCCTCAGGAGCTCGTTGTCCATCTaGAGCCGCTCGGCCTCTTTGAAGGTCTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: SSICCLRSSLSI*SRSASLKVSCM
Trigger: CATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCAGCAGATCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS CCA 72 bp CCATTTGTCTCTGTGCGGAACTGGTACTGGATGTTGTaGTCGCCGAACGCCGCCTGCTGGACGCTGGTGATG +
Preference number: 6 (lower is better)
Translates to: PFVSVRNWYWML*SPNAACWTLVM
Trigger: CATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS CCA 72 bp ACCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACG +
Preference number: 6 (lower is better)
Translates to: TCPPFVSVRNWY*MLWSPNAACWT
Trigger: CGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222305.8
ENST00000593708.1
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS CCA 72 bp TGGTCTGGCGCAACTCCCGGATGTAATCGCAGGCCTTaGACAGGATCCCTCCTTTACTCGCTCCCGTCTTGC +
Preference number: 6 (lower is better)
Translates to: WSGATPGCNRRP*TGSLLYSLPSC
Trigger: GCAAGACGGGAGCGAGTAAAGGAGGGATCCTGTCCAAGGCCTGCGATTACATCCGGGAGTTGCGCCAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS CCA 72 bp GTCTGTCCTCCATTTGTCTCTGTGCGGAACTGGTACTaGATGTTGTGGTCGCCGAACGCCGCCTGCTGGACG +
Preference number: 6 (lower is better)
Translates to: VCPPFVSVRNWY*MLWSPNAACWT
Trigger: CGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379134.7
CDS CCA 72 bp CAGTGCTTGCTATGGAGCACGGTCCAGGCCCTGCACTaGGCTCAGCGAGTGCTTGCTCCCCTATTACTATCG +
Preference number: 6 (lower is better)
Translates to: QCLLWSTVQALH*AQRVLAPLLLS
Trigger: CGATAGTAATAGGGGAGCAAGCACTCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 90 bp AATCGTGCCTCCCCGCTGACAGCCTCGGCCGCCGGACTGCCACCATaGCTGAAGGGATTTTGGATCACAGCCTGTCCTCCATTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: NRASPLTASAAGLPP*LKGFWITACPPFVS
Trigger: AGAGACAAATGGAGGACAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS GCA 72 bp GCTCAGCGAGTGCTTGCTCCCCTATTACTATCGCGGTaGGCTGAACCTTCCCACCAAAGACAACCACACCCG +
Preference number: 6 (lower is better)
Translates to: AQRVLAPLLLSR*AEPSHQRQPHP
Trigger: CGGGTGTGGTTGTCTTTGGTGGGAAGGTTCAGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 72 bp TACGGACACAGCCGTAGTATCTCCCACACTGGACGCTaGGAAATAGGCAAATCGTGCCTCCCCGCTGACAGC +
Preference number: 6 (lower is better)
Translates to: YGHSRSISHTGR*EIGKSCLPADS
Trigger: GCTGTCAGCGGGGAGGCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGAGATACTACGGCTGTGTCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000594064.5
ENST00000595068.5
ENST00000596380.5
ENST00000597671.5
ENST00000599471.5
ENST00000607959.5
CDS CCA 72 bp ATCACAGCCTGTCCTCCATTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: ITACPPFVSVRN*YWMLWSPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGCTGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS CCA 72 bp GTTCCTGTCTGTCCTCCATTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: VPVCPPFVSVRN*YWMLWSPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGACAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379134.7
CDS CCA 72 bp CCTCCAAAACCAATAGCCCAAGATCAGTGCTTGCTATaGAGCACGGTCCAGGCCCTGCACTGGGCTCAGCGA +
Preference number: 6 (lower is better)
Translates to: PPKPIAQDQCLL*STVQALHWAQR
Trigger: TCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGCACTGATCTTGGGCTATTGGTTTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 72 bp TTCTTCAGCTCCTCGATCTGCTGCCTCAGGAGCTCGTaGTCCATCTGCAGCCGCTCGGCCTCTTTGAAGGTC +
Preference number: 6 (lower is better)
Translates to: FFSSSICCLRSS*SICSRSASLKV
Trigger: GACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCAGCAGATCGAGGAGCTGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594264.1
ENST00000595068.5
ENST00000599471.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS CAA 90 bp TTGTGCTCCCTCTTTCCTCCAAAACCAATAGCCCAAGATCAGTGCTaGCTATGGAGCACGGTCCAGGCCCTGCACTGGGCTCAGCGAGTG +
Preference number: 6 (lower is better)
Translates to: LCSLFPPKPIAQDQC*LWSTVQALHWAQRV
Trigger: CACTCGCTGAGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGCACTGATCTTGGGCTATTGGTTTTGGAGGAAAGAGGGAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS TCA 72 bp GCGAGTGCTTGCTCCCCTATTACTATCGCGGTGCGCTaGACCTTCCCACCAAAGACAACCACACCCGCCTTT +
Preference number: 6 (lower is better)
Translates to: ASACSPITIAVR*TFPPKTTTPAF
Trigger: AAAGGCGGGTGTGGTTGTCTTTGGTGGGAAGGTTCAGCGCACCGCGATAGTAATAGGGGAGCAAGCACTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CCA 72 bp TATGTCACCTGTCCTCCATTTGTCTCTGTGCGGAACTaGTACTGGATGTTGTGGTCGCCGAACGCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: YVTCPPFVSVRN*YWMLWSPNAAC
Trigger: GCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222305.8
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS GCA 72 bp CTACGCGGTATGTCACCTGTCCTCCATTTGTCTCTGTaGGGAACTGGTACTGGATGTTGTGGTCGCCGAACG +
Preference number: 6 (lower is better)
Translates to: LRGMSPVLHLSL*GTGTGCCGRRT
Trigger: CGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGTGACATACCGCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222305.8
ENST00000594064.5
ENST00000595068.5
ENST00000598058.1
ENST00000602164.5
ENST00000607959.5
CDS GCA 72 bp GTCCGGGGTGCTCACCGCTCCCGTCTTGCTGTTGTCTaGGTTACAGTCTGGAATGATTTTCGAAAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: VRGAHRSRLAVV*VTVWNDFRKLD
Trigger: GTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCGGTGAGCACCCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000599471.5
CDS GCA 72 bp TCCCTCTTTCCTCCAAAACCAATAGCCCAAGATCAGTaGTTGCTATGGAGCACGGTCCAGGCCCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: SLFPPKPIAQDQ*LLWSTVQALHW
Trigger: CCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGCACTGATCTTGGGCTATTGGTTTTGGAGGAAAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 72 bp CTCTTTCCTCCAAAACCAATAGCCCAAGATCAGTGCTaGCTATGGAGCACGGTCCAGGCCCTGCACTGGGCT +
Preference number: 6 (lower is better)
Translates to: LFPPKPIAQDQC*LWSTVQALHWA
Trigger: AGCCCAGTGCAGGGCCTGGACCGTGCTCCATAGCAAGCACTGATCTTGGGCTATTGGTTTTGGAGGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 90 bp ATTCGGGCCCGTCGGGTAAGTCTCATCGAATTTCAAGGAACTTCGTaGTGCTGGGCTCTTCTCCTCTCATCTCGGGGTGTTCTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: IRARRVSLIEFQGTS*CWALLLSSRGVLVP
Trigger: TGGAACCAGAACACCCCGAGATGAGAGGAGAAGAGCCCAGCACAACGAAGTTCCTTGAAATTCGATGAGACTTACCCGACGGGCCCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS TCA 72 bp GCCCTGGAACATGGCGGGAGGTCAGCGATCACTTGCTaGGCAAATCCGTTTCGCACTCTAAGAAACTTTCCT +
Preference number: 6 (lower is better)
Translates to: ALEHGGRSAITC*ANPFRTLRNFP
Trigger: AGGAAAGTTTCTTAGAGTGCGAAACGGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607959.5
CDS GCA 72 bp GATTTTGGATCACAGCCTGTCCTCCATTTGTCTCTGTaGGGAACTGGTACTGGATGTTGTGGTCGCCGAACG +
Preference number: 6 (lower is better)
Translates to: DFGSQPVLHLSL*GTGTGCCGRRT
Trigger: CGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGCTGTGATCCAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343550.9
CDS CCA 72 bp AGCATTCTGTCCTGTGTTTCAAACAGCCCTGGAACATaGCGGGAGGTCAGCGATCACTTGCTGAGCAAATCC +
Preference number: 6 (lower is better)
Translates to: SILSCVSNSPGT*REVSDHLLSKS
Trigger: GGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGCTGTTTGAAACACAGGACAGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607959.5
CDS GCA 72 bp CGGGTAAGTCTCATCGAATTTCAAGGAACTTCGTTGTaGTGGGCTCTTCTCCTCTCATCTCGGGGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: RVSLIEFQGTSL*WALLLSSRGVL
Trigger: CAGAACACCCCGAGATGAGAGGAGAAGAGCCCAGCACAACGAAGTTCCTTGAAATTCGATGAGACTTACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS GCA 72 bp GATGTAATCGCAGGCCGCTCCCGTCTTGCTGTTGTCTaGGTTACAGTCTGGAATGATTTTCGAAAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: DVIAGRSRLAVV*VTVWNDFRKLD
Trigger: GTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCGGCCTGCGATTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595068.5
CDS CCA 72 bp TGTGCTGGGCTCTTCTCCTCTCATCTCGGGGTGTTCTaGTTCCATCAATTTTTGGAGAGTAAGGGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: CAGLFSSHLGVF*FHQFLESKGVS
Trigger: GGACACACCCTTACTCTCCAAAAATTGATGGAACCAGAACACCCCGAGATGAGAGGAGAAGAGCCCAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000595068.5
ENST00000596380.5
ENST00000597671.5
ENST00000599471.5
ENST00000607959.5
CDS CCA 72 bp CATAAAACTCCACAATCTCATGCCAACTGTGTCAGCTaGGTGGCAGCTATCCCCAGACAGAGCACATGCCTT +
Preference number: 6 (lower is better)
Translates to: HKTPQSHANCVS*VAAIPRQSTCL
Trigger: AAGGCATGTGCTCTGTCTGGGGATAGCTGCCACCCAGCTGACACAGTTGGCATGAGATTGTGGAGTTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594264.1
CDS CAA 72 bp AACAGCCCTGGAACATGGCGGGAGGTCAGCGATCACTaGCTGAGCAAATCCGTTTCGCACTCTAAGAAACTT +
Preference number: 6 (lower is better)
Translates to: NSPGTWREVSDH*LSKSVSHSKKL
Trigger: AAGTTTCTTAGAGTGCGAAACGGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607959.5
CDS CAA 72 bp CGTCGGGTAAGTCTCATCGAATTTCAAGGAACTTCGTaGTGCTGGGCTCTTCTCCTCTCATCTCGGGGTGTT +
Preference number: 6 (lower is better)
Translates to: RRVSLIEFQGTS*CWALLLSSRGV
Trigger: AACACCCCGAGATGAGAGGAGAAGAGCCCAGCACAACGAAGTTCCTTGAAATTCGATGAGACTTACCCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS GCA 72 bp GATCCCTCCTTTACTCGCTCCCGTCTTGCTGTTGTCTaGGTTACAGTCTGGAATGATTTTCGAAAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: DPSFTRSRLAVV*VTVWNDFRKLD
Trigger: GTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCGAGTAAAGGAGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS GCA 72 bp CTTTCTCTGTTCCTCCATCCCGTCCCCTCATTGCTGTaGTTGGGGTTTACTGCATTCTCTGCAATTAACAGG +
Preference number: 6 (lower is better)
Translates to: LSLFLHPVPSLL*LGFTAFSAINR
Trigger: CCTGTTAATTGCAGAGAATGCAGTAAACCCCAAGCACAGCAATGAGGGGACGGGATGGAGGAACAGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596380.5
ENST00000607959.5
CDS CAA 72 bp GACAGGATCCCTCCTTTACTCGCTCCCGTCTTGCTGTaGTCTGCGTTACAGTCTGGAATGATTTTCGAAAGC +
Preference number: 6 (lower is better)
Translates to: DRIPPLLAPVLL*SALQSGMIFES
Trigger: GCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCGAGTAAAGGAGGGATCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000222305.8
ENST00000343550.9
ENST00000379134.7
ENST00000594064.5
ENST00000599625.1
ENST00000600341.5
ENST00000600898.1
ENST00000607959.5
CDS CAA 72 bp TCTCTGTTCCTCCATCCCGTCCCCTCATTGCTGTGCTaGGGGTTTACTGCATTCTCTGCAATTAACAGGAGT +
Preference number: 6 (lower is better)
Translates to: SLFLHPVPSLLC*GFTAFSAINRS
Trigger: ACTCCTGTTAATTGCAGAGAATGCAGTAAACCCCAAGCACAGCAATGAGGGGACGGGATGGAGGAACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596380.5
ENST00000607959.5
CDS CCA 72 bp GTAAGTCTCATCGAATTTCAAGGAACTTCGTTGTGCTaGGCTCTTCTCCTCTCATCTCGGGGTGTTCTGGTT +
Preference number: 6 (lower is better)
Translates to: VSLIEFQGTSLC*ALLLSSRGVLV
Trigger: AACCAGAACACCCCGAGATGAGAGGAGAAGAGCCCAGCACAACGAAGTTCCTTGAAATTCGATGAGACTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597671.5
CDS GCA 72 bp TCAAAGGCCAGGCACTTGGAGATCATTTTGCAGGCCTaGCCCACCATACTTGTACAAATTTTAATCGACAGT +
Preference number: 6 (lower is better)
Translates to: SKARHLEIILQA*PTILVQILIDS
Trigger: ACTGTCGATTAAAATTTGTACAAGTATGGTGGGGCAGGCCTGCAAAATGATCTCCAAGTGCCTGGCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000600898.1
CDS TCA 72 bp AAATTTCTCATGGTAATTGGCATCACTGGCTTCTTTTaGGAAATGGAGCTCTGGTCACAGTGGGCACATACT +
Preference number: 6 (lower is better)
Translates to: KFLMVIGITGFF*EMELWSQWAHT
Trigger: AGTATGTGCCCACTGTGACCAGAGCTCCATTTCTCAAAAGAAGCCAGTGATGCCAATTACCATGAGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000600898.1
CDS CCA 72 bp AAAAATAAGGAAATTTCTCATGGTAATTGGCATCACTaGCTTCTTTTGAGAAATGGAGCTCTGGTCACAGTG +
Preference number: 6 (lower is better)
Translates to: KNKEISHGNWHH*LLLRNGALVTV
Trigger: CACTGTGACCAGAGCTCCATTTCTCAAAAGAAGCCAGTGATGCCAATTACCATGAGAAATTTCCTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594264.1
ENST00000600898.1