RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158773

Ensembl transcript IDs: ENST00000368019.5, ENST00000368020.5, ENST00000368021.7, ENST00000472217.1, ENST00000473969.6, ENST00000491629.5, ENST00000496363.5, ENST00000528768.5, ENST00000529476.1

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGTaGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTC +
Preference number: 1 (lower is better)
Translates to: TCIVREEHKGPGAAW*GWARLSVHVHIVCF
Trigger: GAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCACCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR GCA 90 bp CCAAGTGGGCCCCTGCCTGTTGTTCTCTCTGGCTCCAGAGATGTCTaGATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGC +
Preference number: 1 (lower is better)
Translates to: PSGPLPVVLSGSRDV*IGLSFSLANLLFMG
Trigger: GCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAGCCAGAGAGAACAACAGGCAGGGGCCCACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR GCA 90 bp TGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTTGGTCAAGTCCCTaGAGTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: CCRSTSLSSCSWSSP*SSSDKRWLLCRSSW
Trigger: CCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR CCA 90 bp AGATCTTCCACCTGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTTaGTCAAGTCCCTGCAGTTCTTCAGACAAGCGGTGGTTACTCTGC +
Preference number: 1 (lower is better)
Translates to: RSSTCCRSTSLSSCS*SSPCSSSDKRWLLC
Trigger: GCAGAGTAACCACCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTGGAAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR TCA 90 bp ACTGCTAAACATCCTTCCCTCACTTCTTGTGTAAGCTTGCTCCCCTaGGCCACAGGTTGCACATCTAAACCTCAGCTCCAGGGAAAGGAA +
Preference number: 1 (lower is better)
Translates to: TAKHPSLTSCVSLLP*ATGCTSKPQLQGKE
Trigger: TTCCTTTCCCTGGAGCTGAGGTTTAGATGTGCAACCTGTGGCTCAGGGGAGCAAGCTTACACAAGAAGTGAGGGAAGGATGTTTAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR GCA 90 bp TTTTTAAGATCTTCCACCTGTTGTCGAAGCACGTCATTGTCCAGCTaGAGTTGGTCAAGTCCCTGCAGTTCTTCAGACAAGCGGTGGTTA +
Preference number: 1 (lower is better)
Translates to: FLRSSTCCRSTSLSS*SWSSPCSSSDKRWL
Trigger: TAACCACCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTGGAAGATCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR TCA 90 bp TTGCTGTCATTCTTGATGACGACCTCTAATCCGTGGTGCCGCAACTaGGCTCGAAGCAGCAGATTCTTGTTTTTAAGATCTTCCACCTGT +
Preference number: 1 (lower is better)
Translates to: LLSFLMTTSNPWCRN*ARSSRFLFLRSSTC
Trigger: ACAGGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCGAGCTCAGTTGCGGCACCACGGATTAGAGGTCGTCATCAAGAATGACAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR CAA 90 bp GGGCTGCATGGTGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATaGTGTGTTTCACACCACTGCAGGCCGCCATATCACAGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: GLHGGGGQGCQCTST*CVSHHCRPPYHRAS
Trigger: TGAGGCCCTGTGATATGGCGGCCTGCAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCACCATGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR TCA 90 bp CACTTCATTATGCTGAGCCCTGCGTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGGCAGGGTAGCCACTaGTGGCGCCAGTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: HFIMLSPAFLIPSRPGSFWQGSH*WRQFPQ
Trigger: CTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCA...GAAGCTCCCCGGACGACTCGGGATGAGAAACGCAGGGCTCAGCATAATGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR GCA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGGGGCAAGGCTGTCAGTaGACGTCCACATTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWGQGCQ*TSTLCV
Trigger: AACACACAATGTGGACGTGCACTGACAGCCTTGCCC...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR CCA 90 bp CCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAAACGCTGCATGGTGGGGGTaGGCAAGGCTGTCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: PQLLTGQSPLHGHQPLLNAAWWG*ARLSVH
Trigger: GTGCACTGACAGCCTTGCCCACCCCCACCATGCAGC...GTTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR CCA 90 bp GGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCCCAGGGGCTGCATGGTaGGGGTGGGCAAGGCTGTCA +
Preference number: 2 (lower is better)
Translates to: GHSKQAQDKPQSLVCPVSPGAAW*GWARLS
Trigger: TGACAGCCTTGCCCACCCCCACCATGCAGCCCCTGG...GGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR GCA 90 bp ATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCCTTCCCCCTGTCCCATaGCAGAAGTGGGGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: IGLSFSLANLLFMGTSHCLPPVP*QKWGSE
Trigger: TTCACTGCCCCACTTCTGGCATGGGACAGGGGGAAG...GCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR TCA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCAAGGACACACCTTCTaGACTTCCCCCTGTCCCATG +
Preference number: 2 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLQGHTF*TSPCPM
Trigger: CATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTG...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTATGCTCCTGGGCTATCTaGAGTTCTTGGGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLCSWAI*SSWAQS
Trigger: GCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCA...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR GCA 90 bp GGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCAGGTGCTCCTGGGCTATCTaGAGTTCTTGGGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: GGQGCQCTSTLCVSHHCRCSWAI*SSWAQS
Trigger: GCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCA...CCTGCAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR CCA 90 bp CACCTGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTTGGTCAAGTCCCTGCAGTCACCGCCTGGGTCATaGATTGAGTGGCAGGGTAGC +
Preference number: 2 (lower is better)
Translates to: HLLSKHVIVQLQLVKSLQSPPGS*IEWQGS
Trigger: GCTACCCTGCCACTCAATCCATGACCCAGGCGGTGA...CTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CCA 90 bp GTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGACTTCGGGGAATAAGGGTGAGCTCCCACTGCCGTGCTaGGGAAGTAAGTATAGTGCG +
Preference number: 2 (lower is better)
Translates to: VSHPESSGELLTSGNKGELPLPC*GSKYSA
Trigger: CGCACTATACTTACTTCCCCAGCACGGCAGTGGGAG...CTCACCCTTATTCCCCGAAGTCAGAAGCTCCCCGGACGACTCGGGATGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR TCA 90 bp CTCTGGCTCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCAAGGACACACCTTCTaGACTTCCCCCTGTCCCATG +
Preference number: 2 (lower is better)
Translates to: LWLQRCLHRPQLLTGQSPQGHTF*TSPCPM
Trigger: CATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTG...AGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAGCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR GCA 90 bp GTGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTACGGGATTAGGCTGTTaGTCCTGGGCTATCTGCAGT +
Preference number: 2 (lower is better)
Translates to: VGVGKAVSARPHCVFHTTTGLGC*SWAICS
Trigger: ACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGT...AGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTACATGGAGACAGCACATaGATTGTGCGAGAGGAGCAC +
Preference number: 2 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLHGDST*IVREEH
Trigger: GTGCTCCTCTCGCACAATGCATGTGCTGTCTCCATG...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR CCA 90 bp ATGGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATTTAGGCTGTTGCTCCTaGGCTATCTGCAGTTCTTGG +
Preference number: 2 (lower is better)
Translates to: METAHALCERSTRAQGLHLGCCS*AICSSW
Trigger: CCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAA...ATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR TCA 90 bp GTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGACTTCGGGGAATAAGGGTGAGATCATCACAAAGAATTaGCCAGTGCCAGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: VSHPESSGELLTSGNKGEIITKN*PVPGGV
Trigger: GACCCCTCCTGGCACTGGTCAATTCTTTGTGATGAT...CTCACCCTTATTCCCCGAAGTCAGAAGCTCCCCGGACGACTCGGGATGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR GCA 90 bp CCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAAACAAGAACCAATGGAAGTaGCAGAGTCCTGGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: PQLLTGQSPLHGHQPLLNKNQWK*QSPGAS
Trigger: GCTTGCCCCAGGACTCTGGCACTTCCATTGGTTCTT...GTTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR GCA 90 bp GTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGACTTCGGGGAATAAGGGTGAGCATCTCCCACTGCCGTaGTGGGGAAGTAAGTATAGT +
Preference number: 2 (lower is better)
Translates to: VSHPESSGELLTSGNKGEHLPLP*WGSKYS
Trigger: ACTATACTTACTTCCCCAGCACGGCAGTGGGAGATG...CTCACCCTTATTCCCCGAAGTCAGAAGCTCCCCGGACGACTCGGGATGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CCA 90 bp ATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCGAAAGGAAGAACCAATaGAAGTGCCAGAGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: IGLSFSLANLLFMGTSHCERKNQ*KCQSPG
Trigger: CCCAGGACTCTGGCACTTCCATTGGTTCTTCCTTTC...GCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR TCA 90 bp CTCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGTAAGCTTGCTCCCCTaGGCCACAGGTTGCACATCT +
Preference number: 2 (lower is better)
Translates to: LQRCLHRPQLLTGQSPLHVSLLP*ATGCTS
Trigger: AGATGTGCAACCTGTGGCTCAGGGGAGCAAGCTTAC...ATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR GCA 90 bp CTGCAGTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCTGCCCCATCTCCCACTaGCGTGCTGGGGAAGTAAGT +
Preference number: 2 (lower is better)
Translates to: LQFFRQAVVTLPKLLDIICPISH*RAGEVS
Trigger: ACTTACTTCCCCAGCACGGCAGTGGGAGATGGGGCA...GATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR GCA 90 bp CAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCTTTGGCAAAGAATTGACCAGTaGCAGGAGGGGTCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: QTSGGYSAEAPGYNHKLWQRIDQ*QEGSPA
Trigger: GGCAGGCGACCCCTCCTGGCACTGGTCAATTCTTTG...CCAAAGCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR GCA 90 bp GACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCTGCACGATCCATTATGCTGAGCCCTaGGTTTCTCATCCCGAGTCG +
Preference number: 2 (lower is better)
Translates to: DLVLSIEQSGIILESCTIHYAEP*VSHPES
Trigger: CGACTCGGGATGAGAAACGCAGGGCTCAGCATAATG...GATCGTGCAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATTAGGCTGTTGCTCCTaGGCTATCTGCAGTTCTTGG +
Preference number: 2 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVLGCCS*AICSSW
Trigger: CCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAA...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR CAA 90 bp AAGATCTTCCACCTGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTaGGTCAAGTCCCTGCAGTTCTTCAGACAAGCGGTGGTTACTCTG +
Preference number: 2 (lower is better)
Translates to: KIFHLLSKHVIVQLQ*VKSLQFFRQAVVTL
Trigger: CAGAGTAACCACCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTGGAAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR TCA 90 bp GACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCTGCACGATCTCCACTTCATTATGCTaGGCCCTGCGTTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: DLVLSIEQSGIILESCTISTSLC*ALRFSS
Trigger: GGATGAGAAACGCAGGGCTCAGCATAATGAAGTGGA...GATCGTGCAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR GCA 90 bp CAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCTTTGGCCCCTCCGTGTCAACTaGATCATCACTGGTGAAAGC +
Preference number: 2 (lower is better)
Translates to: QTSGGYSAEAPGYNHKLWPLRVN*IITGES
Trigger: GCTTTCACCAGTGATGATGCAGTTGACACGGAGGGG...CCAAAGCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CCA 90 bp CAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCTTTGGAGTCTGGGATTATCTTaGAGAGCTGCACGATCCAGT +
Preference number: 2 (lower is better)
Translates to: QTSGGYSAEAPGYNHKLWSLGLS*RAARSS
Trigger: ACTGGATCGTGCAGCTCTCCAAGATAATCCCAGACT...CCAAAGCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CCA 90 bp TTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCCTCCATAGAGCAGTCTaGGATTATCTTGGAGAGCTG +
Preference number: 2 (lower is better)
Translates to: FFRQAVVTLPKLLDIITSLHRAV*DYLGEL
Trigger: CAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAG...GCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CCA 90 bp CGAAGCAGCAGATTCTTGTTTTTAAGATCTTCCACCTGTTGTCGAAGCACGTCATCTTCAGACAAGCGGTaGTTACTCTGCCGAAGCTCC +
Preference number: 2 (lower is better)
Translates to: RSSRFLFLRSSTCCRSTSSSDKR*LLCRSS
Trigger: GGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGA...TGACGTGCTTCGACAACAGGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR GCA 72 bp CTCGGCGGCGACGCTCCACTTCATTATGCTGAGCCCTaGGTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: LGGDAPLHYAEP*VSHPESSGELL
Trigger: CAGAAGCTCCCCGGACGACTCGGGATGAGAAACGCAGGGCTCAGCATAATGAAGTGGAGCGTCGCCGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CAA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGGGCTATCTGCAGTTCTaGGGCCCAAAGCCCCTGAAT +
Preference number: 3 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWGYLQF*GPKPLN
Trigger: ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCC...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR GCA 72 bp GGGGCAGTGAAGGAAAGGGGCACGGGATTAGGCTGTTaGTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: GAVKERGTGLGC*SWAICSSWAQS
Trigger: GCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTGCCCCTTTCCTTCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR CAA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCACGGGATTAGGCTGTaGCTCCTGGGCTATCTGCAG +
Preference number: 3 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLHGIRL*LLGYLQ
Trigger: CTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR CAA 90 bp ATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCGGCTATCTGCAGTTCTaGGGCCCAAAGCCCCTGAAT +
Preference number: 3 (lower is better)
Translates to: IGLSFSLANLLFMGTSHCGYLQF*GPKPLN
Trigger: ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCC...GCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR CAA 90 bp CACCTGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTTGGTCAAGTCCCTGCAGATCCAGTTGTTGATCTaGTCTCGGCGGCGACGCTCC +
Preference number: 3 (lower is better)
Translates to: HLLSKHVIVQLQLVKSLQIQLLI*SRRRRS
Trigger: GGAGCGTCGCCGCCGAGACAAGATCAACAACTGGAT...CTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR CCA 72 bp CAGGGAAAGGAAGAACCAATGGAAGTGCCAGAGTCCTaGGGCAAGCCAGAGCATCACCTGTCAGCAAACCTC +
Preference number: 3 (lower is better)
Translates to: QGKEEPMEVPES*GKPEHHLSANL
Trigger: GAGGTTTGCTGACAGGTGATGCTCTGGCTTGCCCCAGGACTCTGGCACTTCCATTGGTTCTTCCTTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR GCA 72 bp AGCACGTCATTGTCCAGCTGCAGTTGGTCAAGTCCCTaGAGTTCTTCAGACAAGCGGTGGTTACTCTGCCGA +
Preference number: 3 (lower is better)
Translates to: STSLSSCSWSSP*SSSDKRWLLCR
Trigger: TCGGCAGAGTAACCACCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR CCA 72 bp ACCTGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTTaGTCAAGTCCCTGCAGTTCTTCAGACAAGCGGTGG +
Preference number: 3 (lower is better)
Translates to: TCCRSTSLSSCS*SSPCSSSDKRW
Trigger: CCACCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR TCA 72 bp CATCCTTCCCTCACTTCTTGTGTAAGCTTGCTCCCCTaGGCCACAGGTTGCACATCTAAACCTCAGCTCCAG +
Preference number: 3 (lower is better)
Translates to: HPSLTSCVSLLP*ATGCTSKPQLQ
Trigger: CTGGAGCTGAGGTTTAGATGTGCAACCTGTGGCTCAGGGGAGCAAGCTTACACAAGAAGTGAGGGAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR-3UTR CAA 90 bp CTCTGGCCAGACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCCATCATCACAAAGAATaGACCAGTGCCAGGAGGGGT +
Preference number: 3 (lower is better)
Translates to: LWPDLVLSIEQSGIILESHHHKE*TSARRG
Trigger: ACCCCTCCTGGCACTGGTCAATTCTTTGTGATGATG...GCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTCTGGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CAA 90 bp GCAGTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACTGCACGATCCAGTTGTaGATCTTGTCTCGGCGGCGA +
Preference number: 3 (lower is better)
Translates to: AVLQTSGGYSAEAPGYNHCTIQL*ILSRRR
Trigger: TCGCCGCCGAGACAAGATCAACAACTGGATCGTGCA...GTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAACTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR GCA 72 bp TCTTCCACCTGTTGTCGAAGCACGTCATTGTCCAGCTaGAGTTGGTCAAGTCCCTGCAGTTCTTCAGACAAG +
Preference number: 3 (lower is better)
Translates to: SSTCCRSTSLSS*SWSSPCSSSDK
Trigger: CTTGTCTGAAGAACTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR-3UTR CAA 90 bp TTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCCAGTCTGGGATTATCTaGGAGAGCTGCACGATCCAG +
Preference number: 3 (lower is better)
Translates to: FFRQAVVTLPKLLDIITSQSGII*ESCTIQ
Trigger: CTGGATCGTGCAGCTCTCCAAGATAATCCCAGACTG...GCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR TCA 72 bp TTCTTGATGACGACCTCTAATCCGTGGTGCCGCAACTaGGCTCGAAGCAGCAGATTCTTGTTTTTAAGATCT +
Preference number: 3 (lower is better)
Translates to: FLMTTSNPWCRN*ARSSRFLFLRS
Trigger: AGATCTTAAAAACAAGAATCTGCTGCTTCGAGCTCAGTTGCGGCACCACGGATTAGAGGTCGTCATCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCACCAGGGGCTGCATGGTaGGGGTGGGCAAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPPGAAW*GWARLS
Trigger: TGACAGCCTTGCCCACCCCCACCATGCAGCCCCTGG...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCTGGCAGGGTAGCCACTaGTGGCGCCAGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPWQGSH*WRQFPQ
Trigger: CTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCA...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATGGCAGGGTAGCCACTaGTGGCGCCAGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPWQGSH*WRQFPQ
Trigger: CTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCA...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGCTTCCCCCTGTCCCATaGCAGAAGTGGGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWLPPVP*QKWGSE
Trigger: TTCACTGCCCCACTTCTGGCATGGGACAGGGGGAAG...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp ATGGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGCTGCATGGTGGGGGTaGGCAAGGCTGTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: METAHALCERSTRAQGLHAAWWG*ARLSVH
Trigger: GTGCACTGACAGCCTTGCCCACCCCCACCATGCAGC...ATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGTTCGGAAGACGTACTTaGCGTTGGGGTCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWFGRRT*RWGQGR
Trigger: CCTTCCCTGACCCCAACGTCAAGTACGTCTTCCGAA...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp CACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCCGTGGTGCCGCAACTaGGCTCGAAGCAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: HGIRLLLLGYLQFLGPKPPWCRN*ARSSRF
Trigger: GAATCTGCTGCTTCGAGCTCAGTTGCGGCACCACGG...GGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp TTCAAGGACACACCTTCTGAACTTCCCCCTGTCCCATGCCAGAAGTGGGGCAGTCCAGGGGCTGCATGGTaGGGGTGGGCAAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FKDTPSELPPVPCQKWGSPGAAW*GWARLS
Trigger: TGACAGCCTTGCCCACCCCCACCATGCAGCCCCTGG...ACTGCCCCACTTCTGGCATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCGCACGATCCAGTTGTTaGTCTTGTCTCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPARSSC*SCLGGD
Trigger: GTCGCCGCCGAGACAAGATCAACAACTGGATCGTGC...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp CACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCGCACGATCCAGTTGTTaGTCTTGTCTCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: HGIRLLLLGYLQFLGPKPARSSC*SCLGGD
Trigger: GTCGCCGCCGAGACAAGATCAACAACTGGATCGTGC...GGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCCGTGGTGCCGCAACTaGGCTCGAAGCAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLPWCRN*ARSSRF
Trigger: GAATCTGCTGCTTCGAGCTCAGTTGCGGCACCACGG...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCGGCGACGCTCCACTTCATTATGCTGAGCCCTGCGTTTCTCATCCCGAGTCGTCAAAGAATTGACCAGTaGCAGGAGGGGTCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AATLHFIMLSPAFLIPSRQRIDQ*QEGSPA
Trigger: GGCAGGCGACCCCTCCTGGCACTGGTCAATTCTTTG...ACGACTCGGGATGAGAAACGCAGGGCTCAGCATAATGAAGTGGAGCGTCGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp ATGGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATTCACCGCCTGGGTCATaGATTGAGTGGCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: METAHALCERSTRAQGLHSPPGS*IEWQGS
Trigger: GCTACCCTGCCACTCAATCCATGACCCAGGCGGTGA...ATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp ACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTCACCGCCTGGGTCATaGATTGAGTGGCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TGLGCCSWAICSSWAQSPSPPGS*IEWQGS
Trigger: GCTACCCTGCCACTCAATCCATGACCCAGGCGGTGA...GGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp TTCAAGGACACACCTTCTGAACTTCCCCCTGTCCCATGCCAGAAGTGGGGCAGTGCTGCATGGTGGGGGTaGGCAAGGCTGTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: FKDTPSELPPVPCQKWGSAAWWG*ARLSVH
Trigger: GTGCACTGACAGCCTTGCCCACCCCCACCATGCAGC...ACTGCCCCACTTCTGGCATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCGAAGTGCCAGAGTCCTaGGGCAAGCCAGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: HGIRLLLLGYLQFLGPKPEVPES*GKPEHH
Trigger: GTGATGCTCTGGCTTGCCCCAGGACTCTGGCACTTC...GGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCTTCGGAAGACGTACTTaGCGTTGGGGTCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPFGRRT*RWGQGR
Trigger: CCTTCCCTGACCCCAACGTCAAGTACGTCTTCCGAA...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCTGGCAGGGTAGCCACTaGTGGCGCCAGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GHSKQAQDKPQSLVCPVSWQGSH*WRQFPQ
Trigger: CTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCA...GGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGTGGGCCCAAAGCCCCTaGATCCCCATAGTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLWAQSP*IPIVSC
Trigger: GCAACTAACTATGGGGATTCAGGGGCTTTGGGCCCA...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGCCTGATTCACAGGCCTaGGTGCTAAGTCCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWPDSQA*VLSPFL
Trigger: TAGGAAAGGACTTAGCACTCAGGCCTGTGAATCAGG...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368020.5
CDS-3UTR TCA 90 bp CACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCGTAAGCTTGCTCCCCTaGGCCACAGGTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: HGIRLLLLGYLQFLGPKPVSLLP*ATGCTS
Trigger: AGATGTGCAACCTGTGGCTCAGGGGAGCAAGCTTAC...GGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp CTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATTGCCCCATCTCCCACTaGCGTGCTGGGGAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LLLLGYLQFLGPKPLNPHCPISH*RAGEVS
Trigger: ACTTACTTCCCCAGCACGGCAGTGGGAGATGGGGCA...ATGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGTGCCCCATCTCCCACTaGCGTGCTGGGGAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLCPISH*RAGEVS
Trigger: ACTTACTTCCCCAGCACGGCAGTGGGAGATGGGGCA...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCAAAAGAATTGACCCCCTaGCCCATCTCCCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPKELTP*PISHCR
Trigger: ACGGCAGTGGGAGATGGGGCAGGGGGTCAATTCTTT...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368019.5
CDS-3UTR GCA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGAGTTGGTCAAGTCCCTaGAGTTCTTCAGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWSWSSP*SSSDKR
Trigger: CCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACT...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCTGCTCCTGGGCTATCTaGAGTTCTTGGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPCSWAI*SSWAQS
Trigger: GCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCA...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp ACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGCTCCTGGGCTATCTaGAGTTCTTGGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TGLGCCSWAICSSWAQSPCSWAI*SSWAQS
Trigger: GCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCA...GGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCAAAGAATTGACCAGTaGCAGGAGGGGTCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLQRIDQ*QEGSPA
Trigger: GGCAGGCGACCCCTCCTGGCACTGGTCAATTCTTTG...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTACAAAGAATTGACCAGTaGCAGGAGGGGTCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLQRIDQ*QEGSPA
Trigger: GGCAGGCGACCCCTCCTGGCACTGGTCAATTCTTTG...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTACTTCCCCCTGTCCCATaGCAGAAGTGGGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLLPPVP*QKWGSE
Trigger: TTCACTGCCCCACTTCTGGCATGGGACAGGGGGAAG...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCAACCCTGTACATCACCTaGCCCCCATTCTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPTLYIT*PPFSVR
Trigger: CCGAACTGAGAATGGGGGCCAGGTGATGTACAGGGT...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATTCACCGCCTGGGTCATaGATTGAGTGGCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLLLGYLQFLGPKPLNPHSPPGS*IEWQGS
Trigger: GCTACCCTGCCACTCAATCCATGACCCAGGCGGTGA...ATGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGCTCCCACTGCCGTGCTaGGGAAGTAAGTATAGTGCG +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLLPLPC*GSKYSA
Trigger: CGCACTATACTTACTTCCCCAGCACGGCAGTGGGAG...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGTTGTCCAGCTGCAGTTaGTCAAGTCCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWLSSCS*SSPCSS
Trigger: AGAACTGCAGGGACTTGACCAACTGCAGCTGGACAA...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
3UTR CAA 72 bp GTGTGTCCAGTATCCAGCATGGAGACAGCACATGCATaGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VCPVSSMETAHA*CERSTRAQGLH
Trigger: ATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCCATGCTGGATACTGGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp CCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAAACGCCACTGCACCTTCCTaGATCTGCACTGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PQLLTGQSPLHGHQPLLNATAPS*ICTVPS
Trigger: AGAGGGGACAGTGCAGATTCAGGAAGGTGCAGTGGC...GTTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGATCATCACAAAGAATTaGCCCCCTGCCCCATCTCCC +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLIITKN*PPAPSP
Trigger: GGGAGATGGGGCAGGGGGTCAATTCTTTGTGATGAT...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368019.5
CDS-3UTR TCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCGTGGTGCCGCAACTaGGCTCGAAGCAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNPWCRN*ARSSRF
Trigger: GAATCTGCTGCTTCGAGCTCAGTTGCGGCACCACGG...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTACAAGGACACACCTTCTaGACTTCCCCCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLQGHTF*TSPCPM
Trigger: CATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTG...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGGTAAGCTTGCTCCCCTaGGCCACAGGTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLVSLLP*ATGCTS
Trigger: AGATGTGCAACCTGTGGCTCAGGGGAGCAAGCTTAC...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCTTCCCCAGTAGCCACTaGACCTTCCTGAATCTGCAC +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPFPSSH*TFLNLH
Trigger: GTGCAGATTCAGGAAGGTGCAGTGGCTACTGGGGAA...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCACCCCTCCGTGTCAACTaGATCATCACTGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPPLRVN*IITGES
Trigger: GCTTTCACCAGTGATGATGCAGTTGACACGGAGGGG...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCACATTATGCTGAGCCCTaGGTTTCTCATCCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPHYAEP*VSHPES
Trigger: CGACTCGGGATGAGAAACGCAGGGCTCAGCATAATG...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCAACGTCATTGTCCAGCTaGAGTTGGTCAAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPTSLSS*SWSSPC
Trigger: GCAGGGACTTGACCAACTGCAGCTGGACAATGACGT...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCACGTCATTGTCCAGCTaGAGTTGGTCAAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPTSLSS*SWSSPC
Trigger: GCAGGGACTTGACCAACTGCAGCTGGACAATGACGT...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGACGGGATTAGGCTGTTaGTCCTGGGCTATCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLTGLGC*SWAICS
Trigger: ACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGT...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCTGTGTTTCACACCACTaGAGGCCGCCATATCACAGG +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPCVSHH*RPPYHR
Trigger: CCTGTGATATGGCGGCCTGCAGTGGTGTGAAACACA...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp CACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCGGGCAAGGCTGTCAGTaGACGTCCACATTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: HGIRLLLLGYLQFLGPKPGQGCQ*TSTLCV
Trigger: AACACACAATGTGGACGTGCACTGACAGCCTTGCCC...GGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAACAGCACATGCATTGTaGGAGAGGAGCACAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLTAHAL*ERSTRA
Trigger: GGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGT...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAAGAACCAATGGAAGTaGCAGAGTCCTGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLKNQWK*QSPGAS
Trigger: GCTTGCCCCAGGACTCTGGCACTTCCATTGGTTCTT...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCGGCTCCAGAGATGTCTaGATAGGCCTCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPGSRDV*IGLSFS
Trigger: TGAGAAGCTGAGGCCTATGCAGACATCTCTGGAGCC...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAACCCTGTACATCACCTaGCCCCCATTCTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLTLYIT*PPFSVR
Trigger: CCGAACTGAGAATGGGGGCCAGGTGATGTACAGGGT...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGATCCCACCTTTACTCTaGCCAGACTTGGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLIPPLL*PDLVLS
Trigger: GGAGAGCACCAAGTCTGGCCAGAGTAAAGGTGGGAT...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCATCCCACCTTTACTCTaGCCAGACTTGGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HGIRLLLLGYLQFLGPKPIPPLL*PDLVLS
Trigger: GGAGAGCACCAAGTCTGGCCAGAGTAAAGGTGGGAT...GGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCGGTCTTTGTATCTCCTaGTTCACAGGCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPGLCIS*FTGLSA
Trigger: AGCACTCAGGCCTGTGAATCAGGAGATACAAAGACC...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATGCCACTGCACCTTCCTaGATCTGCACTGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNATAPS*ICTVPS
Trigger: AGAGGGGACAGTGCAGATTCAGGAAGGTGCAGTGGC...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp ATGGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATTCCACTTCATTATGCTaGGCCCTGCGTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: METAHALCERSTRAQGLHSTSLC*ALRFSS
Trigger: GGATGAGAAACGCAGGGCTCAGCATAATGAAGTGGA...ATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCGCACGATCCAGTTGTTaGTCTTGTCTCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: GHSKQAQDKPQSLVCPVSARSSC*SCLGGD
Trigger: GTCGCCGCCGAGACAAGATCAACAACTGGATCGTGC...GGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAGTTGGTCAAGTCCCTaGAGTTCTTCAGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLSWSSP*SSSDKR
Trigger: CCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACT...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp CACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCAGTTGGTCAAGTCCCTaGAGTTCTTCAGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: HGIRLLLLGYLQFLGPKPSWSSP*SSSDKR
Trigger: CCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACT...GGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp CCCTGCGTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGACTTCGGGGAATAAGAGTTGGTCAAGTCCCTaGAGTTCTTCAGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: PCVSHPESSGELLTSGNKSWSSP*SSSDKR
Trigger: CCGCTTGTCTGAAGAACTGCAGGGACTTGACCAACT...CTTATTCCCCGAAGTCAGAAGCTCCCCGGACGACTCGGGATGAGAAACGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR GCA 90 bp CTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATACGTCATTGTCCAGCTaGAGTTGGTCAAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLLGYLQFLGPKPLNPHTSLSS*SWSSPC
Trigger: GCAGGGACTTGACCAACTGCAGCTGGACAATGACGT...ATGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTATGTGTTTCACACCACTaGAGGCCGCCATATCACAGG +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLCVSHH*RPPYHR
Trigger: CCTGTGATATGGCGGCCTGCAGTGGTGTGAAACACA...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGGGCTCCAGAGATGTCTaGATAGGCCTCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLGSRDV*IGLSFS
Trigger: TGAGAAGCTGAGGCCTATGCAGACATCTCTGGAGCC...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAATCTCCATAGACAGCTaGTCATGCGCACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLISIDS*SCALPA
Trigger: GGCTGGAAGTGCGCATGAGCAGCTGTCTATGGAGAT...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368021.7
CDS-3UTR GCA 90 bp GTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGACTTCGGGGAATAAGGGTGAGATCTCCATAGACAGCTaGTCATGCGCACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VSHPESSGELLTSGNKGEISIDS*SCALPA
Trigger: GGCTGGAAGTGCGCATGAGCAGCTGTCTATGGAGAT...CTCACCCTTATTCCCCGAAGTCAGAAGCTCCCCGGACGACTCGGGATGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp TTCAAGGACACACCTTCTGAACTTCCCCCTGTCCCATGCCAGAAGTGGGGCAGTCTCCCACTGCCGTGCTaGGGAAGTAAGTATAGTGCG +
Preference number: 4 (lower is better)
Translates to: FKDTPSELPPVPCQKWGSLPLPC*GSKYSA
Trigger: CGCACTATACTTACTTCCCCAGCACGGCAGTGGGAG...ACTGCCCCACTTCTGGCATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGTCTTCAGACAAGCGGTaGTTACTCTGCCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLSSDKR*LLCRSS
Trigger: GGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGA...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTATCTTCAGACAAGCGGTaGTTACTCTGCCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLSSDKR*LLCRSS
Trigger: GGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGA...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATTGTCCAGCTGCAGTTaGTCAAGTCCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPLSSCS*SSPCSS
Trigger: AGAACTGCAGGGACTTGACCAACTGCAGCTGGACAA...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGTTAGGCTGTTGCTCCTaGGCTATCTGCAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLLGCCS*AICSSW
Trigger: CCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAA...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTAGAAGTGCCAGAGTCCTaGGGCAAGCCAGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVEVPES*GKPEHH
Trigger: GTGATGCTCTGGCTTGCCCCAGGACTCTGGCACTTC...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp AAGGGGCACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCACCAATCTCCTCTTCATaGGCACCAGCCACTGCTAAA +
Preference number: 4 (lower is better)
Translates to: KGHGIRLLLLGYLQFLGPPISSS*APATAK
Trigger: TTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGG...TGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCAGGGCCTCAGCTTCTCACTaGCCAATCTCCTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: GGQGCQCTSTLCVSHHCRASASH*PISSSW
Trigger: CCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGC...CCTGCAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGGCCTGTTGTTCTCTCTaGCTCCAGAGATGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GIRLLLLGYLQFLGPKPLACCSL*LQRCLH
Trigger: ATGCAGACATCTCTGGAGCCAGAGAGAACAACAGGC...CAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GTGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGGTCTTTGTATCTCCTaGTTCACAGGCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: VGVGKAVSARPHCVFHTTGLCIS*FTGLSA
Trigger: AGCACTCAGGCCTGTGAATCAGGAGATACAAAGACC...AGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATTTCGGAAGACGTACTTaGCGTTGGGGTCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNFGRRT*RWGQGR
Trigger: CCTTCCCTGACCCCAACGTCAAGTACGTCTTCCGAA...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGTGGCAGGGTAGCCACTaGTGGCGCCAGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLQTSGGYSAEAPGYNHKWQGSH*WRQFPQ
Trigger: CTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCA...CTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR TCA 90 bp CTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATTCCACTTCATTATGCTaGGCCCTGCGTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLLLGYLQFLGPKPLNPHSTSLC*ALRFSS
Trigger: GGATGAGAAACGCAGGGCTCAGCATAATGAAGTGGA...ATGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTATCCACTTCATTATGCTaGGCCCTGCGTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLSTSLC*ALRFSS
Trigger: GGATGAGAAACGCAGGGCTCAGCATAATGAAGTGGA...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATTGGGCCCAAAGCCCCTaGATCCCCATAGTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNWAQSP*IPIVSC
Trigger: GCAACTAACTATGGGGATTCAGGGGCTTTGGGCCCA...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATGGGCCCAAAGCCCCTaGATCCCCATAGTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVWAQSP*IPIVSC
Trigger: GCAACTAACTATGGGGATTCAGGGGCTTTGGGCCCA...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp CACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCAGCCCTGATTCACAGGCCTaGGTGCTAAGTCCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HSKQAQDKPQSLVCPVSSPDSQA*VLSPAK
Trigger: CTTGGCCGGACTTAGCACTCAGGCCTGTGAATCAGG...GCTGGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368021.7
CDS-3UTR GCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCAGTTTCAGCTGTTTTCTaGTGCCCCTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPVSAVF*CPFISL
Trigger: CAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAAC...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp CTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATCATCTCCCACTGCCGTaGTGGGGAAGTAAGTATAGT +
Preference number: 4 (lower is better)
Translates to: LLLLGYLQFLGPKPLNPHHLPLP*WGSKYS
Trigger: ACTATACTTACTTCCCCAGCACGGCAGTGGGAGATG...ATGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTACATCTCCCACTGCCGTaGTGGGGAAGTAAGTATAGT +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLHLPLP*WGSKYS
Trigger: ACTATACTTACTTCCCCAGCACGGCAGTGGGAGATG...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp CCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAAACGGGCAAGGCTGTCAGTaGACGTCCACATTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PQLLTGQSPLHGHQPLLNGQGCQ*TSTLCV
Trigger: AACACACAATGTGGACGTGCACTGACAGCCTTGCCC...GTTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTAACAGCACATGCATTGTaGGAGAGGAGCACAAGGGCC +
Preference number: 4 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVTAHAL*ERSTRA
Trigger: GGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGT...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp TTCAAGGACACACCTTCTGAACTTCCCCCTGTCCCATGCCAGAAGTGGGGCAGTCATGGAGACAGCACATaGATTGTGCGAGAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: FKDTPSELPPVPCQKWGSHGDST*IVREEH
Trigger: GTGCTCCTCTCGCACAATGCATGTGCTGTCTCCATG...ACTGCCCCACTTCTGGCATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp ACACCTTCTGAACTTCCCCCTGTCCCATGCCAGAAGTGGGGCAGTGAAGGAAAGAAGAACCAATGGAAGTaGCAGAGTCCTGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: TPSELPPVPCQKWGSEGKKNQWK*QSPGAS
Trigger: GCTTGCCCCAGGACTCTGGCACTTCCATTGGTTCTT...CTTTCCTTCACTGCCCCACTTCTGGCATGGGACAGGGGGAAGTTCAGAAGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTAACCCTGTACATCACCTaGCCCCCATTCTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVTLYIT*PPFSVR
Trigger: CCGAACTGAGAATGGGGGCCAGGTGATGTACAGGGT...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATTGCCCCTCAGACACCTaGATCACCCTGTACATCACC +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNCPSDT*ITLYIT
Trigger: GGTGATGTACAGGGTGATCCAGGTGTCTGAGGGGCA...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCAAGTCTGGGATTATCTTaGAGAGCTGCACGATCCAGT +
Preference number: 4 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPSLGLS*RAARSS
Trigger: ACTGGATCGTGCAGCTCTCCAAGATAATCCCAGACT...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CCCTGCGTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGACTTCGGGGAATAAGAGTCTGGGATTATCTTaGAGAGCTGCACGATCCAGT +
Preference number: 4 (lower is better)
Translates to: PCVSHPESSGELLTSGNKSLGLS*RAARSS
Trigger: ACTGGATCGTGCAGCTCTCCAAGATAATCCCAGACT...CTTATTCCCCGAAGTCAGAAGCTCCCCGGACGACTCGGGATGAGAAACGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp CTCTGGCTCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTATCCCACCTTTACTCTaGCCAGACTTGGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LWLQRCLHRPQLLTGQSPIPPLL*PDLVLS
Trigger: GGAGAGCACCAAGTCTGGCCAGAGTAAAGGTGGGAT...AGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAGCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGACTTCGGGGAATAAGGGTGAGTTGTCCAGCTGCAGTTaGTCAAGTCCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VSHPESSGELLTSGNKGELSSCS*SSPCSS
Trigger: AGAACTGCAGGGACTTGACCAACTGCAGCTGGACAA...CTCACCCTTATTCCCCGAAGTCAGAAGCTCCCCGGACGACTCGGGATGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGTTAGGCTGTTGCTCCTaGGCTATCTGCAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLLGCCS*AICSSW
Trigger: CCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAA...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATTTAGGCTGTTGCTCCTaGGCTATCTGCAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLLGYLQFLGPKPLNPHLGCCS*AICSSW
Trigger: CCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAA...ATGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GTGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGAAAGGAAGAACCAATaGAAGTGCCAGAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VGVGKAVSARPHCVFHTTERKNQ*KCQSPG
Trigger: CCCAGGACTCTGGCACTTCCATTGGTTCTTCCTTTC...AGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAGAAAGGAAGAACCAATaGAAGTGCCAGAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLERKNQ*KCQSPG
Trigger: CCCAGGACTCTGGCACTTCCATTGGTTCTTCCTTTC...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CTCTGGCTCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTGCCTCAGCTTCTCACTaGCCAATCTCCTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LWLQRCLHRPQLLTGQSPASASH*PISSSW
Trigger: CCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGC...AGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAGCCAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp GTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCCGTGGTGCCGCAACTaGGCTCGAAGCAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: VLQTSGGYSAEAPGYNHKPWCRN*ARSSRF
Trigger: GAATCTGCTGCTTCGAGCTCAGTTGCGGCACCACGG...CTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR TCA 90 bp TTCAAGGACACACCTTCTGAACTTCCCCCTGTCCCATGCCAGAAGTGGGGCAGTATCATCACAAAGAATTaGCCAGTGCCAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FKDTPSELPPVPCQKWGSIITKN*PVPGGV
Trigger: GACCCCTCCTGGCACTGGTCAATTCTTTGTGATGAT...ACTGCCCCACTTCTGGCATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp CTCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATCAAGGACACACCTTCTaGACTTCCCCCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: LQRCLHRPQLLTGQSPLHQGHTF*TSPCPM
Trigger: CATGGGACAGGGGGAAGTTCAGAAGGTGTGTCCTTG...ATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp CAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCTTTGGCCTGATTCACAGGCCTaGGTGCTAAGTCCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QTSGGYSAEAPGYNHKLWPDSQA*VLSPAK
Trigger: CTTGGCCGGACTTAGCACTCAGGCCTGTGAATCAGG...CCAAAGCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR TCA 90 bp GACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCTGCACGATCACCCTGTACATCACTTaGCGTTGGGGTCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: DLVLSIEQSGIILESCTITLYIT*RWGQGR
Trigger: CCTTCCCTGACCCCAACGTCAAGTGATGTACAGGGT...GATCGTGCAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR GCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAGTTTCAGCTGTTTTCTaGTGCCCCTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLVSAVF*CPFISL
Trigger: CAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAAC...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCTCCGTGTCAACTaGATCATCACTGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNPLRVN*IITGES
Trigger: GCTTTCACCAGTGATGATGCAGTTGACACGGAGGGG...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTACCCCTCCGTGTCAACTaGATCATCACTGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVPLRVN*IITGES
Trigger: GCTTTCACCAGTGATGATGCAGTTGACACGGAGGGG...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCATTATGCTGAGCCCTaGGTTTCTCATCCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNHYAEP*VSHPES
Trigger: CGACTCGGGATGAGAAACGCAGGGCTCAGCATAATG...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTACAAGGCCGTCTCAGCTaGCGATTTTCTCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVQGRLS*RFSPTV
Trigger: CACAGTTGGAGAAAATCGGCAGCTGAGACGGCCTTG...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368021.7
CDS-3UTR CCA 90 bp TCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGTGCCCCTCAGACACCTaGATCACCCTGTACATCACC +
Preference number: 4 (lower is better)
Translates to: SRDVCIGLSFSLANLLFMCPSDT*ITLYIT
Trigger: GGTGATGTACAGGGTGATCCAGGTGTCTGAGGGGCA...CATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CTCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATCTCCCACTGCCGTGCTaGGGAAGTAAGTATAGTGCG +
Preference number: 4 (lower is better)
Translates to: LQRCLHRPQLLTGQSPLHLPLPC*GSKYSA
Trigger: CGCACTATACTTACTTCCCCAGCACGGCAGTGGGAG...ATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTACTCCATAGAGCAGTCTaGGATTATCTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLLHRAV*DYLGEL
Trigger: CAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAG...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CTTCATTATGCTGAGCCCTGCGTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGCTCCATAGAGCAGTCTaGGATTATCTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LHYAEPCVSHPESSGELLLHRAV*DYLGEL
Trigger: CAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAG...CAGAAGCTCCCCGGACGACTCGGGATGAGAAACGCAGGGCTCAGCATAATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATTCTTCAGACAAGCGGTaGTTACTCTGCCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNSSDKR*LLCRSS
Trigger: GGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGA...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp CTCTGGCCAGACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCGGTCTTTGTATCTCCTaGTTCACAGGCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LWPDLVLSIEQSGIILESGLCIS*FTGLSA
Trigger: AGCACTCAGGCCTGTGAATCAGGAGATACAAAGACC...GCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTCTGGCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR TCA 90 bp GTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGGCACGATCCAGTTGTTaGTCTTGTCTCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: VLQTSGGYSAEAPGYNHKARSSC*SCLGGD
Trigger: GTCGCCGCCGAGACAAGATCAACAACTGGATCGTGC...CTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR GCA 90 bp TTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCTGCCCCATCTCCCACTaGCGTGCTGGGGAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: FFRQAVVTLPKLLDIITSCPISH*RAGEVS
Trigger: ACTTACTTCCCCAGCACGGCAGTGGGAGATGGGGCA...GCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR GCA 90 bp TCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGCATTATGCTGAGCCCTaGGTTTCTCATCCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: SRDVCIGLSFSLANLLFMHYAEP*VSHPES
Trigger: CGACTCGGGATGAGAAACGCAGGGCTCAGCATAATG...CATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp TCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGACGGGATTAGGCTGTTaGTCCTGGGCTATCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRDVCIGLSFSLANLLFMTGLGC*SWAICS
Trigger: ACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGT...CATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp CTCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATCATGGAGACAGCACATaGATTGTGCGAGAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LQRCLHRPQLLTGQSPLHHGDST*IVREEH
Trigger: GTGCTCCTCTCGCACAATGCATGTGCTGTCTCCATG...ATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp TTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCTCACCGCCTGGGTCATaGATTGAGTGGCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FFRQAVVTLPKLLDIITSSPPGS*IEWQGS
Trigger: GCTACCCTGCCACTCAATCCATGACCCAGGCGGTGA...GCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp ACACCTTCTGAACTTCCCCCTGTCCCATGCCAGAAGTGGGGCAGTGAAGGAAAGAGTCTGGGATTATCTTaGAGAGCTGCACGATCCAGT +
Preference number: 4 (lower is better)
Translates to: TPSELPPVPCQKWGSEGKSLGLS*RAARSS
Trigger: ACTGGATCGTGCAGCTCTCCAAGATAATCCCAGACT...CTTTCCTTCACTGCCCCACTTCTGGCATGGGACAGGGGGAAGTTCAGAAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTACCAATCTCCTCTTCATaGGCACCAGCCACTGCTAAA +
Preference number: 4 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVPISSS*APATAK
Trigger: TTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGG...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCGCCTGTTGTTCTCTCTaGCTCCAGAGATGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GHSKQAQDKPQSLVCPVSACCSL*LQRCLH
Trigger: ATGCAGACATCTCTGGAGCCAGAGAGAACAACAGGC...GGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR TCA 90 bp CACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCAGCATCATCACAAAGAATTaGCCAGTGCCAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: HSKQAQDKPQSLVCPVSSIITKN*PVPGGV
Trigger: GACCCCTCCTGGCACTGGTCAATTCTTTGTGATGAT...GCTGGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATGTTTCAGCTGTTTTCTaGTGCCCCTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNVSAVF*CPFISL
Trigger: CAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAAC...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GCAGTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACCCCCTCCGTGTCAACTaGATCATCACTGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: AVLQTSGGYSAEAPGYNHPLRVN*IITGES
Trigger: GCTTTCACCAGTGATGATGCAGTTGACACGGAGGGG...GTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR GCA 90 bp CACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCAGCCATCTCCCACTGCCGTaGTGGGGAAGTAAGTATAGT +
Preference number: 4 (lower is better)
Translates to: HSKQAQDKPQSLVCPVSSHLPLP*WGSKYS
Trigger: ACTATACTTACTTCCCCAGCACGGCAGTGGGAGATG...GCTGGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp AGACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCTGCACGATCATTATGCTGAGCCCTaGGTTTCTCATCCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: RLGALHRAVWDYLGELHDHYAEP*VSHPES
Trigger: CGACTCGGGATGAGAAACGCAGGGCTCAGCATAATG...ATCGTGCAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR GCA 90 bp CTGCAGTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACGTCATTGTCCAGCTaGAGTTGGTCAAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LQFFRQAVVTLPKLLDIITSLSS*SWSSPC
Trigger: GCAGGGACTTGACCAACTGCAGCTGGACAATGACGT...GATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATAGTCTGGGATTATCTTaGAGAGCTGCACGATCCAGT +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNSLGLS*RAARSS
Trigger: ACTGGATCGTGCAGCTCTCCAAGATAATCCCAGACT...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCTCCATAGAGCAGTCTaGGATTATCTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNLHRAV*DYLGEL
Trigger: CAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAG...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTACTCCATAGAGCAGTCTaGGATTATCTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVLHRAV*DYLGEL
Trigger: CAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAG...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CCA 90 bp CAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCTTTGGATCCCACCTTTACTCTaGCCAGACTTGGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTSGGYSAEAPGYNHKLWIPPLL*PDLVLS
Trigger: GGAGAGCACCAAGTCTGGCCAGAGTAAAGGTGGGAT...CCAAAGCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp CACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCAGCTTGTCCAGCTGCAGTTaGTCAAGTCCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HSKQAQDKPQSLVCPVSSLSSCS*SSPCSS
Trigger: AGAACTGCAGGGACTTGACCAACTGCAGCTGGACAA...GCTGGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR GCA 90 bp GACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCTGCACGATCGTTTCAGCTGTTTTCTaGTGCCCCTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DLVLSIEQSGIILESCTIVSAVF*CPFISL
Trigger: CAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAAC...GATCGTGCAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR GCA 90 bp CAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCTTTGGCATCTCCCACTGCCGTaGTGGGGAAGTAAGTATAGT +
Preference number: 4 (lower is better)
Translates to: QTSGGYSAEAPGYNHKLWHLPLP*WGSKYS
Trigger: ACTATACTTACTTCCCCAGCACGGCAGTGGGAGATG...CCAAAGCTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR GCA 90 bp GTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGCAAGGCCGTCTCAGCTaGCGATTTTCTCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: VLQTSGGYSAEAPGYNHKQGRLS*RFSPTV
Trigger: CACAGTTGGAGAAAATCGGCAGCTGAGACGGCCTTG...CTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp GTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGTCTTCAGACAAGCGGTaGTTACTCTGCCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLQTSGGYSAEAPGYNHKSSDKR*LLCRSS
Trigger: GGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGA...CTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp GTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCACAAGTGCCCCTCAGACACCTaGATCACCCTGTACATCACT +
Preference number: 4 (lower is better)
Translates to: VLQTSGGYSAEAPGYNHKCPSDT*ITLYIT
Trigger: AGTGATGTACAGGGTGATCCAGGTGTCTGAGGGGCA...CTTGTGATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CCA 90 bp CGAAGCAGCAGATTCTTGTTTTTAAGATCTTCCACCTGTTGTCGAAGCACGTCACTCCCACTGCCGTGCTaGGGAAGTAAGTATAGTGCG +
Preference number: 4 (lower is better)
Translates to: RSSRFLFLRSSTCCRSTSLPLPC*GSKYSA
Trigger: CGCACTATACTTACTTCCCCAGCACGGCAGTGGGAG...TGACGTGCTTCGACAACAGGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR TCA 90 bp CGAAGCAGCAGATTCTTGTTTTTAAGATCTTCCACCTGTTGTCGAAGCACGTCATCCACTTCATTATGCTaGGCCCTGCGTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: RSSRFLFLRSSTCCRSTSSTSLC*ALRFSS
Trigger: GGATGAGAAACGCAGGGCTCAGCATAATGAAGTGGA...TGACGTGCTTCGACAACAGGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
3UTR CAA 72 bp TTTTTAAGATCTTCCACCTGTTGTCGAAGCACGTCATaGTCCAGCTGCAGTTGGTCAAGTCCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: FLRSSTCCRSTS*SSCSWSSPCSS
Trigger: AGAACTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTGGAAGATCTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGATCCAGTTGTTGATCTaGTCTCGGCGGCGACGCTCC +
Preference number: 5 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWIQLLI*SRRRRS
Trigger: GGAGCGTCGCCGCCGAGACAAGATCAACAACTGGAT...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGTGCACGATCCAGTTGTaGATCTTGTCTCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWCTIQL*ILSRRR
Trigger: TCGCCGCCGAGACAAGATCAACAACTGGATCGTGCA...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GCGGCGACGCTCCACTTCATTATGCTGAGCCCTGCGTTTCTCATCCCGAGTCGTATCCAGTTGTTGATCTaGTCTCGGCGGCGACGCTCC +
Preference number: 5 (lower is better)
Translates to: AATLHFIMLSPAFLIPSRIQLLI*SRRRRS
Trigger: GGAGCGTCGCCGCCGAGACAAGATCAACAACTGGAT...ACGACTCGGGATGAGAAACGCAGGGCTCAGCATAATGAAGTGGAGCGTCGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGTTACTCTGGCCAGACTaGGTGCTCTCCATAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWLLWPD*VLSIEQ
Trigger: CTGCTCTATGGAGAGCACCAAGTCTGGCCAGAGTAA...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GGGGCAGTGAAGGAAAGGGGCACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCGAGACAGCACATGCATaGTGCGAGAGGAGCACAAGG +
Preference number: 5 (lower is better)
Translates to: GAVKERGTGLGCCSWAICETAHA*CERSTR
Trigger: CCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTC...GCAGATAGCCCAGGAGCAACAGCCTAATCCCGTGCCCCTTTCCTTCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATATCCAGTTGTTGATCTaGTCTCGGCGGCGACGCTCC +
Preference number: 5 (lower is better)
Translates to: LLLLGYLQFLGPKPLNPHIQLLI*SRRRRS
Trigger: GGAGCGTCGCCGCCGAGACAAGATCAACAACTGGAT...ATGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GTGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTATCCAGTTGTTGATCTaGTCTCGGCGGCGACGCTCC +
Preference number: 5 (lower is better)
Translates to: VGVGKAVSARPHCVFHTTIQLLI*SRRRRS
Trigger: GGAGCGTCGCCGCCGAGACAAGATCAACAACTGGAT...AGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCTGCACGATCCAGTTGTaGATCTTGTCTCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPCTIQL*ILSRRR
Trigger: TCGCCGCCGAGACAAGATCAACAACTGGATCGTGCA...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCAGGCTATCTGCAGTTCTaGGGCCCAAAGCCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPGYLQF*GPKPLN
Trigger: ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCC...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCGGCTATCTGCAGTTCTaGGGCCCAAAGCCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPGYLQF*GPKPLN
Trigger: ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCC...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATCATCACAAAGAATaGACCCCCTGCCCCATCTCC +
Preference number: 5 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPHHHKE*TPCPIS
Trigger: GGAGATGGGGCAGGGGGTCAATTCTTTGTGATGATG...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368019.5
CDS-3UTR CAA 90 bp GTGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTTGCACGATCCAGTTGTaGATCTTGTCTCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: VGVGKAVSARPHCVFHTTCTIQL*ILSRRR
Trigger: TCGCCGCCGAGACAAGATCAACAACTGGATCGTGCA...AGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCAGTCTGGGATTATCTaGGAGAGCTGCACGATCCAG +
Preference number: 5 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPQSGII*ESCTIQ
Trigger: CTGGATCGTGCAGCTCTCCAAGATAATCCCAGACTG...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATTACTCTGGCCAGACTaGGTGCTCTCCATAGAGCAG +
Preference number: 5 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPLLWPD*VLSIEQ
Trigger: CTGCTCTATGGAGAGCACCAAGTCTGGCCAGAGTAA...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCAATTGTCCAGCTGCAGTaGGTCAAGTCCCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: AVAPGLSAVLGPKAPESPIVQLQ*VKSLQF
Trigger: GAACTGCAGGGACTTGACCAACTGCAGCTGGACAAT...TGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCTGTCGAAGCACGTCATaGTCCAGCTGCAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: HGIRLLLLGYLQFLGPKPCRSTS*SSCSWS
Trigger: TGACCAACTGCAGCTGGACAATGACGTGCTTCGACA...GGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CCCTGCGTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGACTTCGGGGAATAAGTGTCGAAGCACGTCATaGTCCAGCTGCAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: PCVSHPESSGELLTSGNKCRSTS*SSCSWS
Trigger: TGACCAACTGCAGCTGGACAATGACGTGCTTCGACA...CTTATTCCCCGAAGTCAGAAGCTCCCCGGACGACTCGGGATGAGAAACGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAGGCTATCTGCAGTTCTaGGGCCCAAAGCCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLGYLQF*GPKPLN
Trigger: ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCC...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GTGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGAGACAGCACATGCATaGTGCGAGAGGAGCACAAGG +
Preference number: 5 (lower is better)
Translates to: VGVGKAVSARPHCVFHTTETAHA*CERSTR
Trigger: CCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTC...AGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CTTCATTATGCTGAGCCCTGCGTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGCACCCTGTACATCACTaGACGTTGGGGTCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LHYAEPCVSHPESSGELLHPVHH*TLGSGK
Trigger: CTTCCCTGACCCCAACGTCAAGTGATGTACAGGGTG...CAGAAGCTCCCCGGACGACTCGGGATGAGAAACGCAGGGCTCAGCATAATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp CACCTGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTTGGTCAAGTCCCTGCAGTGCACGATCCAGTTGTaGATCTTGTCTCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: HLLSKHVIVQLQLVKSLQCTIQL*ILSRRR
Trigger: TCGCCGCCGAGACAAGATCAACAACTGGATCGTGCA...CTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCAGTCTGGGATTATCTaGGAGAGCTGCACGATCCAG +
Preference number: 5 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLQSGII*ESCTIQ
Trigger: CTGGATCGTGCAGCTCTCCAAGATAATCCCAGACTG...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp TGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGTGTCGAAGCACGTCATaGTCCAGCTGCAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: WGWARLSVHVHIVCFTPLCRSTS*SSCSWS
Trigger: TGACCAACTGCAGCTGGACAATGACGTGCTTCGACA...CAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp AGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTACAGTGCACGTCCACATaGTGTGTTTCACACCACTGC +
Preference number: 5 (lower is better)
Translates to: RPQLLTGQSPLHGHQPLLQCTST*CVSHHC
Trigger: GCAGTGGTGTGAAACACACAATGTGGACGTGCACTG...TAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GGGGCAGTGAAGGAAAGGGGCACGGGATTAGGCTGTTGCTCCTGGGCTATCTGCGGAACTGGTCCTTTTTaGGAGGTCTTTGTATCTCCT +
Preference number: 5 (lower is better)
Translates to: GAVKERGTGLGCCSWAICGTGPF*EVFVSP
Trigger: AGGAGATACAAAGACCTCCAAAAAAGGACCAGTTCC...GCAGATAGCCCAGGAGCAACAGCCTAATCCCGTGCCCCTTTCCTTCACTGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATGTTCGGAAGACGTACTaGACGTTGGGGTCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNVRKTY*TLGSGK
Trigger: CTTCCCTGACCCCAACGTCAAGTACGTCTTCCGAAC...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CACCTGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTTGGTCAAGTCCCTGCAGTTACTCTGGCCAGACTaGGTGCTCTCCATAGAGCAG +
Preference number: 5 (lower is better)
Translates to: HLLSKHVIVQLQLVKSLQLLWPD*VLSIEQ
Trigger: CTGCTCTATGGAGAGCACCAAGTCTGGCCAGAGTAA...CTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp CCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAAACATTGTCCAGCTGCAGTaGGTCAAGTCCCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: PQLLTGQSPLHGHQPLLNIVQLQ*VKSLQF
Trigger: GAACTGCAGGGACTTGACCAACTGCAGCTGGACAAT...GTTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CACCTGTTGTCGAAGCACGTCATTGTCCAGCTGCAGTTGGTCAAGTCCCTGCAGATTGTCCAGCTGCAGTaGGTCAAGTCCCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: HLLSKHVIVQLQLVKSLQIVQLQ*VKSLQF
Trigger: GAACTGCAGGGACTTGACCAACTGCAGCTGGACAAT...CTGCAGGGACTTGACCAACTGCAGCTGGACAATGACGTGCTTCGACAACAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp GGAGACAGCACATGCATTGTGCGAGAGGAGCACAAGGGCCCAGGGGCTGCATGGCGAAGCAGCAGATTCTaGTTTTTAAGATCTTCCACC +
Preference number: 5 (lower is better)
Translates to: GDSTCIVREEHKGPGAAWRSSRF*FLRSST
Trigger: GGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCG...CCATGCAGCCCCTGGGCCCTTGTGCTCCTCTCGCACAATGCATGTGCTGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCAGGCATCATCACAAAGAATaGACCAGTGCCAGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: GGQGCQCTSTLCVSHHCRHHHKE*TSARRG
Trigger: ACCCCTCCTGGCACTGGTCAATTCTTTGTGATGATG...CCTGCAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CTTCATTATGCTGAGCCCTGCGTTTCTCATCCCGAGTCGTCCGGGGAGCTTCTGCATCATCACAAAGAATaGACCAGTGCCAGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: LHYAEPCVSHPESSGELLHHHKE*TSARRG
Trigger: ACCCCTCCTGGCACTGGTCAATTCTTTGTGATGATG...CAGAAGCTCCCCGGACGACTCGGGATGAGAAACGCAGGGCTCAGCATAATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp CACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCAGCCACGGGATTAGGCTGTaGCTCCTGGGCTATCTGCAG +
Preference number: 5 (lower is better)
Translates to: HSKQAQDKPQSLVCPVSSHGIRL*LLGYLQ
Trigger: CTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG...GCTGGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CTCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATCACGGGATTAGGCTGTaGCTCCTGGGCTATCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQRCLHRPQLLTGQSPLHHGIRL*LLGYLQ
Trigger: CTGCAGATAGCCCAGGAGCAACAGCCTAATCCCGTG...ATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAAACCAGTGCACGTCCACATaGTGTGTTTCACACCACTGC +
Preference number: 5 (lower is better)
Translates to: PQLLTGQSPLHGHQPLLNQCTST*CVSHHC
Trigger: GCAGTGGTGTGAAACACACAATGTGGACGTGCACTG...GTTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCTAAACTCCTTCCCTCACTTCTaGTGTAAGCTTGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PQLLTGQSPLHGHQPLLNSFPHF*CKLAPL
Trigger: CAGGGGAGCAAGCTTACACAAGAAGTGAGGGAAGGA...GTTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS CCA 90 bp GCAGAATTCAGGCATCCTGCCCACTACCAGGGTCTTTCCATGACCTaGCCAGACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTG +
Preference number: 5 (lower is better)
Translates to: AEFRHPAHYQGLSMT*PDLVLSIEQSGIIL
Trigger: CAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTCTGGCCAGGTCATGGAAAGACCCTGGTAGTGGGCAGGATGCCTGAATTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496363.5
CDS-3UTR CAA 90 bp GCTGGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTACAGTCTGGGATTATCTaGGAGAGCTGCACGATCCAG +
Preference number: 5 (lower is better)
Translates to: AGHSKQAQDKPQSLVCPVQSGII*ESCTIQ
Trigger: CTGGATCGTGCAGCTCTCCAAGATAATCCCAGACTG...TACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GGGCACTCTAAGCAAGCACAGGACAAGCCCCAGAGTTTAGTGTGTCCAGTATCCTTACTCTGGCCAGACTaGGTGCTCTCCATAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GHSKQAQDKPQSLVCPVSLLWPD*VLSIEQ
Trigger: CTGCTCTATGGAGAGCACCAAGTCTGGCCAGAGTAA...GGATACTGGACACACTAAACTCTGGGGCTTGTCCTGTGCTTGCTTAGAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATTGTCGAAGCACGTCATaGTCCAGCTGCAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNCRSTS*SSCSWS
Trigger: TGACCAACTGCAGCTGGACAATGACGTGCTTCGACA...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTGCAGGAAGATCTTCCACCTGTaGTCGAAGCACGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: GGQGCQCTSTLCVSHHCRKIFHL*SKHVIV
Trigger: GACAATGACGTGCTTCGACAACAGGTGGAAGATCTT...CCTGCAGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp ATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGCACCAGCCACTGCAAGATCTTCCACCTGTaGTCGAAGCACGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: IGLSFSLANLLFMGTSHCKIFHL*SKHVIV
Trigger: GACAATGACGTGCTTCGACAACAGGTGGAAGATCTT...GCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATTCCTTCCCTCACTTCTaGTGTAAGCTTGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNSFPHF*CKLAPL
Trigger: CAGGGGAGCAAGCTTACACAAGAAGTGAGGGAAGGA...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCATGGAACTGGTCCTTTTTaGGAGGTCTTTGTATCTCCT +
Preference number: 5 (lower is better)
Translates to: LLLLGYLQFLGPKPLNPHGTGPF*EVFVSP
Trigger: AGGAGATACAAAGACCTCCAAAAAAGGACCAGTTCC...ATGGGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp TCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGATTGTCCAGCTGCAGTaGGTCAAGTCCCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: SRDVCIGLSFSLANLLFMIVQLQ*VKSLQF
Trigger: GAACTGCAGGGACTTGACCAACTGCAGCTGGACAAT...CATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp AGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCCCCGAAGCAGCAGATTCTaGTTTTTAAGATCTTCCACC +
Preference number: 5 (lower is better)
Translates to: RLLLLGYLQFLGPKPLNPRSSRF*FLRSST
Trigger: GGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCG...GGGATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATCATCATCACAAAGAATaGACCAGTGCCAGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNHHHKE*TSARRG
Trigger: ACCCCTCCTGGCACTGGTCAATTCTTTGTGATGATG...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp AGACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCTGCACGATCAGTCTGGGATTATCTaGGAGAGCTGCACGATCCAG +
Preference number: 5 (lower is better)
Translates to: RLGALHRAVWDYLGELHDQSGII*ESCTIQ
Trigger: CTGGATCGTGCAGCTCTCCAAGATAATCCCAGACTG...ATCGTGCAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp ATTAGGCTGTTGCTCCTGGGCTATCTGCAGTTCTTGGGCCCAAAGCCCCTGAATAAGATCTTCCACCTGTaGTCGAAGCACGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: IRLLLLGYLQFLGPKPLNKIFHL*SKHVIV
Trigger: GACAATGACGTGCTTCGACAACAGGTGGAAGATCTT...ATTCAGGGGCTTTGGGCCCAAGAACTGCAGATAGCCCAGGAGCAACAGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368019.5
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp GTGGGGGTGGGCAAGGCTGTCAGTGCACGTCCACATTGTGTGTTTCACACCACTCGAAGCAGCAGATTCTaGTTTTTAAGATCTTCCACC +
Preference number: 5 (lower is better)
Translates to: VGVGKAVSARPHCVFHTTRSSRF*FLRSST
Trigger: GGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCG...AGTGGTGTGAAACACACAATGTGGACGTGCACTGACAGCCTTGCCCACCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS TCA 90 bp GACTCACTGCCTGTCCAGGTCTTAATGATCACTAAGAGTCATGAGTaGAGGCTCACTGCCTACCAGTCATGTCCCACAGCCTATTCTAGC +
Preference number: 5 (lower is better)
Translates to: DSLPVQVLMITKSHE*RLTAYQSCPTAYSS
Trigger: GCTAGAATAGGCTGTGGGACATGACTGGTAGGCAGTGAGCCTTCACTCATGACTCTTAGTGATCATTAAGACCTGGACAGGCAGTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491629.5
CDS-3UTR CAA 90 bp TCCAGAGATGTCTGCATAGGCCTCAGCTTCTCACTGGCCAATCTCCTCTTCATGGGAACTGGTCCTTTTTaGGAGGTCTTTGTATCTCCT +
Preference number: 5 (lower is better)
Translates to: SRDVCIGLSFSLANLLFMGTGPF*EVFVSP
Trigger: AGGAGATACAAAGACCTCCAAAAAAGGACCAGTTCC...CATGAAGAGGAGATTGGCCAGTGAGAAGCTGAGGCCTATGCAGACATCTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368020.5
ENST00000368021.7
CDS-3UTR CAA 90 bp CTGCAGTTCTTCAGACAAGCGGTGGTTACTCTGCCGAAGCTCCTGGATATAATCAAGATCTTCCACCTGTaGTCGAAGCACGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: LQFFRQAVVTLPKLLDIIKIFHL*SKHVIV
Trigger: GACAATGACGTGCTTCGACAACAGGTGGAAGATCTT...GATTATATCCAGGAGCTTCGGCAGAGTAACCACCGCTTGTCTGAAGAACTGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp AGACTTGGTGCTCTCCATAGAGCAGTCTGGGATTATCTTGGAGAGCTGCACGATGGAACTGGTCCTTTTTaGGAGGTCTTTGTATCTCCT +
Preference number: 5 (lower is better)
Translates to: RLGALHRAVWDYLGELHDGTGPF*EVFVSP
Trigger: AGGAGATACAAAGACCTCCAAAAAAGGACCAGTTCC...ATCGTGCAGCTCTCCAAGATAATCCCAGACTGCTCTATGGAGAGCACCAAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS-3UTR CAA 90 bp CGAAGCAGCAGATTCTTGTTTTTAAGATCTTCCACCTGTTGTCGAAGCACGTCACGAAGCAGCAGATTCTaGTTTTTAAGATCTTCCACC +
Preference number: 5 (lower is better)
Translates to: RSSRFLFLRSSTCCRSTSRSSRF*FLRSST
Trigger: GGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCG...TGACGTGCTTCGACAACAGGTGGAAGATCTTAAAAACAAGAATCTGCTGCTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473969.6
CDS CCA 90 bp GGATTTCAGATACCCAGCTTGCTTTCCAAAAGTAGGTTCACACTTTaGACCTCATTTTCATCTAAGGAAGGTGGTATAATATCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GFQIPSLLSKSRFTL*TSFSSKEGGIISPR
Trigger: CCTGGGAGATATTATACCACCTTCCTTAGATGAAAATGAGGTCCAAAGTGTGAACCTACTTTTGGAAAGCAAGCTGGGTATCTGAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472217.1
CDS GCA 72 bp TCTCCCGGCCTAGGTATCTCCATAGACAGCTGCTCATaGGCACTTCCAGCCCGCGGCCATGTTGGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: SPGLGISIDSCS*ALPARGHVGEG
Trigger: CCCCTCACCAACATGGCCGCGGGCTGGAAGTGCGCATGAGCAGCTGTCTATGGAGATACCTAGGCCGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368021.7
CDS GCA 72 bp TCTCCCTCTCCCGGCCTAGGTATCTCCATAGACAGCTaGTCATGCGCACTTCCAGCCCGCGGCCATGTTGGT +
Preference number: 6 (lower is better)
Translates to: SPSPGLGISIDS*SCALPARGHVG
Trigger: ACCAACATGGCCGCGGGCTGGAAGTGCGCATGAGCAGCTGTCTATGGAGATACCTAGGCCGGGAGAGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368021.7
CDS GCA 72 bp GGCCTGAGTGCTAAGTCCGGCCAAGGCCGTCTCAGCTaGCGATTTTCTCCAACTGTGTTCTCCCTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: GLSAKSGQGRLS*RFSPTVFSLSR
Trigger: CCGGGAGAGGGAGAACACAGTTGGAGAAAATCGGCAGCTGAGACGGCCTTGGCCGGACTTAGCACTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368021.7
ENST00000473969.6
ENST00000496363.5
ENST00000529476.1
CDS CCA 72 bp AGGCATCCTGCCCACTACCAGGGTCTTTCCATGACCTaGCCAGACTTGGTGCTCTCCATAGAGCAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: RHPAHYQGLSMT*PDLVLSIEQSG
Trigger: CCCAGACTGCTCTATGGAGAGCACCAAGTCTGGCCAGGTCATGGAAAGACCCTGGTAGTGGGCAGGATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496363.5
CDS TCA 72 bp TTTTTGGAGGTCTTTGTATCTCCTGATTCACAGGCCTaGGTGCTAAGTCCGGCCAAGGCCGTCTCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: FLEVFVSPDSQA*VLSPAKAVSAA
Trigger: GGCAGCTGAGACGGCCTTGGCCGGACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368021.7
ENST00000473969.6
ENST00000491629.5
ENST00000496363.5
ENST00000529476.1
CDS TCA 72 bp CCTGTCCAGGTCTTAATGATCACTAAGAGTCATGAGTaGAGGCTCACTGCCTACCAGTCATGTCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: PVQVLMITKSHE*RLTAYQSCPTA
Trigger: GGCTGTGGGACATGACTGGTAGGCAGTGAGCCTTCACTCATGACTCTTAGTGATCATTAAGACCTGGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491629.5
CDS CCA 72 bp TACTCTGCCGAAGCTCCTGGATATAATCACAAGCTTTaGATAGAATCCCACCTGGCCAGACTTGGTGCTCTC +
Preference number: 6 (lower is better)
Translates to: YSAEAPGYNHKL*IESHLARLGAL
Trigger: GAGAGCACCAAGTCTGGCCAGGTGGGATTCTATCCAAAGCTTGTGATTATATCCAGGAGCTTCGGCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528768.5