RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UROC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000159650

Ensembl transcript IDs: ENST00000290868.7, ENST00000383579.3

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCGGAGTGCAGGGAGGGTGGGGACCAAGAACCCGGCTTGGTCCTaGAGAGGGCAGTGGCCTGCCCCTCTCCAATCCACCGACATGTGG +
Preference number: 1 (lower is better)
Translates to: MRSAGRVGTKNPAWS*RGQWPAPLQSTDMW
Trigger: CCACATGTCGGTGGATTGGAGAGGGGCAGGCCACTGCCCTCTCCAGGACCAAGCCGGGTTCTTGGTCCCCACCCTCCCTGCACTCCGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR CCA 90 bp TCCTGGAGAGGGCAGTGGCCTGCCCCTCTCCAATCCACCGACATGTaGGGTGTCTGGTTTTCTGTGGCCCTCAGAGGCCCACCCACAGAC +
Preference number: 1 (lower is better)
Translates to: SWRGQWPAPLQSTDM*GVWFSVALRGPPTD
Trigger: GTCTGTGGGTGGGCCTCTGAGGGCCACAGAAAACCAGACACCCCACATGTCGGTGGATTGGAGAGGGGCAGGCCACTGCCCTCTCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR TCA 90 bp ATGAGGCTGTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTaGGGATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGG +
Preference number: 1 (lower is better)
Translates to: MRLWWHPAQGTIRAT*GCARSAGSAGVQEG
Trigger: CCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCACAGCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR TCA 90 bp CGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTaGCAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAG +
Preference number: 1 (lower is better)
Translates to: RRAPGQAWDLALNGL*QPSGLPCKWHGCGQ
Trigger: CTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 90 bp TGTTCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATaGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTG +
Preference number: 1 (lower is better)
Translates to: CSPQGPRAGLGLGPK*TLTAFRAPMQVAWL
Trigger: CAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR TCA 90 bp CGGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTaGCCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAG +
Preference number: 1 (lower is better)
Translates to: RPARPTSPQCSTQLC*PFISWSILLPELLQ
Trigger: CTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR CCA 90 bp AGCAGATGGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTaGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTT +
Preference number: 1 (lower is better)
Translates to: SRWAADRQSCMEAGR*PGSRGCDHPSRREL
Trigger: AAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 90 bp TGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTaGACAGAGAGCTGCATGTCTCTGGGCCTCAGGGGGCTGTCTGTA +
Preference number: 1 (lower is better)
Translates to: WTLTAFRAPMQVAWL*TESCMSLGLRGLSV
Trigger: TACAGACAGCCCCCTGAGGCCCAGAGACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 90 bp CCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATaGTTGTGGACAGAGAGCTGCATGTCTCTGGGCCTCAGGGGGCTG +
Preference number: 1 (lower is better)
Translates to: PKWTLTAFRAPMQVA*LWTESCMSLGLRGL
Trigger: CAGCCCCCTGAGGCCCAGAGACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 90 bp TGGGCCAGGACTAGGCCAACAGTCCCTCCTAACAGCAAGGAAGGCTaGAGAATCAGGTGGTTTTATTTACCCTATATTGCTGCCCACACA +
Preference number: 1 (lower is better)
Translates to: WARTRPTVPPNSKEG*RIRWFYLPYIAAHT
Trigger: TGTGTGGGCAGCAATATAGGGTAAATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGTCCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR CCA 90 bp AGGCCAACAGTCCCTCCTAACAGCAAGGAAGGCTGGAGAATCAGGTaGTTTTATTTACCCTATATTGCTGCCCACACAAAACTAGGCTTT +
Preference number: 1 (lower is better)
Translates to: RPTVPPNSKEGWRIR*FYLPYIAAHTKLGF
Trigger: AAAGCCTAGTTTTGTGTGGGCAGCAATATAGGGTAAATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTTAGGAGGGACTGTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR-3UTR CCA 90 bp GGAGGGTGGGGACCAAGAACCCGGCTTGGTCCTGGAGAGGGCAGTGGCCTGCCCCCTCTCACGAGGCTCTaGACCCAGTCATTACCGGGC +
Preference number: 2 (lower is better)
Translates to: GGWGPRTRLGPGEGSGLPPLTRL*TQSLPG
Trigger: GCCCGGTAATGACTGGGTCCAGAGCCTCGTGAGAGG...GGGCAGGCCACTGCCCTCTCCAGGACCAAGCCGGGTTCTTGGTCCCCACCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR-3UTR CCA 90 bp ATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGGTGTGTGCCATGGCTaGGCAGGTGAGGATCGCCAG +
Preference number: 2 (lower is better)
Translates to: IIPAGESLTSVHRRAPGQGVCHG*AGEDRQ
Trigger: CTGGCGATCCTCACCTGCCCAGCCATGGCACACACC...CTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR TCA 90 bp GGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTACCATGGCTGGGCAGGTaGGGATCGCCAGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: GLPVPPAHSAAHSSVDPLPWLGR*GSPGRK
Trigger: CTTCCTCCCTGGCGATCCTCACCTGCCCAGCCATGG...TAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR CAA 90 bp CGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTaGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: RRELDQCSPQGPRAG*GLGPKWTLTAFRAP
Trigger: GGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR CCA 90 bp ATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGAAAATGAGGCTGTGGTaGCACCCTGCACAGGGCACC +
Preference number: 2 (lower is better)
Translates to: IIPAGESLTSVHRRAPGQKMRLW*HPAQGT
Trigger: GGTGCCCTGTGCAGGGTGCCACCACAGCCTCATTTT...CTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CAA 90 bp CCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTaGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACA +
Preference number: 2 (lower is better)
Translates to: PQGPRAGLGLGPKWT*TAFRAPMQVAWLWT
Trigger: TGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR GCA 90 bp GTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGAGAAGTGCAGGAAGGGTGTGTaGCATGGCTGGGCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: VVAPCTGHHKGHVRMCEKCRKGV*HGWAGE
Trigger: CTCACCTGCCCAGCCATGGCACACACCCTTCCTGCA...CTTCTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR CCA 90 bp TGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTGGTGTGTGCCATGGCTaGGCAGGTGAGGATCGCCAG +
Preference number: 2 (lower is better)
Translates to: WPGSRGCDHPSRRELDQCGVCHG*AGEDRQ
Trigger: CTGGCGATCCTCACCTGCCCAGCCATGGCACACACC...ACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CAA 90 bp CCGGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTaGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCA +
Preference number: 2 (lower is better)
Translates to: PACPSHQPTVQHTAL*TLYFLVYPPSRTPP
Trigger: TGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR-3UTR GCA 90 bp GGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACTGCAGGAAGGGTGTGTaGCATGGCTGGGCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: GARVQKLLAQTADGQQTDCRKGV*HGWAGE
Trigger: CTCACCTGCCCAGCCATGGCACACACCCTTCCTGCA...GTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR GCA 90 bp GGGCCAGGACTAGGCCAACAGTCCCTCCTAACAGCAAGGAAGGCTGGAGAATCAGAGAGGGCAGTGGCCTaGCCCTCTCCAATCCACCGA +
Preference number: 2 (lower is better)
Translates to: GPGLGQQSLLTARKAGESERAVA*PSPIHR
Trigger: TCGGTGGATTGGAGAGGGGCAGGCCACTGCCCTCTC...TGATTCTCCAGCCTTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGTCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR-3UTR TCA 90 bp AGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGAGTTCCATGGCTGGGCAGGTaGGGATCGCCAGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: RVQKLLAQTADGQQTDRVPWLGR*GSPGRK
Trigger: CTTCCTCCCTGGCGATCCTCACCTGCCCAGCCATGG...AACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR GCA 90 bp CCAGTAAGTGATCATTTATCCTTAGGGCAGACCCGGCCTGCCCGTCCCACCAGCCAGGTAGTGCGGGTGTaGAGGAAGGGTGTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: PVSDHLSLGQTRPARPTSQVVRV*RKGVCH
Trigger: ATGGCACACACCCTTCCTGCACACCCGCACTACCTG...GCTGGTGGGACGGGCAGGCCGGGTCTGCCCTAAGGATAAATGATCACTTACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR-3UTR CCA 90 bp AGGCTGGCAGGTGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCGGACTTGGCCCTAAATaGACTTTGACAGCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: RLAGGQEAEGVIIPAGESGLGPK*TLTAFR
Trigger: CCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC...GCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCACCTGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR TCA 90 bp TGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTACCATAAGGGCCACGTaGGGATGTGCGAGAAGTGCA +
Preference number: 2 (lower is better)
Translates to: WPGSRGCDHPSRRELDQCTIRAT*GCARSA
Trigger: TGCACTTCTCGCACATCCTCACGTGGCCCTTATGGT...ACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR TCA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCAGGGCTGTCTGTAAAATaGGGCTGTGGTGGCACCCTG +
Preference number: 2 (lower is better)
Translates to: PFISWSILLPELLQASSPGLSVK*GCGGTL
Trigger: CAGGGTGCCACCACAGCCTCATTTTACAGACAGCCC...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR TCA 90 bp GACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGGCTGTCTGTAAAATaGGGCTGTGGTGGCACCCTG +
Preference number: 2 (lower is better)
Translates to: DSLQGSHASGMVVDRELHGLSVK*GCGGTL
Trigger: CAGGGTGCCACCACAGCCTCATTTTACAGACAGCCC...ATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR CCA 90 bp GGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCAAGAGCTGCATGTCTCTaGGCCTCAGGGGGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: GLGPKWTLTAFRAPMQVARAACL*ASGGCL
Trigger: CAGACAGCCCCCTGAGGCCCAGAGACATGCAGCTCT...TGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR GCA 90 bp GGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCACAGGTAGTGCGGGTGTaGAGGAAGGGTGTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: GLGPKWTLTAFRAPMQVAQVVRV*RKGVCH
Trigger: ATGGCACACACCCTTCCTGCACACCCGCACTACCTG...TGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR CCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCCCCCGGGCAGGCTTaGGACTTGGCCCTAAATGGA +
Preference number: 2 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPAPGQA*DLALNG
Trigger: TCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGC...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR CCA 90 bp AGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGAGTTAAAATGAGGCTGTGGTaGCACCCTGCACAGGGCACC +
Preference number: 2 (lower is better)
Translates to: RVQKLLAQTADGQQTDRVKMRLW*HPAQGT
Trigger: GGTGCCCTGTGCAGGGTGCCACCACAGCCTCATTTT...AACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR GCA 90 bp AGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGAGTTCCTTCAGGGCTCCCATaGAAGTGGCATGGTTGTGGA +
Preference number: 2 (lower is better)
Translates to: RVQKLLAQTADGQQTDRVPSGLP*KWHGCG
Trigger: TCCACAACCATGCCACTTGCATGGGAGCCCTGAAGG...AACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR CAA 90 bp GGAGGGTGGGGACCAAGAACCCGGCTTGGTCCTGGAGAGGGCAGTGGCCTGCCCAGCAAAGGGTCCCCTTaGCTGTACCCCTCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: GGWGPRTRLGPGEGSGLPSKGSP*LYPSGC
Trigger: ACAGCCTGAGGGGTACAGCAAAGGGGACCCTTTGCT...GGGCAGGCCACTGCCCTCTCCAGGACCAAGCCGGGTTCTTGGTCCCCACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR CCA 72 bp GGGCAGTGGCCTGCCCCTCTCCAATCCACCGACATGTaGGGTGTCTGGTTTTCTGTGGCCCTCAGAGGCCCA +
Preference number: 3 (lower is better)
Translates to: GQWPAPLQSTDM*GVWFSVALRGP
Trigger: TGGGCCTCTGAGGGCCACAGAAAACCAGACACCCCACATGTCGGTGGATTGGAGAGGGGCAGGCCACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR-3UTR CAA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCAGGCCCCCGGGCAGGCTaGGGACTTGGCCCTAAATGG +
Preference number: 3 (lower is better)
Translates to: PFISWSILLPELLQASSPGPRAG*GLGPKW
Trigger: CCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCC...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR TCA 72 bp TGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTaGGGATGTGCGAGAAGTGCAGGTAGTGCGGGTGTG +
Preference number: 3 (lower is better)
Translates to: WWHPAQGTIRAT*GCARSAGSAGV
Trigger: CACACCCGCACTACCTGCACTTCTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR GCA 72 bp CGTGAGGATGTGCGAGAAGTGCAGGTAGTGCGGGTGTaGAGGAAGGGTGTGTGCCATGGCTGGGCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: REDVREVQVVRV*RKGVCHGWAGE
Trigger: CTCACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATCCTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 72 bp TCTGGGCCTCAGGGGGCTGTCTGTAAAATGAGGCTGTaGTGGCACCCTGCACAGGGCACCATAAGGGCCACG +
Preference number: 3 (lower is better)
Translates to: SGPQGAVCKMRL*WHPAQGTIRAT
Trigger: CGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCACAGCCTCATTTTACAGACAGCCCCCTGAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 72 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATaGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTG +
Preference number: 3 (lower is better)
Translates to: QGPRAGLGLGPK*TLTAFRAPMQV
Trigger: CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 72 bp GCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTaGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGG +
Preference number: 3 (lower is better)
Translates to: AADRQSCMEAGR*PGSRGCDHPSR
Trigger: CCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR TCA 72 bp CCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTaGCAGCCTTCAGGGCTCCCATGCAAGTGGCATGGT +
Preference number: 3 (lower is better)
Translates to: PGQAWDLALNGL*QPSGLPCKWHG
Trigger: ACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR CAA 90 bp CCCACAGTGCAGCACACAGCTCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTGGCCCCCGGGCAGGCTaGGGACTTGGCCCTAAATGG +
Preference number: 3 (lower is better)
Translates to: PTVQHTALLTLYFLVYPPGPRAG*GLGPKW
Trigger: CCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCC...AGGAGGATAGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR CCA 72 bp TGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATaGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: CQGPEVACTDSR*AADRQSCMEAG
Trigger: GCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR GCA 72 bp GCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTaGATGTCTCTGGGCCTCAGGGGGCTGTCTGTAAAA +
Preference number: 3 (lower is better)
Translates to: APMQVAWLWTES*MSLGLRGLSVK
Trigger: TTTTACAGACAGCCCCCTGAGGCCCAGAGACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 72 bp ACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATaGTTGTGGACAGAGAGCTGCATGTCTCTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: TLTAFRAPMQVA*LWTESCMSLGL
Trigger: GAGGCCCAGAGACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR-3UTR CAA 90 bp CCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTATTTCCTGGTCTATCCAGCAGACAGACAGAGTaGCATGGAGGCTGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: PAHSAAHSSVDPLFPGLSSRQTE*HGGWQV
Trigger: CACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCT...GGATAGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR TCA 72 bp CGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTaGCCCTTTATTTCCTGGTCTATCCTCCTTCCCGAA +
Preference number: 3 (lower is better)
Translates to: RPTSPQCSTQLC*PFISWSILLPE
Trigger: TTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR CCA 72 bp TCCAATCCACCGACATGTGGGGTGTCTGGTTTTCTGTaGCCCTCAGAGGCCCACCCACAGACTCTTTCTCAT +
Preference number: 3 (lower is better)
Translates to: SNPPTCGVSGFL*PSEAHPQTLSH
Trigger: ATGAGAAAGAGTCTGTGGGTGGGCCTCTGAGGGCCACAGAAAACCAGACACCCCACATGTCGGTGGATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR-3UTR CAA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCCAGGGTCCAGAAGTaGCTTGCACAGACAGCAGAT +
Preference number: 3 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPARVQK*LAQTAD
Trigger: ATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGC...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CCA 72 bp ACTAGGCCAACAGTCCCTCCTAACAGCAAGGAAGGCTaGAGAATCAGGTGGTTTTATTTACCCTATATTGCT +
Preference number: 3 (lower is better)
Translates to: TRPTVPPNSKEG*RIRWFYLPYIA
Trigger: AGCAATATAGGGTAAATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp ATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTCCACCAGCCGGTGCCTaGCGGCCTCCCGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: IPAGESLTSVHRRAPGQAPPAGA*RPPGSS
Trigger: GCTGGATCCGGGAGGCCGCCAGGCACCGGCTGGTGG...AGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCCCACCAGCCGGTGCCTaGCGGCCTCCCGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: ARSAGSAGVQEGCVPWLGPPAGA*RPPGSS
Trigger: GCTGGATCCGGGAGGCCGCCAGGCACCGGCTGGTGG...GCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGGGACCACCGGCGCCTTaGTCCTCCTGCAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGGPPAP*SSCRRW
Trigger: CCATCGCCTGCAGGAGGATCAAGGCGCCGGTGGTCC...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGAGGTGCCCCCAGGAGTaGCCTGGAGAAGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGRCPQE*PGEARG
Trigger: CCCTCGGGCTTCTCCAGGCCACTCCTGGGGGCACCT...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383579.3
CDS-3UTR TCA 90 bp ATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTCAGCCGGAGAGAGCTTaGCCAGTGTTCACCGCAGGG +
Preference number: 4 (lower is better)
Translates to: IPAGESLTSVHRRAPGQAQPERA*PVFTAG
Trigger: CCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTG...AGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp AGGCTGGCAGGTGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCGGGGGTCCCCCGATGTaGACACCCAGCGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: RLAGGQEAEGVIIPAGESGGPPM*TPSGKA
Trigger: GGCCTTTCCGCTGGGTGTGCACATCGGGGGACCCCC...GCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCACCTGCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCCCCACCACCAGCCGGTaGCTGGCGGCCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGPTTSR*LAASRI
Trigger: GATCCGGGAGGCCGCCAGGCACCGGCTGGTGGTGGG...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTAAGGGCAGACCCGGCCTaGCCGTCCCACCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: GLPVPPAHSAAHSSVDPLRADPA*PSHQPT
Trigger: TGTGGGCTGGTGGGACGGGCAGGCCGGGTCTGCCCT...TAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp ATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTGGAGGAGATGCGGAGTaGAGGGAGGGTGGGGACCAA +
Preference number: 4 (lower is better)
Translates to: IPAGESLTSVHRRAPGQAGGDAE*REGGDQ
Trigger: TTGGTCCCCACCCTCCCTGCACTCCGCATCTCCTCC...AGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCTGCTGGGGAGGAGATaGGGAGTGCAGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGLLGRR*GVQGGW
Trigger: CCACCCTCCCTGCACTCCGCATCTCCTCCCCAGCAG...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp ATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGAACCCGGCTTGGTCCTaGAGAGGGCAGTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: IIPAGESLTSVHRRAPGQNPAWS*RGQWPA
Trigger: GGCAGGCCACTGCCCTCTCCAGGACCAAGCCGGGTT...CTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAACTGCGGCCTTGGCCTaGGCCCCACTCATTCCGCCG +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWATAALA*APLIPP
Trigger: CGGCGGAATGAGTGGGGCTCAGGCCAAGGCCGCAGT...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GGAGGGTGGGGACCAAGAACCCGGCTTGGTCCTGGAGAGGGCAGTGGCCTGCCCGGTAGTAGCCGCCATTaGACGGGTTGTGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GGWGPRTRLGPGEGSGLPGSSRH*TGCGRM
Trigger: CATCCTGCCACAACCCGTTCAATGGCGGCTACTACC...GGGCAGGCCACTGCCCTCTCCAGGACCAAGCCGGGTTCTTGGTCCCCACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp GCTGTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGAGGGCCGAATCCCCCGTTaGTCACCTCACCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AVVAPCTGHHKGHVRMCEGRIPR*SPHPSP
Trigger: TGGGCTGGGGTGAGGTGATCAACGGGGGATTCGGCC...CTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp ATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGCCAGCTGAAGGACCCTaGGCCTCTGGATGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: IIPAGESLTSVHRRAPGQPAEGP*ASGCSG
Trigger: ACCGCTGCATCCAGAGGCTCAGGGTCCTTCAGCTGG...CTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383579.3
CDS-3UTR GCA 90 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCGCACCCCACGATGACTaGGGCCTTGGCCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QGPRAGLGLGPKWTLTAFAPHDD*GLGLSP
Trigger: GGGGCTCAGGCCAAGGCCGCAGTCATCGTGGGGTGC...GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGAGCTCCTGGGGAAACTaGGCCACGGCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGSSWGN*ATAGSR
Trigger: CCTGGATCCTGCCGTGGCCCAGTTTCCCCAGGAGCT...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGGGGCACTGCGGCTGCTaGGAAAGAGGCCAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGGHCGC*ERGQVG
Trigger: ACCCACTTGGCCTCTTTCCCAGCAGCCGCAGTGCCC...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp TCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGTGACCGCCAGGTCCTaGGGGTCCCCCGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: SPQGPRAGLGLGPKWTLTVTARS*GSPDVH
Trigger: GTGCACATCGGGGGACCCCCAGGACCTGGCGGTCAC...TGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGTACAGGATCCTTGCCTaGGAGCCCACCACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGYRILA*EPTTSR
Trigger: CCGGCTGGTGGTGGGCTCCCAGGCAAGGATCCTGTA...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCCCCCCAGGAGTGGCCTaGAGAAGCCCGAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QGPRAGLGLGPKWTLTAFPPGVA*RSPREP
Trigger: TGGCTCCCTCGGGCTTCTCCAGGCCACTCCTGGGGG...GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000383579.3
3UTR CAA 72 bp GAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTaGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EAEGVIIPAGES*TSVHRRAPGQA
Trigger: AGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCCTCGGCCAACCTGTTaGTGGCTGAGACTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGPRPTC*WLRLAS
Trigger: GGAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGG...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGCCCAGGGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGGACCACCGGCGCCTTaGTCCTCCTGCAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: SPGCQGPEVACTDSRWAAGPPAP*SSCRRW
Trigger: CCATCGCCTGCAGGAGGATCAAGGCGCCGGTGGTCC...TGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACCCTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCCTTCCCCCATCCCGGTaGCCTCTCACGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QGPRAGLGLGPKWTLTAFLPPSR*PLTRLW
Trigger: CCAGAGCCTCGTGAGAGGTCACCGGGATGGGGGAAG...GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCGGGGGTCCCCCGATGTaGACACCCAGCGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGGGPPM*TPSGKA
Trigger: GGCCTTTCCGCTGGGTGTGCACATCGGGGGACCCCC...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCACCCACCACCAGCCGGTaGCTGGCGGCCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: PFISWSILLPELLQASSPPTTSR*LAASRI
Trigger: GATCCGGGAGGCCGCCAGGCACCGGCTGGTGGTGGG...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp AGCCCAGGGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCACAGAGCTGCAGGGCCTaGTGGAGCACCCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SPGCQGPEVACTDSRWAAQSCRA*WSTRSS
Trigger: GGACGAGCGGGTGCTCCAGCAGGCCCTGCAGCTCTG...TGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACCCTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GAGGCTGTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCCTCCTGGGCAAACTCTaGGGCCAGCAGCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EAVVAPCTGHHKGHVRMCLLGKL*GQQLLD
Trigger: GTCCAGGAGCTGCTGGCCCCAGAGTTTGCCCAGGAG...GCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCACAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCAGCTGCAGGGCCTGCTaGAGCACCCGCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGSCRAC*STRSSS
Trigger: GGAGGACGAGCGGGTGCTCCAGCAGGCCCTGCAGCT...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCGCCCCCGGGCAGGCTTaGGACTTGGCCCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: ARSAGSAGVQEGCVPWLGAPGQA*DLALNG
Trigger: TCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGC...GCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp ATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGACCAAGAACCCGGCTTaGTCCTGGAGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IIPAGESLTSVHRRAPGQTKNPA*SWRGQW
Trigger: CCACTGCCCTCTCCAGGACCAAGCCGGGTTCTTGGT...CTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp GGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTACGCCGAGCCCAGAGGTaGCAAAGACCTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLPVPPAHSAAHSSVDPLRRAQR*QRPSQP
Trigger: TGGCTGGGAAGGTCTTTGTCACCTCTGGGCTCGGCG...TAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGCGCCGAGCCCAGAGGTaGCAAAGACCTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRRRAQR*QRPSQP
Trigger: TGGCTGGGAAGGTCTTTGTCACCTCTGGGCTCGGCG...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGATGGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTGGCCAGGAAGCCGATGCACCCCACGATaGCTGCGGCCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RWAADRQSCMEAGRWPGSRCTPR*LRPWPE
Trigger: CTCAGGCCAAGGCCGCAGTCATCGTGGGGTGCATCG...GCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGCCAGTTCGTCTGTaGCCGCCAGGTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGWPVRL*PPGPGG
Trigger: ACCCCCAGGACCTGGCGGTCACAGACGAACTGGCCA...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCGCGGCCCTTCTGGTCTaGGTACAGGATCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ARSAGSAGVQEGCVPWLGAALLV*VQDPCL
Trigger: CAGGCAAGGATCCTGTACTCAGACCAGAAGGGCCGC...GCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACACGCCCCCTCCGTTGTaGAGGGCGACCCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GARVQKLLAQTADGQQTDTPPPL*RATQVA
Trigger: AGCCACCTGGGTCGCCCTTCACAACGGAGGGGGCGT...GTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTGGCCTTCTGGTTCCCTaGCCAGCAGCGCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: QPSGLPCKWHGCGQRAACGLLVP*PAAPGH
Trigger: GTGGCCCGGCGCTGCTGGTCAGGGAACCAGAAGGCC...ACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp ATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTCCAGGGGTGCAAGGTTaGCAAAGCAGGAAAGGACAC +
Preference number: 4 (lower is better)
Translates to: IPAGESLTSVHRRAPGQAPGVQG*QSRKGH
Trigger: GTGTCCTTTCCTGCTTTGTCAACCTTGCACCCCTGG...AGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383579.3
CDS-3UTR GCA 90 bp GAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCGCACCCCACGATGACTaGGGCCTTGGCCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EAEGVIIPAGESLTSVHRAPHDD*GLGLSP
Trigger: GGGGCTCAGGCCAAGGCCGCAGTCATCGTGGGGTGC...GCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCTGCACAGCCATGTCTaGACAGAAGGCAGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGLHSHV*TEGRAV
Trigger: GACGGCTCTGCCTTCTGTGCAGACATGGCTGTGCAG...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGAGCTCCTGGGGAAACTaGGCCACGGCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRSSWGN*ATAGSR
Trigger: CCTGGATCCTGCCGTGGCCCAGTTTCCCCAGGAGCT...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGGGGCACTGCGGCTGCTaGGAAAGAGGCCAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRGHCGC*ERGQVG
Trigger: ACCCACTTGGCCTCTTTCCCAGCAGCCGCAGTGCCC...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GAGGCTGTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGCTTCCCTGAGCCTCTaGATGCAGCGGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: EAVVAPCTGHHKGHVRMCASLSL*MQRSKL
Trigger: CAGCTTGGACCGCTGCATCCAGAGGCTCAGGGAAGC...GCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCACAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp ATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTGTCGTGTCCAATTCGTaGACCAGGCGCTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: IPAGESLTSVHRRAPGQAVVSNS*TRRSQR
Trigger: TCTTTGGGAGCGCCTGGTCCACGAATTGGACACGAC...AGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGCTGCAGGGCCTGCTaGAGCACCCGCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GARVQKLLAQTADGQQTDSCRAC*STRSSS
Trigger: GGAGGACGAGCGGGTGCTCCAGCAGGCCCTGCAGCT...GTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTGTGTGCCATGGCTaGGCAGGTGAGGATCGCCAG +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWAGVCHG*AGEDRQ
Trigger: CTGGCGATCCTCACCTGCCCAGCCATGGCACACACC...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTGAGGATCGCCAGGGACTAGACATGTGTGACTaGGATGGAGGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RVCRKGVCHGWAGEDRQGLDMCD*DGGRGQ
Trigger: CTGGCCTCTGCCTCCATCTCAGTCACACATGTCTAG...TCCCTGGCGATCCTCACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTACTGCGGCCTTGGCCTaGGCCCCACTCATTCCGCCG +
Preference number: 4 (lower is better)
Translates to: QPSGLPCKWHGCGQRAACTAALA*APLIPP
Trigger: CGGCGGAATGAGTGGGGCTCAGGCCAAGGCCGCAGT...ACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp TCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACACCTCGGCCAACCTGTTaGTGGCTGAGACTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPQGPRAGLGLGPKWTLTPRPTC*WLRLAS
Trigger: GGAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGG...TGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CCAGTAAGTGATCATTTATCCTTAGGGCAGACCCGGCCTGCCCGTCCCACCAGCTGGCCAGTTCGTCTGTaGCCGCCAGGTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PVSDHLSLGQTRPARPTSWPVRL*PPGPGG
Trigger: ACCCCCAGGACCTGGCGGTCACAGACGAACTGGCCA...GCTGGTGGGACGGGCAGGCCGGGTCTGCCCTAAGGATAAATGATCACTTACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGACGCCCCCTCCGTTGTaGAGGGCGACCCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMTPPPL*RATQVA
Trigger: AGCCACCTGGGTCGCCCTTCACAACGGAGGGGGCGT...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCACAGCCAAGTCCTCGATaGCCAGGTACCGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWAQPSPR*PGTDVQ
Trigger: CTGCACGTCGGTACCTGGGCATCGAGGACTTGGCTG...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp TCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACACTCCACATCCGCTCCTaGTCTCTGGGCCTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SPQGPRAGLGLGPKWTLTLHIRS*SLGLQE
Trigger: CTCTTGGAGGCCCAGAGAGCAGGAGCGGATGTGGAG...TGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp ACCCTCATCTCGTGGGCCAGGACTAGGCCAACAGTCCCTCCTAACAGCAAGGAAGGTGATGACGAGCCGTaGGGCACTGCGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLISWARTRPTVPPNSKEGDDEP*GTAAAG
Trigger: CCCAGCAGCCGCAGTGCCCCACGGCTCGTCATCACC...TTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGTCCTGGCCCACGAGATGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGGTGATGACGAGCCGTaGGGCACTGCGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMGDDEP*GTAAAG
Trigger: CCCAGCAGCCGCAGTGCCCCACGGCTCGTCATCACC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GAGGCTGTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGCCACGCGGCCCTTCTaGTCTGAGTACAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: EAVVAPCTGHHKGHVRMCATRPF*SEYRIL
Trigger: AAGGATCCTGTACTCAGACCAGAAGGGCCGCGTGGC...GCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCACAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp ATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGCCCATGCAAGTGGCATaGTTGTGGACAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IIPAGESLTSVHRRAPGQPMQVA*LWTESC
Trigger: GCAGCTCTCTGTCCACAACCATGCCACTTGCATGGG...CTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp AGATGGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTGGCCAGGAAGCGCCCCCGGGCAGGCTTaGGACTTGGCCCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: RWAADRQSCMEAGRWPGSAPGQA*DLALNG
Trigger: TCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGC...GCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGACCGGGCTATGGGATTaGGGAAGGGGTGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRTGLWD*GRGARL
Trigger: GAGTCTGGCACCCCTTCCCCAATCCCATAGCCCGGT...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCACCCACCCTCATCTCGTaGGCCAGGACTAGGCCAACA +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWAPTLIS*ARTRPT
Trigger: TGTTGGCCTAGTCCTGGCCCACGAGATGAGGGTGGG...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGAGGACCCTGAGCCTCTaGATGCAGCGGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRRTLSL*MQRSKL
Trigger: CAGCTTGGACCGCTGCATCCAGAGGCTCAGGGTCCT...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383579.3
CDS-3UTR TCA 90 bp AGATGGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTGGCCAGGAAGCGCGGCCCTTCTGGTCTaGGTACAGGATCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RWAADRQSCMEAGRWPGSAALLV*VQDPCL
Trigger: CAGGCAAGGATCCTGTACTCAGACCAGAAGGGCCGC...GCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTCGGCCGAATCCCCCGTTaGTCACCTCACCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLQGSHASGMVVDRELHVGRIPR*SPHPSP
Trigger: TGGGCTGGGGTGAGGTGATCAACGGGGGATTCGGCC...GACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCATCGTCCTCCACCTTGTaGGGCAGTGTCACCACCAAG +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWASSSTL*GSVTTK
Trigger: CTTGGTGGTGACACTGCCTCACAAGGTGGAGGACGA...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATCCATGGCTGGGCAGGTaGGGATCGCCAGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DSLQGSHASGMVVDRELHPWLGR*GSPGRK
Trigger: CTTCCTCCCTGGCGATCCTCACCTGCCCAGCCATGG...ATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCGGGCTGTCTGTAAAATaGGGCTGTGGTGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: QGPRAGLGLGPKWTLTAFGLSVK*GCGGTL
Trigger: CAGGGTGCCACCACAGCCTCATTTTACAGACAGCCC...GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACCAGCCGGAGAGAGCTTaGCCAGTGTTCACCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GARVQKLLAQTADGQQTDQPERA*PVFTAG
Trigger: CCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTG...GTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp TCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACATCCATCAGCCAGCCCTaGCTGTGGCGTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SPQGPRAGLGLGPKWTLTSISQP*LWRFSR
Trigger: CCTTGAGAAACGCCACAGGCAGGGCTGGCTGATGGA...TGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTCCATCAGCCAGCCCTaGCTGTGGCGTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRSISQP*LWRFSR
Trigger: CCTTGAGAAACGCCACAGGCAGGGCTGGCTGATGGA...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp ATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTAAGGTGCTGTTCTCCTaGATGGTCTGGCAGATGATC +
Preference number: 4 (lower is better)
Translates to: IPAGESLTSVHRRAPGQAKVLFS*MVWQMI
Trigger: GATCATCTGCCAGACCATGCAGGAGAACAGCACCTT...AGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGGTGTCACCACCAAGGTaGTGTTCTCCTGCATGGTCT +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGVSPPR*CSPAWS
Trigger: AGACCATGCAGGAGAACAGCACCTTGGTGGTGACAC...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATTGGCTCCCTCAGAGCTaGAGGGCCTGCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: DSLQGSHASGMVVDRELHWLPQS*RACWST
Trigger: GGTGCTCCAGCAGGCCCTGCAGCTCTGAGGGAGCCA...ATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTCAGGTAGTGCGGGTGTaGAGGAAGGGTGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EVQVVRVCRKGVCHGWAGQVVRV*RKGVCH
Trigger: ATGGCACACACCCTTCCTGCACACCCGCACTACCTG...ACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGCAGGTAGTGCGGGTGTaGAGGAAGGGTGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRQVVRV*RKGVCH
Trigger: ATGGCACACACCCTTCCTGCACACCCGCACTACCTG...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp TGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTCTCCTGGGCAAACTCTaGGGCCAGCAGCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WPGSRGCDHPSRRELDQCLLGKL*GQQLLD
Trigger: GTCCAGGAGCTGCTGGCCCCAGAGTTTGCCCAGGAG...ACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GAGGCTGTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGCAGCCACTTTCGTCTaGCAGGGGTACTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: EAVVAPCTGHHKGHVRMCAATFV*QGYCSI
Trigger: GATTGAGCAGTACCCCTGCCAGACGAAAGTGGCTGC...GCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCACAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCAGTGACCGCCAGGTCCTaGGGGTCCCCCGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: GLGPKWTLTAFRAPMQVAVTARS*GSPDVH
Trigger: GTGCACATCGGGGGACCCCCAGGACCTGGCGGTCAC...TGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTGCCACGCGGCCCTTCTaGTCTGAGTACAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: EVQVVRVCRKGVCHGWAGATRPF*SEYRIL
Trigger: AAGGATCCTGTACTCAGACCAGAAGGGCCGCGTGGC...ACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCACTGCAGGCGATGGCCTaGTTAATGGCCACAGCGATG +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWALQAMA*LMATAM
Trigger: CATCGCTGTGGCCATTAACCAGGCCATCGCCTGCAG...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCAGAAGGGCGACCCAGGTaGCTCCGCGACAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: PFISWSILLPELLQASSPEGRPR*LRDRHL
Trigger: GAGATGCCTGTCGCGGAGCCACCTGGGTCGCCCTTC...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCACAGACAGAGTTGCATaGAGGCTGGCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QGPRAGLGLGPKWTLTAFTDRVA*RLAGGQ
Trigger: CTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGT...GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCGTCATTACCGGGCTATaGGATTGGGGAAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QGPRAGLGLGPKWTLTAFVITGL*DWGRGA
Trigger: GGCACCCCTTCCCCAATCCCATAGCCCGGTAATGAC...GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp AGATGGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTGGCCAGGAAGCCCTCTCACGAGGCTCTaGACCCAGTCATTACCGGGC +
Preference number: 4 (lower is better)
Translates to: RWAADRQSCMEAGRWPGSPLTRL*TQSLPG
Trigger: GCCCGGTAATGACTGGGTCCAGAGCCTCGTGAGAGG...GCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
3UTR CAA 72 bp CCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTaGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: PRAGLGLGPKWT*TAFRAPMQVAW
Trigger: CCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
3UTR CAA 72 bp CTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTaGGGACTTGGCCCTAAATGGACTTTGACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LDQCSPQGPRAG*GLGPKWTLTAF
Trigger: GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTCTAGACATGTGTGACTaGGATGGAGGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EVQVVRVCRKGVCHGWAGLDMCD*DGGRGQ
Trigger: CTGGCCTCTGCCTCCATCTCAGTCACACATGTCTAG...ACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp TCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAACTGAGCCCAGTTGCTaGACACCTGCCCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SPQGPRAGLGLGPKWTLTTEPSC*TPAHFL
Trigger: GAGGAAATGGGCAGGTGTTCAGCAACTGGGCTCAGT...TGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CGTGAGGATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCGCAGGATGTCTGATCTaGCCCCAGGTCCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: REDVREVQVVRVCRKGVCAGCLI*PQVHQA
Trigger: TGCTTGGTGGACCTGGGGTCAGATCAGACATCCTGC...GCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATCCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACCCTGGACCAGGTCCTTaGACACAGCAGGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GARVQKLLAQTADGQQTDPGPGP*TQQGWR
Trigger: CCTCCAACCCTGCTGTGTTCAAGGACCTGGTCCAGG...GTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATCCGCTCACGTCATGGTaGTCTCGGCTCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: DSLQGSHASGMVVDRELHPLTSW*SRLRTT
Trigger: GGTGGTCCTGAGCCGAGATCACCATGACGTGAGCGG...ATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGGCCTTCTGGTTCCCTaGCCAGCAGCGCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPGLLVP*PAAPGH
Trigger: GTGGCCCGGCGCTGCTGGTCAGGGAACCAGAAGGCC...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGATGTGTCCGTACAGTTaGAGCTCCTGGGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: VIIPAGESLTSVHRRAPGMCPYS*SSWANS
Trigger: AGAGTTTGCCCAGGAGCTGCAACTGTACGGACACAT...CCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGCCTTCAGGGCTCCCATaGAAGTGGCATGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRPSGLP*KWHGCG
Trigger: TCCACAACCATGCCACTTGCATGGGAGCCCTGAAGG...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGAGAGGGCAGTGGCCTaGCCCTCTCCAATCCACCGA +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMERAVA*PSPIHR
Trigger: TCGGTGGATTGGAGAGGGGCAGGCCACTGCCCTCTC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp GCCCAGGGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGGCAGCCACTTTCGTCTaGCAGGGGTACTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: AQGARVQKLLAQTADGQQAATFV*QGYCSI
Trigger: GATTGAGCAGTACCCCTGCCAGACGAAAGTGGCTGC...CTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTAGGGAAAGAGGCCAAGTaGGTGCCCACTGTACATGAC +
Preference number: 4 (lower is better)
Translates to: GLPVPPAHSAAHSSVDPLGKEAK*VPTVHD
Trigger: GTCATGTACAGTGGGCACCCACTTGGCCTCTTTCCC...TAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGAGGCCATGAGGCTCTaGGCCTCCGTGAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMEAMRL*ASVKLS
Trigger: GCTCAGCTTCACGGAGGCCCAGAGCCTCATGGCCTC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACTCCGCTCCTGCTCTCTaGGCCTCCAAGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GARVQKLLAQTADGQQTDSAPAL*ASKRKA
Trigger: TGCCTTCCTCTTGGAGGCCCAGAGAGCAGGAGCGGA...GTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GGGCCAGGACTAGGCCAACAGTCCCTCCTAACAGCAAGGAAGGCTGGAGAATCATACAGGATCCTTGCCTaGGAGCCCACCACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GPGLGQQSLLTARKAGESYRILA*EPTTSR
Trigger: CCGGCTGGTGGTGGGCTCCCAGGCAAGGATCCTGTA...TGATTCTCCAGCCTTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGTCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGGTGTGTGCCATGGCTaGGCAGGTGAGGATCGCCAG +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMGVCHG*AGEDRQ
Trigger: CTGGCGATCCTCACCTGCCCAGCCATGGCACACACC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp AGCCCAGGGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAAAAATGAGGCTGTGGTaGCACCCTGCACAGGGCACC +
Preference number: 4 (lower is better)
Translates to: SPGCQGPEVACTDSRWAAKMRLW*HPAQGT
Trigger: GGTGCCCTGTGCAGGGTGCCACCACAGCCTCATTTT...TGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGAGCTGCATGTCTCTaGGCCTCAGGGGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GARVQKLLAQTADGQQTDRAACL*ASGGCL
Trigger: CAGACAGCCCCCTGAGGCCCAGAGACATGCAGCTCT...GTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCAGTGAGCACAGTGCCATaGACGATTCCCTGGGGACCG +
Preference number: 4 (lower is better)
Translates to: PFISWSILLPELLQASSPVSTVP*TIPWGP
Trigger: CGGTCCCCAGGGAATCGTTCATGGCACTGTGCTCAC...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGATGGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTGGCCAGGAAGCCAACCTGTTGATGGCTaGGACTTGCCTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RWAADRQSCMEAGRWPGSQPVDG*DLPPQA
Trigger: AGCCTGAGGAGGCAAGTCTCAGCCATCAACAGGTTG...GCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTGCATGGTCTGGCAGATaGTCTCATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: EVQVVRVCRKGVCHGWAGAWSGR*SHRPSG
Trigger: ACCAGAAGGCCTATGAGATCATCTGCCAGACCATGC...ACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGATGGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTGGCCAGGAAGCACCATAAGGGCCACGTaGGGATGTGCGAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RWAADRQSCMEAGRWPGSTIRAT*GCARSA
Trigger: TGCACTTCTCGCACATCCTCACGTGGCCCTTATGGT...GCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCACCATAAGGGCCACGTaGGGATGTGCGAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGTIRAT*GCARSA
Trigger: TGCACTTCTCGCACATCCTCACGTGGCCCTTATGGT...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAAGCGGAACTCTGTCCTaGCAGCACCTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWASGTLS*QHLSSP
Trigger: TGGAGAAGAAAGGTGCTGGCAGGACAGAGTTCCGCT...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCACAGAGCTGCAGGGCCTaGTGGAGCACCCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPQSCRA*WSTRSS
Trigger: GGACGAGCGGGTGCTCCAGCAGGCCCTGCAGCTCTG...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp CCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGTGGCTCCCTCAGAGCTaGAGGGCCTGCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: PKWTLTAFRAPMQVAWLWWLPQS*RACWST
Trigger: GGTGCTCCAGCAGGCCCTGCAGCTCTGAGGGAGCCA...CCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATTGCAGGAAGGGTGTGTaGCATGGCTGGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: DSLQGSHASGMVVDRELHCRKGV*HGWAGE
Trigger: CTCACCTGCCCAGCCATGGCACACACCCTTCCTGCA...ATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTAGGTCCAGAAGTTGCTTaGACAGACAGCAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: GLPVPPAHSAAHSSVDPLGPEVA*TDSRWA
Trigger: TGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACC...TAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp CCAGTAAGTGATCATTTATCCTTAGGGCAGACCCGGCCTGCCCGTCCCACCAGCGCAAAGGGTCCCCTTTaGTGTACCCCTCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PVSDHLSLGQTRPARPTSAKGPL*CTPQAV
Trigger: CACAGCCTGAGGGGTACAGCAAAGGGGACCCTTTGC...GCTGGTGGGACGGGCAGGCCGGGTCTGCCCTAAGGATAAATGATCACTTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp TGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTCCAGAGCACAGCGCCTaGAGGCTAGACATGTGTGAC +
Preference number: 4 (lower is better)
Translates to: WPGSRGCDHPSRRELDQCPEHSA*RLDMCD
Trigger: GTCACACATGTCTAGCCTCCAGGCGCTGTGCTCTGG...ACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp AGCCCAGGGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGGGAAAGAGGCCAAGTaGGTGCCCACTGTACATGAC +
Preference number: 4 (lower is better)
Translates to: SPGCQGPEVACTDSRWAAGKEAK*VPTVHD
Trigger: GTCATGTACAGTGGGCACCCACTTGGCCTCTTTCCC...TGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACCCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GCCCAGGGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGCTCCTCAGGCTTTCCTaGACCAGGTCCTTGAACACA +
Preference number: 4 (lower is better)
Translates to: AQGARVQKLLAQTADGQQLLRLS*TRSLNT
Trigger: TGTGTTCAAGGACCTGGTCCAGGAAAGCCTGAGGAG...CTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGCTCCTCAGGCTTTCCTaGACCAGGTCCTTGAACACA +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRLLRLS*TRSLNT
Trigger: TGTGTTCAAGGACCTGGTCCAGGAAAGCCTGAGGAG...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp ACCCTCATCTCGTGGGCCAGGACTAGGCCAACAGTCCCTCCTAACAGCAAGGAATCCGCTCCTGCTCTCTaGGCCTCCAAGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TLISWARTRPTVPPNSKESAPAL*ASKRKA
Trigger: TGCCTTCCTCTTGGAGGCCCAGAGAGCAGGAGCGGA...TTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGTCCTGGCCCACGAGATGAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp CCCACAGACCCCACCCTCATCTCGTGGGCCAGGACTAGGCCAACAGTCCCTCCTAAAGGCCCAAATCCCTaGGAGAATATGTCCCCCATG +
Preference number: 4 (lower is better)
Translates to: PTDPTLISWARTRPTVPPKGPNP*ENMSPM
Trigger: CATGGGGGACATATTCTCCCAGGGATTTGGGCCTTT...AGGAGGGACTGTTGGCCTAGTCCTGGCCCACGAGATGAGGGTGGGGTCTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCATGCACAGACAGCAGATaGGCAGCAGACAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWACTDSR*AADRQS
Trigger: ACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCA...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCACGATGCACCCCACGATaGCTGCGGCCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPRCTPR*LRPWPE
Trigger: CTCAGGCCAAGGCCGCAGTCATCGTGGGGTGCATCG...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGCAGGATGTCTGATCTaGCCCCAGGTCCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMAGCLI*PQVHQA
Trigger: TGCTTGGTGGACCTGGGGTCAGATCAGACATCCTGC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCATTGTGGCAGGATGTCTaGTCTGACCCCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: PFISWSILLPELLQASSPLWQDV*SDPRST
Trigger: GGTGGACCTGGGGTCAGATCAGACATCCTGCCACAA...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACCAACCTGTTGATGGCTaGGACTTGCCTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GARVQKLLAQTADGQQTDQPVDG*DLPPQA
Trigger: AGCCTGAGGAGGCAAGTCTCAGCCATCAACAGGTTG...GTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGAGTTCCGCTCACGTCATGGTaGTCTCGGCTCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: RVQKLLAQTADGQQTDRVPLTSW*SRLRTT
Trigger: GGTGGTCCTGAGCCGAGATCACCATGACGTGAGCGG...AACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTCTCGTCCTCCACCTTGTaGGGCAGTGTCACCACCAAG +
Preference number: 4 (lower is better)
Translates to: SLQGSHASGMVVDRELHVSSSTL*GSVTTK
Trigger: CTTGGTGGTGACACTGCCTCACAAGGTGGAGGACGA...GACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCACCATGGCTGGGCAGGTaGGGATCGCCAGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPPWLGR*GSPGRK
Trigger: CTTCCTCCCTGGCGATCCTCACCTGCCCAGCCATGG...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGGGCTGTCTGTAAAATaGGGCTGTGGTGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMGLSVK*GCGGTL
Trigger: CAGGGTGCCACCACAGCCTCATTTTACAGACAGCCC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGAGAAGATGTGTCCGTACAGTTaGAGCTCCTGGGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: VVAPCTGHHKGHVRMCEKMCPYS*SSWANS
Trigger: AGAGTTTGCCCAGGAGCTGCAACTGTACGGACACAT...CTTCTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTAAGAGGCCAAGTGGGTaGCCACTGTACATGACCAAA +
Preference number: 4 (lower is better)
Translates to: EVQVVRVCRKGVCHGWAGKRPSG*PLYMTK
Trigger: TTTGGTCATGTACAGTGGGCACCCACTTGGCCTCTT...ACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp TCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGTAGCAGTAGCTACCTaGTGTCATCTGGCCGTACAT +
Preference number: 4 (lower is better)
Translates to: SPQGPRAGLGLGPKWTLTVAVAT*CHLAVH
Trigger: ATGTACGGCCAGATGACAGCAGGTAGCTACTGCTAC...TGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGCCCAGGTACCGACGTaGAGCATTCAACACGGTGAG +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMAQVPT*SIQHGE
Trigger: CTCACCGTGTTGAATGCTGCACGTCGGTACCTGGGC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGAGAAGCCAAGAGGAAGGCATTaGCGTAGTCCCAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VVAPCTGHHKGHVRMCEKPRGRH*RSPRRR
Trigger: TCTTCTTCTGGGACTACGGCAATGCCTTCCTCTTGG...CTTCTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCGTGTCACCACCAAGGTaGTGTTCTCCTGCATGGTCT +
Preference number: 4 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGVSPPR*CSPAWS
Trigger: AGACCATGCAGGAGAACAGCACCTTGGTGGTGACAC...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp AGATGGGCAGCAGACAGACAGAGTTGCATGGAGGCTGGCAGGTGGCCAGGAAGCCCAGGGTCCAGAAGTTaGTTGCACAGACAGCAGATG +
Preference number: 4 (lower is better)
Translates to: RWAADRQSCMEAGRWPGSPGSRS*LHRQQM
Trigger: CATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGG...GCTTCCTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCTGCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp ACCCTCATCTCGTGGGCCAGGACTAGGCCAACAGTCCCTCCTAACAGCAAGGAAAAAGGGGAGAATGGCTaGTGGGGAGGAGATGCGGAG +
Preference number: 4 (lower is better)
Translates to: TLISWARTRPTVPPNSKEKGENG*WGGDAE
Trigger: CTCCGCATCTCCTCCCCAGCAGCCATTCTCCCCTTT...TTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGTCCTGGCCCACGAGATGAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTCGACAAGTAGAACATaGTCAGCCAGAACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRSTSRT*SARTEP
Trigger: GGGCTCAGTTCTGGCTGACCATGTTCTACTTGTCGA...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp TGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTGTCGTGTCCAATTCGTaGACCAGGCGCTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: WPGSRGCDHPSRRELDQCVVSNS*TRRSQR
Trigger: TCTTTGGGAGCGCCTGGTCCACGAATTGGACACGAC...ACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCATCACTCCATCAGCAATaGCTTCCTCCAGCACAGATG +
Preference number: 4 (lower is better)
Translates to: REVQVVRVCRKGVCHGWASLHQQ*LPPAQM
Trigger: CATCTGTGCTGGAGGAAGCCATTGCTGATGGAGTGA...TGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp ACCCTCATCTCGTGGGCCAGGACTAGGCCAACAGTCCCTCCTAACAGCAAGGAAAAAATGAGGCTGTGGTaGCACCCTGCACAGGGCACC +
Preference number: 4 (lower is better)
Translates to: TLISWARTRPTVPPNSKEKMRLW*HPAQGT
Trigger: GGTGCCCTGTGCAGGGTGCCACCACAGCCTCATTTT...TTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGTCCTGGCCCACGAGATGAGGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp TGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTCCCATGCAAGTGGCATaGTTGTGGACAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WPGSRGCDHPSRRELDQCPMQVA*LWTESC
Trigger: GCAGCTCTCTGTCCACAACCATGCCACTTGCATGGG...ACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGACAGACAGAGTTGCATaGAGGCTGGCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMTDRVA*RLAGGQ
Trigger: CTGGCCACCTGCCAGCCTCCATGCAACTCTGTCTGT...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGAGAGCTGCATGTCTCTGGGCCTCAGGGGGCTGTCTGTAAAATGAGGCTGTGGACTGAGCCCAGTTGCTaGACACCTGCCCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: RELHVSGPQGAVCKMRLWTEPSC*TPAHFL
Trigger: GAGGAAATGGGCAGGTGTTCAGCAACTGGGCTCAGT...CCACAGCCTCATTTTACAGACAGCCCCCTGAGGCCCAGAGACATGCAGCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGTGCCCACTGTACATaGCCAAAGTCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSLQGSHASGMVVDRELHGAHCT*PKSAPL
Trigger: CAGAGGAGCAGACTTTGGTCATGTACAGTGGGCACC...ATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGAGTTCCTGGACCAGGTCCTTaGACACAGCAGGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RVQKLLAQTADGQQTDRVPGPGP*TQQGWR
Trigger: CCTCCAACCCTGCTGTGTTCAAGGACCTGGTCCAGG...AACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTGCCCTAAATGGACTTTaGCAGCCTTCAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QPSGLPCKWHGCGQRAACALNGL*QPSGLP
Trigger: TGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGC...ACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGCTTTATCCACCTCTaGTATCACACCGATGCACCC +
Preference number: 4 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGCFIHL*YHTDAP
Trigger: GGGTGCATCGGTGTGATAGCAGAGGTGGATAAAGCA...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp CCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGTGCAGGAAGGGTGTGTaGCATGGCTGGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PKWTLTAFRAPMQVAWLWCRKGV*HGWAGE
Trigger: CTCACCTGCCCAGCCATGGCACACACCCTTCCTGCA...CCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCACAAAAGCAGAACAGGTaGCCCCAGGAGTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLGPKWTLTAFRAPMQVAQKQNR*PQEWPG
Trigger: TCCAGGCCACTCCTGGGGGCACCTGTTCTGCTTTTG...TGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383579.3
CDS-3UTR CCA 90 bp CGTGAGGATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCTCGACAAGTAGAACATaGTCAGCCAGAACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: REDVREVQVVRVCRKGVCSTSRT*SARTEP
Trigger: GGGCTCAGTTCTGGCTGACCATGTTCTACTTGTCGA...GCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATCCTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCCTACCTGCTGTCATCTaGCCGTACATTGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: EAEGVIIPAGESLTSVHRLPAVI*PYIVTP
Trigger: GGGGGTTACAATGTACGGCCAGATGACAGCAGGTAG...GCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CGTGAGGATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCTCACTCCATCAGCAATaGCTTCCTCCAGCACAGATG +
Preference number: 4 (lower is better)
Translates to: REDVREVQVVRVCRKGVCSLHQQ*LPPAQM
Trigger: CATCTGTGCTGGAGGAAGCCATTGCTGATGGAGTGA...GCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATCCTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGAGAGCTGCATGTCTCTaGGCCTCAGGGGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PKWTLTAFRAPMQVAWLWRAACL*ASGGCL
Trigger: CAGACAGCCCCCTGAGGCCCAGAGACATGCAGCTCT...CCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp AGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTCGGGCTCCCATGCAAGTaGCATGGTTGTGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: SLQGSHASGMVVDRELHVGLPCK*HGCGQR
Trigger: TCTCTGTCCACAACCATGCCACTTGCATGGGAGCCC...GACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCGGACTTGGCCCTAAATaGACTTTGACAGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGGLGPK*TLTAFR
Trigger: CCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CTCATTTCTTCCCCAGTAAGTGATCATTTATCCTTAGGGCAGACCCGGCCTGCCGGAGTGCAGGGAGGGTaGGGACCAAGAACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LISSPVSDHLSLGQTRPAGVQGG*GPRTRL
Trigger: AAGCCGGGTTCTTGGTCCCCACCCTCCCTGCACTCC...GGCAGGCCGGGTCTGCCCTAAGGATAAATGATCACTTACTGGGGAAGAAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp AGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGAGTTTTGTGGCAGGATGTCTaGTCTGACCCCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RVQKLLAQTADGQQTDRVLWQDV*SDPRST
Trigger: GGTGGACCTGGGGTCAGATCAGACATCCTGCCACAA...AACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGGGTAGTAGCCGCCATTaGACGGGTTGTGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PKWTLTAFRAPMQVAWLWGSSRH*TGCGRM
Trigger: CATCCTGCCACAACCCGTTCAATGGCGGCTACTACC...CCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp AGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTCGCATGGTCTGGCAGATaGTCTCATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLQGSHASGMVVDRELHVAWSGR*SHRPSG
Trigger: ACCAGAAGGCCTATGAGATCATCTGCCAGACCATGC...GACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp GGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTATTGTTCATAATCATGTaGATGATGGCGGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: GLPVPPAHSAAHSSVDPLLFIIM*MMAAAT
Trigger: AGTGGCTGCCGCCATCATGCACATGATTATGAACAA...TAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCACAGCCAAGTCCTCGATaGCCAGGTACCGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPQPSPR*PGTDVQ
Trigger: CTGCACGTCGGTACCTGGGCATCGAGGACTTGGCTG...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCACTCCACATCCGCTCCTaGTCTCTGGGCCTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPLHIRS*SLGLQE
Trigger: CTCTTGGAGGCCCAGAGAGCAGGAGCGGATGTGGAG...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp CAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTAGCGGAACTCTGTCCTaGCAGCACCTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QPSGLPCKWHGCGQRAACSGTLS*QHLSSP
Trigger: TGGAGAAGAAAGGTGCTGGCAGGACAGAGTTCCGCT...ACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTCTCCCACGAAGTTCTaGACAGCCATGTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMSPTKF*TAMSAQ
Trigger: CTGTGCAGACATGGCTGTGCAGAACTTCGTGGGAGA...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp AGAGAGCTGCATGTCTCTGGGCCTCAGGGGGCTGTCTGTAAAATGAGGCTGTGGTCTCCCACGAAGTTCTaGACAGCCATGTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RELHVSGPQGAVCKMRLWSPTKF*TAMSAQ
Trigger: CTGTGCAGACATGGCTGTGCAGAACTTCGTGGGAGA...CCACAGCCTCATTTTACAGACAGCCCCCTGAGGCCCAGAGACATGCAGCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGGTCCAGAAGTTGCTTaGACAGACAGCAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMGPEVA*TDSRWA
Trigger: TGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTATTTCCTGGTCTATCCCCAGAGCACAGCGCCTaGAGGCTAGACATGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PAHSAAHSSVDPLFPGLSPEHSA*RLDMCD
Trigger: GTCACACATGTCTAGCCTCCAGGCGCTGTGCTCTGG...GGATAGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp TTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGTACAGTTGCAGCTCCTaGGCAAACTCTGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGLGPKWTLTAFRAPMQVYSCSS*ANSGAS
Trigger: GCTGGCCCCAGAGTTTGCCCAGGAGCTGCAACTGTA...CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCACTACCTGCTGTCATCTaGCCGTACATTGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: PFISWSILLPELLQASSPLPAVI*PYIVTP
Trigger: GGGGGTTACAATGTACGGCCAGATGACAGCAGGTAG...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp ATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGACTGCAGGCGATGGCCTaGTTAATGGCCACAGCGATG +
Preference number: 4 (lower is better)
Translates to: MDFDSLQGSHASGMVVDRLQAMA*LMATAM
Trigger: CATCGCTGTGGCCATTAACCAGGCCATCGCCTGCAG...TCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGTTTTCCTTGCTTCCCTaGGCCTCTGGATGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: PKWTLTAFRAPMQVAWLWFSLLP*ASGCSG
Trigger: ACCGCTGCATCCAGAGGCTCAGGGAAGCAAGGAAAA...CCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp AGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGACAGACAGAGTTGCCCTAAATGGACTTTaGCAGCCTTCAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RVQKLLAQTADGQQTDRVALNGL*QPSGLP
Trigger: TGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGC...AACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp GGCCTGCCCGTCCCACCAGCCCACAGTGCAGCACACAGCTCTGTTGACCCTTTATTCTTCCCCAGTAAGTaGTCATTTATCCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLPVPPAHSAAHSSVDPLFFPSK*SFILRA
Trigger: TGCCCTAAGGATAAATGATCACTTACTGGGGAAGAA...TAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGGCTGGTGGGACGGGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp GGGCCAGGACTAGGCCAACAGTCCCTCCTAACAGCAAGGAAGGCTGGAGAATCAAAGAGGCCAAGTGGGTaGCCACTGTACATGACCAAA +
Preference number: 4 (lower is better)
Translates to: GPGLGQQSLLTARKAGESKRPSG*PLYMTK
Trigger: TTTGGTCATGTACAGTGGGCACCCACTTGGCCTCTT...TGATTCTCCAGCCTTCCTTGCTGTTAGGAGGGACTGTTGGCCTAGTCCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCACTGCACAGCCATGTCTaGACAGAAGGCAGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPLHSHV*TEGRAV
Trigger: GACGGCTCTGCCTTCTGTGCAGACATGGCTGTGCAG...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGGGGCTCCCATGCAAGTaGCATGGTTGTGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: PKWTLTAFRAPMQVAWLWGLPCK*HGCGQR
Trigger: TCTCTGTCCACAACCATGCCACTTGCATGGGAGCCC...CCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGCAATCCACCGACATGTaGGGTGTCTGGTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMQSTDM*GVWFSV
Trigger: CACAGAAAACCAGACACCCCACATGTCGGTGGATTG...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTTTTCCTTGCTTCCCTaGAAGGACACAAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRFSLLP*KDTKAE
Trigger: TTCTGCTTTTGTGTCCTTCCAGGGAAGCAAGGAAAA...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383579.3
CDS-3UTR TCA 90 bp AGAGAGCTGCATGTCTCTGGGCCTCAGGGGGCTGTCTGTAAAATGAGGCTGTGGAGAATATGTCCCCCATaGTGTGCTGCACATAGGAAG +
Preference number: 4 (lower is better)
Translates to: RELHVSGPQGAVCKMRLWRICPP*CAAHRK
Trigger: CTTCCTATGTGCAGCACATCATGGGGGACATATTCT...CCACAGCCTCATTTTACAGACAGCCCCCTGAGGCCCAGAGACATGCAGCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR TCA 90 bp CCCACAGACCCCACCCTCATCTCGTGGGCCAGGACTAGGCCAACAGTCCCTCCTTTTCTCTGTTTAGGATaGGTTATCTGTTGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PTDPTLISWARTRPTVPPFLCLG*VICWSV
Trigger: AACAGACCAACAGATAACTCATCCTAAACAGAGAAA...AGGAGGGACTGTTGGCCTAGTCCTGGCCCACGAGATGAGGGTGGGGTCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp TTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGCCAGGGTCCAGAAGTTaGTTGCACAGACAGCAGATG +
Preference number: 4 (lower is better)
Translates to: LGLGPKWTLTAFRAPMQVPGSRS*LHRQQM
Trigger: CATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGG...CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp TTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGTGCACAGACAGCAGATaGGCAGCAGACAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: LGLGPKWTLTAFRAPMQVCTDSR*AADRQS
Trigger: ACTCTGTCTGTCTGCTGCCCATCTGCTGTCTGTGCA...CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp TTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGACATGTGGGGTGTCTaGTTTTCTGTGGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LGLGPKWTLTAFRAPMQVDMWGV*FSVALR
Trigger: TCTGAGGGCCACAGAAAACCAGACACCCCACATGTC...CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp GGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCAAGCACACAGCTCTGTTaGCCCTTTATTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GLGPKWTLTAFRAPMQVASTQLC*PFISWS
Trigger: AGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCT...TGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTTGTTCATAATCATGTaGATGATGGCGGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMLFIIM*MMAAAT
Trigger: AGTGGCTGCCGCCATCATGCACATGATTATGAACAA...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp TTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGTAGCAGTAGCTACCTaGTGTCATCTGGCCGTACAT +
Preference number: 4 (lower is better)
Translates to: LGLGPKWTLTAFRAPMQVVAVAT*CHLAVH
Trigger: ATGTACGGCCAGATGACAGCAGGTAGCTACTGCTAC...CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp ATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAAAGGTGCTGTTCTCCTaGATGGTCTGGCAGATGATC +
Preference number: 4 (lower is better)
Translates to: MDFDSLQGSHASGMVVDRKVLFS*MVWQMI
Trigger: GATCATCTGCCAGACCATGCAGGAGAACAGCACCTT...TCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp TTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGAAAGGCCCAAATCCCTaGGAGAATATGTCCCCCATG +
Preference number: 4 (lower is better)
Translates to: LGLGPKWTLTAFRAPMQVKGPNP*ENMSPM
Trigger: CATGGGGGACATATTCTCCCAGGGATTTGGGCCTTT...CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CCTAACAGCAAGGAAGGCTGGAGAATCAGGTGGTTTTATTTACCCTATATTGCTGAAGGGCGACCCAGGTaGCTCCGCGACAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: PNSKEGWRIRWFYLPYIAEGRPR*LRDRHL
Trigger: GAGATGCCTGTCGCGGAGCCACCTGGGTCGCCCTTC...AGCAATATAGGGTAAATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp ATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGGACTTGGCCCTAAATaGACTTTGACAGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MDFDSLQGSHASGMVVDRGLGPK*TLTAFR
Trigger: CCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC...TCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp CTCATTTCTTCCCCAGTAAGTGATCATTTATCCTTAGGGCAGACCCGGCCTGCCCCAAGAGGAAGGCATTaGCGTAGTCCCAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LISSPVSDHLSLGQTRPAPRGRH*RSPRRR
Trigger: TCTTCTTCTGGGACTACGGCAATGCCTTCCTCTTGG...GGCAGGCCGGGTCTGCCCTAAGGATAAATGATCACTTACTGGGGAAGAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp GGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCAATGTTGTCCATGTACTaGAGCTTCACAGACACCTTC +
Preference number: 4 (lower is better)
Translates to: GLGPKWTLTAFRAPMQVAMLSMY*SFTDTF
Trigger: GAAGGTGTCTGTGAAGCTGCAGTACATGGACAACAT...TGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CCA 90 bp CCTAACAGCAAGGAAGGCTGGAGAATCAGGTGGTTTTATTTACCCTATATTGCTGAGGCCATGAGGCTCTaGGCCTCCGTGAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PNSKEGWRIRWFYLPYIAEAMRL*ASVKLS
Trigger: GCTCAGCTTCACGGAGGCCCAGAGCCTCATGGCCTC...AGCAATATAGGGTAAATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR TCA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAAGAATATGTCCCCCATaGTGTGCTGCACATAGGAAG +
Preference number: 4 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPRICPP*CAAHRK
Trigger: CTTCCTATGTGCAGCACATCATGGGGGACATATTCT...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp TTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGTACATGACCAAAGTCTaGTCCTCTGTCATCTTCGAC +
Preference number: 4 (lower is better)
Translates to: LGLGPKWTLTAFRAPMQVYMTKV*SSVIFD
Trigger: GTCGAAGATGACAGAGGAGCAGACTTTGGTCATGTA...CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR GCA 90 bp CCTAACAGCAAGGAAGGCTGGAGAATCAGGTGGTTTTATTTACCCTATATTGCTGCCCAGGTACCGACGTaGAGCATTCAACACGGTGAG +
Preference number: 4 (lower is better)
Translates to: PNSKEGWRIRWFYLPYIAAQVPT*SIQHGE
Trigger: CTCACCGTGTTGAATGCTGCACGTCGGTACCTGGGC...AGCAATATAGGGTAAATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp CCCACAGTGCAGCACACAGCTCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTATGTTGTCCATGTACTaGAGCTTCACAGACACCTTC +
Preference number: 4 (lower is better)
Translates to: PTVQHTALLTLYFLVYPPMLSMY*SFTDTF
Trigger: GAAGGTGTCTGTGAAGCTGCAGTACATGGACAACAT...AGGAGGATAGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCATTATTTACCCTATATTaGTGCCCACACAAAACTAGG +
Preference number: 4 (lower is better)
Translates to: PFISWSILLPELLQASSPLFTLY*CPHKTR
Trigger: CCTAGTTTTGTGTGGGCAGCAATATAGGGTAAATAA...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp ATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGGCTGGAGAATCAGGTaGTTTTATTTACCCTATATT +
Preference number: 4 (lower is better)
Translates to: MDFDSLQGSHASGMVVDRGWRIR*FYLPYI
Trigger: AATATAGGGTAAATAAAACCACCTGATTCTCCAGCC...TCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR GCA 90 bp CCTAACAGCAAGGAAGGCTGGAGAATCAGGTGGTTTTATTTACCCTATATTGCTTGCTTTATCCACCTCTaGTATCACACCGATGCACCC +
Preference number: 4 (lower is better)
Translates to: PNSKEGWRIRWFYLPYIACFIHL*YHTDAP
Trigger: GGGTGCATCGGTGTGATAGCAGAGGTGGATAAAGCA...AGCAATATAGGGTAAATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CCA 90 bp CCTAACAGCAAGGAAGGCTGGAGAATCAGGTGGTTTTATTTACCCTATATTGCTAACAGCAAGGAAGGCTaGAGAATCAGGTGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: PNSKEGWRIRWFYLPYIANSKEG*RIRWFY
Trigger: ATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTT...AGCAATATAGGGTAAATAAAACCACCTGATTCTCCAGCCTTCCTTGCTGTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS CCA 90 bp CGGCTCAGGACCACCGGCGCCTTGATCCTCCTGCAGGCGATGGCCTaGTTAATGGCCACAGCGATGGCCACGCGGCCCTTCTGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: RLRTTGALILLQAMA*LMATAMATRPFWSE
Trigger: CTCAGACCAGAAGGGCCGCGTGGCCATCGCTGTGGCCATTAACCAGGCCATCGCCTGCAGGAGGATCAAGGCGCCGGTGGTCCTGAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CCA 90 bp CCTCACCCCAGCCCACGCCCCCTCCGTTGTGAAGGGCGACCCAGGTaGCTCCGCGACAGGCATCTCCCACGAAGTTCTGCACAGCCATGT +
Preference number: 5 (lower is better)
Translates to: PHPSPRPLRCEGRPR*LRDRHLPRSSAQPC
Trigger: ACATGGCTGTGCAGAACTTCGTGGGAGATGCCTGTCGCGGAGCCACCTGGGTCGCCCTTCACAACGGAGGGGGCGTGGGCTGGGGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS TCA 90 bp GGCCTGGTTAATGGCCACAGCGATGGCCACGCGGCCCTTCTGGTCTaGGTACAGGATCCTTGCCTGGGAGCCCACCACCAGCCGGTGCCT +
Preference number: 5 (lower is better)
Translates to: GLVNGHSDGHAALLV*VQDPCLGAHHQPVP
Trigger: AGGCACCGGCTGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAGACCAGAAGGGCCGCGTGGCCATCGCTGTGGCCATTAACCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CCA 90 bp GCGATGGCCTGGTTAATGGCCACAGCGATGGCCACGCGGCCCTTCTaGTCTGAGTACAGGATCCTTGCCTGGGAGCCCACCACCAGCCGG +
Preference number: 5 (lower is better)
Translates to: AMAWLMATAMATRPF*SEYRILAWEPTTSR
Trigger: CCGGCTGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAGACCAGAAGGGCCGCGTGGCCATCGCTGTGGCCATTAACCAGGCCATCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp TCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGGCCCCCGGGCAGGCTaGGGACTTGGCCCTAAATGG +
Preference number: 5 (lower is better)
Translates to: SPQGPRAGLGLGPKWTLTGPRAG*GLGPKW
Trigger: CCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCC...TGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GGAGGGTGGGGACCAAGAACCCGGCTTGGTCCTGGAGAGGGCAGTGGCCTGCCCAGCAGACAGACAGAGTaGCATGGAGGCTGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GGWGPRTRLGPGEGSGLPSRQTE*HGGWQV
Trigger: CACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCT...GGGCAGGCCACTGCCCTCTCCAGGACCAAGCCGGGTTCTTGGTCCCCACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS TCA 90 bp TTGGAGGTCTCCCTAAAGGGGCTGTCGGTGCCGCTCACGTCATGGTaGTCTCGGCTCAGGACCACCGGCGCCTTGATCCTCCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LEVSLKGLSVPLTSW*SRLRTTGALILLQA
Trigger: CGCCTGCAGGAGGATCAAGGCGCCGGTGGTCCTGAGCCGAGATCACCATGACGTGAGCGGCACCGACAGCCCCTTTAGGGAGACCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CCA 90 bp TCCTCCAGCACAGATGTGGCCAGTTCGTCTGTGACCGCCAGGTCCTaGGGGTCCCCCGATGTGCACACCCAGCGGAAAGGCCCAAATCCC +
Preference number: 5 (lower is better)
Translates to: SSSTDVASSSVTARS*GSPDVHTQRKGPNP
Trigger: GGGATTTGGGCCTTTCCGCTGGGTGTGCACATCGGGGGACCCCCAGGACCTGGCGGTCACAGACGAACTGGCCACATCTGTGCTGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGAGAAGAGGACCACCGGCGCCTaGATCCTCCTGCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: VVAPCTGHHKGHVRMCEKRTTGA*ILLQAM
Trigger: CATCGCCTGCAGGAGGATCAAGGCGCCGGTGGTCCT...CTTCTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTCGCCGGGCCACACCATaGGAGACATCCCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: EVQVVRVCRKGVCHGWAGRRATP*ETSQLS
Trigger: GCTCAGCTGGGATGTCTCCAATGGTGTGGCCCGGCG...ACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGAGAAGCGCCGGGCCACACCATaGGAGACATCCCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: VVAPCTGHHKGHVRMCEKRRATP*ETSQLS
Trigger: GCTCAGCTGGGATGTCTCCAATGGTGTGGCCCGGCG...CTTCTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS TCA 90 bp GGGCTGCTTTATCCACCTCTGCTATCACACCGATGCACCCCACGATaGCTGCGGCCTTGGCCTGAGCCCCACTCATTCCGCCGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: GLLYPPLLSHRCTPR*LRPWPEPHSFRRAQ
Trigger: CTGGGCTCGGCGGAATGAGTGGGGCTCAGGCCAAGGCCGCAGTCATCGTGGGGTGCATCGGTGTGATAGCAGAGGTGGATAAAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS TCA 90 bp CATCAGCAATGGCTTCCTCCAGCACAGATGTGGCCAGTTCGTCTGTaGCCGCCAGGTCCTGGGGGTCCCCCGATGTGCACACCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: HQQWLPPAQMWPVRL*PPGPGGPPMCTPSG
Trigger: TCCGCTGGGTGTGCACATCGGGGGACCCCCAGGACCTGGCGGTCACAGACGAACTGGCCACATCTGTGCTGGAGGAAGCCATTGCTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp ATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGGCTCGGATCCAGCGGATGTaGTCCATGTACTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: IPAGESLTSVHRRAPGQARIQRM*SMYCSF
Trigger: GAAGCTGCAGTACATGGACAACATCCGCTGGATCCG...AGCCTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTGAGGATCGCCAGGGAGGCCCTAAATGGACTTaGACAGCCTTCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: RVCRKGVCHGWAGEDRQGGPKWT*TAFRAP
Trigger: GGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCC...TCCCTGGCGATCCTCACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp ATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGGCCCCCGGGCAGAGCAAAGGGTCCCCTTaGCTGTACCCCTCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: IIPAGESLTSVHRRAPGQSKGSP*LYPSGC
Trigger: ACAGCCTGAGGGGTACAGCAAAGGGGACCCTTTGCT...CTGCCCGGGGGCCCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CAA 90 bp GCCCAGGGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCAGGACCAAGAACCCGGCTaGGTCCTGGAGAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: AQGARVQKLLAQTADGQQDQEPG*VLERAV
Trigger: CACTGCCCTCTCCAGGACCAAGCCGGGTTCTTGGTC...CTGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CAA 90 bp AGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGGGCCCAGCCCAGGGCTaGTTGCAATCCCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RSAGSAGVQEGCVPWLGRGPAQG*LQSQLK
Trigger: CTTCAGCTGGGATTGCAACAAGCCCTGGGCTGGGCC...CCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383579.3
CDS GCA 90 bp TGCTTTATCCACCTCTGCTATCACACCGATGCACCCCACGATGACTaGGGCCTTGGCCTGAGCCCCACTCATTCCGCCGAGCCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: CFIHLCYHTDAPHDD*GLGLSPTHSAEPRG
Trigger: ACCTCTGGGCTCGGCGGAATGAGTGGGGCTCAGGCCAAGGCCGCAGTCATCGTGGGGTGCATCGGTGTGATAGCAGAGGTGGATAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCTCCTCGGCCAACCTGTaGATGGCTGAGACTTGCCTC +
Preference number: 5 (lower is better)
Translates to: QGPRAGLGLGPKWTLTAFSSANL*MAETCL
Trigger: GAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGGA...GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CGTGAGGATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCTGAGTACAGGATCCTaGCCTGGGAGCCCACCACCA +
Preference number: 5 (lower is better)
Translates to: REDVREVQVVRVCRKGVCLSTGS*PGSPPP
Trigger: TGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAG...GCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATCCTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp TGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTCCAGCCGGAGAGAGCTaGACCAGTGTTCACCGCAGG +
Preference number: 5 (lower is better)
Translates to: WPGSRGCDHPSRRELDQCPAGES*TSVHRR
Trigger: CCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGG...ACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS GCA 90 bp CGGTGCCTGGCGGCCTCCCGGATCCAGCGGATGTTGTCCATGTACTaGAGCTTCACAGACACCTTCACTCCATCAGCAATGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RCLAASRIQRMLSMY*SFTDTFTPSAMASS
Trigger: GGAGGAAGCCATTGCTGATGGAGTGAAGGTGTCTGTGAAGCTGCAGTACATGGACAACATCCGCTGGATCCGGGAGGCCGCCAGGCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GCTGTGGTGGCACCCTGCACAGGGCACCATAAGGGCCACGTGAGGATGTGCGAGATGCAAGTGGCATGGTaGTGGACAGAGAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: AVVAPCTGHHKGHVRMCEMQVAW*WTESCM
Trigger: CATGCAGCTCTCTGTCCACAACCATGCCACTTGCAT...CTCGCACATCCTCACGTGGCCCTTATGGTGCCCTGTGCAGGGTGCCACCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CGTGAGGATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCGGCCCTAAATGGACTTaGACAGCCTTCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: REDVREVQVVRVCRKGVCGPKWT*TAFRAP
Trigger: GGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCC...GCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATCCTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAGCAGCCCACCAGCCGGAGAGAGCTaGACCAGTGTTCACCGCAGG +
Preference number: 5 (lower is better)
Translates to: PFISWSILLPELLQASSPPAGES*TSVHRR
Trigger: CCTGCGGTGAACACTGGTCAAGCTCTCTCCGGCTGG...TGGGCTGCTGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CGGGTGTGCAGGAAGGGTGTGTGCCATGGCTGGGCAGGTGAGGATCGCCAGGGAACGGCAGGATCCAGGTaGTTCATAATCATGTGCATG +
Preference number: 5 (lower is better)
Translates to: RVCRKGVCHGWAGEDRQGTAGSR*FIIMCM
Trigger: CATGCACATGATTATGAACAACCTGGATCCTGCCGT...TCCCTGGCGATCCTCACCTGCCCAGCCATGGCACACACCCTTCCTGCACACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp TGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTGGAATGACCATCCCATaGGTGATGACGAGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: WPGSRGCDHPSRRELDQCGMTIP*VMTSRG
Trigger: CCCACGGCTCGTCATCACCAATGGGATGGTCATTCC...ACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp AGCCCAGGGTGCCAGGGTCCAGAAGTTGCTTGCACAGACAGCAGATGGGCAGCACGGATCCAGCGGATGTaGTCCATGTACTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SPGCQGPEVACTDSRWAARIQRM*SMYCSF
Trigger: GAAGCTGCAGTACATGGACAACATCCGCTGGATCCG...TGCTGCCCATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGCACCCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCATGCAAGTGGCATGGTaGTGGACAGAGAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: QGPRAGLGLGPKWTLTAFMQVAW*WTESCM
Trigger: CATGCAGCTCTCTGTCCACAACCATGCCACTTGCAT...GAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GATGTGCGAGAAGTGCAGGTAGTGCGGGTGTGCAGGAAGGGTGTGTGCCATGGCGCCAGGGTCCAGAAGTaGCTTGCACAGACAGCAGAT +
Preference number: 5 (lower is better)
Translates to: DVREVQVVRVCRKGVCHGARVQK*LAQTAD
Trigger: ATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGC...GCCATGGCACACACCCTTCCTGCACACCCGCACTACCTGCACTTCTCGCACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CCA 90 bp CAGCGGTCCAAGCTGTCAGTCACTTCCATCAGCCAGCCCTGCCTGTaGCGTTTCTCAAGGGCTGCTTTATCCACCTCTGCTATCACACCG +
Preference number: 5 (lower is better)
Translates to: QRSKLSVTSISQPCL*RFSRAALSTSAITP
Trigger: CGGTGTGATAGCAGAGGTGGATAAAGCAGCCCTTGAGAAACGCCACAGGCAGGGCTGGCTGATGGAAGTGACTGACAGCTTGGACCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCACTGAGTACAGGATCCTaGCCTGGGAGCCCACCACCA +
Preference number: 5 (lower is better)
Translates to: GLGPKWTLTAFRAPMQVALSTGS*PGSPPP
Trigger: TGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAG...TGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp TCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTTCCCGAACTCCTCCAGGCCAAGGACCACCGGCGCCTaGATCCTCCTGCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: SVDPLFPGLSSFPNSSRPRTTGA*ILLQAM
Trigger: CATCGCCTGCAGGAGGATCAAGGCGCCGGTGGTCCT...TGGCCTGGAGGAGTTCGGGAAGGAGGATAGACCAGGAAATAAAGGGTCAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATAGCAGACAGACAGAGTaGCATGGAGGCTGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: DSLQGSHASGMVVDRELHSRQTE*HGGWQV
Trigger: CACCTGCCAGCCTCCATGCAACTCTGTCTGTCTGCT...ATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp TCACCGCAGGGCCCCCGGGCAGGCTTGGGACTTGGCCCTAAATGGACTTTGACACAGCACACAGCTCTGTaGACCCTTTATTTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SPQGPRAGLGLGPKWTLTQHTAL*TLYFLV
Trigger: GACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTG...TGTCAAAGTCCATTTAGGGCCAAGTCCCAAGCCTGCCCGGGGGCCCTGCGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CAA 90 bp AGGCTGGCAGGTGGCCAGGAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTATCTGTTGGTCTGTaGCACGCCCAGCTAAGAGAA +
Preference number: 5 (lower is better)
Translates to: RLAGGQEAEGVIIPAGESLSVGL*HAQLRE
Trigger: TTCTCTTAGCTGGGCGTGCAACAGACCAACAGATAA...GCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTCCTGGCCACCTGCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS GCA 90 bp TGGGGAAACTGGGCCACGGCAGGATCCAGGTTGTTCATAATCATGTaGATGATGGCGGCAGCCACTTTCGTCTGGCAGGGGTACTGCTCA +
Preference number: 5 (lower is better)
Translates to: WGNWATAGSRLFIIM*MMAAATFVWQGYCS
Trigger: TGAGCAGTACCCCTGCCAGACGAAAGTGGCTGCCGCCATCATGCACATGATTATGAACAACCTGGATCCTGCCGTGGCCCAGTTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp AGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTCGATGTGTCCGTACAGTaGCAGCTCCTGGGCAAACTC +
Preference number: 5 (lower is better)
Translates to: SLQGSHASGMVVDRELHVDVSVQ*QLLGKL
Trigger: GAGTTTGCCCAGGAGCTGCAACTGTACGGACACATC...GACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp ACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGGCCAGGGTCCAGAAGTaGCTTGCACAGACAGCAGAT +
Preference number: 5 (lower is better)
Translates to: TAFRAPMQVAWLWTESCMARVQK*LAQTAD
Trigger: ATCTGCTGTCTGTGCAAGCAACTTCTGGACCCTGGC...CATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp GAAGCAGAGGGTGTGATCATCCCAGCCGGAGAGAGCTTGACCAGTGTTCACCGCAGGATGAGTTATCTGTaGGTCTGTTGCACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: EAEGVIIPAGESLTSVHRRMSYL*VCCTPS
Trigger: GCTGGGCGTGCAACAGACCAACAGATAACTCATCCT...GCGGTGAACACTGGTCAAGCTCTCTCCGGCTGGGATGATCACACCCTCTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CAA 90 bp ATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGACCAGCCCAGGGCTTGTaGCAATCCCAGCTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: MDFDSLQGSHASGMVVDRPAQGL*QSQLKD
Trigger: GTCCTTCAGCTGGGATTGCAACAAGCCCTGGGCTGG...TCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383579.3
CDS TCA 90 bp CATTGCCGTAGTCCCAGAAGAAGAACTTCTCCTCGGCCAACCTGTTaGTGGCTGAGACTTGCCTCCTCAGGCTTTCCTGGACCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: HCRSPRRRTSPRPTC*WLRLASSGFPGPGP
Trigger: AGGACCTGGTCCAGGAAAGCCTGAGGAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGGAGAAGTTCTTCTTCTGGGACTACGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp TTGGGACTTGGCCCTAAATGGACTTTGACAGCCTTCAGGGCTCCCATGCAAGTGTCCTCGGCCAACCTGTaGATGGCTGAGACTTGCCTC +
Preference number: 5 (lower is better)
Translates to: LGLGPKWTLTAFRAPMQVSSANL*MAETCL
Trigger: GAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGGA...CACTTGCATGGGAGCCCTGAAGGCTGTCAAAGTCCATTTAGGGCCAAGTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CTCATTTCTTCCCCAGTAAGTGATCATTTATCCTTAGGGCAGACCCGGCCTGCCGATGTGTCCGTACAGTaGCAGCTCCTGGGCAAACTC +
Preference number: 5 (lower is better)
Translates to: LISSPVSDHLSLGQTRPADVSVQ*QLLGKL
Trigger: GAGTTTGCCCAGGAGCTGCAACTGTACGGACACATC...GGCAGGCCGGGTCTGCCCTAAGGATAAATGATCACTTACTGGGGAAGAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS-3UTR CAA 90 bp CAGCCTTCAGGGCTCCCATGCAAGTGGCATGGTTGTGGACAGAGAGCTGCATGTACGGCAGGATCCAGGTaGTTCATAATCATGTGCATG +
Preference number: 5 (lower is better)
Translates to: QPSGLPCKWHGCGQRAACTAGSR*FIIMCM
Trigger: CATGCACATGATTATGAACAACCTGGATCCTGCCGT...ACATGCAGCTCTCTGTCCACAACCATGCCACTTGCATGGGAGCCCTGAAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS-3UTR CAA 90 bp CCCACAGTGCAGCACACAGCTCTGTTGACCCTTTATTTCCTGGTCTATCCTCCTCACAAAACTAGGCTTTaGTTCACAAGGGAAAGGGGA +
Preference number: 5 (lower is better)
Translates to: PTVQHTALLTLYFLVYPPHKTRL*FTRERG
Trigger: TCCCCTTTCCCTTGTGAACAAAAGCCTAGTTTTGTG...AGGAGGATAGACCAGGAAATAAAGGGTCAACAGAGCTGTGTGCTGCACTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290868.7
CDS TCA 72 bp TTGATCACCTCACCCCAGCCCACGCCCCCTCCGTTGTaGAGGGCGACCCAGGTGGCTCCGCGACAGGCATCT +
Preference number: 6 (lower is better)
Translates to: LITSPQPTPPPL*RATQVAPRQAS
Trigger: AGATGCCTGTCGCGGAGCCACCTGGGTCGCCCTTCACAACGGAGGGGGCGTGGGCTGGGGTGAGGTGATCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CCA 72 bp AGCCCACGCCCCCTCCGTTGTGAAGGGCGACCCAGGTaGCTCCGCGACAGGCATCTCCCACGAAGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SPRPLRCEGRPR*LRDRHLPRSSA
Trigger: TGCAGAACTTCGTGGGAGATGCCTGTCGCGGAGCCACCTGGGTCGCCCTTCACAACGGAGGGGGCGTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CCA 72 bp ACAGATGTGGCCAGTTCGTCTGTGACCGCCAGGTCCTaGGGGTCCCCCGATGTGCACACCCAGCGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: TDVASSSVTARS*GSPDVHTQRKG
Trigger: GCCTTTCCGCTGGGTGTGCACATCGGGGGACCCCCAGGACCTGGCGGTCACAGACGAACTGGCCACATCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS TCA 72 bp TCCCTAAAGGGGCTGTCGGTGCCGCTCACGTCATGGTaGTCTCGGCTCAGGACCACCGGCGCCTTGATCCTC +
Preference number: 6 (lower is better)
Translates to: SLKGLSVPLTSW*SRLRTTGALIL
Trigger: GAGGATCAAGGCGCCGGTGGTCCTGAGCCGAGATCACCATGACGTGAGCGGCACCGACAGCCCCTTTAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS GCA 72 bp CACCTCTGCTATCACACCGATGCACCCCACGATGACTaGGGCCTTGGCCTGAGCCCCACTCATTCCGCCGAG +
Preference number: 6 (lower is better)
Translates to: HLCYHTDAPHDD*GLGLSPTHSAE
Trigger: CTCGGCGGAATGAGTGGGGCTCAGGCCAAGGCCGCAGTCATCGTGGGGTGCATCGGTGTGATAGCAGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CAA 90 bp CCCACCACCAGCCGGTGCCTGGCGGCCTCCCGGATCCAGCGGATGTaGTCCATGTACTGCAGCTTCACAGACACCTTCACTCCATCAGCA +
Preference number: 6 (lower is better)
Translates to: PTTSRCLAASRIQRM*SMYCSFTDTFTPSA
Trigger: TGCTGATGGAGTGAAGGTGTCTGTGAAGCTGCAGTACATGGACAACATCCGCTGGATCCGGGAGGCCGCCAGGCACCGGCTGGTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS GCA 72 bp CAGGTGGCTCCGCGACAGGCATCTCCCACGAAGTTCTaGACAGCCATGTCTGCACAGAAGGCAGAGCCGTCG +
Preference number: 6 (lower is better)
Translates to: QVAPRQASPTKF*TAMSAQKAEPS
Trigger: CGACGGCTCTGCCTTCTGTGCAGACATGGCTGTGCAGAACTTCGTGGGAGATGCCTGTCGCGGAGCCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CCA 72 bp AGGTCCACCAAGCACTCCCCCGTCGTGTCCAATTCGTaGACCAGGCGCTCCCAAAGAGCCACCACGTTGCCA +
Preference number: 6 (lower is better)
Translates to: RSTKHSPVVSNS*TRRSQRATTLP
Trigger: TGGCAACGTGGTGGCTCTTTGGGAGCGCCTGGTCCACGAATTGGACACGACGGGGGAGTGCTTGGTGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CAA 90 bp TGCCTCCTCAGGCTTTCCTGGACCAGGTCCTTGAACACAGCAGGGTaGGAGGCCATGAGGCTCTGGGCCTCCGTGAAGCTGAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: CLLRLSWTRSLNTAG*EAMRLWASVKLSCT
Trigger: TGTGCAGCTCAGCTTCACGGAGGCCCAGAGCCTCATGGCCTCCAACCCTGCTGTGTTCAAGGACCTGGTCCAGGAAAGCCTGAGGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CCA 72 bp GTTGGGAATGACCATCCCATTGGTGATGACGAGCCGTaGGGCACTGCGGCTGCTGGGAAAGAGGCCAAGTGG +
Preference number: 6 (lower is better)
Translates to: VGNDHPIGDDEP*GTAAAGKEAKW
Trigger: CCACTTGGCCTCTTTCCCAGCAGCCGCAGTGCCCCACGGCTCGTCATCACCAATGGGATGGTCATTCCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CAA 72 bp AGGCTTTCCTGGACCAGGTCCTTGAACACAGCAGGGTaGGAGGCCATGAGGCTCTGGGCCTCCGTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: RLSWTRSLNTAG*EAMRLWASVKL
Trigger: CAGCTTCACGGAGGCCCAGAGCCTCATGGCCTCCAACCCTGCTGTGTTCAAGGACCTGGTCCAGGAAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS CAA 72 bp AGCCGGTGCCTGGCGGCCTCCCGGATCCAGCGGATGTaGTCCATGTACTGCAGCTTCACAGACACCTTCACT +
Preference number: 6 (lower is better)
Translates to: SRCLAASRIQRM*SMYCSFTDTFT
Trigger: AGTGAAGGTGTCTGTGAAGCTGCAGTACATGGACAACATCCGCTGGATCCGGGAGGCCGCCAGGCACCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS TCA 72 bp GGTCTGGCAGATGATCTCATAGGCCTTCTGGTTCCCTaGCCAGCAGCGCCGGGCCACACCATTGGAGACATC +
Preference number: 6 (lower is better)
Translates to: GLADDLIGLLVP*PAAPGHTIGDI
Trigger: GATGTCTCCAATGGTGTGGCCCGGCGCTGCTGGTCAGGGAACCAGAAGGCCTATGAGATCATCTGCCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS GCA 72 bp CCGCTCCTGCTCTCTGGGCCTCCAAGAGGAAGGCATTaGCGTAGTCCCAGAAGAAGAACTTCTCCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: PLLLSGPPRGRH*RSPRRRTSPRP
Trigger: TGGCCGAGGAGAAGTTCTTCTTCTGGGACTACGGCAATGCCTTCCTCTTGGAGGCCCAGAGAGCAGGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS GCA 72 bp TGGGCCACGGCAGGATCCAGGTTGTTCATAATCATGTaGATGATGGCGGCAGCCACTTTCGTCTGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: WATAGSRLFIIM*MMAAATFVWQG
Trigger: CCCCTGCCAGACGAAAGTGGCTGCCGCCATCATGCACATGATTATGAACAACCTGGATCCTGCCGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS TCA 72 bp CCACCAAGGTGCTGTTCTCCTGCATGGTCTGGCAGATaGTCTCATAGGCCTTCTGGTTCCCTGACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PPRCCSPAWSGR*SHRPSGSLTSS
Trigger: GCTGCTGGTCAGGGAACCAGAAGGCCTATGAGATCATCTGCCAGACCATGCAGGAGAACAGCACCTTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS GCA 72 bp GCGGCCTCCCGGATCCAGCGGATGTTGTCCATGTACTaGAGCTTCACAGACACCTTCACTCCATCAGCAATG +
Preference number: 6 (lower is better)
Translates to: AASRIQRMLSMY*SFTDTFTPSAM
Trigger: CATTGCTGATGGAGTGAAGGTGTCTGTGAAGCTGCAGTACATGGACAACATCCGCTGGATCCGGGAGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS TCA 72 bp GAAGAAGAACTTCTCCTCGGCCAACCTGTTGATGGCTaGGACTTGCCTCCTCAGGCTTTCCTGGACCAGGTC +
Preference number: 6 (lower is better)
Translates to: EEELLLGQPVDG*DLPPQAFLDQV
Trigger: GACCTGGTCCAGGAAAGCCTGAGGAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGGAGAAGTTCTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS GCA 72 bp AACGATTCCCTGGGGACCGATGTAGCAGTAGCTACCTaGTGTCATCTGGCCGTACATTGTAACCCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: NDSLGTDVAVAT*CHLAVHCNPQG
Trigger: GCCTTGGGGGTTACAATGTACGGCCAGATGACAGCAGGTAGCTACTGCTACATCGGTCCCCAGGGAATCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS GCA 72 bp AACTTCTCCTCGGCCAACCTGTTGATGGCTGAGACTTaGCTCCTCAGGCTTTCCTGGACCAGGTCCTTGAAC +
Preference number: 6 (lower is better)
Translates to: NFSSANLLMAET*LLRLSWTRSLN
Trigger: GTTCAAGGACCTGGTCCAGGAAAGCCTGAGGAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGGAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3
CDS TCA 72 bp AGTCCCAGAAGAAGAACTTCTCCTCGGCCAACCTGTTaGTGGCTGAGACTTGCCTCCTCAGGCTTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: SPRRRTSPRPTC*WLRLASSGFPG
Trigger: TCCAGGAAAGCCTGAGGAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGGAGAAGTTCTTCTTCTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290868.7
ENST00000383579.3