RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for URGCP (Homo sapiens)

Ensembl gene IDs: ENSG00000106608

Ensembl transcript IDs: ENST00000336086.10, ENST00000402306.7, ENST00000426198.5, ENST00000439702.5, ENST00000443736.5, ENST00000446958.1, ENST00000453200.6, ENST00000455877.5, ENST00000467410.1, ENST00000474376.1, ENST00000477768.1, ENST00000478747.5, ENST00000497914.5

Found 760 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTaGCCACAGCAGCCTCCTACACCTGAACTGGGTTTCTCTGCACAC +
Preference number: 1 (lower is better)
Translates to: RHQSTAPHGCPIRQG*PQQPPTPELGFSAH
Trigger: GTGTGCAGAGAAACCCAGTTCAGGTGTAGGAGGCTGCTGTGGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR GCA 90 bp GGTCCACTGGAGGCCCTTGGGTTGGGCGGGAGCAAGGCCTACTTCTaGTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCACCTG +
Preference number: 1 (lower is better)
Translates to: GPLEALGLGGSKAYF*FLRTTSPPLSWDHL
Trigger: CAGGTGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCTCCCGCCCAACCCAAGGGCCTCCAGTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR GCA 90 bp GTGCCATGGGAGTGCCTTGCACACCACGGGCACTCACATCTTGAATaGTGGTCCACTGGAGGCCCTTGGGTTGGGCGGGAGCAAGGCCTA +
Preference number: 1 (lower is better)
Translates to: VPWECLAHHGHSHLE*WSTGGPWVGREQGL
Trigger: TAGGCCTTGCTCCCGCCCAACCCAAGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CCA 90 bp CCATGGGAGTGCCTTGCACACCACGGGCACTCACATCTTGAATGCTaGTCCACTGGAGGCCCTTGGGTTGGGCGGGAGCAAGGCCTACTT +
Preference number: 1 (lower is better)
Translates to: PWECLAHHGHSHLEC*STGGPWVGREQGLL
Trigger: AAGTAGGCCTTGCTCCCGCCCAACCCAAGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CCA 90 bp CACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTTaGGTTGGGCGGGAGCAAGGCCTACTTCTGCTTCCTCAGGACAAC +
Preference number: 1 (lower is better)
Translates to: HHGHSHLECWSTGGP*VGREQGLLLLPQDN
Trigger: GTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCTCCCGCCCAACCCAAGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR TCA 90 bp GGCAGAGGTATAACAAAGTGCTGTGGGGCACAACAGAGCGACCAGTaGACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGT +
Preference number: 1 (lower is better)
Translates to: GRGITKCCGAQQSDQ*TLPGQGSGKPSQIS
Trigger: ACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCGCTCTGTTGTGCCCCACAGCACTTTGTTATACCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CCA 90 bp GGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATaGGAGTGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGG +
Preference number: 1 (lower is better)
Translates to: GVREAFTDQSINTVP*ECLAHHGHSHLECW
Trigger: CCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR GCA 90 bp AGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTaGCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACT +
Preference number: 1 (lower is better)
Translates to: REAFTDQSINTVPWE*LAHHGHSHLECWST
Trigger: AGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CCA 90 bp AACAAAGTGCTGTGGGGCACAACAGAGCGACCAGTGAACTCTTCCTaGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACG +
Preference number: 1 (lower is better)
Translates to: NKVLWGTTERPVNSS*AGVREAFTDQSINT
Trigger: CGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCGCTCTGTTGTGCCCCACAGCACTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CCA 90 bp CTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCTaGTCTGTGAGGTCACTTCCTCTTTTAACACTGTTGAGGAGACTC +
Preference number: 1 (lower is better)
Translates to: LPTLGAVIFLVTSLS*SVRSLPLLTLLRRL
Trigger: GAGTCTCCTCAACAGTGTTAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTTGTCCTGGGACCACCTaGCCGCCTGGGCCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPCPGTT*PPGPAV
Trigger: CACTGCAGGCCCAGGCGGGCAGGTGGTCCCAGGACA...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAACAGCCCCACACGGGTaGCCCATCAGACAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSTAPHG*PIRQGC
Trigger: GCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTACCCCGCAGGATCCTTaGCAGGAGCTGAGACAGAAC +
Preference number: 2 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPTPQDP*QELRQN
Trigger: GTTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGT...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATCGCCTGGGCCTGCAGTaGCTAAGGACGCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNRLGLQ*LRTLLP
Trigger: TGGGAGCAGCGTCCTTAGTCACTGCAGGCCCAGGCG...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCACCCATCAGACAGGGCTaGCCACAGCAGCCTCCTACA +
Preference number: 2 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPPIRQG*PQQPPT
Trigger: TGTAGGAGGCTGCTGTGGGCAGCCCTGTCTGATGGG...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCGCCTGGGCCTGCAGTaGCTAAGGACGCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: AFTDQSINTVPWECLAHHRLGLQ*LRTLLP
Trigger: TGGGAGCAGCGTCCTTAGTCACTGCAGGCCCAGGCG...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCACGGGCACTCACATCTTaGATGCTGGTCCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSRALTS*MLVHWR
Trigger: CCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCG...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCACTCCAGGGGCCAGTaGCAGAGAGCAGCTATACAG +
Preference number: 2 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALHSRGQ*QRAAIQ
Trigger: CTGTATAGCTGCTCTCTGTCACTGGCCCCTGGAGTG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCGGGCACTCACATCTTaGATGCTGGTCCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: WAGVREAFTDQSINTVPWRALTS*MLVHWR
Trigger: CCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTCCCATCAGACAGGGCTaGCCACAGCAGCCTCCTACA +
Preference number: 2 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPPIRQG*PQQPPT
Trigger: TGTAGGAGGCTGCTGTGGGCAGCCCTGTCTGATGGG...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCCATCAGACAGGGCTaGCCACAGCAGCCTCCTACA +
Preference number: 2 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPPIRQG*PQQPPT
Trigger: TGTAGGAGGCTGCTGTGGGCAGCCCTGTCTGATGGG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCCATCAGACAGGGCTaGCCACAGCAGCCTCCTACA +
Preference number: 2 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAPIRQG*PQQPPT
Trigger: TGTAGGAGGCTGCTGTGGGCAGCCCTGTCTGATGGG...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATGCCATGGGAGTGCCTTaGACACCACGGGCACTCACA +
Preference number: 2 (lower is better)
Translates to: VNSSWAGVREAFTDQSINAMGVP*TPRALT
Trigger: TGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGC...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCAGCCTCCTACACCTaGACTGGGTTTCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPAASYT*TGFLCT
Trigger: TGTGCAGAGAAACCCAGTTCAGGTGTAGGAGGCTGC...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAGCAGCCTCCTACACCTaGACTGGGTTTCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRAASYT*TGFLCT
Trigger: TGTGCAGAGAAACCCAGTTCAGGTGTAGGAGGCTGC...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGGCAGCCTCCTACACCTaGACTGGGTTTCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: CCLSPYPGGCDILGNISEAASYT*TGFLCT
Trigger: TGTGCAGAGAAACCCAGTTCAGGTGTAGGAGGCTGC...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGAGCAAGGCCTACTTCTaGTTCCTCAGGACAACTTCC +
Preference number: 2 (lower is better)
Translates to: WAGVREAFTDQSINTVPWSKAYF*FLRTTS
Trigger: GGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCT...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR TCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAGCCTCCTACACCTaGACTGGGTTTCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWAASYT*TGFLCT
Trigger: TGTGCAGAGAAACCCAGTTCAGGTGTAGGAGGCTGC...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTCTTCTCATGTCGATTaGGCACCAGCCATTCTCAGG +
Preference number: 2 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGSSHVD*APAILR
Trigger: CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCGTAACATCTCTGAGCTaGTCTGTGAGGTCACTTCCT +
Preference number: 2 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALVTSLS*SVRSLP
Trigger: AGGAAGTGACCTCACAGACCAGCTCAGAGATGTTAC...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR GCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAAGCAAGGCCTACTTCTaGTTCCTCAGGACAACTTCC +
Preference number: 2 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPSKAYF*FLRTTS
Trigger: GGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCT...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATCTTCTCATGTCGATTaGGCACCAGCCATTCTCAGG +
Preference number: 2 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPSSHVD*APAILR
Trigger: CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CAA 90 bp GAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTaGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTA +
Preference number: 2 (lower is better)
Translates to: EQTAACLPTLGAVIF*VTSLSWSVRSLPLL
Trigger: TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CAA 90 bp ACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAACACTGTaGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCG +
Preference number: 2 (lower is better)
Translates to: TSLSWSVRSLPLLTL*RRLQTLSFPRLLMS
Trigger: CGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGTGTTAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR GCA 72 bp GAGGCCCTTGGGTTGGGCGGGAGCAAGGCCTACTTCTaGTTCCTCAGGACAACTTCCCCACCTCTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: EALGLGGSKAYF*FLRTTSPPLSW
Trigger: CCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCTCCCGCCCAACCCAAGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CCA 72 bp CACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTTaGGTTGGGCGGGAGCAAGGCCTACTTCTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: HSHLECWSTGGP*VGREQGLLLLP
Trigger: AGGAAGCAGAAGTAGGCCTTGCTCCCGCCCAACCCAAGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CCA 72 bp CTGTGGGGCACAACAGAGCGACCAGTGAACTCTTCCTaGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCA +
Preference number: 3 (lower is better)
Translates to: LWGTTERPVNSS*AGVREAFTDQS
Trigger: TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCGCTCTGTTGTGCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAACGGGCACTCACATCTaGAATGCTGGTCCACTGGAG +
Preference number: 3 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSTGTHI*NAGPLE
Trigger: CTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCAGAACAAACTGCTGCTaGTCTCCCTACCCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALRTNCC*SPYPGG
Trigger: GCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCT...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATCACCCCGCAGGATCCTaGACAGGAGCTGAGACAGAA +
Preference number: 3 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNHPAGS*TGAETE
Trigger: TTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGTG...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTAGAACAAACTGCTGCTaGTCTCCCTACCCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPRTNCC*SPYPGG
Trigger: GCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATAGAACAAACTGCTGCTaGTCTCCCTACCCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: VNSSWAGVREAFTDQSINRTNCC*SPYPGG
Trigger: GCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCT...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGGTCTTCTCATGTCGATaGGGCACCAGCCATTCTCAG +
Preference number: 3 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLVFSCR*GTSHSQ
Trigger: CTGAGAATGGCTGGTGCCCAATCGACATGAGAAGAC...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTGTCTTCTCATGTCGATaGGGCACCAGCCATTCTCAG +
Preference number: 3 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPVFSCR*GTSHSQ
Trigger: CTGAGAATGGCTGGTGCCCAATCGACATGAGAAGAC...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGGCACTCACATCTaGAATGCTGGTCCACTGGAG +
Preference number: 3 (lower is better)
Translates to: VNSSWAGVREAFTDQSINTGTHI*NAGPLE
Trigger: CTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGT...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCCTCTTTTAACACTGTaGAGGAGACTCCAAACCCTG +
Preference number: 3 (lower is better)
Translates to: CCLSPYPGGCDILGNISEPLLTL*RRLQTL
Trigger: CAGGGTTTGGAGTCTCCTCAACAGTGTTAAAAGAGG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATGGGGCTGTGATATTCTaGGTAACATCTCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: VNSSWAGVREAFTDQSINGAVIF*VTSLSW
Trigger: CCAGCTCAGAGATGTTACCAAGAATATCACAGCCCC...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR GCA 72 bp TTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTaGCTTGCACACCACGGGCACTCACATCTTGAATGC +
Preference number: 3 (lower is better)
Translates to: FTDQSINTVPWE*LAHHGHSHLEC
Trigger: GCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR-3UTR CAA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCCTCTTTTAACACTGTaGAGGAGACTCCAAACCCTG +
Preference number: 3 (lower is better)
Translates to: VNSSWAGVREAFTDQSINPLLTL*RRLQTL
Trigger: CAGGGTTTGGAGTCTCCTCAACAGTGTTAAAAGAGG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCGGCTGGGCCACCCGTaGCAGGCCCCACTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPRLGHP*QAPLHP
Trigger: TGGATGGAGTGGGGCCTGGCACGGGTGGCCCAGCCG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCAGTCCCACTGCCTGTaGCCCGGGCTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPQSHCL*PGLRTA
Trigger: CGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCCTTCAGGAGCCCTGTaGCCCAGCGGACGGGCATGC +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPPSGAL*PSGRAC
Trigger: GCATGCCCGTCCGCTGGGTCACAGGGCTCCTGAAGG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCTCCAGGGGTCCCCCTaGAGCCTCAGCTCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPLQGSP*SLSSSL
Trigger: AAGGGACGAGCTGAGGCTGCAGGGGGACCCCTGGAG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCTGCCGGCAGCCTCCCTaGCTCCACAAGACAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPCRQPP*LHKTAL
Trigger: GAGAGCTGTCTTGTGGAGGCAGGGAGGCTGCCGGCA...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCATGGGAGGTGCTCCGTaGCACAGGCCTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPMGGAP*HRPGMC
Trigger: GCACATCCCAGGCCTGTGGCACGGAGCACCTCCCAT...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCACGGTGCCATGGGAGTaGCTTGCACACCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPTVPWE*LAHHGH
Trigger: GTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGT...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCGAAGGCGGGCGCCCTaGACAAGACCACGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPRRRAP*TRPRCL
Trigger: AAGACAGCGTGGTCTTGTCCAGGGCGCCCGCCTTCG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCTCCGAGGCCAAGCCTaGGAAGTGGGCAAAACGCCT +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPLRGQA*EVGKTP
Trigger: AGGCGTTTTGCCCACTTCCCAGGCTTGGCCTCGGAG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCACCCCGCAGGATCCTTaGCAGGAGCTGAGACAGAAC +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPTPQDP*QELRQN
Trigger: GTTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGT...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCGGGCACTCACATCTTaGATGCTGGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPRALTS*MLVHWR
Trigger: CCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCAGTTTGCGGGCTGCGTaGGCCATGTCCTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPSLRAA*AMSSTD
Trigger: ATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACT...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCCCGAGGAGGGATCATaGCCGTTCTGCTGCATTCGA +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPPEEGS*PFCCIR
Trigger: TCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTTGTCTCAGTCGCGGCTaGGCCACCCGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPCLSRG*ATRARP
Trigger: GGGCCTGGCACGGGTGGCCCAGCCGCGACTGAGACA...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCGCAGCTCTTCCCTGTaGCAAACCGCAGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPRSSSL*QTAAQT
Trigger: TGTTTGGGCTGCGGTTTGCCACAGGGAAGAGCTGCG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTCCTTCAGGAGCCCTGTaGCCCAGCGGACGGGCATGC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPPSGAL*PSGRAC
Trigger: GCATGCCCGTCCGCTGGGTCACAGGGCTCCTGAAGG...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCGCAGCCTCCTACACCTaGACTGGGTTTCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPAASYT*TGFLCT
Trigger: TGTGCAGAGAAACCCAGTTCAGGTGTAGGAGGCTGC...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCACCCGGAAGCTCCCCATaGCCCTTGGGGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPPGSSP*PLGAGT
Trigger: GGTCCCAGCCCCCAAGGGGCATGGGGAGCTTCCGGG...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTGCCCGGGCGACGCCATaGGCGCAGCGAGGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPARATP*AQRGLR
Trigger: GCGGAGACCTCGCTGCGCTCATGGCGTCGCCCGGGC...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402306.7
CDS-3UTR TCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTCCCGGGCGACGCCATaGGCGCAGCGAGGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWSRATP*AQRGLR
Trigger: GCGGAGACCTCGCTGCGCTCATGGCGTCGCCCGGGA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTCAGAAGCAGTCCCACTaGCTGTGGCCCGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPQKQSH*LWPGLR
Trigger: CCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTG...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGCCCAGTTTGCGGGCTaGGTGCGCCATGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPAQFAG*VRHVLH
Trigger: GTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATGGCCAGGCCTGCCAGTaGCCGGAAGCCGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNGQACQ*PEAVAL
Trigger: CAGGGCGACGGCTTCCGGGCACTGGCAGGCCTGGCC...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCGGCCAGGCCTGCCAGTaGCCGGAAGCCGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALGQACQ*PEAVAL
Trigger: CAGGGCGACGGCTTCCGGGCACTGGCAGGCCTGGCC...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCATGCGGCCATGGGAGGTaGTCCGTGCCACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSCGHGR*SVPQAW
Trigger: CCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCA...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCTGGCGTATCAGGGGTaGGCAGCTCAGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPLAYQG*AAQKRN
Trigger: ATTCCTTTTCTGAGCTGCCCACCCCTGATACGCCAG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTTGGGCAAAACGCCTCTaGCCTGCCGGCAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPWAKRL*PAGSLP
Trigger: AGGGAGGCTGCCGGCAGGCCAGAGGCGTTTTGCCCA...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAGCCCAGTTTGCGGGCTaGGTGCGCCATGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPAQFAG*VRHVLH
Trigger: GTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGC...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCACTCCAGGGGTCCCCCTaGAGCCTCAGCTCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSLQGSP*SLSSSL
Trigger: AAGGGACGAGCTGAGGCTGCAGGGGGACCCCTGGAG...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCTCATGGCCGTTCTGCTaGATTCGAAGTTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPSWPFC*IRSSSS
Trigger: GCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGA...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCGGATCATGGCCGTTCTaGTGCATTCGAAGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPGSWPF*CIRSSS
Trigger: GCTAGAACTTCGAATGCAGCAGAACGGCCATGATCC...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTACGGTGCCATGGGAGTaGCTTGCACACCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPTVPWE*LAHHGH
Trigger: GTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGT...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTGTCTCAGTCGCGGCTaGGCCACCCGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWCLSRG*ATRARP
Trigger: GGGCCTGGCACGGGTGGCCCAGCCGCGACTGAGACA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGCTCCCCCACGTCTGTaGTGCCCCCATGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPAPPRL*CPHALV
Trigger: GACCAAAGCATGGGGGCACCACAGACGTGGGGGAGC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTCAACAGAGCGACCAGTaGACTCTTCCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPQQSDQ*TLPGQG
Trigger: CCCCTGCCCAGGAAGAGTTCACTGGTCGCTCTGTTG...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTCCCGGAAGCTCCCCATaGCCCTTGGGGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGPGSSP*PLGAGT
Trigger: GGTCCCAGCCCCCAAGGGGCATGGGGAGCTTCCGGG...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGCCCGGAAGCTCCCCATaGCCCTTGGGGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLPGSSP*PLGAGT
Trigger: GGTCCCAGCCCCCAAGGGGCATGGGGAGCTTCCGGG...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTCGGCTGGGCCACCCGTaGCAGGCCCCACTCCATCCA +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPRLGHP*QAPLHP
Trigger: TGGATGGAGTGGGGCCTGGCACGGGTGGCCCAGCCG...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAATGGGAGGTGCTCCGTaGCACAGGCCTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPMGGAP*HRPGMC
Trigger: GCACATCCCAGGCCTGTGGCACGGAGCACCTCCCAT...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAGTAGGCCAAGCTCACTaGGGCCATGGGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSVGQAH*GHGRCS
Trigger: GGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTAC...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTCCCATCAGACAGGGCTaGCCACAGCAGCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPPIRQG*PQQPPT
Trigger: TGTAGGAGGCTGCTGTGGGCAGCCCTGTCTGATGGG...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATTGTCCTGGGACCACCTaGCCGCCTGGGCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNCPGTT*PPGPAV
Trigger: CACTGCAGGCCCAGGCGGGCAGGTGGTCCCAGGACA...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTGTCCTGGGACCACCTaGCCGCCTGGGCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWCPGTT*PPGPAV
Trigger: CACTGCAGGCCCAGGCGGGCAGGTGGTCCCAGGACA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCACACAGGCCTGGCGTCTaGGAGCACGTCCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSHRPGV*EHVQHH
Trigger: ATGGTGCTGGACGTGCTCCCAGACGCCAGGCCTGTG...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCACACAGGCCTGGCGTCTaGGAGCACGTCCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPHRPGV*EHVQHH
Trigger: ATGGTGCTGGACGTGCTCCCAGACGCCAGGCCTGTG...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCACCTTCTCCACAGGCCTaGCGTCTGGGAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSPSPQA*RLGARP
Trigger: TGGACGTGCTCCCAGACGCCAGGCCTGTGGAGAAGG...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCACGAAGGCGGGCGCCCTaGACAAGACCACGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPRRRAP*TRPRCL
Trigger: AAGACAGCGTGGTCTTGTCCAGGGCGCCCGCCTTCG...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCAGTCCCACTGCCTGTaGCCCGGGCTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRQSHCL*PGLRTA
Trigger: CGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATGTCTCAGTCGCGGCTaGGCCACCCGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPCLSRG*ATRARP
Trigger: GGGCCTGGCACGGGTGGCCCAGCCGCGACTGAGACA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATGTCTCAGTCGCGGCTaGGCCACCCGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRCLSRG*ATRARP
Trigger: GGGCCTGGCACGGGTGGCCCAGCCGCGACTGAGACA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCTCATACTGTCAAAACTaGTCTGCAGAGAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPSYCQN*SAESPG
Trigger: TCCAGGACTCTCTGCAGATCAGTTTTGACAGTATGA...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTCATTGGTGCCCAAGTTaGGGTCCCGATGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPHWCPS*GPDARS
Trigger: GCTTCTGGCATCGGGACCTCAACTTGGGCACCAATG...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTCCTTCAGGAGCCCTGTaGCCCAGCGGACGGGCATGC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGPSGAL*PSGRAC
Trigger: GCATGCCCGTCCGCTGGGTCACAGGGCTCCTGAAGG...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCACAACAGAGCGACCAGTaGACTCTTCCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPQQSDQ*TLPGQG
Trigger: CCCCTGCCCAGGAAGAGTTCACTGGTCGCTCTGTTG...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTTTCCGGGCGACGCCATaGGCGCAGCGAGGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSFRATP*AQRGLR
Trigger: GCGGAGACCTCGCTGCGCTCATGGCGTCGCCCGGAA...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443736.5
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCCCGGAAGCTCCCCATaGCCCTTGGGGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINPGSSP*PLGAGT
Trigger: GGTCCCAGCCCCCAAGGGGCATGGGGAGCTTCCGGG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCAGAAGCAGTCCCACTaGCTGTGGCCCGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWQKQSH*LWPGLR
Trigger: CCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCAGAAGCAGTCCCACTaGCTGTGGCCCGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALQKQSH*LWPGLR
Trigger: CCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGCTGGGCCACCCGTaGCAGGCCCCACTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPRLGHP*QAPLHP
Trigger: TGGATGGAGTGGGGCCTGGCACGGGTGGCCCAGCCG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACGGCTGGGCCACCCGTaGCAGGCCCCACTCCATCCA +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWARLGHP*QAPLHP
Trigger: TGGATGGAGTGGGGCCTGGCACGGGTGGCCCAGCCG...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGTGTGGACTTGCCCGTaGCTGGCACCCCGACGGTTG +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWVWTCP*LAPRRL
Trigger: CAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACAC...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATGTGTGGACTTGCCCGTaGCTGGCACCCCGACGGTTG +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNVWTCP*LAPRRL
Trigger: CAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACAC...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTGCGGCCATGGGAGGTaGTCCGTGCCACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGCGHGR*SVPQAW
Trigger: CCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATGTCCTGGGACCACCTaGCCGCCTGGGCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRCPGTT*PPGPAV
Trigger: CACTGCAGGCCCAGGCGGGCAGGTGGTCCCAGGACA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCAGTCCCACTGCCTGTaGCCCGGGCTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINQSHCL*PGLRTA
Trigger: CGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACAGTCCCACTGCCTGTaGCCCGGGCTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPQSHCL*PGLRTA
Trigger: CGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGCAGCCTCCTACACCTaGACTGGGTTTCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPAASYT*TGFLCT
Trigger: TGTGCAGAGAAACCCAGTTCAGGTGTAGGAGGCTGC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCACGCCTGGGCCTGCAGTaGCTAAGGACGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPRLGLQ*LRTLLP
Trigger: TGGGAGCAGCGTCCTTAGTCACTGCAGGCCCAGGCG...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCGCCTGGGCCTGCAGTaGCTAAGGACGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRRLGLQ*LRTLLP
Trigger: TGGGAGCAGCGTCCTTAGTCACTGCAGGCCCAGGCG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTCAACACGAGTGGGAGTaGAAACTGGCAGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPQHEWE*KLAEGH
Trigger: ATGGCCCTCTGCCAGTTTGCACTCCCACTCGTGTTG...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCAGAAGCAGTCCCACTaGCTGTGGCCCGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRQKQSH*LWPGLR
Trigger: CCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATCCACAGATACCCGCCTaGAGGGTGCCCGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNPQIPA*RVPAAH
Trigger: ATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGG...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCCACAGATACCCGCCTaGAGGGTGCCCGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALPQIPA*RVPAAH
Trigger: ATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAAGTTTGCGGGCTGCGTaGGCCATGTCCTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPSLRAA*AMSSTD
Trigger: ATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACT...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAAGTTTGCGGGCTGCGTaGGCCATGTCCTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSSLRAA*AMSSTD
Trigger: ATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTCTCCAGGGGTCCCCCTaGAGCCTCAGCTCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPLQGSP*SLSSSL
Trigger: AAGGGACGAGCTGAGGCTGCAGGGGGACCCCTGGAG...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCTCCAGGGGTCCCCCTaGAGCCTCAGCTCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISELQGSP*SLSSSL
Trigger: AAGGGACGAGCTGAGGCTGCAGGGGGACCCCTGGAG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTTCTGTGGTGCCCCCATaGTTTGGTCTCAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPSVVPP*FGLRVR
Trigger: TCTCACCCTGAGACCAAAGCATGGGGGCACCACAGA...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCACGGGCATGCTCAGCGTaGTCCCATCGATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPRACSA*SHRLAP
Trigger: TGGAGCTAATCGATGGGAGCACGCTGAGCATGCCCG...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACCCAGCGGACGGGCATaGTCAGCGTGCTCCCATCGA +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRPSGRA*SACSHR
Trigger: TCGATGGGAGCACGCTGAGCATGCCCGTCCGCTGGG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCCCAGCGGACGGGCATaGTCAGCGTGCTCCCATCGA +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEPSGRA*SACSHR
Trigger: TCGATGGGAGCACGCTGAGCATGCCCGTCCGCTGGG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTGTGTGGACTTGCCCGTaGCTGGCACCCCGACGGTTG +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPVWTCP*LAPRRL
Trigger: CAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACAC...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGGTGTGGACTTGCCCGTaGCTGGCACCCCGACGGTTG +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRVWTCP*LAPRRL
Trigger: CAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACAC...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAGCCACTGTGATGAGCTaGATGAAGGCCCCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSATVMS*MKAPRG
Trigger: TCCTCGAGGGGCCTTCATGCAGCTCATCACAGTGGC...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAGGGATGTGCCAGATGTaGTGCTTCTCAGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSGMCQM*CFSGSQ
Trigger: CTGCGACCCTGAGAAGCAGCACATCTGGCACATCCC...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAGGGATGTGCCAGATGTaGTGCTTCTCAGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPGMCQM*CFSGSQ
Trigger: CTGCGACCCTGAGAAGCAGCACATCTGGCACATCCC...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATGCGGCCATGGGAGGTaGTCCGTGCCACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPCGHGR*SVPQAW
Trigger: CCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTACAGCCCCACACGGGTaGCCCATCAGACAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPTAPHG*PIRQGC
Trigger: GCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAACAGCCCCACACGGGTaGCCCATCAGACAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRTAPHG*PIRQGC
Trigger: GCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGT...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGACAGCCCCACACGGGTaGCCCATCAGACAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLTAPHG*PIRQGC
Trigger: GCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTTGTCCTGGGACCACCTaGCCGCCTGGGCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSCPGTT*PPGPAV
Trigger: CACTGCAGGCCCAGGCGGGCAGGTGGTCCCAGGACA...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATCACAGGCCTGGCGTCTaGGAGCACGTCCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNHRPGV*EHVQHH
Trigger: ATGGTGCTGGACGTGCTCCCAGACGCCAGGCCTGTG...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATCGAAGGCGGGCGCCCTaGACAAGACCACGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNRRRAP*TRPRCL
Trigger: AAGACAGCGTGGTCTTGTCCAGGGCGCCCGCCTTCG...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGCACATTCCCAACGATaGCCCGGATCCTCTTCACGA +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPAHSQR*PGSSSR
Trigger: TCGTGAAGAGGATCCGGGCCATCGTTGGGAATGTGC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAGGTGCCCCCATGCTTTaGTCTCAGGGTGAGAAGCGT +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPGAPML*SQGEKR
Trigger: ACGCTTCTCACCCTGAGACCAAAGCATGGGGGCACC...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCGCTCCCCCACGTCTGTaGTGCCCCCATGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALAPPRL*CPHALV
Trigger: GACCAAAGCATGGGGGCACCACAGACGTGGGGGAGC...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATGGGCAAAACGCCTCTaGCCTGCCGGCAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPWAKRL*PAGSLP
Trigger: AGGGAGGCTGCCGGCAGGCCAGAGGCGTTTTGCCCA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGAGCTCACTGCGGCCATaGGAGGTGCTCCGTGCCACA +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWSSLRP*EVLRAT
Trigger: TGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCT...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAACTTGGAGTTGCTACTaGCGTCCATGCGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSTWSCY*RPCARR
Trigger: CCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCACGCTGTCAGTGCTGCTaGCCTTTACCAGGACATGTG +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSRCQCC*PLPGHV
Trigger: CACATGTCCTGGTAAAGGTCAGCAGCACTGACAGCG...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATGCTTTGGTCTCAGGGTaGGAAGCGTCTCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNALVSG*EASPEA
Trigger: AGCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGC...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGCCTTCAGGAGCCCTGTaGCCCAGCGGACGGGCATGC +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWPSGAL*PSGRAC
Trigger: GCATGCCCGTCCGCTGGGTCACAGGGCTCCTGAAGG...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAAAATCTGTCCCCAGCTaGCGTCAAGGCCCCACCTAT +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSKSVPS*RQGPTY
Trigger: ATAGGTGGGGCCTTGACGTCAGCTGGGGACAGATTT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCGCCTGGGCCTGCAGTaGCTAAGGACGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSRLGLQ*LRTLLP
Trigger: TGGGAGCAGCGTCCTTAGTCACTGCAGGCCCAGGCG...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACGCCTGGGCCTGCAGTaGCTAAGGACGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWARLGLQ*LRTLLP
Trigger: TGGGAGCAGCGTCCTTAGTCACTGCAGGCCCAGGCG...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTATCTCAGGTTTGTGTTaGGCTTCCCACGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPISGLC*ASHGRD
Trigger: GTCCCTACCGTGGGAAGCGCAACACAAACCTGAGAT...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTACCCGCCTGCAGGGTaGCCGCAGCACATTCCCAAC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGYPPAG*PQHIPN
Trigger: GTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCCACAGATACCCGCCTaGAGGGTGCCCGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEPQIPA*RVPAAH
Trigger: ATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTGCCCAGTTTGCGGGCTaGGTGCGCCATGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSAQFAG*VRHVLH
Trigger: GTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGC...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCCCGAGATGAACTCCTaGACCCCCGAGGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWPEMNS*TPEEGS
Trigger: TGATCCCTCCTCGGGGGTGCAGGAGTTCATCTCGGG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTGCCGGCAGCCTCCCTaGCTCCACAAGACAGCTCTC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGCRQPP*LHKTAL
Trigger: GAGAGCTGTCTTGTGGAGGCAGGGAGGCTGCCGGCA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGTGCCGGCAGCCTCCCTaGCTCCACAAGACAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLCRQPP*LHKTAL
Trigger: GAGAGCTGTCTTGTGGAGGCAGGGAGGCTGCCGGCA...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATCTCTCCAGTCGGACGTaGAGCTCCTTCAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNLSSRT*SSFRSP
Trigger: AGGGCTCCTGAAGGAGCTGCACGTCCGACTGGAGAG...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCTCTCCAGTCGGACGTaGAGCTCCTTCAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWLSSRT*SSFRSP
Trigger: AGGGCTCCTGAAGGAGCTGCACGTCCGACTGGAGAG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCTGGGCTGCAGCCCTaGTCAGGTCACCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSGLQP*SGHQVD
Trigger: ATCCACCTGGTGACCTGAGCAGGGCTGCAGCCCAGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTGTAGGCCAAGCTCACTaGGGCCATGGGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPVGQAH*GHGRCS
Trigger: GGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTAC...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGGTAGGCCAAGCTCACTaGGGCCATGGGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRVGQAH*GHGRCS
Trigger: GGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTAC...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTCACTCACATCTTGAATaGTGGTCCACTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPHSHLE*WSTGGP
Trigger: AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTG...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGCCATGGGAGTGCCTTaGACACCACGGGCACTCACA +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWAMGVP*TPRALT
Trigger: TGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGC...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGACGGTGCCATGGGAGTaGCTTGCACACCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLTVPWE*LAHHGH
Trigger: GTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACACAGGCCTGGCGTCTaGGAGCACGTCCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRHRPGV*EHVQHH
Trigger: ATGGTGCTGGACGTGCTCCCAGACGCCAGGCCTGTG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACCTTCTCCACAGGCCTaGCGTCTGGGAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRPSPQA*RLGARP
Trigger: TGGACGTGCTCCCAGACGCCAGGCCTGTGGAGAAGG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTCCTTCTCCACAGGCCTaGCGTCTGGGAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPPSPQA*RLGARP
Trigger: TGGACGTGCTCCCAGACGCCAGGCCTGTGGAGAAGG...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAGCACATTCCCAACGATaGCCCGGATCCTCTTCACGA +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSAHSQR*PGSSSR
Trigger: TCGTGAAGAGGATCCGGGCCATCGTTGGGAATGTGC...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTGGGTCCACGGCCCACTaGAGCTGGCAGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGGSTAH*SWQNSF
Trigger: GAAGGAGTTCTGCCAGCTCCAGTGGGCCGTGGACCC...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTGGGTCCACGGCCCACTaGAGCTGGCAGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPGSTAH*SWQNSF
Trigger: GAAGGAGTTCTGCCAGCTCCAGTGGGCCGTGGACCC...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAGCTCCCCCACGTCTGTaGTGCCCCCATGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRAPPRL*CPHALV
Trigger: GACCAAAGCATGGGGGCACCACAGACGTGGGGGAGC...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATGCCAAGCCTGGGAAGTaGGCAAAACGCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNAKPGK*AKRLWP
Trigger: AGGCCAGAGGCGTTTTGCCCACTTCCCAGGCTTGGC...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCATCTATCACCAGGATGTaGTCACAGCCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSSITRM*SQPRSW
Trigger: CCAGGACCTGGGCTGTGACCACATCCTGGTGATAGA...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCCGTGCCACAGGCCTaGGATGTGCCAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSVPQA*DVPDVL
Trigger: CAGCACATCTGGCACATCCCAGGCCTGTGGCACGGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGAGCTCACTGCGGCCATaGGAGGTGCTCCGTGCCACA +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRSSLRP*EVLRAT
Trigger: TGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCT...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACAGCTCACTGCGGCCATaGGAGGTGCTCCGTGCCACA +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHSSLRP*EVLRAT
Trigger: TGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAGCTCACTGCGGCCATaGGAGGTGCTCCGTGCCACA +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGSSLRP*EVLRAT
Trigger: TGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCT...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCCAGTGAACTCTTCCTaGGCAGGGGTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWPVNSS*AGVREA
Trigger: GGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCACTTGGAGATCCTGAATaGTGGCTGGGGCAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSLGDPE*WLGQGK
Trigger: CTTTCCTTGCCCCAGCCATCATTCAGGATCTCCAAG...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR TCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAGCTTTGGTCTCAGGGTaGGAAGCGTCTCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRALVSG*EASPEA
Trigger: AGCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGC...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTCAGAACCACCAGCCTTaGCCGTCTCTCCAGTCGGAC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPQNHQP*PSLQSD
Trigger: GTCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTG...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACAGAACCACCAGCCTTaGCCGTCTCTCCAGTCGGAC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRQNHQP*PSLQSD
Trigger: GTCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTTCGACAAGCCGTTCCTaGTGTTTTCGAGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPSTSRS*CFRVGI
Trigger: GATGCCTACTCGAAAACATCAGGAACGGCTTGTCGA...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCACCCCGCAGGATCCTTaGCAGGAGCTGAGACAGAAC +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALTPQDP*QELRQN
Trigger: GTTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGT...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCACTCCAGGGGCCAGTaGCAGAGAGCAGCTATACAG +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWHSRGQ*QRAAIQ
Trigger: CTGTATAGCTGCTCTCTGTCACTGGCCCCTGGAGTG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTCTGTCAAAACTGATCTaGAGAGAGTCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPLSKLI*RESWRL
Trigger: CAGCCTCCAGGACTCTCTGCAGATCAGTTTTGACAG...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGACCATGTCCTCACAATaGCCCGCATGGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWTMSSQ*PAWPTA
Trigger: TGCTGTGGGCCATGCGGGGCATTGTGAGGACATGGT...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCACCATGTCCTCACAATaGCCCGCATGGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALTMSSQ*PAWPTA
Trigger: TGCTGTGGGCCATGCGGGGCATTGTGAGGACATGGT...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATACCCGCCTGCAGGGTaGCCGCAGCACATTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPYPPAG*PQHIPN
Trigger: GTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTTACCCGCCTGCAGGGTaGCCGCAGCACATTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSYPPAG*PQHIPN
Trigger: GTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTA...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCCACAGATACCCGCCTaGAGGGTGCCCGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINPQIPA*RVPAAH
Trigger: ATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGCCTTTAGGCCCAGTTTaGGGGCTGCGTGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLPLGPV*GLRAPC
Trigger: ACATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGG...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGGATCATGGCCGTTCTaGTGCATTCGAAGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPGSWPF*CIRSSS
Trigger: GCTAGAACTTCGAATGCAGCAGAACGGCCATGATCC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCCCGAGATGAACTCCTaGACCCCCGAGGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRPEMNS*TPEEGS
Trigger: TGATCCCTCCTCGGGGGTGCAGGAGTTCATCTCGGG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTCCCGAGATGAACTCCTaGACCCCCGAGGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPPEMNS*TPEEGS
Trigger: TGATCCCTCCTCGGGGGTGCAGGAGTTCATCTCGGG...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCGGGCATGCTCAGCGTaGTCCCATCGATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALRACSA*SHRLAP
Trigger: TGGAGCTAATCGATGGGAGCACGCTGAGCATGCCCG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGCCCAGCGGACGGGCATaGTCAGCGTGCTCCCATCGA +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWPSGRA*SACSHR
Trigger: TCGATGGGAGCACGCTGAGCATGCCCGTCCGCTGGG...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGCCACTGTGATGAGCTaGATGAAGGCCCCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWATVMS*MKAPRG
Trigger: TCCTCGAGGGGCCTTCATGCAGCTCATCACAGTGGC...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCGCCACTGTGATGAGCTaGATGAAGGCCCCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALATVMS*MKAPRG
Trigger: TCCTCGAGGGGCCTTCATGCAGCTCATCACAGTGGC...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATCTGGGCTGCAGCCCTaGTCAGGTCACCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPSGLQP*SGHQVD
Trigger: ATCCACCTGGTGACCTGAGCAGGGCTGCAGCCCAGA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTCTGGGCTGCAGCCCTaGTCAGGTCACCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPSGLQP*SGHQVD
Trigger: ATCCACCTGGTGACCTGAGCAGGGCTGCAGCCCAGA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTTTCTCCATCTGGGCTaGAGCCCTGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWFLHLG*SPAQVT
Trigger: GGTGACCTGAGCAGGGCTGCAGCCCAGATGGAGAAA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTTTCTCCATCTGGGCTaGAGCCCTGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALFLHLG*SPAQVT
Trigger: GGTGACCTGAGCAGGGCTGCAGCCCAGATGGAGAAA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAGGCCAGGCCTGCCAGTaGCCGGAAGCCGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLGQACQ*PEAVAL
Trigger: CAGGGCGACGGCTTCCGGGCACTGGCAGGCCTGGCC...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAATGTGCCAGATGTGCTaGTTCTCAGGGTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPMCQMC*FSGSQK
Trigger: CTTCTGCGACCCTGAGAAGCAGCACATCTGGCACAT...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTATGGGAGGTGCTCCGTaGCACAGGCCTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSMGGAP*HRPGMC
Trigger: GCACATCCCAGGCCTGTGGCACGGAGCACCTCCCAT...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACCCATCAGACAGGGCTaGCCACAGCAGCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRPIRQG*PQQPPT
Trigger: TGTAGGAGGCTGCTGTGGGCAGCCCTGTCTGATGGG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGGCCATGGGAGTGCCTTaGACACCACGGGCACTCACA +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEAMGVP*TPRALT
Trigger: TGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGC...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATGGGAGTGCCTTaGACACCACGGGCACTCACA +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPAMGVP*TPRALT
Trigger: TGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGC...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAACGGTGCCATGGGAGTaGCTTGCACACCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWATVPWE*LAHHGH
Trigger: GTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCATGGAGGCTGAGTTTCTaGACCTGGTACGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPWRLSF*TWYVSR
Trigger: CCTAGAGACGTACCAGGTCCAGAAACTCAGCCTCCA...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCCAGGGCAAGTCTTTaGGAACCTGAGGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSRASL*EPEGPS
Trigger: ACTGGGCCCCTCAGGTTCCCAAAGACTTGCCCTGGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCCTTCTCCACAGGCCTaGCGTCTGGGAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINPSPQA*RLGARP
Trigger: TGGACGTGCTCCCAGACGCCAGGCCTGTGGAGAAGG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCACTGGCGTATCAGGGGTaGGCAGCTCAGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSLAYQG*AAQKRN
Trigger: ATTCCTTTTCTGAGCTGCCCACCCCTGATACGCCAG...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAGGGTCCACGGCCCACTaGAGCTGGCAGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAGSTAH*SWQNSF
Trigger: GAAGGAGTTCTGCCAGCTCCAGTGGGCCGTGGACCC...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAGCTCCCCCACGTCTGTaGTGCCCCCATGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPAPPRL*CPHALV
Trigger: GACCAAAGCATGGGGGCACCACAGACGTGGGGGAGC...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGTCACAGCCCAGGTCCTaGCTGAAGCCCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRSQPRS*LKPSAT
Trigger: AGTGGCTGAGGGCTTCAGCCAGGACCTGGGCTGTGA...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCACCCTGTTTCTCCATCTaGGCTGCAGCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPPCFSI*AAALLR
Trigger: CCTGAGCAGGGCTGCAGCCCAGATGGAGAAACAGGG...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACCCTGTTTCTCCATCTaGGCTGCAGCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRPCFSI*AAALLR
Trigger: CCTGAGCAGGGCTGCAGCCCAGATGGAGAAACAGGG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCCCTGTTTCTCCATCTaGGCTGCAGCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRPCFSI*AAALLR
Trigger: CCTGAGCAGGGCTGCAGCCCAGATGGAGAAACAGGG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTCCGTGCCACAGGCCTaGGATGTGCCAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPSVPQA*DVPDVL
Trigger: CAGCACATCTGGCACATCCCAGGCCTGTGGCACGGA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATCCGTGCCACAGGCCTaGGATGTGCCAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRSVPQA*DVPDVL
Trigger: CAGCACATCTGGCACATCCCAGGCCTGTGGCACGGA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCCAGTGAACTCTTCCTaGGCAGGGGTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEPVNSS*AGVREA
Trigger: GGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CAA 72 bp AGAGCAGCTATACAGAGGGCCCACCCCGCAGGATCCTaGACAGGAGCTGAGACAGAACAAACTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RAAIQRAHPAGS*TGAETEQTAAC
Trigger: ACAAGCAGCAGTTTGTTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGTGGGCCCTCTGTATAGCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAGCTCACATCAGAACATaGAATGTGGAGGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSAHIRT*NVEGDA
Trigger: AGCATCCCCCTCCACATTTCATGTTCTGATGTGAGC...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGCGGGCGGATTACTTaGGGTCAGGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHGGRIT*GQEFET
Trigger: AGTCTCGAACTCCTGACCTCAAGTAATCCGCCCGCC...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR TCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCGGGCCTGCAACTTCCTaGGGAAATTCCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALGPATS*GNSRAS
Trigger: ACTTGCCCTGGAATTTCCTCAGGAAGTTGCAGGCCC...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTCATTGGTGCCCAAGTTaGGGTCCCGATGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGHWCPS*GPDARS
Trigger: GCTTCTGGCATCGGGACCTCAACTTGGGCACCAATG...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATGCTTTGGTCTCAGGGTaGGAAGCGTCTCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINALVSG*EASPEA
Trigger: AGCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGC...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAGCTTTGGTCTCAGGGTaGGAAGCGTCTCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPALVSG*EASPEA
Trigger: AGCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGC...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCAGAACCACCAGCCTTaGCCGTCTCTCCAGTCGGAC +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINQNHQP*PSLQSD
Trigger: GTCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACAGAACCACCAGCCTTaGCCGTCTCTCCAGTCGGAC +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAQNHQP*PSLQSD
Trigger: GTCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTG...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGCCCAAACATGGTGTTaGGGAGTGTGGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHAQTWC*GVWTCP
Trigger: CGGGCAAGTCCACACTCCTCAACACCATGTTTGGGC...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGGCCCAAACATGGTGTTaGGGAGTGTGGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRAQTWC*GVWTCP
Trigger: CGGGCAAGTCCACACTCCTCAACACCATGTTTGGGC...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGGCCCAAACATGGTGTTaGGGAGTGTGGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLAQTWC*GVWTCP
Trigger: CGGGCAAGTCCACACTCCTCAACACCATGTTTGGGC...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCATTGCTCAGTCCCATaGGCAGAGTGGCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWHCSVP*AEWPRK
Trigger: CTTCCTTGGCCACTCTGCTCATGGGACTGAGCAATG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCATTGCTCAGTCCCATaGGCAGAGTGGCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALHCSVP*AEWPRK
Trigger: CTTCCTTGGCCACTCTGCTCATGGGACTGAGCAATG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGACCCCGCAGGATCCTTaGCAGGAGCTGAGACAGAAC +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRTPQDP*QELRQN
Trigger: GTTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGT...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCACACTCCAGGGGCCAGTaGCAGAGAGCAGCTATACAG +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPHSRGQ*QRAAIQ
Trigger: CTGTATAGCTGCTCTCTGTCACTGGCCCCTGGAGTG...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACACTCCAGGGGCCAGTaGCAGAGAGCAGCTATACAG +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRHSRGQ*QRAAIQ
Trigger: CTGTATAGCTGCTCTCTGTCACTGGCCCCTGGAGTG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGCGGGCACTCACATCTTaGATGCTGGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLRALTS*MLVHWR
Trigger: CCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCG...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTTCAGCATTGAGGGCCTaGAACTTCCTGAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPSALRA*NFLRKF
Trigger: GAATTTCCTCAGGAAGTTGCAGGCCCTCAATGCTGA...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATCAACACGAGTGGGAGTaGAAACTGGCAGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNQHEWE*KLAEGH
Trigger: ATGGCCCTCTGCCAGTTTGCACTCCCACTCGTGTTG...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGACCATGTCCTCACAATaGCCCGCATGGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLTMSSQ*PAWPTA
Trigger: TGCTGTGGGCCATGCGGGGCATTGTGAGGACATGGT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCAAGTTGAGGTCCCGATaGCAGAAGCAGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALKLRSR*QKQSHC
Trigger: GCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTT...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGTACCCGCCTGCAGGGTaGCCGCAGCACATTCCCAAC +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWYPPAG*PQHIPN
Trigger: GTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTA...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGAGTTTGCGGGCTGCGTaGGCCATGTCCTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRSLRAA*AMSSTD
Trigger: ATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACT...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAGGATCATGGCCGTTCTaGTGCATTCGAAGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSGSWPF*CIRSSS
Trigger: GCTAGAACTTCGAATGCAGCAGAACGGCCATGATCC...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCCGAGATGAACTCCTaGACCCCCGAGGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAPEMNS*TPEEGS
Trigger: TGATCCCTCCTCGGGGGTGCAGGAGTTCATCTCGGG...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCGGGCATGCTCAGCGTaGTCCCATCGATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHRACSA*SHRLAP
Trigger: TGGAGCTAATCGATGGGAGCACGCTGAGCATGCCCG...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCGGGCATGCTCAGCGTaGTCCCATCGATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRRACSA*SHRLAP
Trigger: TGGAGCTAATCGATGGGAGCACGCTGAGCATGCCCG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCTCTCCAGTCGGACGTaGAGCTCCTTCAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINLSSRT*SSFRSP
Trigger: AGGGCTCCTGAAGGAGCTGCACGTCCGACTGGAGAG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATCTGGGCTGCAGCCCTaGTCAGGTCACCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPSGLQP*SGHQVD
Trigger: ATCCACCTGGTGACCTGAGCAGGGCTGCAGCCCAGA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGTTTCTCCATCTGGGCTaGAGCCCTGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLFLHLG*SPAQVT
Trigger: GGTGACCTGAGCAGGGCTGCAGCCCAGATGGAGAAA...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTGGGATGTGCCAGATGTaGTGCTTCTCAGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGGMCQM*CFSGSQ
Trigger: CTGCGACCCTGAGAAGCAGCACATCTGGCACATCCC...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGATGTGCCAGATGTaGTGCTTCTCAGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHGMCQM*CFSGSQ
Trigger: CTGCGACCCTGAGAAGCAGCACATCTGGCACATCCC...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCACAGGCCTGGGATGTaGCAGATGTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWHRPGM*QMCCFS
Trigger: TGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCCCATCAGACAGGGCTaGCCACAGCAGCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSPIRQG*PQQPPT
Trigger: TGTAGGAGGCTGCTGTGGGCAGCCCTGTCTGATGGG...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCCATACAAACATAGAATaGAGAGTTACAGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPHTNIE*RVTAEL
Trigger: AAGTTCTGCTGTAACTCTCCATTCTATGTTTGTATG...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATCCAGGGCAAGTCTTTaGGAACCTGAGGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPSRASL*EPEGPS
Trigger: ACTGGGCCCCTCAGGTTCCCAAAGACTTGCCCTGGA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTCCAGGGCAAGTCTTTaGGAACCTGAGGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISESRASL*EPEGPS
Trigger: ACTGGGCCCCTCAGGTTCCCAAAGACTTGCCCTGGA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAAGTGGGAGTGCAAACTaGCAGAGGGCCATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPSGSAN*QRAIFN
Trigger: GTTGAAAATGGCCCTCTGCCAGTTTGCACTCCCACT...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGCACATTCCCAACGATaGCCCGGATCCTCTTCACGA +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWAHSQR*PGSSSR
Trigger: TCGTGAAGAGGATCCGGGCCATCGTTGGGAATGTGC...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGTGCCCCCATGCTTTaGTCTCAGGGTGAGAAGCGT +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHGAPML*SQGEKR
Trigger: ACGCTTCTCACCCTGAGACCAAAGCATGGGGGCACC...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGGGTGCCCCCATGCTTTaGTCTCAGGGTGAGAAGCGT +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLGAPML*SQGEKR
Trigger: ACGCTTCTCACCCTGAGACCAAAGCATGGGGGCACC...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATGCCAAGCCTGGGAAGTaGGCAAAACGCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINAKPGK*AKRLWP
Trigger: AGGCCAGAGGCGTTTTGCCCACTTCCCAGGCTTGGC...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACTCCGAGGCCAAGCCTaGGAAGTGGGCAAAACGCCT +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWALRGQA*EVGKTP
Trigger: AGGCGTTTTGCCCACTTCCCAGGCTTGGCCTCGGAG...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACTCCGAGGCCAAGCCTaGGAAGTGGGCAAAACGCCT +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPLRGQA*EVGKTP
Trigger: AGGCGTTTTGCCCACTTCCCAGGCTTGGCCTCGGAG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGCGCAGCTCTTCCCTGTaGCAAACCGCAGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLRSSSL*QTAAQT
Trigger: TGTTTGGGCTGCGGTTTGCCACAGGGAAGAGCTGCG...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTCGCAGCTCTTCCCTGTaGCAAACCGCAGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGRSSSL*QTAAQT
Trigger: TGTTTGGGCTGCGGTTTGCCACAGGGAAGAGCTGCG...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTTCACAGCCCAGGTCCTaGCTGAAGCCCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSSQPRS*LKPSAT
Trigger: AGTGGCTGAGGGCTTCAGCCAGGACCTGGGCTGTGA...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATTCTATCACCAGGATGTaGTCACAGCCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNSITRM*SQPRSW
Trigger: CCAGGACCTGGGCTGTGACCACATCCTGGTGATAGA...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCACTCCTACACCTGAACTaGGTTTCTCTGCACACTCAC +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSLLHLN*VSLHTH
Trigger: GTGAGTGTGCAGAGAAACCCAGTTCAGGTGTAGGAG...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGTAACATCTCTGAGCTaGTCTGTGAGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPVTSLS*SVRSLP
Trigger: AGGAAGTGACCTCACAGACCAGCTCAGAGATGTTAC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCCAGTGAACTCTTCCTaGGCAGGGGTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSPVNSS*AGVREA
Trigger: GGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGG...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCAGTGAACTCTTCCTaGGCAGGGGTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPPVNSS*AGVREA
Trigger: GGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCTGGGGACACAGAGCTaGAGAATGTACAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALLGTQS*RMYSPC
Trigger: GCAGGGACTGTACATTCTCCAGCTCTGTGTCCCCAG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCTGGGGACACAGAGCTaGAGAATGTACAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWLGTQS*RMYSPC
Trigger: GCAGGGACTGTACATTCTCCAGCTCTGTGTCCCCAG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGCAATGTGCCAGGCCCTaGGGACACAGAGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLQCARP*GHRAGE
Trigger: TTCTCCAGCTCTGTGTCCCCAGGGCCTGGCACATTG...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACAATGTGCCAGGCCCTaGGGACACAGAGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRQCARP*GHRAGE
Trigger: TTCTCCAGCTCTGTGTCCCCAGGGCCTGGCACATTG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGAAATGCTCGAAAACATaGTGGGCACAGGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWKCSKT*WAQEPA
Trigger: GGCTGGCTCCTGTGCCCATCATGTTTTCGAGCATTT...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAAGTGACAGCATTTCTTaGAGCCTGCTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSSDSIS*SLLLST
Trigger: AGTGGAGAGAAGCAGGCTTCAAGAAATGCTGTCACT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTGGGCCTGCAACTTCCTaGGGAAATTCCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPGPATS*GNSRAS
Trigger: ACTTGCCCTGGAATTTCCTCAGGAAGTTGCAGGCCC...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGGGGCCTGCAACTTCCTaGGGAAATTCCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEGPATS*GNSRAS
Trigger: ACTTGCCCTGGAATTTCCTCAGGAAGTTGCAGGCCC...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCCTGCAACTTCCTaGGGAAATTCCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHGPATS*GNSRAS
Trigger: ACTTGCCCTGGAATTTCCTCAGGAAGTTGCAGGCCC...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGACTTGGAGTTGCTACTaGCGTCCATGCGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISETWSCY*RPCARR
Trigger: CCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGT...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACATTGGTGCCCAAGTTaGGGTCCCGATGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPHWCPS*GPDARS
Trigger: GCTTCTGGCATCGGGACCTCAACTTGGGCACCAATG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATTTAAACTGCAGCCAGTaGGACCCGATGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNLNCSQ*DPMSPL
Trigger: GAGAGGTGACATCGGGTCTCACTGGCTGCAGTTTAA...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCACGCTGTCAGTGCTGCTaGCCTTTACCAGGACATGTG +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPRCQCC*PLPGHV
Trigger: CACATGTCCTGGTAAAGGTCAGCAGCACTGACAGCG...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCGCTGTCAGTGCTGCTaGCCTTTACCAGGACATGTG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHRCQCC*PLPGHV
Trigger: CACATGTCCTGGTAAAGGTCAGCAGCACTGACAGCG...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAGCCCAAACATGGTGTTaGGGAGTGTGGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAAQTWC*GVWTCP
Trigger: CGGGCAAGTCCACACTCCTCAACACCATGTTTGGGC...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTAAATCTGTCCCCAGCTaGCGTCAAGGCCCCACCTAT +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPKSVPS*RQGPTY
Trigger: ATAGGTGGGGCCTTGACGTCAGCTGGGGACAGATTT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCACATTGCTCAGTCCCATaGGCAGAGTGGCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPHCSVP*AEWPRK
Trigger: CTTCCTTGGCCACTCTGCTCATGGGACTGAGCAATG...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCATTGCTCAGTCCCATaGGCAGAGTGGCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRHCSVP*AEWPRK
Trigger: CTTCCTTGGCCACTCTGCTCATGGGACTGAGCAATG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAGTCTCACCAGCTCAATaGGCTGCTGGATGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPVSPAQ*AAGCFC
Trigger: ACAAAAACATCCAGCAGCTCATTGAGCTGGTGAGAC...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAACCCCGCAGGATCCTTaGCAGGAGCTGAGACAGAAC +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWATPQDP*QELRQN
Trigger: GTTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACACTCCAGGGGCCAGTaGCAGAGAGCAGCTATACAG +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPHSRGQ*QRAAIQ
Trigger: CTGTATAGCTGCTCTCTGTCACTGGCCCCTGGAGTG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACAAGTTGAGGTCCCGATaGCAGAAGCAGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHKLRSR*QKQSHC
Trigger: GCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGAAGTTGAGGTCCCGATaGCAGAAGCAGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEKLRSR*QKQSHC
Trigger: GCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTT...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGTCTGTGGTGCCCCCATaGTTTGGTCTCAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLSVVPP*FGLRVR
Trigger: TCTCACCCTGAGACCAAAGCATGGGGGCACCACAGA...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGTCTGTGGTGCCCCCATaGTTTGGTCTCAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRSVVPP*FGLRVR
Trigger: TCTCACCCTGAGACCAAAGCATGGGGGCACCACAGA...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCATTTCTCCATCTGGGCTaGAGCCCTGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAFLHLG*SPAQVT
Trigger: GGTGACCTGAGCAGGGCTGCAGCCCAGATGGAGAAA...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCACAGGCCTGGGATGTaGCAGATGTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEHRPGM*QMCCFS
Trigger: TGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTATGCGGCCATGGGAGGTaGTCCGTGCCACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLCGHGR*SVPQAW
Trigger: CCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCA...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCCATGGGAGTGCCTTaGACACCACGGGCACTCACA +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWAMGVP*TPRALT
Trigger: TGTGAGTGCCCGTGGTGTGCAAGGCACTCCCATGGC...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCATCCAGGGCAAGTCTTTaGGAACCTGAGGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWASRASL*EPEGPS
Trigger: ACTGGGCCCCTCAGGTTCCCAAAGACTTGCCCTGGA...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAAAAGGCCACAGGTTCTaGGAAAATGTCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSKGHRF*ENVQVL
Trigger: GAGGACTTGGACATTTTCCCAGAACCTGTGGCCTTT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTACGGCCCACTGGAGCTaGCAGAACTCCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSTAHWS*QNSFST
Trigger: AGTGGAGAAGGAGTTCTGCCAGCTCCAGTGGGCCGT...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAACGGCCCACTGGAGCTaGCAGAACTCCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWATAHWS*QNSFST
Trigger: AGTGGAGAAGGAGTTCTGCCAGCTCCAGTGGGCCGT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCCGAGGAGGGATCATaGCCGTTCTGCTGCATTCGA +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPPEEGS*PFCCIR
Trigger: TCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCCAAGCCTGGGAAGTaGGCAAAACGCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWAKPGK*AKRLWP
Trigger: AGGCCAGAGGCGTTTTGCCCACTTCCCAGGCTTGGC...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGCTCCGAGGCCAAGCCTaGGAAGTGGGCAAAACGCCT +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWLRGQA*EVGKTP
Trigger: AGGCGTTTTGCCCACTTCCCAGGCTTGGCCTCGGAG...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCGCAGCTCTTCCCTGTaGCAAACCGCAGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSRSSSL*QTAAQT
Trigger: TGTTTGGGCTGCGGTTTGCCACAGGGAAGAGCTGCG...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACTCTATCACCAGGATGTaGTCACAGCCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHSITRM*SQPRSW
Trigger: CCAGGACCTGGGCTGTGACCACATCCTGGTGATAGA...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTCTATCACCAGGATGTaGTCACAGCCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPSITRM*SQPRSW
Trigger: CCAGGACCTGGGCTGTGACCACATCCTGGTGATAGA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAGTAACATCTCTGAGCTaGTCTGTGAGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPVTSLS*SVRSLP
Trigger: AGGAAGTGACCTCACAGACCAGCTCAGAGATGTTAC...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCACATCTTGAATGCTaGTCCACTGGAGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSHLEC*STGGPW
Trigger: CCAAGGGCCTCCAGTGGACCAGCATTCAAGATGTGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATTCACATCTTGAATGCTaGTCCACTGGAGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNSHLEC*STGGPW
Trigger: CCAAGGGCCTCCAGTGGACCAGCATTCAAGATGTGA...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTCTGGGGACACAGAGCTaGAGAATGTACAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPLGTQS*RMYSPC
Trigger: GCAGGGACTGTACATTCTCCAGCTCTGTGTCCCCAG...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CAA 72 bp GCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTaGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: AACLPTLGAVIF*VTSLSWSVRSL
Trigger: AAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCACACCCCAGATCCATaGAACCAGAATCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHHTPDP*NQNLWE
Trigger: CTCCCAGAGATTCTGGTTTCATGGATCTGGGGTGTG...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR TCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTACTTGGAGTTGCTACTaGCGTCCATGCGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSTWSCY*RPCARR
Trigger: CCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGT...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTTAAACTGCAGCCAGTaGGACCCGATGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISELNCSQ*DPMSPL
Trigger: GAGAGGTGACATCGGGTCTCACTGGCTGCAGTTTAA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGTAGTATTTTGTGGTTaGCTCCTTCATGGAGTACAG +
Preference number: 4 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPVVFCG*LLHGVQ
Trigger: CTGTACTCCATGAAGGAGTCAACCACAAAATACTAC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAGGTAGGGACTCAGGATaGAGTAGTATTTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSGRDSG*SSILWL
Trigger: CAACCACAAAATACTACTTCATCCTGAGTCCCTACC...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCGCTGTCAGTGCTGCTaGCCTTTACCAGGACATGTG +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSRCQCC*PLPGHV
Trigger: CACATGTCCTGGTAAAGGTCAGCAGCACTGACAGCG...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATAAATCTGTCCCCAGCTaGCGTCAAGGCCCCACCTAT +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINKSVPS*RQGPTY
Trigger: ATAGGTGGGGCCTTGACGTCAGCTGGGGACAGATTT...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAAAATCTGTCCCCAGCTaGCGTCAAGGCCCCACCTAT +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPKSVPS*RQGPTY
Trigger: ATAGGTGGGGCCTTGACGTCAGCTGGGGACAGATTT...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATGCAGCCTCCTACACCTaGACTGGGTTTCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINAASYT*TGFLCT
Trigger: TGTGCAGAGAAACCCAGTTCAGGTGTAGGAGGCTGC...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGCGGGCACTCACATCTTaGATGCTGGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWRALTS*MLVHWR
Trigger: CCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCG...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAGCATTTCTTGAAGCCTaGTTCTCTCCACTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPAFLEA*FSPLLE
Trigger: TTCCAACAGTGGAGAGAAGCAGGCTTCAAGAAATGC...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCTGTCAAAACTGATCTaGAGAGAGTCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWLSKLI*RESWRL
Trigger: CAGCCTCCAGGACTCTCTGCAGATCAGTTTTGACAG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCAACACGAGTGGGAGTaGAAACTGGCAGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINQHEWE*KLAEGH
Trigger: ATGGCCCTCTGCCAGTTTGCACTCCCACTCGTGTTG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACAACACGAGTGGGAGTaGAAACTGGCAGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAQHEWE*KLAEGH
Trigger: ATGGCCCTCTGCCAGTTTGCACTCCCACTCGTGTTG...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATAAGTTGAGGTCCCGATaGCAGAAGCAGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINKLRSR*QKQSHC
Trigger: GCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTT...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACATCTCAGGTTTGTGTTaGGCTTCCCACGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHISGLC*ASHGRD
Trigger: GTCCCTACCGTGGGAAGCGCAACACAAACCTGAGAT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAGCCCAGTTTGCGGGCTaGGTGCGCCATGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLAQFAG*VRHVLH
Trigger: GTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGC...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTCATGGCCGTTCTGCTaGATTCGAAGTTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWSWPFC*IRSSSS
Trigger: GCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCATGGCCGTTCTGCTaGATTCGAAGTTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSWPFC*IRSSSS
Trigger: GCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATTCTGTGGTGCCCCCATaGTTTGGTCTCAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINSVVPP*FGLRVR
Trigger: TCTCACCCTGAGACCAAAGCATGGGGGCACCACAGA...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCCACTGTGATGAGCTaGATGAAGGCCCCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWATVMS*MKAPRG
Trigger: TCCTCGAGGGGCCTTCATGCAGCTCATCACAGTGGC...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCATGCATGCAGAATAGCTaGTGGAATGTCCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPCMQNS*WNVLGF
Trigger: GAAACCAAGGACATTCCAGCAGCTATTCTGCATGCA...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACATGTGCCAGATGTGCTaGTTCTCAGGGTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHMCQMC*FSGSQK
Trigger: CTTCTGCGACCCTGAGAAGCAGCACATCTGGCACAT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCACAGGCCTGGGATGTaGCAGATGTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINHRPGM*QMCCFS
Trigger: TGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACTCACATCTTGAATaGTGGTCCACTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRHSHLE*WSTGGP
Trigger: AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAATTCCAGCACTTTaGAAGGCTGAGGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWAIPAL*KAEAGG
Trigger: TCCGCCCGCCTCAGCCTTCCAAAGTGCTGGAATTGC...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCTGAGTTTCTGGACCTaGTACGTCTCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWLSFWT*YVSRPK
Trigger: TTTGGGCCTAGAGACGTACCAGGTCCAGAAACTCAG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCTGAGTTTCTGGACCTaGTACGTCTCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALLSFWT*YVSRPK
Trigger: TTTGGGCCTAGAGACGTACCAGGTCCAGAAACTCAG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGTGGAGGCTGAGTTTCTaGACCTGGTACGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRWRLSF*TWYVSR
Trigger: CCTAGAGACGTACCAGGTCCAGAAACTCAGCCTCCA...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCTGGCGTATCAGGGGTaGGCAGCTCAGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHLAYQG*AAQKRN
Trigger: ATTCCTTTTCTGAGCTGCCCACCCCTGATACGCCAG...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCACAATGCCCCGCATaGCCCACAGCAGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSQCPA*PTAEMY
Trigger: ATACATTTCTGCTGTGGGCCATGCGGGGCATTGTGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTACGGCGTTGAGAAGCTaGGACTTGGAGTTGCTACTG +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPTALRS*DLELLL
Trigger: CAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGACGGCGTTGAGAAGCTaGGACTTGGAGTTGCTACTG +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLTALRS*DLELLL
Trigger: CAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGACGGCGTTGAGAAGCTaGGACTTGGAGTTGCTACTG +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRTALRS*DLELLL
Trigger: CAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGT...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAACGGCGTTGAGAAGCTaGGACTTGGAGTTGCTACTG +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRTALRS*DLELLL
Trigger: CAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGT...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAACCAGGACATGTGAGTaGTCTATTTTCAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSTRTCE*SIFSTG
Trigger: TCCTGTGCTGAAAATAGACCACTCACATGTCCTGGT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAGCACATTCCCAACGATaGCCCGGATCCTCTTCACGA +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPAHSQR*PGSSSR
Trigger: TCGTGAAGAGGATCCGGGCCATCGTTGGGAATGTGC...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGACGGCCCACTGGAGCTaGCAGAACTCCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWTAHWS*QNSFST
Trigger: AGTGGAGAAGGAGTTCTGCCAGCTCCAGTGGGCCGT...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTATGGGCAAAACGCCTCTaGCCTGCCGGCAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLWAKRL*PAGSLP
Trigger: AGGGAGGCTGCCGGCAGGCCAGAGGCGTTTTGCCCA...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATGCAGAATAGCTGCTaGAATGTCCTTGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSMQNSC*NVLGFS
Trigger: GCTGAAACCAAGGACATTCCAGCAGCTATTCTGCAT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCTTCTCATGTCGATTaGGCACCAGCCATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSSHVD*APAILR
Trigger: CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTCTTCTCATGTCGATTaGGCACCAGCCATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWSSHVD*APAILR
Trigger: CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTCACATCTTGAATGCTaGTCCACTGGAGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISESHLEC*STGGPW
Trigger: CCAAGGGCCTCCAGTGGACCAGCATTCAAGATGTGA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGAAGGAGCTCACAGTCTaGGGGGACAGACATGTAAAC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWKELTV*GDRHVN
Trigger: GTTTACATGTCTGTCCCCCCAGACTGTGAGCTCCTT...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAGGAGCTCACAGTCTaGGGGGACAGACATGTAAAC +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNKELTV*GDRHVN
Trigger: GTTTACATGTCTGTCCCCCCAGACTGTGAGCTCCTT...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCTGGGGACACAGAGCTaGAGAATGTACAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSLGTQS*RMYSPC
Trigger: GCAGGGACTGTACATTCTCCAGCTCTGTGTCCCCAG...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCAGCTGTTCGTCTCTCTaGTGCTTTTATTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSCSSL*CFYFWG
Trigger: GCCCCAGAAATAAAAGCATCAGAGAGACGAACAGCT...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAAAGTCTTTGGGAACCTaGGGGGCCCAGTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRKSLGT*GAQFFI
Trigger: TATGAAGAACTGGGCCCCTCAGGTTCCCAAAGACTT...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTAAGTCTTTGGGAACCTaGGGGGCCCAGTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPKSLGT*GAQFFI
Trigger: TATGAAGAACTGGGCCCCTCAGGTTCCCAAAGACTT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGAAGTCTTTGGGAACCTaGGGGGCCCAGTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRKSLGT*GAQFFI
Trigger: TATGAAGAACTGGGCCCCTCAGGTTCCCAAAGACTT...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATTAAACTGCAGCCAGTaGGACCCGATGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPLNCSQ*DPMSPL
Trigger: GAGAGGTGACATCGGGTCTCACTGGCTGCAGTTTAA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAGTAGTATTTTGTGGTTaGCTCCTTCATGGAGTACAG +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSVVFCG*LLHGVQ
Trigger: CTGTACTCCATGAAGGAGTCAACCACAAAATACTAC...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTCGACAAGCCGTTCCTaGTGTTTTCGAGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPSTSRS*CFRVGI
Trigger: GATGCCTACTCGAAAACATCAGGAACGGCTTGTCGA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACTCGACAAGCCGTTCCTaGTGTTTTCGAGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHSTSRS*CFRVGI
Trigger: GATGCCTACTCGAAAACATCAGGAACGGCTTGTCGA...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCTGTCAAAACTGATCTaGAGAGAGTCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISELSKLI*RESWRL
Trigger: CAGCCTCCAGGACTCTCTGCAGATCAGTTTTGACAG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTCAGCATTGAGGGCCTaGAACTTCCTGAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWSALRA*NFLRKF
Trigger: GAATTTCCTCAGGAAGTTGCAGGCCCTCAATGCTGA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAATCTCAGGTTTGTGTTaGGCTTCCCACGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPISGLC*ASHGRD
Trigger: GTCCCTACCGTGGGAAGCGCAACACAAACCTGAGAT...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTATCTCAGGTTTGTGTTaGGCTTCCCACGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSISGLC*ASHGRD
Trigger: GTCCCTACCGTGGGAAGCGCAACACAAACCTGAGAT...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTCATGGCCGTTCTGCTaGATTCGAAGTTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPSWPFC*IRSSSS
Trigger: GCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGCACAGGCCTGGGATGTaGCAGATGTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWHRPGM*QMCCFS
Trigger: TGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTG...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAATGGGAGGTGCTCCGTaGCACAGGCCTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLMGGAP*HRPGMC
Trigger: GCACATCCCAGGCCTGTGGCACGGAGCACCTCCCAT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAAGCAAGGCCTACTTCTaGTTCCTCAGGACAACTTCC +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPSKAYF*FLRTTS
Trigger: GGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCT...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAAGCAAGGCCTACTTCTaGTTCCTCAGGACAACTTCC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRSKAYF*FLRTTS
Trigger: GGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCT...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCACTCACATCTTGAATaGTGGTCCACTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSHSHLE*WSTGGP
Trigger: AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTG...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAGAGGTATAACAAAGTaGTGTGGGGCACAACAGAGC +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNRGITK*CGAQQS
Trigger: GCTCTGTTGTGCCCCACAGCACTTTGTTATACCTCT...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGACACTGTTGTGGCAATaGGCATGCCTAGCACCCTTT +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLTLLWQ*ACLAPF
Trigger: AAAGGGTGCTAGGCATGCCCATTGCCACAACAGTGT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCTGAGTTTCTGGACCTaGTACGTCTCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISELSFWT*YVSRPK
Trigger: TTTGGGCCTAGAGACGTACCAGGTCCAGAAACTCAG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTTGGAGGCTGAGTTTCTaGACCTGGTACGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSWRLSF*TWYVSR
Trigger: CCTAGAGACGTACCAGGTCCAGAAACTCAGCCTCCA...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAGTGGGAGTGCAAACTaGCAGAGGGCCATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGSGSAN*QRAIFN
Trigger: GTTGAAAATGGCCCTCTGCCAGTTTGCACTCCCACT...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTGGGAGTGCAAACTaGCAGAGGGCCATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLSGSAN*QRAIFN
Trigger: GTTGAAAATGGCCCTCTGCCAGTTTGCACTCCCACT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATCACAATGCCCCGCATaGCCCACAGCAGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRSQCPA*PTAEMY
Trigger: ATACATTTCTGCTGTGGGCCATGCGGGGCATTGTGA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTCACAATGCCCCGCATaGCCCACAGCAGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGSQCPA*PTAEMY
Trigger: ATACATTTCTGCTGTGGGCCATGCGGGGCATTGTGA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATCACAATGCCCCGCATaGCCCACAGCAGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPSQCPA*PTAEMY
Trigger: ATACATTTCTGCTGTGGGCCATGCGGGGCATTGTGA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTACGAAGGCGGGCGCCCTaGACAAGACCACGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLRRRAP*TRPRCL
Trigger: AAGACAGCGTGGTCTTGTCCAGGGCGCCCGCCTTCG...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAGGGTCCACGGCCCACTaGAGCTGGCAGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLGSTAH*SWQNSF
Trigger: GAAGGAGTTCTGCCAGCTCCAGTGGGCCGTGGACCC...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTCTCCTACACCTGAACTaGGTTTCTCTGCACACTCAC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGLLHLN*VSLHTH
Trigger: GTGAGTGTGCAGAGAAACCCAGTTCAGGTGTAGGAG...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCTCCTACACCTGAACTaGGTTTCTCTGCACACTCAC +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRLLHLN*VSLHTH
Trigger: GTGAGTGTGCAGAGAAACCCAGTTCAGGTGTAGGAG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTCTTCTCATGTCGATTaGGCACCAGCCATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISESSHVD*APAILR
Trigger: CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTATAAATACGGTGCCATaGGAGTGCCTTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGINTVP*ECLAHH
Trigger: GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTAT...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACATAAATACGGTGCCATaGGAGTGCCTTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHINTVP*ECLAHH
Trigger: GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTAT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAATAAATACGGTGCCATaGGAGTGCCTTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPINTVP*ECLAHH
Trigger: GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTAT...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGAAGGAGCTCACAGTCTaGGGGGACAGACATGTAAAC +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRKELTV*GDRHVN
Trigger: GTTTACATGTCTGTCCCCCCAGACTGTGAGCTCCTT...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAGAACAGGAGGAGCCTaGGCATCTTATTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNRTGGA*ASYFRK
Trigger: CTTTCTGAAATAAGATGCTCAGGCTCCTCCTGTTCT...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTAGCTGTTCGTCTCTCTaGTGCTTTTATTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPSCSSL*CFYFWG
Trigger: GCCCCAGAAATAAAAGCATCAGAGAGACGAACAGCT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAAGCTGTTCGTCTCTCTaGTGCTTTTATTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPSCSSL*CFYFWG
Trigger: GCCCCAGAAATAAAAGCATCAGAGAGACGAACAGCT...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCATACTGTCAAAACTaGTCTGCAGAGAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSYCQN*SAESPG
Trigger: TCCAGGACTCTCTGCAGATCAGTTTTGACAGTATGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGGTCTCACCAGCTCAATaGGCTGCTGGATGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLVSPAQ*AAGCFC
Trigger: ACAAAAACATCCAGCAGCTCATTGAGCTGGTGAGAC...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTACAACAGAGCGACCAGTaGACTCTTCCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLQQSDQ*TLPGQG
Trigger: CCCCTGCCCAGGAAGAGTTCACTGGTCGCTCTGTTG...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACAGACATGTAAACACATaGGTTACAACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHRHVNT*VTTRCV
Trigger: CACGCAGCGCGTTGTAACTCATGTGTTTACATGTCT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAAGACATGTAAACACATaGGTTACAACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRRHVNT*VTTRCV
Trigger: CACGCAGCGCGTTGTAACTCATGTGTTTACATGTCT...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTAGACATGTAAACACATaGGTTACAACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPRHVNT*VTTRCV
Trigger: CACGCAGCGCGTTGTAACTCATGTGTTTACATGTCT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTCTCCATTCCAAATCTaGAATGGCCACAGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISESPFQI*NGHSCS
Trigger: CGAACAGCTGTGGCCATTGCAGATTTGGAATGGAGA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTCTCCATTCCAAATCTaGAATGGCCACAGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGSPFQI*NGHSCS
Trigger: CGAACAGCTGTGGCCATTGCAGATTTGGAATGGAGA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCGCATTTCTTGAAGCCTaGTTCTCTCCACTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALAFLEA*FSPLLE
Trigger: TTCCAACAGTGGAGAGAAGCAGGCTTCAAGAAATGC...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACTGTCAAAACTGATCTaGAGAGAGTCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPLSKLI*RESWRL
Trigger: CAGCCTCCAGGACTCTCTGCAGATCAGTTTTGACAG...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATCAGCATTGAGGGCCTaGAACTTCCTGAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRSALRA*NFLRKF
Trigger: GAATTTCCTCAGGAAGTTGCAGGCCCTCAATGCTGA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTACCTTTAGGCCCAGTTTaGGGGCTGCGTGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLPLGPV*GLRAPC
Trigger: ACATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGG...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATTGCATGCAGAATAGCTaGTGGAATGTCCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNCMQNS*WNVLGF
Trigger: GAAACCAAGGACATTCCAGCAGCTATTCTGCATGCA...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTAGAGGTATAACAAAGTaGTGTGGGGCACAACAGAGC +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPRGITK*CGAQQS
Trigger: GCTCTGTTGTGCCCCACAGCACTTTGTTATACCTCT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAAGAATCTCTGGGAGCTaGTCCTGGGTATCACTGCTT +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWARISGS*SWVSLL
Trigger: AAGCAGTGATACCCAGGACCAGCTCCCAGAGATTCT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGCTGGCGTATCAGGGGTaGGCAGCTCAGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWLAYQG*AAQKRN
Trigger: ATTCCTTTTCTGAGCTGCCCACCCCTGATACGCCAG...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTAGTGGGAGTGCAAACTaGCAGAGGGCCATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSSGSAN*QRAIFN
Trigger: GTTGAAAATGGCCCTCTGCCAGTTTGCACTCCCACT...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAAAGGCCACAGGTTCTaGGAAAATGTCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLKGHRF*ENVQVL
Trigger: GAGGACTTGGACATTTTCCCAGAACCTGTGGCCTTT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAAAAGGCCACAGGTTCTaGGAAAATGTCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRKGHRF*ENVQVL
Trigger: GAGGACTTGGACATTTTCCCAGAACCTGTGGCCTTT...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCACCAGGACATGTGAGTaGTCTATTTTCAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALTRTCE*SIFSTG
Trigger: TCCTGTGCTGAAAATAGACCACTCACATGTCCTGGT...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAGCCAAGCCTGGGAAGTaGGCAAAACGCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLAKPGK*AKRLWP
Trigger: AGGCCAGAGGCGTTTTGCCCACTTCCCAGGCTTGGC...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTATCACAGCCCAGGTCCTaGCTGAAGCCCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLSQPRS*LKPSAT
Trigger: AGTGGCTGAGGGCTTCAGCCAGGACCTGGGCTGTGA...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTATCCGTGCCACAGGCCTaGGATGTGCCAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLSVPQA*DVPDVL
Trigger: CAGCACATCTGGCACATCCCAGGCCTGTGGCACGGA...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATCTCCTACACCTGAACTaGGTTTCTCTGCACACTCAC +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINLLHLN*VSLHTH
Trigger: GTGAGTGTGCAGAGAAACCCAGTTCAGGTGTAGGAG...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGTAACATCTCTGAGCTaGTCTGTGAGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPVTSLS*SVRSLP
Trigger: AGGAAGTGACCTCACAGACCAGCTCAGAGATGTTAC...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGGTAACATCTCTGAGCTaGTCTGTGAGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEVTSLS*SVRSLP
Trigger: AGGAAGTGACCTCACAGACCAGCTCAGAGATGTTAC...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAATAAATACGGTGCCATaGGAGTGCCTTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAINTVP*ECLAHH
Trigger: GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTAT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAAGTGACAGCATTTCTTaGAGCCTGCTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWASDSIS*SLLLST
Trigger: AGTGGAGAGAAGCAGGCTTCAAGAAATGCTGTCACT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACTCATACTGTCAAAACTaGTCTGCAGAGAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHSYCQN*SAESPG
Trigger: TCCAGGACTCTCTGCAGATCAGTTTTGACAGTATGA...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTACATTGGTGCCCAAGTTaGGGTCCCGATGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLHWCPS*GPDARS
Trigger: GCTTCTGGCATCGGGACCTCAACTTGGGCACCAATG...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTGGTAGGGACTCAGGATaGAGTAGTATTTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPGRDSG*SSILWL
Trigger: CAACCACAAAATACTACTTCATCCTGAGTCCCTACC...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATGTCTCACCAGCTCAATaGGCTGCTGGATGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINVSPAQ*AAGCFC
Trigger: ACAAAAACATCCAGCAGCTCATTGAGCTGGTGAGAC...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTAGACATGTAAACACATaGGTTACAACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSRHVNT*VTTRCV
Trigger: CACGCAGCGCGTTGTAACTCATGTGTTTACATGTCT...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATACGAGTGTACACATaGATCTATTTCCTAACTGTC +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSIRVYT*IYFLTV
Trigger: GACAGTTAGGAAATAGATGCATGTGTACACTCGTAT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR GCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAGCATTTCTTGAAGCCTaGTTCTCTCCACTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRAFLEA*FSPLLE
Trigger: TTCCAACAGTGGAGAGAAGCAGGCTTCAAGAAATGC...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTTCAGCATTGAGGGCCTaGAACTTCCTGAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSSALRA*NFLRKF
Trigger: GAATTTCCTCAGGAAGTTGCAGGCCCTCAATGCTGA...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGAGCAAGGCCTACTTCTaGTTCCTCAGGACAACTTCC +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWSKAYF*FLRTTS
Trigger: GGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCT...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTAGAGGTATAACAAAGTaGTGTGGGGCACAACAGAGC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSRGITK*CGAQQS
Trigger: GCTCTGTTGTGCCCCACAGCACTTTGTTATACCTCT...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATAGAGGTATAACAAAGTaGTGTGGGGCACAACAGAGC +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINRGITK*CGAQQS
Trigger: GCTCTGTTGTGCCCCACAGCACTTTGTTATACCTCT...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACAATCTGAATGCCCTTTaGCCAGTAATTCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHNLNAL*PVIPLP
Trigger: CGGAAGTGGAATTACTGGGCAAAGGGCATTCAGATT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443736.5
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCATCAGAACATGAAATGTaGAGGGGGATGCTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWASEHEM*RGMLQS
Trigger: TGACTGCAGCATCCCCCTCCACATTTCATGTTCTGA...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAATCCTGAATGATGGCTaGGGCAAGGAAAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAILNDG*GKERTG
Trigger: TCCTGTTCTTTCCTTGCCCCAGCCATCATTCAGGAT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCTGAAGTTAACACTGTaGTCTGGAAGGGGTGATCCT +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSLKLTL*SGRGDP
Trigger: AGGATCACCCCTTCCAGACCACAGTGTTAACTTCAG...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTCTGGGAGCTGGTCCTaGGTATCACTGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPSGSWS*VSLLLK
Trigger: TTTTAAAAGCAGTGATACCCAGGACCAGCTCCCAGA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTATTCCAAATCTGCAATaGCCACAGCTGTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGIPNLQ*PQLFVS
Trigger: AGAGACGAACAGCTGTGGCCATTGCAGATTTGGAAT...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTATTCCAAATCTGCAATaGCCACAGCTGTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPIPNLQ*PQLFVS
Trigger: AGAGACGAACAGCTGTGGCCATTGCAGATTTGGAAT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACATTCCAAATCTGCAATaGCCACAGCTGTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHIPNLQ*PQLFVS
Trigger: AGAGACGAACAGCTGTGGCCATTGCAGATTTGGAAT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGCTTCTCTCCACTGTTaGAAAATCATTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHASLHC*KIIVLS
Trigger: GCTCAGGACAATGATTTTCCAACAGTGGAGAGAAGC...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGGCTTCTCTCCACTGTTaGAAAATCATTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRASLHC*KIIVLS
Trigger: GCTCAGGACAATGATTTTCCAACAGTGGAGAGAAGC...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCATGGTTGACTCCTTCATaGAGTACAGCAATTTGTATT +
Preference number: 4 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSWLTPS*STAICI
Trigger: AATACAAATTGCTGTACTCCATGAAGGAGTCAACCA...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGACCAGGACATGTGAGTaGTCTATTTTCAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRTRTCE*SIFSTG
Trigger: TCCTGTGCTGAAAATAGACCACTCACATGTCCTGGT...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTACCCGAGGAGGGATCATaGCCGTTCTGCTGCATTCGA +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLPEEGS*PFCCIR
Trigger: TCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGG...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGATGCAGAATAGCTGCTaGAATGTCCTTGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLMQNSC*NVLGFS
Trigger: GCTGAAACCAAGGACATTCCAGCAGCTATTCTGCAT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAATGCAGAATAGCTGCTaGAATGTCCTTGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPMQNSC*NVLGFS
Trigger: GCTGAAACCAAGGACATTCCAGCAGCTATTCTGCAT...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTGGATGTTTTTGTTTTaGTTCGACAAGCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WAGVREAFTDQSINTVPWWMFLF*FDKPFL
Trigger: CAGGAACGGCTTGTCGAACCAAAACAAAAACATCCA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGTCTTCTCATGTCGATTaGGCACCAGCCATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWSSHVD*APAILR
Trigger: CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGA...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGAGTGACAGCATTTCTTaGAGCCTGCTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWSDSIS*SLLLST
Trigger: AGTGGAGAGAAGCAGGCTTCAAGAAATGCTGTCACT...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAACTTGGAGTTGCTACTaGCGTCCATGCGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLTWSCY*RPCARR
Trigger: CCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGTAGTATTTTGTGGTTaGCTCCTTCATGGAGTACAG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHVVFCG*LLHGVQ
Trigger: CTGTACTCCATGAAGGAGTCAACCACAAAATACTAC...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATGGTAGGGACTCAGGATaGAGTAGTATTTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINGRDSG*SSILWL
Trigger: CAACCACAAAATACTACTTCATCCTGAGTCCCTACC...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAGCATTTCTTGAAGCCTaGTTCTCTCCACTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAAFLEA*FSPLLE
Trigger: TTCCAACAGTGGAGAGAAGCAGGCTTCAAGAAATGC...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTTGCATGCAGAATAGCTaGTGGAATGTCCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSCMQNS*WNVLGF
Trigger: GAAACCAAGGACATTCCAGCAGCTATTCTGCATGCA...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATTGCATGCAGAATAGCTaGTGGAATGTCCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINCMQNS*WNVLGF
Trigger: GAAACCAAGGACATTCCAGCAGCTATTCTGCATGCA...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACACCAGCTCAATGAGCTaGTGGATGTTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AFTDQSINTVPWECLAHHTSSMS*WMFLFW
Trigger: CCAAAACAAAAACATCCAGCAGCTCATTGAGCTGGT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGACCAGCTCAATGAGCTaGTGGATGTTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISETSSMS*WMFLFW
Trigger: CCAAAACAAAAACATCCAGCAGCTCATTGAGCTGGT...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAACCAGCTCAATGAGCTaGTGGATGTTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPTSSMS*WMFLFW
Trigger: CCAAAACAAAAACATCCAGCAGCTCATTGAGCTGGT...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAACAGTTGAGAAACACTaGTCTAGAAAACCAGCACTC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRTVEKH*SRKPAL
Trigger: GAGTGCTGGTTTTCTAGACCAGTGTTTCTCAACTGT...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAGCTTCTCTCCACTGTTaGAAAATCATTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPASLHC*KIIVLS
Trigger: GCTCAGGACAATGATTTTCCAACAGTGGAGAGAAGC...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAGCTTCTCTCCACTGTTaGAAAATCATTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAASLHC*KIIVLS
Trigger: GCTCAGGACAATGATTTTCCAACAGTGGAGAGAAGC...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTGGATGTTTTTGTTTTaGTTCGACAAGCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEWMFLF*FDKPFL
Trigger: CAGGAACGGCTTGTCGAACCAAAACAAAAACATCCA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGGTGCTAACTAACTGCTaGAGAAAGGACATACAAACA +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEVLTNC*RKDIQT
Trigger: TGTTTGTATGTCCTTTCTTCAGCAGTTAGTTAGCAC...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR TCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTCAAAAAGATGCTGGATaGGATATTAGGGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPQKDAG*DIRESC
Trigger: ACAGCTTTCCCTAATATCTCATCCAGCATCTTTTTG...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR TCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTATTAAACTGCAGCCAGTaGGACCCGATGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLLNCSQ*DPMSPL
Trigger: GAGAGGTGACATCGGGTCTCACTGGCTGCAGTTTAA...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTGTAGTATTTTGTGGTTaGCTCCTTCATGGAGTACAG +
Preference number: 4 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSVVFCG*LLHGVQ
Trigger: CTGTACTCCATGAAGGAGTCAACCACAAAATACTAC...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGGCAAGGGAGCTCTCTaGAGTGCAGTTTTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWGKGAL*SAVFEN
Trigger: ATTTTCAAAAACTGCACTGCAGAGAGCTCCCTTGCC...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR GCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAAAGAGAAGGCTCTCTTaGTCACATCAGAACATGAAA +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPKRRLS*SHQNMK
Trigger: TTTCATGTTCTGATGTGAGCAAGAGAGCCTTCTCTT...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAATGTGCCAGATGTGCTaGTTCTCAGGGTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLMCQMC*FSGSQK
Trigger: CTTCTGCGACCCTGAGAAGCAGCACATCTGGCACAT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTACACTCACATCTTGAATaGTGGTCCACTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLHSHLE*WSTGGP
Trigger: AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTG...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATAAAAACTATAAACCCTaGGTCACACCCCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINKNYKP*VTPQIH
Trigger: ATGGATCTGGGGTGTGACCCAGGGTTTATAGTTTTT...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATCTTCAATTCAAATATaGCTTCACTGTAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRSSIQI*LHCRPS
Trigger: GCTTGGCCTACAGTGAAGCCATATTTGAATTGAAGA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGTCTTCAATTCAAATATaGCTTCACTGTAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLSSIQI*LHCRPS
Trigger: GCTTGGCCTACAGTGAAGCCATATTTGAATTGAAGA...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATCTTCAATTCAAATATaGCTTCACTGTAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPSSIQI*LHCRPS
Trigger: GCTTGGCCTACAGTGAAGCCATATTTGAATTGAAGA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATGGATGTTTTTGTTTTaGTTCGACAAGCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPWMFLF*FDKPFL
Trigger: CAGGAACGGCTTGTCGAACCAAAACAAAAACATCCA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
3UTR CAA 72 bp AGCTGGTCTGTGAGGTCACTTCCTCTTTTAACACTGTaGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SWSVRSLPLLTL*RRLQTLSFPRL
Trigger: AAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGTGTTAAAAGAGGAAGTGACCTCACAGACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAAGCAAGGCCTACTTCTaGTTCCTCAGGACAACTTCC +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLSKAYF*FLRTTS
Trigger: GGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTGCT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAGCAATAACGGAATTATaGTCAAATTCTGCAGCCATT +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRAITEL*SNSAAI
Trigger: AATGGCTGCAGAATTTGACCATAATTCCGTTATTGC...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTGGTTGACTCCTTCATaGAGTACAGCAATTTGTATT +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEWLTPS*STAICI
Trigger: AATACAAATTGCTGTACTCCATGAAGGAGTCAACCA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATGGTTGACTCCTTCATaGAGTACAGCAATTTGTATT +
Preference number: 4 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRWLTPS*STAICI
Trigger: AATACAAATTGCTGTACTCCATGAAGGAGTCAACCA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATTCTTCAATTCAAATATaGCTTCACTGTAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: VNSSWAGVREAFTDQSINSSIQI*LHCRPS
Trigger: GCTTGGCCTACAGTGAAGCCATATTTGAATTGAAGA...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAAGTGACAGCATTTCTTaGAGCCTGCTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLSDSIS*SLLLST
Trigger: AGTGGAGAGAAGCAGGCTTCAAGAAATGCTGTCACT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR TCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAGTCTCACCAGCTCAATaGGCTGCTGGATGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLVSPAQ*AAGCFC
Trigger: ACAAAAACATCCAGCAGCTCATTGAGCTGGTGAGAC...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTATGGATTTCTTTTGTaGACAAAAAGATGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPYGFLL*TKRCWM
Trigger: CATCCAGCATCTTTTTGTCCACAAAAGAAATCCATA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTTTCACCTATCAAACTaGCCGCATATAAAATCTCTT +
Preference number: 4 (lower is better)
Translates to: CCLSPYPGGCDILGNISEFHLSN*PHIKSL
Trigger: AAGAGATTTTATATGCGGCCAGTTTGATAGGTGAAA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CCA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATGGTTGACTCCTTCATaGAGTACAGCAATTTGTATT +
Preference number: 4 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPWLTPS*STAICI
Trigger: AATACAAATTGCTGTACTCCATGAAGGAGTCAACCA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAATTCCAAATCTGCAATaGCCACAGCTGTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLIPNLQ*PQLFVS
Trigger: AGAGACGAACAGCTGTGGCCATTGCAGATTTGGAAT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAACCAGGACATGTGAGTaGTCTATTTTCAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLTRTCE*SIFSTG
Trigger: TCCTGTGCTGAAAATAGACCACTCACATGTCCTGGT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAATGCAGAATAGCTGCTaGAATGTCCTTGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLMQNSC*NVLGFS
Trigger: GCTGAAACCAAGGACATTCCAGCAGCTATTCTGCAT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAACCAGCTCAATGAGCTaGTGGATGTTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLTSSMS*WMFLFW
Trigger: CCAAAACAAAAACATCCAGCAGCTCATTGAGCTGGT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR GCA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAAATCTGAATGCCCTTTaGCCAGTAATTCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLNLNAL*PVIPLL
Trigger: TAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATT...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453200.6
CDS TCA 90 bp GCGGCTCCCCCACGTCTGTGGTGCCCCCATGCTTTGGTCTCAGGGTaGGAAGCGTCTCCGGAGGCTGTCTCAGTCGCGGCTGGGCCACCC +
Preference number: 5 (lower is better)
Translates to: AAPPRLWCPHALVSG*EASPEAVSVAAGPP
Trigger: GGGTGGCCCAGCCGCGACTGAGACAGCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGCATGGGGGCACCACAGACGTGGGGGAGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 90 bp AAGCCAACGAGCCCCTCCTCTTCGCTGGCCTCTCCGGGGCCTTGCTaGCTAGTGGTCGAAGCCACAGGACCAGGTGCGGGTGGCCAGCGT +
Preference number: 5 (lower is better)
Translates to: KPTSPSSSLASPGPC*LVVEATGPGAGGQR
Trigger: ACGCTGGCCACCCGCACCTGGTCCTGTGGCTTCGACCACTAGTCAGCAAGGCCCCGGAGAGGCCAGCGAAGAGGAGGGGCTCGTTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426198.5
ENST00000455877.5
ENST00000477768.1
CDS GCA 90 bp CTCACTGCGGCCATGGGAGGTGCTCCGTGCCACAGGCCTGGGATGTaGCAGATGTGCTGCTTCTCAGGGTCGCAGAAGGCCAGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LTAAMGGAPCHRPGM*QMCCFSGSQKARPA
Trigger: GGCAGGCCTGGCCTTCTGCGACCCTGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCAGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 90 bp CTCAGGCCAGAGCGGCTCCCCCACGTCTGTGGTGCCCCCATGCTTTaGTCTCAGGGTGAGAAGCGTCTCCGGAGGCTGTCTCAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: LRPERLPHVCGAPML*SQGEKRLRRLSQSR
Trigger: CCGCGACTGAGACAGCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGCATGGGGGCACCACAGACGTGGGGGAGCCGCTCTGGCCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS-3UTR CAA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCTCCAGGAGCTGTCTCTaGTCTCTGGGCCTAGGGCCG +
Preference number: 5 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPSRSCL*SLGLGP
Trigger: CGGCCCTAGGCCCAGAGACAAGAGACAGCTCCTGGA...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS GCA 90 bp CCATCCGAAATCTCCCGGGCATTGGTGCCCAAGTTGAGGTCCCGATaGCAGAAGCAGTCCCACTGCCTGTGGCCCGGGCTGAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: PSEISRALVPKLRSR*QKQSHCLWPGLRTA
Trigger: CGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGCCCGGGAGATTTCGGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp GCGGGCTGCGTGCGCCATGTCCTCCACAGATACCCGCCTGCAGGGTaGCCGCAGCACATTCCCAACGATGGCCCGGATCCTCTTCACGAA +
Preference number: 5 (lower is better)
Translates to: AGCVRHVLHRYPPAG*PQHIPNDGPDPLHE
Trigger: TTCGTGAAGAGGATCCGGGCCATCGTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGGAGGACATGGCGCACGCAGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp CCAGTTTGCGGGCTGCGTGCGCCATGTCCTCCACAGATACCCGCCTaGAGGGTGCCCGCAGCACATTCCCAACGATGGCCCGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: PVCGLRAPCPPQIPA*RVPAAHSQRWPGSS
Trigger: AGAGGATCCGGGCCATCGTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp TCCTCACAGTCCTCGTCGACCTTTAGGCCCAGTTTGCGGGCTGCGTaGGCCATGTCCTCCACAGATACCCGCCTGCAGGGTGCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SSQSSSTFRPSLRAA*AMSSTDTRLQGARS
Trigger: GCTGCGGGCACCCTGCAGGCGGGTATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGTCGACGAGGACTGTGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp CCAGATGTGCTGCTTCTCAGGGTCGCAGAAGGCCAGGCCTGCCAGTaGCCGGAAGCCGTCGCCCTGTTTCTCCATCTGGGCTGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PDVLLLRVAEGQACQ*PEAVALFLHLGCSP
Trigger: AGGGCTGCAGCCCAGATGGAGAAACAGGGCGACGGCTTCCGGGCACTGGCAGGCCTGGCCTTCTGCGACCCTGAGAAGCAGCACATCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp ATGGGAGGTGCTCCGTGCCACAGGCCTGGGATGTGCCAGATGTGCTaGTTCTCAGGGTCGCAGAAGGCCAGGCCTGCCAGTGCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: MGGAPCHRPGMCQMC*FSGSQKARPASARK
Trigger: CTTCCGGGCACTGGCAGGCCTGGCCTTCTGCGACCCTGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 90 bp GGCCAAGCTCACTGCGGCCATGGGAGGTGCTCCGTGCCACAGGCCTaGGATGTGCCAGATGTGCTGCTTCTCAGGGTCGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: GQAHCGHGRCSVPQA*DVPDVLLLRVAEGQ
Trigger: CTGGCCTTCTGCGACCCTGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCTTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp GTCCACGGCCCACTGGAGCTGGCAGAACTCCTTCTCCACTTGGGCTaGCTTTCTCCAGGGGTCCCCCTGCAGCCTCAGCTCGTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VHGPLELAELLLHLG*LSPGVPLQPQLVPS
Trigger: AGAAGGGACGAGCTGAGGCTGCAGGGGGACCCCTGGAGAAAGGCAGCCCAAGTGGAGAAGGAGTTCTGCCAGCTCCAGTGGGCCGTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp GAGAAGCGTCTCCGGAGGCTGTCTCAGTCGCGGCTGGGCCACCCGTaGCAGGCCCCACTCCATCCACCTCAGGAAGTACTGCTTCTCACT +
Preference number: 5 (lower is better)
Translates to: EKRLRRLSQSRLGHP*QAPLHPPQEVLLLT
Trigger: AGTGAGAAGCAGTACTTCCTGAGGTGGATGGAGTGGGGCCTGGCACGGGTGGCCCAGCCGCGACTGAGACAGCCTCCGGAGACGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp CAGCTCCGAGGCCAAGCCTGGGAAGTGGGCAAAACGCCTCTGGCCTaGCGGCAGCCTCCCTGCCTCCACAAGACAGCTCTCAGCCTCATA +
Preference number: 5 (lower is better)
Translates to: QLRGQAWEVGKTPLA*RQPPCLHKTALSLI
Trigger: TATGAGGCTGAGAGCTGTCTTGTGGAGGCAGGGAGGCTGCCGGCAGGCCAGAGGCGTTTTGCCCACTTCCCAGGCTTGGCCTCGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp GATGTGCCAGATGTGCTGCTTCTCAGGGTCGCAGAAGGCCAGGCCTaGCAGTGCCCGGAAGCCGTCGCCCTGTTTCTCCATCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: DVPDVLLLRVAEGQA*QCPEAVALFLHLGC
Trigger: GCAGCCCAGATGGAGAAACAGGGCGACGGCTTCCGGGCACTGGCAGGCCTGGCCTTCTGCGACCCTGAGAAGCAGCACATCTGGCACATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS-3UTR CAA 90 bp TCTCAGGCACCAGAGCACAGCCCCACACGGGTGCCCCATCAGACAGGGCTGCCCACAGAACCACCAGCCTaGACCGTCTCTCCAGTCGGA +
Preference number: 5 (lower is better)
Translates to: SQAPEHSPTRVPHQTGLPTEPPA*TVSPVG
Trigger: TCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTGT...GGGCAGCCCTGTCTGATGGGGCACCCGTGTGGGGCTGTGCTCTGGTGCCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS GCA 90 bp GCATTGGTGCCCAAGTTGAGGTCCCGATGCCAGAAGCAGTCCCACTaGCTGTGGCCCGGGCTGAGGACGGCGTTGAGAAGCTGGGACTTG +
Preference number: 5 (lower is better)
Translates to: ALVPKLRSRCQKQSH*LWPGLRTALRSWDL
Trigger: CAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp CCCGAGATGAACTCCTGCACCCCCGAGGAGGGATCATGGCCGTTCTaGTGCATTCGAAGTTCTAGCAGCCGCCGCCTCAGCTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: PEMNSCTPEEGSWPF*CIRSSSSRRLSSAL
Trigger: CAGGGCTGAGCTGAGGCGGCGGCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGGGGTGCAGGAGTTCATCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp ACGGTTGACAGAACCACCAGCCTTGACCGTCTCTCCAGTCGGACGTaGAGCTCCTTCAGGAGCCCTGTGACCCAGCGGACGGGCATGCTC +
Preference number: 5 (lower is better)
Translates to: TVDRTTSLDRLSSRT*SSFRSPVTQRTGML
Trigger: GAGCATGCCCGTCCGCTGGGTCACAGGGCTCCTGAAGGAGCTGCACGTCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTGTCAACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp GTGCCCGGAAGCCGTCGCCCTGTTTCTCCATCTGGGCTGCAGCCCTaGTCAGGTCACCAGGTGGATCCAGGAGCTGTCTCTTGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VPGSRRPVSPSGLQP*SGHQVDPGAVSCLW
Trigger: CCAGAGACAAGAGACAGCTCCTGGATCCACCTGGTGACCTGAGCAGGGCTGCAGCCCAGATGGAGAAACAGGGCGACGGCTTCCGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 90 bp CAGTCCCACTGCCTGTGGCCCGGGCTGAGGACGGCGTTGAGAAGCTaGGACTTGGAGTTGCTACTGACGTCCATGCGCACGAAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: QSHCLWPGLRTALRS*DLELLLTSMRTKAK
Trigger: CTTCGCCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 90 bp GTGCCCAAGTTGAGGTCCCGATGCCAGAAGCAGTCCCACTGCCTGTaGCCCGGGCTGAGGACGGCGTTGAGAAGCTGGGACTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: VPKLRSRCQKQSHCL*PGLRTALRSWDLEL
Trigger: CAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 90 bp GCCCTGTTTCTCCATCTGGGCTGCAGCCCTGCTCAGGTCACCAGGTaGATCCAGGAGCTGTCTCTTGTCTCTGGGCCTAGGGCCGGGAAC +
Preference number: 5 (lower is better)
Translates to: ALFLHLGCSPAQVTR*IQELSLVSGPRAGN
Trigger: GTTCCCGGCCCTAGGCCCAGAGACAAGAGACAGCTCCTGGATCCACCTGGTGACCTGAGCAGGGCTGCAGCCCAGATGGAGAAACAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 90 bp TTGACCGTCTCTCCAGTCGGACGTGCAGCTCCTTCAGGAGCCCTGTaGCCCAGCGGACGGGCATGCTCAGCGTGCTCCCATCGATTAGCT +
Preference number: 5 (lower is better)
Translates to: LTVSPVGRAAPSGAL*PSGRACSACSHRLA
Trigger: AGCTAATCGATGGGAGCACGCTGAGCATGCCCGTCCGCTGGGTCACAGGGCTCCTGAAGGAGCTGCACGTCCGACTGGAGAGACGGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 90 bp GACCGCAGCTCTTCCCTGTGGCAAACCGCAGCCCAAACATGGTGTTaGGGAGTGTGGACTTGCCCGTGCCTGGCACCCCGACGGTTGACA +
Preference number: 5 (lower is better)
Translates to: DRSSSLWQTAAQTWC*GVWTCPCLAPRRLT
Trigger: TGTCAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAACACCATGTTTGGGCTGCGGTTTGCCACAGGGAAGAGCTGCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp GAGATGAACTCCTGCACCCCCGAGGAGGGATCATGGCCGTTCTGCTaGATTCGAAGTTCTAGCAGCCGCCGCCTCAGCTCAGCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: EMNSCTPEEGSWPFC*IRSSSSRRLSSALC
Trigger: GCACAGGGCTGAGCTGAGGCGGCGGCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGGGGTGCAGGAGTTCATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp TCACAGCCCAGGTCCTGGCTGAAGCCCTCAGCCACTGTGATGAGCTaGATGAAGGCCCCTCGAGGACCGCAGCTCTTCCCTGTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SQPRSWLKPSATVMS*MKAPRGPQLFPVAN
Trigger: GTTTGCCACAGGGAAGAGCTGCGGTCCTCGAGGGGCCTTCATGCAGCTCATCACAGTGGCTGAGGGCTTCAGCCAGGACCTGGGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 90 bp CTGCTGATCCCCGAGATGAACTCCTGCACCCCCGAGGAGGGATCATaGCCGTTCTGCTGCATTCGAAGTTCTAGCAGCCGCCGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LLIPEMNSCTPEEGS*PFCCIRSSSSRRLS
Trigger: GCTGAGGCGGCGGCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGGGGTGCAGGAGTTCATCTCGGGGATCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 90 bp TTTCTACCAACCCATCCGAAATCTCCCGGGCATTGGTGCCCAAGTTaGGGTCCCGATGCCAGAAGCAGTCCCACTGCCTGTGGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: FLPTHPKSPGHWCPS*GPDARSSPTACGPG
Trigger: GCCCGGGCCACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGCCCGGGAGATTTCGGATGGGTTGGTAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 90 bp GCGGCTCTCCGGCTGTCAGCAAAGGGTCTGCATCTGCCCGGATCCTaGCATTCTGGGTACGTCTCAACGACGCGGCAAACAAGCGTCCAC +
Preference number: 5 (lower is better)
Translates to: AALRLSAKGLHLPGS*HSGYVSTTRQTSVH
Trigger: GTGGACGCTTGTTTGCCGCGTCGTTGAGACGTACCCAGAATGTCAGGATCCGGGCAGATGCAGACCCTTTGCTGACAGCCGGAGAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS GCA 90 bp CTTTCTGACACTCCTCACAGTCCTCGTCGACCTTTAGGCCCAGTTTaGGGGCTGCGTGCGCCATGTCCTCCACAGATACCCGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSDTPHSPRRPLGPV*GLRAPCPPQIPACR
Trigger: CCTGCAGGCGGGTATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGTCGACGAGGACTGTGAGGAGTGTCAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp GAGATCCCGGAGCGGCTCTCCGGCTGTCAGCAAAGGGTCTGCATCTaGCCGGATCCTGACATTCTGGGTACGTCTCAACGACGCGGCAAA +
Preference number: 5 (lower is better)
Translates to: EIPERLSGCQQRVCI*PDPDILGTSQRRGK
Trigger: TTTGCCGCGTCGTTGAGACGTACCCAGAATGTCAGGATCCGGGCAGATGCAGACCCTTTGCTGACAGCCGGAGAGCCGCTCCGGGATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS GCA 90 bp ACCAAGGAGATCCCGGAGCGGCTCTCCGGCTGTCAGCAAAGGGTCTaGATCTGCCCGGATCCTGACATTCTGGGTACGTCTCAACGACGC +
Preference number: 5 (lower is better)
Translates to: TKEIPERLSGCQQRV*ICPDPDILGTSQRR
Trigger: GCGTCGTTGAGACGTACCCAGAATGTCAGGATCCGGGCAGATGCAGACCCTTTGCTGACAGCCGGAGAGCCGCTCCGGGATCTCCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS CCA 90 bp CCGGCTGTCAGCAAAGGGTCTGCATCTGCCCGGATCCTGACATTCTaGGTACGTCTCAACGACGCGGCAAACAAGCGTCCACTCCCAACG +
Preference number: 5 (lower is better)
Translates to: PAVSKGSASARILTF*VRLNDAANKRPLPT
Trigger: CGTTGGGAGTGGACGCTTGTTTGCCGCGTCGTTGAGACGTACCCAGAATGTCAGGATCCGGGCAGATGCAGACCCTTTGCTGACAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS GCA 90 bp AAATATGGCTTCACTGTAGGCCAAGCTCACTGCGGCCATGGGAGGTaGTCCGTGCCACAGGCCTGGGATGTGCCAGATGTGCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: KYGFTVGQAHCGHGR*SVPQAWDVPDVLLL
Trigger: GAGAAGCAGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTACAGTGAAGCCATATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS-3UTR CAA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTTGAGGAGTGTGGACTaGCCCGTGCCTGGCACCCCG +
Preference number: 5 (lower is better)
Translates to: WAGVREAFTDQSINTVPWLRSVD*PVPGTP
Trigger: CGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCACCTTTAGGCCCAGTTaGCGGGCTGCGTGCGCCATG +
Preference number: 5 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALTFRPS*RAACAM
Trigger: CATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGT...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAACAGAACCACCAGCCTaGACCGTCTCTCCAGTCGGA +
Preference number: 5 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPTEPPA*TVSPVG
Trigger: TCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTGT...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATTGAGGAGTGTGGACTaGCCCGTGCCTGGCACCCCG +
Preference number: 5 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRLRSVD*PVPGTP
Trigger: CGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATTGAGGAGTGTGGACTaGCCCGTGCCTGGCACCCCG +
Preference number: 5 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPLRSVD*PVPGTP
Trigger: CGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACTTGAGGAGTGTGGACTaGCCCGTGCCTGGCACCCCG +
Preference number: 5 (lower is better)
Translates to: AFTDQSINTVPWECLAHHLRSVD*PVPGTP
Trigger: CGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAA...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAAGAACAAACTGCTGCTaGTCTCCCTACCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPRTNCC*SPYPGG
Trigger: GCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCT...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS GCA 90 bp GCATCTCTTCAATTCAAATATGGCTTCACTGTAGGCCAAGCTCACTaGGGCCATGGGAGGTGCTCCGTGCCACAGGCCTGGGATGTGCCA +
Preference number: 5 (lower is better)
Translates to: ASLQFKYGFTVGQAH*GHGRCSVPQAWDVP
Trigger: TGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTACAGTGAAGCCATATTTGAATTGAAGAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 90 bp GATCTCCTCTTCCATCTGGCTCTCCTTCTCCACAGGCCTGGCGTCTaGGAGCACGTCCAGCACCATAGTGGTATTCCTGGCATCAGCATT +
Preference number: 5 (lower is better)
Translates to: DLLFHLALLLHRPGV*EHVQHHSGIPGISI
Trigger: AATGCTGATGCCAGGAATACCACTATGGTGCTGGACGTGCTCCCAGACGCCAGGCCTGTGGAGAAGGAGAGCCAGATGGAAGAGGAGATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000467410.1
ENST00000497914.5
CDS CCA 90 bp TCAATTCAAATATGGCTTCACTGTAGGCCAAGCTCACTGCGGCCATaGGAGGTGCTCCGTGCCACAGGCCTGGGATGTGCCAGATGTGCT +
Preference number: 5 (lower is better)
Translates to: SIQIWLHCRPSSLRP*EVLRATGLGCARCA
Trigger: AGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTACAGTGAAGCCATATTTGAATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS-3UTR CAA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCATTCCTGGCATCAGCATaGAGGGCCTGCAACTTCCTG +
Preference number: 5 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPFLASA*RACNFL
Trigger: CAGGAAGTTGCAGGCCCTCAATGCTGATGCCAGGAA...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTACCTTTAGGCCCAGTTaGCGGGCTGCGTGCGCCATG +
Preference number: 5 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPTFRPS*RAACAM
Trigger: CATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAACCTTTAGGCCCAGTTaGCGGGCTGCGTGCGCCATG +
Preference number: 5 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPTFRPS*RAACAM
Trigger: CATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGT...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTCCAGGAGCTGTCTCTaGTCTCTGGGCCTAGGGCCG +
Preference number: 5 (lower is better)
Translates to: CCLSPYPGGCDILGNISESRSCL*SLGLGP
Trigger: CGGCCCTAGGCCCAGAGACAAGAGACAGCTCCTGGA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATCCAGGAGCTGTCTCTaGTCTCTGGGCCTAGGGCCG +
Preference number: 5 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPSRSCL*SLGLGP
Trigger: CGGCCCTAGGCCCAGAGACAAGAGACAGCTCCTGGA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGTCTTCTCATGTCGATaGGGCACCAGCCATTCTCAG +
Preference number: 5 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPVFSCR*GTSHSQ
Trigger: CTGAGAATGGCTGGTGCCCAATCGACATGAGAAGAC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp CGACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAAAGCAAGGGGATCACTaGAGCCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: RPVNSSWAGVREAFTDQSKQGDH*SPGVQD
Trigger: GTCTTGAACTCCTGGGCTCAAGTGATCCCCTTGCTT...TGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CAA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGAGCTGGGACTTGGAGTaGCTACTGACGTCCATGCGC +
Preference number: 5 (lower is better)
Translates to: WAGVREAFTDQSINTVPWSWDLE*LLTSMR
Trigger: GCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCT...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATGAAATCTCCCGGGCATaGGTGCCCAAGTTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNEISRA*VPKLRS
Trigger: GGACCTCAACTTGGGCACCAATGCCCGGGAGATTTC...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACCTTTAGGCCCAGTTaGCGGGCTGCGTGCGCCATG +
Preference number: 5 (lower is better)
Translates to: VNSSWAGVREAFTDQSINTFRPS*RAACAM
Trigger: CATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGT...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAACTCCTTCTCCACTaGGGCTGCCTTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: WAGVREAFTDQSINTVPWELLLH*GCLSPG
Trigger: CCCTGGAGAAAGGCAGCCCAAGTGGAGAAGGAGTTC...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATCCAGGAGCTGTCTCTaGTCTCTGGGCCTAGGGCCG +
Preference number: 5 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPSRSCL*SLGLGP
Trigger: CGGCCCTAGGCCCAGAGACAAGAGACAGCTCCTGGA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGCCTTGCACACCACGGGCACTCACATCTTGAATGCTGGTCCACTGGAGGCCCTGGGGCTGTGATATTCTaGGTAACATCTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: CLAHHGHSHLECWSTGGPGAVIF*VTSLSW
Trigger: CCAGCTCAGAGATGTTACCAAGAATATCACAGCCCC...AGGGCCTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGTGGTGTGCAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCACCCCGCAGGATCCTaGACAGGAGCTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: WAGVREAFTDQSINTVPWHPAGS*TGAETE
Trigger: TTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGTG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCACCCCGCAGGATCCTaGACAGGAGCTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALHPAGS*TGAETE
Trigger: TTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGTG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCTGGGACTTGGAGTaGCTACTGACGTCCATGCGC +
Preference number: 5 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLSWDLE*LLTSMR
Trigger: GCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCT...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACAGCTGGGACTTGGAGTaGCTACTGACGTCCATGCGC +
Preference number: 5 (lower is better)
Translates to: AFTDQSINTVPWECLAHHSWDLE*LLTSMR
Trigger: GCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAGCTGGGACTTGGAGTaGCTACTGACGTCCATGCGC +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGSWDLE*LLTSMR
Trigger: GCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCT...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGGCATTGGTGCCCAAGTaGAGGTCCCGATGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLALVPK*RSRCQK
Trigger: CTTCTGGCATCGGGACCTCAACTTGGGCACCAATGC...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGCATTGGTGCCCAAGTaGAGGTCCCGATGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: AFTDQSINTVPWECLAHHALVPK*RSRCQK
Trigger: CTTCTGGCATCGGGACCTCAACTTGGGCACCAATGC...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCATCAGAAATCTCAGGTTaGTGTTGCGCTTCCCACGGT +
Preference number: 5 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPSEISG*CCASHG
Trigger: ACCGTGGGAAGCGCAACACAAACCTGAGATTTCTGA...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGGAACTCCTTCTCCACTaGGGCTGCCTTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TAACLPTLGAVIFLVTSLELLLH*GCLSPG
Trigger: CCCTGGAGAAAGGCAGCCCAAGTGGAGAAGGAGTTC...CAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGGAACTCCTTCTCCACTaGGGCTGCCTTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: CCLSPYPGGCDILGNISEELLLH*GCLSPG
Trigger: CCCTGGAGAAAGGCAGCCCAAGTGGAGAAGGAGTTC...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTACAGAACCACCAGCCTaGACCGTCTCTCCAGTCGGA +
Preference number: 5 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPTEPPA*TVSPVG
Trigger: TCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTGT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAGAACAAACTGCTGCTaGTCTCCCTACCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGRTNCC*SPYPGG
Trigger: GCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCT...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTCACCCCGCAGGATCCTaGACAGGAGCTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGHPAGS*TGAETE
Trigger: TTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGTG...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCACGGGCACTCACATCTaGAATGCTGGTCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALTGTHI*NAGPLE
Trigger: CTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGT...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS TCA 90 bp CGATGGCCCGGATCCTCTTCACGAAGCTGTCGCTGTCAGTGCTGCTaGCCTTTACCAGGACATGTGAGTGGTCTATTTTCAGCACAGGAA +
Preference number: 5 (lower is better)
Translates to: RWPGSSSRSCRCQCC*PLPGHVSGLFSAQE
Trigger: TTCCTGTGCTGAAAATAGACCACTCACATGTCCTGGTAAAGGTCAGCAGCACTGACAGCGACAGCTTCGTGAAGAGGATCCGGGCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 90 bp CACTTCTGCCCAGTGTGTGGCCCTTGGCAGGTTGTTTGGAAGCTCTaGGCCCAGTATCCTGATCTGTTGGAAAATCATTGTCCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: HFCPVCGPWQVVWKL*AQYPDLLENHCPEP
Trigger: AGGCTCAGGACAATGATTTTCCAACAGATCAGGATACTGGGCCCAGAGCTTCCAAACAACCTGCCAAGGGCCACACACTGGGCAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446958.1
CDS-3UTR CAA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGATTCCTGGCATCAGCATaGAGGGCCTGCAACTTCCTG +
Preference number: 5 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRFLASA*RACNFL
Trigger: CAGGAAGTTGCAGGCCCTCAATGCTGATGCCAGGAA...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGTTGAGAAGCTGGGACTaGGAGTTGCTACTGACGTCC +
Preference number: 5 (lower is better)
Translates to: WAGVREAFTDQSINTVPWLRSWD*ELLLTS
Trigger: GGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAA...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAGAAATCTCCCGGGCATaGGTGCCCAAGTTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPEISRA*VPKLRS
Trigger: GGACCTCAACTTGGGCACCAATGCCCGGGAGATTTC...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGAGCCCAAACATGGTGTaGAGGAGTGTGGACTTGCCC +
Preference number: 5 (lower is better)
Translates to: CCLSPYPGGCDILGNISESPNMV*RSVDLP
Trigger: GGGCAAGTCCACACTCCTCAACACCATGTTTGGGCT...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp CAAGGCCTACTTCTGCTTCCTCAGGACAACTTCCCCACCTCTGTCCTGGGACCAAGCTGCTGGATGTTTTaGTTTTGGTTCGACAAGCCG +
Preference number: 5 (lower is better)
Translates to: QGLLLLPQDNFPTSVLGPSCWMF*FWFDKP
Trigger: CGGCTTGTCGAACCAAAACAAAAACATCCAGCAGCT...TGGTCCCAGGACAGAGGTGGGGAAGTTGTCCTGAGGAAGCAGAAGTAGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCAAGAACAAACTGCTGCTaGTCTCCCTACCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPRTNCC*SPYPGG
Trigger: GCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCT...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGACGGGCACTCACATCTaGAATGCTGGTCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: CCLSPYPGGCDILGNISETGTHI*NAGPLE
Trigger: CTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGT...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTACGGGCACTCACATCTaGAATGCTGGTCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGTGTHI*NAGPLE
Trigger: CTCCAGTGGACCAGCATTCAAGATGTGAGTGCCCGT...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS GCA 90 bp CTCTCTGATGCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATaGCCTTTGCCCAGTAATTCCACTTCCGGGCGACGCCATGAGCGC +
Preference number: 5 (lower is better)
Translates to: LSDAFISGATSPKSE*PLPSNSTSGRRHER
Trigger: GCGCTCATGGCGTCGCCCGGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCATCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443736.5
CDS-3UTR CAA 90 bp TCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTTTCCTGGCATCAGCATaGAGGGCCTGCAACTTCCTG +
Preference number: 5 (lower is better)
Translates to: SKPCLFLVFSCRLGTSHSFLASA*RACNFL
Trigger: CAGGAAGTTGCAGGCCCTCAATGCTGATGCCAGGAA...AGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGTTGAGAAGCTGGGACTaGGAGTTGCTACTGACGTCC +
Preference number: 5 (lower is better)
Translates to: CCLSPYPGGCDILGNISELRSWD*ELLLTS
Trigger: GGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAA...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTTGAGAAGCTGGGACTaGGAGTTGCTACTGACGTCC +
Preference number: 5 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPLRSWD*ELLLTS
Trigger: GGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTTGAGAAGCTGGGACTaGGAGTTGCTACTGACGTCC +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGLRSWD*ELLLTS
Trigger: GGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCTCAGAAATCTCAGGTTaGTGTTGCGCTTCCCACGGT +
Preference number: 5 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALSEISG*CCASHG
Trigger: ACCGTGGGAAGCGCAACACAAACCTGAGATTTCTGA...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGAACTCCTTCTCCACTaGGGCTGCCTTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWELLLH*GCLSPG
Trigger: CCCTGGAGAAAGGCAGCCCAAGTGGAGAAGGAGTTC...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAACATCTCTGAGCTGATCACGGTGACATaGCTCAGTCCCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: CCLSPYPGGCDILGNISELITVT*LSPMSR
Trigger: TCTGCTCATGGGACTGAGCAATGTCACCGTGATCAG...CTCAGAGATGTTACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACTGATCACGGTGACATaGCTCAGTCCCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRLITVT*LSPMSR
Trigger: TCTGCTCATGGGACTGAGCAATGTCACCGTGATCAG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTCTGATCACGGTGACATaGCTCAGTCCCATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGLITVT*LSPMSR
Trigger: TCTGCTCATGGGACTGAGCAATGTCACCGTGATCAG...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAGTCTTCTCATGTCGATaGGGCACCAGCCATTCTCAG +
Preference number: 5 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRVFSCR*GTSHSQ
Trigger: CTGAGAATGGCTGGTGCCCAATCGACATGAGAAGAC...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATGGGGCTGTGATATTCTaGGTAACATCTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNGAVIF*VTSLSW
Trigger: CCAGCTCAGAGATGTTACCAAGAATATCACAGCCCC...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGAGAACAAACTGCTGCTaGTCTCCCTACCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWRTNCC*SPYPGG
Trigger: GCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCT...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGCACCCCGCAGGATCCTaGACAGGAGCTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWHPAGS*TGAETE
Trigger: TTCTGTCTCAGCTCCTGTCAAGGATCCTGCGGGGTG...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS TCA 90 bp GCCTGCAACTTCCTGAGGAAATTCCAGGGCAAGTCTTTGGGAACCTaGGGGGCCCAGTTCTTCATACTGTCAAAACTGATCTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: ACNFLRKFQGKSLGT*GAQFFILSKLICRE
Trigger: CTCTCTGCAGATCAGTTTTGACAGTATGAAGAACTGGGCCCCTCAGGTTCCCAAAGACTTGCCCTGGAATTTCCTCAGGAAGTTGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000467410.1
ENST00000474376.1
ENST00000497914.5
CDS TCA 90 bp TCTTTGATTTTCCTGGTAATCCTCTCCATCCGGTCTTTCGCTTTCTaGCACTCCTCACAGTCCTCGTCGACCTTTAGGCCCAGTTTGCGG +
Preference number: 5 (lower is better)
Translates to: SLIFLVILSIRSFAF*HSSQSSSTFRPSLR
Trigger: CCGCAAACTGGGCCTAAAGGTCGACGAGGACTGTGAGGAGTGTCAGAAAGCGAAAGACCGGATGGAGAGGATTACCAGGAAAATCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS-3UTR CAA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGTTCCTGGCATCAGCATaGAGGGCCTGCAACTTCCTG +
Preference number: 5 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWFLASA*RACNFL
Trigger: CAGGAAGTTGCAGGCCCTCAATGCTGATGCCAGGAA...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACTCAGAAATCTCAGGTTaGTGTTGCGCTTCCCACGGT +
Preference number: 5 (lower is better)
Translates to: AFTDQSINTVPWECLAHHSEISG*CCASHG
Trigger: ACCGTGGGAAGCGCAACACAAACCTGAGATTTCTGA...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATGTCTTCTCATGTCGATaGGGCACCAGCCATTCTCAG +
Preference number: 5 (lower is better)
Translates to: VNSSWAGVREAFTDQSINVFSCR*GTSHSQ
Trigger: CTGAGAATGGCTGGTGCCCAATCGACATGAGAAGAC...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGCCTCTTTTAACACTGTaGAGGAGACTCCAAACCCTG +
Preference number: 5 (lower is better)
Translates to: WAGVREAFTDQSINTVPWPLLTL*RRLQTL
Trigger: CAGGGTTTGGAGTCTCCTCAACAGTGTTAAAAGAGG...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACGGGCACTCCCTCTTTTAACACTGTaGAGGAGACTCCAAACCCTG +
Preference number: 5 (lower is better)
Translates to: RSVNKYGAMGVPCTPRALPLLTL*RRLQTL
Trigger: CAGGGTTTGGAGTCTCCTCAACAGTGTTAAAAGAGG...GAGTGCCCGTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGGGGGCTGTGATATTCTaGGTAACATCTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRGAVIF*VTSLSW
Trigger: CCAGCTCAGAGATGTTACCAAGAATATCACAGCCCC...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTGGGGCTGTGATATTCTaGGTAACATCTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGGAVIF*VTSLSW
Trigger: CCAGCTCAGAGATGTTACCAAGAATATCACAGCCCC...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS GCA 90 bp CTCTCTGATGCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATaGCCTTTGCCCAGTAATTCCACTTCTATCCCGGGCGACGCCATG +
Preference number: 5 (lower is better)
Translates to: LSDAFISGATSPKSE*PLPSNSTSIPGDAM
Trigger: CATGGCGTCGCCCGGGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCATCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453200.6
CDS CCA 90 bp CAGCAGAAATGTATGGTAGTGGTTCTCCGAGTCAGGCAACACGAGTaGGAGTGCAAACTGGCAGAGGGCCATTTTCAACGCTATTTCTTG +
Preference number: 5 (lower is better)
Translates to: QQKCMVVVLRVRQHE*ECKLAEGHFQRYFL
Trigger: CAAGAAATAGCGTTGAAAATGGCCCTCTGCCAGTTTGCACTCCCACTCGTGTTGCCTGACTCGGAGAACCACTACCATACATTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS-3UTR CAA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGAAAAGAAACGGACTCCTaGGAGATCCTGAATGATGGC +
Preference number: 5 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRKETDS*EILNDG
Trigger: GCCATCATTCAGGATCTCCAAGGAGTCCGTTTCTTT...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CAA 90 bp TGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGATATGCACCCACAGTaGAGAAACACTGGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: WAGVREAFTDQSINTVPWDMHPQ*RNTGLE
Trigger: TTCTAGACCAGTGTTTCTCAACTGTGGGTGCATATC...CCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CAA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGTCCTGAGCCTCATTaGTACCATCTCCATAACGGA +
Preference number: 5 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPCPEPH*YHLHNG
Trigger: TCCGTTATGGAGATGGTACAAATGAGGCTCAGGACA...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCATGTCCTGAGCCTCATTaGTACCATCTCCATAACGGA +
Preference number: 5 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPCPEPH*YHLHNG
Trigger: TCCGTTATGGAGATGGTACAAATGAGGCTCAGGACA...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTGTCCTGAGCCTCATTaGTACCATCTCCATAACGGA +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGCPEPH*YHLHNG
Trigger: TCCGTTATGGAGATGGTACAAATGAGGCTCAGGACA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp ACCAGTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATTGCTTCTCTCCACTGTaGGAAAATCATTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: TSELFLGRGQGSLHRSVNCFSPL*ENHCPE
Trigger: CTCAGGACAATGATTTTCCAACAGTGGAGAGAAGCA...ATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCATCAGAAATCTCAGGTTaGTGTTGCGCTTCCCACGGT +
Preference number: 5 (lower is better)
Translates to: SLHRSVNKYGAMGVPCTPSEISG*CCASHG
Trigger: ACCGTGGGAAGCGCAACACAAACCTGAGATTTCTGA...TGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAAGCTGCTGGATGTTTTaGTTTTGGTTCGACAAGCCG +
Preference number: 5 (lower is better)
Translates to: EETPNPVFSSSSHVDWAPSCWMF*FWFDKP
Trigger: CGGCTTGTCGAACCAAAACAAAAACATCCAGCAGCT...TGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACAGCTGCTGGATGTTTTaGTTTTGGTTCGACAAGCCG +
Preference number: 5 (lower is better)
Translates to: AFTDQSINTVPWECLAHHSCWMF*FWFDKP
Trigger: CGGCTTGTCGAACCAAAACAAAAACATCCAGCAGCT...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTTGCACACCACCCTCTTTTAACACTGTaGAGGAGACTCCAAACCCTG +
Preference number: 5 (lower is better)
Translates to: AFTDQSINTVPWECLAHHPLLTL*RRLQTL
Trigger: CAGGGTTTGGAGTCTCCTCAACAGTGTTAAAAGAGG...GTGGTGTGCAAGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS TCA 90 bp AATACCTTCCACGCTAAAAGAAACGGACTCCTTGGAGATCCTGAATaGTGGCTGGGGCAAGGAAAGAACAGGAGGAGCCTGAGCATCTTA +
Preference number: 5 (lower is better)
Translates to: NTFHAKRNGLLGDPE*WLGQGKNRRSLSIL
Trigger: TAAGATGCTCAGGCTCCTCCTGTTCTTTCCTTGCCCCAGCCATCATTCAGGATCTCCAAGGAGTCCGTTTCTTTTAGCGTGGAAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS GCA 90 bp TGGGTTTCTCTGCACACTCACAGCCGTCTCACCAGCTCAATGAGCTaGTGGATGTTTTTGTTTTGGTTCGACAAGCCGTTCCTGATGTTT +
Preference number: 5 (lower is better)
Translates to: WVSLHTHSRLTSSMS*WMFLFWFDKPFLMF
Trigger: AAACATCAGGAACGGCTTGTCGAACCAAAACAAAAACATCCAGCAGCTCATTGAGCTGGTGAGACGGCTGTGAGTGTGCAGAGAAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTTGCTTCTCTCCACTGTaGGAAAATCATTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGCFSPL*ENHCPE
Trigger: CTCAGGACAATGATTTTCCAACAGTGGAGAGAAGCA...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGTGCTTCTCTCCACTGTaGGAAAATCATTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRCFSPL*ENHCPE
Trigger: CTCAGGACAATGATTTTCCAACAGTGGAGAGAAGCA...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTAGAAATCTCCCGGGCATaGGTGCCCAAGTTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLEISRA*VPKLRS
Trigger: GGACCTCAACTTGGGCACCAATGCCCGGGAGATTTC...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp TCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCACCAGACTGGATGTTTTTGTTTaGGTTCGACAAGCCGTTCCT +
Preference number: 5 (lower is better)
Translates to: SFPRLLMSIGHQPFSGTRLDVFV*VRQAVP
Trigger: AGGAACGGCTTGTCGAACCAAAACAAAAACATCCAG...TCTGGTGCCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp AACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCACCAGCCATTCTCAGGCTGGATGTTTTTGTTTaGGTTCGACAAGCCGTTCCT +
Preference number: 5 (lower is better)
Translates to: NPVFSSSSHVDWAPAILRLDVFV*VRQAVP
Trigger: AGGAACGGCTTGTCGAACCAAAACAAAAACATCCAG...CCTGAGAATGGCTGGTGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTCTGGATGTTTTTGTTTaGGTTCGACAAGCCGTTCCT +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGLDVFV*VRQAVP
Trigger: AGGAACGGCTTGTCGAACCAAAACAAAAACATCCAG...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAAGCTGCTGGATGTTTTaGTTTTGGTTCGACAAGCCG +
Preference number: 5 (lower is better)
Translates to: VEETPNPVFSSSSHVDWASCWMF*FWFDKP
Trigger: CGGCTTGTCGAACCAAAACAAAAACATCCAGCAGCT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS CCA 90 bp CTTGGCAGGTTGTTTGGAAGCTCTGGGCCCAGTATCCTGATCTGTTaGAAAATCATTGTCCTGAGCCTCATTTGTACCATCTCCATAACG +
Preference number: 5 (lower is better)
Translates to: LGRLFGSSGPSILIC*KIIVLSLICTISIT
Trigger: CGTTATGGAGATGGTACAAATGAGGCTCAGGACAATGATTTTCCAACAGATCAGGATACTGGGCCCAGAGCTTCCAAACAACCTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446958.1
CDS-3UTR CAA 90 bp GGTCAGGGAAGCCTTCACAGATCAGTCAATAAATACGGTGCCATGGGAGTGCCTAAAGAGAAGGCTCTCTaGCTCACATCAGAACATGAA +
Preference number: 5 (lower is better)
Translates to: GQGSLHRSVNKYGAMGVPKEKAL*LTSEHE
Trigger: TTCATGTTCTGATGTGAGCAAGAGAGCCTTCTCTTT...AGGCACTCCCATGGCACCGTATTTATTGACTGATCTGTGAAGGCTTCCCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CAA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGTGTCCTGAGCCTCATTaGTACCATCTCCATAACGGA +
Preference number: 5 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWCPEPH*YHLHNG
Trigger: TCCGTTATGGAGATGGTACAAATGAGGCTCAGGACA...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS-3UTR CAA 90 bp GTGAACTCTTCCTGGGCAGGGGTCAGGGAAGCCTTCACAGATCAGTCAATAAATTGCTTCTCTCCACTGTaGGAAAATCATTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: VNSSWAGVREAFTDQSINCFSPL*ENHCPE
Trigger: CTCAGGACAATGATTTTCCAACAGTGGAGAGAAGCA...ATTTATTGACTGATCTGTGAAGGCTTCCCTGACCCCTGCCCAGGAAGAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
CDS GCA 90 bp AGGCTCTCTTGCTCACATCAGAACATGAAATGTGGAGGGGGATGCTaGAGTCAGAATAGTATCATTTTAGAGCAGGGTGCAGTGACTCAT +
Preference number: 5 (lower is better)
Translates to: RLSCSHQNMKCGGGC*SQNSIILEQGAVTH
Trigger: ATGAGTCACTGCACCCTGCTCTAAAATGATACTATTCTGACTGCAGCATCCCCCTCCACATTTCATGTTCTGATGTGAGCAAGAGAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS GCA 90 bp GTCCACATGGATAATAAATACATGGGCAGAAAGAGAAGGCTCTCTTaGTCACATCAGAACATGAAATGTGGAGGGGGATGCTGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: VHMDNKYMGRKRRLS*SHQNMKCGGGCCSQ
Trigger: CTGACTGCAGCATCCCCCTCCACATTTCATGTTCTGATGTGAGCAAGAGAGCCTTCTCTTTCTGCCCATGTATTTATTATCCATGTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS-3UTR CAA 90 bp GTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGGCAAAATCTGAATGCCCTTaGCCCAGTAATTCCACTTCT +
Preference number: 5 (lower is better)
Translates to: VEETPNPVFSSSSHVDWAKSECP*PSNSTS
Trigger: AGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTT...TGCCCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453200.6
CDS-3UTR CAA 90 bp ACTGTTGAGGAGACTCCAAACCCTGTCTTTTCCTCGTCTTCTCATGTCGATTGGAAATCTGAATGCCCTTaGCCCAGTAATTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: TVEETPNPVFSSSSHVDWKSECP*PSNSTS
Trigger: GGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTT...CCAATCGACATGAGAAGACGAGGAAAAGACAGGGTTTGGAGTCTCCTCAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443736.5
CDS TCA 90 bp GAAATCTCAGGTTTGTGTTGCGCTTCCCACGGTAGGGACTCAGGATaGAGTAGTATTTTGTGGTTGACTCCTTCATGGAGTACAGCAATT +
Preference number: 5 (lower is better)
Translates to: EISGLCCASHGRDSG*SSILWLTPSWSTAI
Trigger: AATTGCTGTACTCCATGAAGGAGTCAACCACAAAATACTACTTCATCCTGAGTCCCTACCGTGGGAAGCGCAACACAAACCTGAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp ATGCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTTaGCCAGTAATTCCACTTCTATCCTGTAGTCCCAGCTACTCAGGA +
Preference number: 5 (lower is better)
Translates to: MLLFLGLLLPNLNAL*PVIPLLSCSPSYSG
Trigger: TCCTGAGTAGCTGGGACTACAGGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477768.1
CDS CCA 90 bp ACTCGCAATCATCTCCTTCCATTTCTCTCCATTCCAAATCTGCAATaGCCACAGCTGTTCGTCTCTCTGATGCTTTTATTTCTGGGGCTA +
Preference number: 5 (lower is better)
Translates to: TRNHLLPFLSIPNLQ*PQLFVSLMLLFLGL
Trigger: TAGCCCCAGAAATAAAAGCATCAGAGAGACGAACAGCTGTGGCCATTGCAGATTTGGAATGGAGAGAAATGGAAGGAGATGATTGCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000443736.5
ENST00000446958.1
ENST00000453200.6
ENST00000497914.5
CDS-3UTR CAA 90 bp GACAGAACAAACTGCTGCTTGTCTCCCTACCCTGGGGGCTGTGATATTCTTGGTAAATATACATACCCTTaGCCCAGTAATTCCACTTCT +
Preference number: 5 (lower is better)
Translates to: DRTNCCLSPYPGGCDILGKYTYP*PSNSTS
Trigger: AGAAGTGGAATTACTGGGCAAAGGGTATGTATATTT...ACCAAGAATATCACAGCCCCCAGGGTAGGGAGACAAGCAGCAGTTTGTTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS TCA 90 bp GCGCTTCCCACGGTAGGGACTCAGGATGAAGTAGTATTTTGTGGTTaGCTCCTTCATGGAGTACAGCAATTTGTATTCCTTCTTACTGAT +
Preference number: 5 (lower is better)
Translates to: ALPTVGTQDEVVFCG*LLHGVQQFVFLLTD
Trigger: ATCAGTAAGAAGGAATACAAATTGCTGTACTCCATGAAGGAGTCAACCACAAAATACTACTTCATCCTGAGTCCCTACCGTGGGAAGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 90 bp CTCTCTGATGCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATaGCCTTTGCCCAGTAATTCCACTTCTGTAAAGCTCTTTGGGAAC +
Preference number: 5 (lower is better)
Translates to: LSDAFISGATSPKSE*PLPSNSTSVKLFGN
Trigger: GTTCCCAAAGAGCTTTACAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCATCAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS GCA 90 bp CTCTCTGATGCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATaGCCTTTGCCCAGTAATTCCACTTCTATCAGAGTTAAGAACCAC +
Preference number: 5 (lower is better)
Translates to: LSDAFISGATSPKSE*PLPSNSTSIRVKNH
Trigger: GTGGTTCTTAACTCTGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCATCAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426198.5
CDS-3UTR CAA 90 bp GTGATATTCTTGGTAACATCTCTGAGCTGGTCTGTGAGGTCACTTCCTCTTTTACGCTATGGATTTCTTTaGTGGACAAAAAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: VIFLVTSLSWSVRSLPLLRYGFL*WTKRCW
Trigger: CCAGCATCTTTTTGTCCACAAAAGAAATCCATAGCG...TAAAAGAGGAAGTGACCTCACAGACCAGCTCAGAGATGTTACCAAGAATATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS GCA 90 bp ATGCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTTaGCCAGTAATTCCACTTCTATCAGAGTTAAGAACCACTATTCTC +
Preference number: 5 (lower is better)
Translates to: MLLFLGLLLPNLNAL*PVIPLLSELRTTIL
Trigger: GAGAATAGTGGTTCTTAACTCTGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426198.5
CDS CCA 72 bp GTGAGAAGCGTCTCCGGAGGCTGTCTCAGTCGCGGCTaGGCCACCCGTGCCAGGCCCCACTCCATCCACCTC +
Preference number: 6 (lower is better)
Translates to: VRSVSGGCLSRG*ATRARPHSIHL
Trigger: GAGGTGGATGGAGTGGGGCCTGGCACGGGTGGCCCAGCCGCGACTGAGACAGCCTCCGGAGACGCTTCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp GGGCTGCGTGCGCCATGTCCTCCACAGATACCCGCCTaGAGGGTGCCCGCAGCACATTCCCAACGATGGCCC +
Preference number: 6 (lower is better)
Translates to: GLRAPCPPQIPA*RVPAAHSQRWP
Trigger: GGGCCATCGTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGGAGGACATGGCGCACGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp CTCCGGAGGCTGTCTCAGTCGCGGCTGGGCCACCCGTaGCAGGCCCCACTCCATCCACCTCAGGAAGTACTG +
Preference number: 6 (lower is better)
Translates to: LRRLSQSRLGHP*QAPLHPPQEVL
Trigger: CAGTACTTCCTGAGGTGGATGGAGTGGGGCCTGGCACGGGTGGCCCAGCCGCGACTGAGACAGCCTCCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp GGCCAGAGCGGCTCCCCCACGTCTGTGGTGCCCCCATaGTTTGGTCTCAGGGTGAGAAGCGTCTCCGGAGGC +
Preference number: 6 (lower is better)
Translates to: GQSGSPTSVVPP*FGLRVRSVSGG
Trigger: GCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGCATGGGGGCACCACAGACGTGGGGGAGCCGCTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 72 bp ATAAGCGCAGCCACCCCAAGGCAGGCCGGTAGGCAATaGCCCCGACCAAGGAGATCCCGGAGCGGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: ISAATPRQAGRQ*PRPRRSRSGSP
Trigger: CGGAGAGCCGCTCCGGGATCTCCTTGGTCGGGGCCATTGCCTACCGGCCTGCCTTGGGGTGGCTGCGCTTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS CAA 90 bp CTGTGGCCCGGGCTGAGGACGGCGTTGAGAAGCTGGGACTTGGAGTaGCTACTGACGTCCATGCGCACGAAGGCGAAGGCGGGCGCCCTG +
Preference number: 6 (lower is better)
Translates to: LWPGLRTALRSWDLE*LLTSMRTKAKAGAL
Trigger: CAGGGCGCCCGCCTTCGCCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp AGCCCCTCCTCTTCGCTGGCCTCTCCGGGGCCTTGCTaGCTAGTGGTCGAAGCCACAGGACCAGGTGCGGGT +
Preference number: 6 (lower is better)
Translates to: SPSSSLASPGPC*LVVEATGPGAG
Trigger: ACCCGCACCTGGTCCTGTGGCTTCGACCACTAGTCAGCAAGGCCCCGGAGAGGCCAGCGAAGAGGAGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426198.5
ENST00000455877.5
ENST00000477768.1
CDS GCA 72 bp GGTGCTCCGTGCCACAGGCCTGGGATGTGCCAGATGTaGTGCTTCTCAGGGTCGCAGAAGGCCAGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: GAPCHRPGMCQM*CFSGSQKARPA
Trigger: GGCAGGCCTGGCCTTCTGCGACCCTGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp CACTGCCTGTGGCCCGGGCTGAGGACGGCGTTGAGAAGCTGGGACTaGGAGTTGCTACTGACGTCCATGCGCACGAAGGCGAAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: HCLWPGLRTALRSWD*ELLLTSMRTKAKAG
Trigger: GCCCGCCTTCGCCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp CGTAAAGCCAACGAGCCCCTCCTCTTCGCTGGCCTCTCCGGGGCCTaGCTGACTAGTGGTCGAAGCCACAGGACCAGGTGCGGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: RKANEPLLFAGLSGA*LTSGRSHRTRCGWP
Trigger: TGGCCACCCGCACCTGGTCCTGTGGCTTCGACCACTAGTCAGCAAGGCCCCGGAGAGGCCAGCGAAGAGGAGGGGCTCGTTGGCTTTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426198.5
ENST00000455877.5
ENST00000477768.1
CDS TCA 72 bp CTACTTCTCCCAAATCTGAATGCCCGGGCGACGCCATaGGCGCAGCGAGGTCTCCGCTCCCGCCTCCTTCGC +
Preference number: 6 (lower is better)
Translates to: LLLPNLNARATP*AQRGLRSRLLR
Trigger: GCGAAGGAGGCGGGAGCGGAGACCTCGCTGCGCTCATGGCGTCGCCCGGGCATTCAGATTTGGGAGAAGTAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402306.7
ENST00000446958.1
CDS GCA 72 bp CCCAAGTTGAGGTCCCGATGCCAGAAGCAGTCCCACTaGCTGTGGCCCGGGCTGAGGACGGCGTTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: PKLRSRCQKQSH*LWPGLRTALRS
Trigger: GCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp ATCTCCCGGGCATTGGTGCCCAAGTTGAGGTCCCGATaGCAGAAGCAGTCCCACTGCCTGTGGCCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: ISRALVPKLRSR*QKQSHCLWPGL
Trigger: CAGCCCGGGCCACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGCCCGGGAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp GTGCGCCATGTCCTCCACAGATACCCGCCTGCAGGGTaGCCGCAGCACATTCCCAACGATGGCCCGGATCCT +
Preference number: 6 (lower is better)
Translates to: VRHVLHRYPPAG*PQHIPNDGPDP
Trigger: AGGATCCGGGCCATCGTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGGAGGACATGGCGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp TGCCCGGAAGCCGTCGCCCTGTTTCTCCATCTGGGCTaGAGCCCTGCTCAGGTCACCAGGTGGATCCAGGAG +
Preference number: 6 (lower is better)
Translates to: CPEAVALFLHLG*SPAQVTRWIQE
Trigger: CTCCTGGATCCACCTGGTGACCTGAGCAGGGCTGCAGCCCAGATGGAGAAACAGGGCGACGGCTTCCGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp GCTCCGTGCCACAGGCCTGGGATGTGCCAGATGTGCTaGTTCTCAGGGTCGCAGAAGGCCAGGCCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: APCHRPGMCQMC*FSGSQKARPAS
Trigger: ACTGGCAGGCCTGGCCTTCTGCGACCCTGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp GCCATGGGAGGTGCTCCGTGCCACAGGCCTGGGATGTaGCAGATGTGCTGCTTCTCAGGGTCGCAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: AMGGAPCHRPGM*QMCCFSGSQKA
Trigger: GGCCTTCTGCGACCCTGAGAAGCAGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 72 bp TTGAGGTCCCGATGCCAGAAGCAGTCCCACTGCCTGTaGCCCGGGCTGAGGACGGCGTTGAGAAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LRSRCQKQSHCL*PGLRTALRSWD
Trigger: GTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 72 bp CCCGCCTGCAGGGTGCCCGCAGCACATTCCCAACGATaGCCCGGATCCTCTTCACGAAGCTGTCGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: PACRVPAAHSQR*PGSSSRSCRCQ
Trigger: CTGACAGCGACAGCTTCGTGAAGAGGATCCGGGCCATCGTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 72 bp GAGCGGCTCCCCCACGTCTGTGGTGCCCCCATGCTTTaGTCTCAGGGTGAGAAGCGTCTCCGGAGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: ERLPHVCGAPML*SQGEKRLRRLS
Trigger: AGACAGCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGCATGGGGGCACCACAGACGTGGGGGAGCCGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp CACGGCCCACTGGAGCTGGCAGAACTCCTTCTCCACTaGGGCTGCCTTTCTCCAGGGGTCCCCCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: HGPLELAELLLH*GCLSPGVPLQP
Trigger: AGGCTGCAGGGGGACCCCTGGAGAAAGGCAGCCCAAGTGGAGAAGGAGTTCTGCCAGCTCCAGTGGGCCGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp AACGAGCCCCTCCTCTTCGCTGGCCTCTCCGGGGCCTaGCTGACTAGTGGTCGAAGCCACAGGACCAGGTGC +
Preference number: 6 (lower is better)
Translates to: NEPLLFAGLSGA*LTSGRSHRTRC
Trigger: GCACCTGGTCCTGTGGCTTCGACCACTAGTCAGCAAGGCCCCGGAGAGGCCAGCGAAGAGGAGGGGCTCGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426198.5
ENST00000455877.5
ENST00000477768.1
CDS CAA 90 bp ACTTGCCCGTGCCTGGCACCCCGACGGTTGACAGAACCACCAGCCTaGACCGTCTCTCCAGTCGGACGTGCAGCTCCTTCAGGAGCCCTG +
Preference number: 6 (lower is better)
Translates to: TCPCLAPRRLTEPPA*TVSPVGRAAPSGAL
Trigger: CAGGGCTCCTGAAGGAGCTGCACGTCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTGTCAACCGTCGGGGTGCCAGGCACGGGCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp CCACGTCTGTGGTGCCCCCATGCTTTGGTCTCAGGGTaGGAAGCGTCTCCGGAGGCTGTCTCAGTCGCGGCT +
Preference number: 6 (lower is better)
Translates to: PRLWCPHALVSG*EASPEAVSVAA
Trigger: AGCCGCGACTGAGACAGCCTCCGGAGACGCTTCTCACCCTGAGACCAAAGCATGGGGGCACCACAGACGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp TCCTCGTCGACCTTTAGGCCCAGTTTGCGGGCTGCGTaGGCCATGTCCTCCACAGATACCCGCCTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: SSSTFRPSLRAA*AMSSTDTRLQG
Trigger: ACCCTGCAGGCGGGTATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGTCGACGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp AGAACCACCAGCCTTGACCGTCTCTCCAGTCGGACGTaGAGCTCCTTCAGGAGCCCTGTGACCCAGCGGACG +
Preference number: 6 (lower is better)
Translates to: RTTSLDRLSSRT*SSFRSPVTQRT
Trigger: CGTCCGCTGGGTCACAGGGCTCCTGAAGGAGCTGCACGTCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 72 bp TGCCTGTGGCCCGGGCTGAGGACGGCGTTGAGAAGCTaGGACTTGGAGTTGCTACTGACGTCCATGCGCACG +
Preference number: 6 (lower is better)
Translates to: CLWPGLRTALRS*DLELLLTSMRT
Trigger: CGTGCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp TGGCCCGGGCTGAGGACGGCGTTGAGAAGCTGGGACTaGGAGTTGCTACTGACGTCCATGCGCACGAAGGCG +
Preference number: 6 (lower is better)
Translates to: WPGLRTALRSWD*ELLLTSMRTKA
Trigger: CGCCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp CAGTCCCACTGCCTGTGGCCCGGGCTGAGGACGGCGTaGAGAAGCTGGGACTTGGAGTTGCTACTGACGTCC +
Preference number: 6 (lower is better)
Translates to: QSHCLWPGLRTA*RSWDLELLLTS
Trigger: GGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp TGCCAGAAGCAGTCCCACTGCCTGTGGCCCGGGCTGAGGACGGCGTaGAGAAGCTGGGACTTGGAGTTGCTACTGACGTCCATGCGCACG +
Preference number: 6 (lower is better)
Translates to: CQKQSHCLWPGLRTA*RSWDLELLLTSMRT
Trigger: CGTGCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAGTGGGACTGCTTCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp GGACCGCAGCTCTTCCCTGTGGCAAACCGCAGCCCAAACATGGTGTaGAGGAGTGTGGACTTGCCCGTGCCTGGCACCCCGACGGTTGAC +
Preference number: 6 (lower is better)
Translates to: GPQLFPVANRSPNMV*RSVDLPVPGTPTVD
Trigger: GTCAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAACACCATGTTTGGGCTGCGGTTTGCCACAGGGAAGAGCTGCGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp TGGACAAGACCACGCTGTCTTCCCGGAAGCTCCCCATaGCCCTTGGGGGCTGGGACCACCATGTCCTCACAA +
Preference number: 6 (lower is better)
Translates to: WTRPRCLPGSSP*PLGAGTTMSSQ
Trigger: TTGTGAGGACATGGTGGTCCCAGCCCCCAAGGGGCATGGGGAGCTTCCGGGAAGACAGCGTGGTCTTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp TCCTGCACCCCCGAGGAGGGATCATGGCCGTTCTGCTaGATTCGAAGTTCTAGCAGCCGCCGCCTCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SCTPEEGSWPFC*IRSSSSRRLSS
Trigger: TGAGCTGAGGCGGCGGCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGGGGTGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp AACTCCTGCACCCCCGAGGAGGGATCATGGCCGTTCTaGTGCATTCGAAGTTCTAGCAGCCGCCGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: NSCTPEEGSWPF*CIRSSSSRRLS
Trigger: GCTGAGGCGGCGGCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGGGGTGCAGGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp TTCACTGTAGGCCAAGCTCACTGCGGCCATGGGAGGTaGTCCGTGCCACAGGCCTGGGATGTGCCAGATGTG +
Preference number: 6 (lower is better)
Translates to: FTVGQAHCGHGR*SVPQAWDVPDV
Trigger: CACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTACAGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 72 bp ATATGGCTTCACTGTAGGCCAAGCTCACTGCGGCCATaGGAGGTGCTCCGTGCCACAGGCCTGGGATGTGCC +
Preference number: 6 (lower is better)
Translates to: IWLHCRPSSLRP*EVLRATGLGCA
Trigger: GGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTACAGTGAAGCCATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp GGGCTGAGGACGGCGTTGAGAAGCTGGGACTTGGAGTaGCTACTGACGTCCATGCGCACGAAGGCGAAGGCG +
Preference number: 6 (lower is better)
Translates to: GLRTALRSWDLE*LLTSMRTKAKA
Trigger: CGCCTTCGCCTTCGTGCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp TGCCTGGCACCCCGACGGTTGACAGAACCACCAGCCTaGACCGTCTCTCCAGTCGGACGTGCAGCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: CLAPRRLTEPPA*TVSPVGRAAPS
Trigger: TGAAGGAGCTGCACGTCCGACTGGAGAGACGGTCAAGGCTGGTGGTTCTGTCAACCGTCGGGGTGCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp CTCTTCCCTGTGGCAAACCGCAGCCCAAACATGGTGTaGAGGAGTGTGGACTTGCCCGTGCCTGGCACCCCG +
Preference number: 6 (lower is better)
Translates to: LFPVANRSPNMV*RSVDLPVPGTP
Trigger: CGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAACACCATGTTTGGGCTGCGGTTTGCCACAGGGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp CCTGTGGCAAACCGCAGCCCAAACATGGTGTTGAGGAGTGTGGACTaGCCCGTGCCTGGCACCCCGACGGTTGACAGAACCACCAGCCTT +
Preference number: 6 (lower is better)
Translates to: PVANRSPNMVLRSVD*PVPGTPTVDRTTSL
Trigger: AAGGCTGGTGGTTCTGTCAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAACACCATGTTTGGGCTGCGGTTTGCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp TCTTCCCTGTGGCAAACCGCAGCCCAAACATGGTGTTaGGGAGTGTGGACTTGCCCGTGCCTGGCACCCCGA +
Preference number: 6 (lower is better)
Translates to: SSLWQTAAQTWC*GVWTCPCLAPR
Trigger: TCGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAACACCATGTTTGGGCTGCGGTTTGCCACAGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp ACTCCTCACAGTCCTCGTCGACCTTTAGGCCCAGTTTaGGGGCTGCGTGCGCCATGTCCTCCACAGATACCC +
Preference number: 6 (lower is better)
Translates to: TPHSPRRPLGPV*GLRAPCPPQIP
Trigger: GGGTATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGTCGACGAGGACTGTGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CCA 72 bp CCCGAGATGAACTCCTGCACCCCCGAGGAGGGATCATaGCCGTTCTGCTGCATTCGAAGTTCTAGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: PEMNSCTPEEGS*PFCCIRSSSSR
Trigger: GCGGCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGATCCCTCCTCGGGGGTGCAGGAGTTCATCTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp CACTCCTCACAGTCCTCGTCGACCTTTAGGCCCAGTTaGCGGGCTGCGTGCGCCATGTCCTCCACAGATACC +
Preference number: 6 (lower is better)
Translates to: HSSQSSSTFRPS*RAACAMSSTDT
Trigger: GGTATCTGTGGAGGACATGGCGCACGCAGCCCGCAAACTGGGCCTAAAGGTCGACGAGGACTGTGAGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp AACCGCAGCCCAAACATGGTGTTGAGGAGTGTGGACTaGCCCGTGCCTGGCACCCCGACGGTTGACAGAACC +
Preference number: 6 (lower is better)
Translates to: NRSPNMVLRSVD*PVPGTPTVDRT
Trigger: GGTTCTGTCAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACACTCCTCAACACCATGTTTGGGCTGCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp ATTTCTACCAACCCATCCGAAATCTCCCGGGCATTGGTGCCCAAGTaGAGGTCCCGATGCCAGAAGCAGTCCCACTGCCTGTGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: ISTNPSEISRALVPK*RSRCQKQSHCLWPG
Trigger: CCCGGGCCACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGCCCGGGAGATTTCGGATGGGTTGGTAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp ACCCATCCGAAATCTCCCGGGCATTGGTGCCCAAGTTaGGGTCCCGATGCCAGAAGCAGTCCCACTGCCTGT +
Preference number: 6 (lower is better)
Translates to: THPKSPGHWCPS*GPDARSSPTAC
Trigger: ACAGGCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGCCCGGGAGATTTCGGATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp GAGCGGCTCTCCGGCTGTCAGCAAAGGGTCTGCATCTaGCCGGATCCTGACATTCTGGGTACGTCTCAACGA +
Preference number: 6 (lower is better)
Translates to: ERLSGCQQRVCI*PDPDILGTSQR
Trigger: TCGTTGAGACGTACCCAGAATGTCAGGATCCGGGCAGATGCAGACCCTTTGCTGACAGCCGGAGAGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS CCA 72 bp TTCCATCTGGCTCTCCTTCTCCACAGGCCTGGCGTCTaGGAGCACGTCCAGCACCATAGTGGTATTCCTGGC +
Preference number: 6 (lower is better)
Translates to: FHLALLLHRPGV*EHVQHHSGIPG
Trigger: GCCAGGAATACCACTATGGTGCTGGACGTGCTCCCAGACGCCAGGCCTGTGGAGAAGGAGAGCCAGATGGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000467410.1
ENST00000497914.5
CDS CCA 72 bp GGGGCTGGGACCACCATGTCCTCACAATGCCCCGCATaGCCCACAGCAGAAATGTATGGTAGTGGTTCTCCG +
Preference number: 6 (lower is better)
Translates to: GAGTTMSSQCPA*PTAEMYGSGSP
Trigger: CGGAGAACCACTACCATACATTTCTGCTGTGGGCCATGCGGGGCATTGTGAGGACATGGTGGTCCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp CGGCTGTCAGCAAAGGGTCTGCATCTGCCCGGATCCTaGCATTCTGGGTACGTCTCAACGACGCGGCAAACA +
Preference number: 6 (lower is better)
Translates to: RLSAKGLHLPGS*HSGYVSTTRQT
Trigger: TGTTTGCCGCGTCGTTGAGACGTACCCAGAATGTCAGGATCCGGGCAGATGCAGACCCTTTGCTGACAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS CCA 72 bp AGCAAAGGGTCTGCATCTGCCCGGATCCTGACATTCTaGGTACGTCTCAACGACGCGGCAAACAAGCGTCCA +
Preference number: 6 (lower is better)
Translates to: SKGSASARILTF*VRLNDAANKRP
Trigger: TGGACGCTTGTTTGCCGCGTCGTTGAGACGTACCCAGAATGTCAGGATCCGGGCAGATGCAGACCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS CCA 72 bp CACTTCTGCCCAGTGTGTGGCCCTTGGCAGGTTGTTTaGAAGCTCTGGGCCCAGTATCCTGATCTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: HFCPVCGPWQVV*KLWAQYPDLLE
Trigger: TTCCAACAGATCAGGATACTGGGCCCAGAGCTTCCAAACAACCTGCCAAGGGCCACACACTGGGCAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446958.1
CDS CAA 90 bp GCTGCTGGAATGTCCTTGGTTTCAGCTAGACTGATCACGGTGACATaGCTCAGTCCCATGAGCAGAGTGGCCAAGGAAGCCTCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: AAGMSLVSARLITVT*LSPMSRVAKEASSS
Trigger: TGAGCTGGAGGCTTCCTTGGCCACTCTGCTCATGGGACTGAGCAATGTCACCGTGATCAGTCTAGCTGAAACCAAGGACATTCCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp TTCCTGGTAATCCTCTCCATCCGGTCTTTCGCTTTCTaGCACTCCTCACAGTCCTCGTCGACCTTTAGGCCC +
Preference number: 6 (lower is better)
Translates to: FLVILSIRSFAF*HSSQSSSTFRP
Trigger: GGGCCTAAAGGTCGACGAGGACTGTGAGGAGTGTCAGAAAGCGAAAGACCGGATGGAGAGGATTACCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp TTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTTaGCCAGTAATTCCACTTCCGGGCGACGCCATGAGC +
Preference number: 6 (lower is better)
Translates to: FLGLLLPNLNAL*PVIPLPGDAMS
Trigger: GCTCATGGCGTCGCCCGGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443736.5
CDS CCA 72 bp TGTATGGTAGTGGTTCTCCGAGTCAGGCAACACGAGTaGGAGTGCAAACTGGCAGAGGGCCATTTTCAACGC +
Preference number: 6 (lower is better)
Translates to: CMVVVLRVRQHE*ECKLAEGHFQR
Trigger: GCGTTGAAAATGGCCCTCTGCCAGTTTGCACTCCCACTCGTGTTGCCTGACTCGGAGAACCACTACCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp GAAATTTCTACCAACCCATCCGAAATCTCCCGGGCATaGGTGCCCAAGTTGAGGTCCCGATGCCAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: EISTNPSEISRA*VPKLRSRCQKQ
Trigger: CTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGCCCGGGAGATTTCGGATGGGTTGGTAGAAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp TCTGGGAGCACGTCCAGCACCATAGTGGTATTCCTGGCATCAGCATaGAGGGCCTGCAACTTCCTGAGGAAATTCCAGGGCAAGTCTTTG +
Preference number: 6 (lower is better)
Translates to: SGSTSSTIVVFLASA*RACNFLRKFQGKSL
Trigger: CAAAGACTTGCCCTGGAATTTCCTCAGGAAGTTGCAGGCCCTCAATGCTGATGCCAGGAATACCACTATGGTGCTGGACGTGCTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000467410.1
ENST00000497914.5
CDS CAA 90 bp AAAAACCAGGAAATTTCTACCAACCCATCCGAAATCTCCCGGGCATaGGTGCCCAAGTTGAGGTCCCGATGCCAGAAGCAGTCCCACTGC +
Preference number: 6 (lower is better)
Translates to: KNQEISTNPSEISRA*VPKLRSRCQKQSHC
Trigger: GCAGTGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGCCCGGGAGATTTCGGATGGGTTGGTAGAAATTTCCTGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp CACGCTAAAAGAAACGGACTCCTTGGAGATCCTGAATaGTGGCTGGGGCAAGGAAAGAACAGGAGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: HAKRNGLLGDPE*WLGQGKNRRSL
Trigger: CAGGCTCCTCCTGTTCTTTCCTTGCCCCAGCCATCATTCAGGATCTCCAAGGAGTCCGTTTCTTTTAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS GCA 72 bp TTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTTaGCCAGTAATTCCACTTCTATCCCGGGCGACGCCA +
Preference number: 6 (lower is better)
Translates to: FLGLLLPNLNAL*PVIPLLSRATP
Trigger: TGGCGTCGCCCGGGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453200.6
CDS CCA 72 bp AAACTGATCTGCAGAGAGTCCTGGAGGCTGAGTTTCTaGACCTGGTACGTCTCTAGGCCCAAAAGTGACAGC +
Preference number: 6 (lower is better)
Translates to: KLICRESWRLSF*TWYVSRPKSDS
Trigger: GCTGTCACTTTTGGGCCTAGAGACGTACCAGGTCCAGAAACTCAGCCTCCAGGACTCTCTGCAGATCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000467410.1
ENST00000474376.1
ENST00000497914.5
CDS CAA 72 bp ATGTCCTTGGTTTCAGCTAGACTGATCACGGTGACATaGCTCAGTCCCATGAGCAGAGTGGCCAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: MSLVSARLITVT*LSPMSRVAKEA
Trigger: GGCTTCCTTGGCCACTCTGCTCATGGGACTGAGCAATGTCACCGTGATCAGTCTAGCTGAAACCAAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp ATTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTaGCCCAGTAATTCCACTTCCGGGCGACGCCATGAG +
Preference number: 6 (lower is better)
Translates to: ISGATSPKSECP*PSNSTSGRRHE
Trigger: CTCATGGCGTCGCCCGGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443736.5
CDS CAA 72 bp ATTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTaGCCCAGTAATTCCACTTCTATCCCGGGCGACGCC +
Preference number: 6 (lower is better)
Translates to: ISGATSPKSECP*PSNSTSIPGDA
Trigger: GGCGTCGCCCGGGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453200.6
CDS CAA 72 bp AAGACAAAGAAAACACTTCTGCCCAGTGTGTGGCCCTaGGCAGGTTGTTTGGAAGCTCTGGGCCCAGTATCC +
Preference number: 6 (lower is better)
Translates to: KTKKTLLPSVWP*AGCLEALGPVS
Trigger: GGATACTGGGCCCAGAGCTTCCAAACAACCTGCCAAGGGCCACACACTGGGCAGAAGTGTTTTCTTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446958.1
CDS CAA 90 bp GATGCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTaGCCCAGTAATTCCACTTCTATCCCGGGCGACGCCATGAGCGCA +
Preference number: 6 (lower is better)
Translates to: DAFISGATSPKSECP*PSNSTSIPGDAMSA
Trigger: TGCGCTCATGGCGTCGCCCGGGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453200.6
CDS TCA 72 bp GAGGAGATTTCTGTCAAGAGCTTAAACTGCAGCCAGTaGGACCCGATGTCACCTCTCAGGTTCAGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: EEISVKSLNCSQ*DPMSPLRFRKA
Trigger: GGCCTTTCTGAACCTGAGAGGTGACATCGGGTCTCACTGGCTGCAGTTTAAGCTCTTGACAGAAATCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp CTGCACACTCACAGCCGTCTCACCAGCTCAATGAGCTaGTGGATGTTTTTGTTTTGGTTCGACAAGCCGTTC +
Preference number: 6 (lower is better)
Translates to: LHTHSRLTSSMS*WMFLFWFDKPF
Trigger: GAACGGCTTGTCGAACCAAAACAAAAACATCCAGCAGCTCATTGAGCTGGTGAGACGGCTGTGAGTGTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp GCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATaGCCTTTGCCCAGTAATTCCACTTCCGGGCGACGC +
Preference number: 6 (lower is better)
Translates to: AFISGATSPKSE*PLPSNSTSGRR
Trigger: GCGTCGCCCGGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443736.5
CDS CCA 72 bp ATCTGCAGAGAGTCCTGGAGGCTGAGTTTCTGGACCTaGTACGTCTCTAGGCCCAAAAGTGACAGCATTTCT +
Preference number: 6 (lower is better)
Translates to: ICRESWRLSFWT*YVSRPKSDSIS
Trigger: AGAAATGCTGTCACTTTTGGGCCTAGAGACGTACCAGGTCCAGAAACTCAGCCTCCAGGACTCTCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000467410.1
ENST00000474376.1
ENST00000497914.5
CDS CCA 72 bp TTCTCCGAGTCAGGCAACACGAGTGGGAGTGCAAACTaGCAGAGGGCCATTTTCAACGCTATTTCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: FSESGNTSGSAN*QRAIFNAISCC
Trigger: GCAACAAGAAATAGCGTTGAAAATGGCCCTCTGCCAGTTTGCACTCCCACTCGTGTTGCCTGACTCGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp GGATCCTCTTCACGAAGCTGTCGCTGTCAGTGCTGCTaGCCTTTACCAGGACATGTGAGTGGTCTATTTTCA +
Preference number: 6 (lower is better)
Translates to: GSSSRSCRCQCC*PLPGHVSGLFS
Trigger: TGAAAATAGACCACTCACATGTCCTGGTAAAGGTCAGCAGCACTGACAGCGACAGCTTCGTGAAGAGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp ACCATAGTGGTATTCCTGGCATCAGCATTGAGGGCCTaGAACTTCCTGAGGAAATTCCAGGGCAAGTCTTTG +
Preference number: 6 (lower is better)
Translates to: TIVVFLASALRA*NFLRKFQGKSL
Trigger: CAAAGACTTGCCCTGGAATTTCCTCAGGAAGTTGCAGGCCCTCAATGCTGATGCCAGGAATACCACTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000467410.1
ENST00000474376.1
ENST00000497914.5
CDS CCA 72 bp TTAAGAACCACTATTCTCAGGAGTTATATGACAGCCTaGGAAGACGCCCAGGATGTAGGAACAGGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LRTTILRSYMTA*EDAQDVGTGSR
Trigger: CCTGCTCCCTGTTCCTACATCCTGGGCGTCTTCCCAGGCTGTCATATAACTCCTGAGAATAGTGGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426198.5
ENST00000455877.5
ENST00000477768.1
CDS CAA 90 bp TATTTCCTAACTGTCCACGGAAAGGGCCAAGAAGCAAAGACACTGTaGTGGCAATGGGCATGCCTAGCACCCTTTAATACCTTCCACGCT +
Preference number: 6 (lower is better)
Translates to: YFLTVHGKGQEAKTL*WQWACLAPFNTFHA
Trigger: AGCGTGGAAGGTATTAAAGGGTGCTAGGCATGCCCATTGCCACAACAGTGTCTTTGCTTCTTGGCCCTTTCCGTGGACAGTTAGGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS TCA 72 bp GGTTTGTGTTGCGCTTCCCACGGTAGGGACTCAGGATaGAGTAGTATTTTGTGGTTGACTCCTTCATGGAGT +
Preference number: 6 (lower is better)
Translates to: GLCCASHGRDSG*SSILWLTPSWS
Trigger: ACTCCATGAAGGAGTCAACCACAAAATACTACTTCATCCTGAGTCCCTACCGTGGGAAGCGCAACACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS GCA 72 bp GGCCAAGAAGCAAAGACACTGTTGTGGCAATGGGCATaGCTAGCACCCTTTAATACCTTCCACGCTAAAAGA +
Preference number: 6 (lower is better)
Translates to: GQEAKTLLWQWA*LAPFNTFHAKR
Trigger: TCTTTTAGCGTGGAAGGTATTAAAGGGTGCTAGGCATGCCCATTGCCACAACAGTGTCTTTGCTTCTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS GCA 72 bp GCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATaGCCTTTGCCCAGTAATTCCACTTCTATCCCGGGC +
Preference number: 6 (lower is better)
Translates to: AFISGATSPKSE*PLPSNSTSIPG
Trigger: GCCCGGGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453200.6
CDS GCA 72 bp TTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTTaGCCAGTAATTCCACTTCTATCCTGTAGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: FLGLLLPNLNAL*PVIPLLSCSPS
Trigger: GCTGGGACTACAGGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477768.1
CDS TCA 72 bp GCAGAAAGAGAAGGCTCTCTTGCTCACATCAGAACATaGAATGTGGAGGGGGATGCTGCAGTCAGAATAGTA +
Preference number: 6 (lower is better)
Translates to: AEREGSLAHIRT*NVEGDAAVRIV
Trigger: TACTATTCTGACTGCAGCATCCCCCTCCACATTTCATGTTCTGATGTGAGCAAGAGAGCCTTCTCTTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS CAA 72 bp CTCAGAAATGCATGCAGAATAGCTGCTGGAATGTCCTaGGTTTCAGCTAGACTGATCACGGTGACATTGCTC +
Preference number: 6 (lower is better)
Translates to: LRNACRIAAGMS*VSARLITVTLL
Trigger: GAGCAATGTCACCGTGATCAGTCTAGCTGAAACCAAGGACATTCCAGCAGCTATTCTGCATGCATTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp GCCTGCTTCTCTCCACTGTTGGAAAATCATTGTCCTGAGCCTCATTaGTACCATCTCCATAACGGAACTCGCAATCATCTCCTTCCATTT +
Preference number: 6 (lower is better)
Translates to: ACFSPLLENHCPEPH*YHLHNGTRNHLLPF
Trigger: AAATGGAAGGAGATGATTGCGAGTTCCGTTATGGAGATGGTACAAATGAGGCTCAGGACAATGATTTTCCAACAGTGGAGAGAAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000474376.1
CDS CAA 90 bp TTTTCTAACCTCAGAAATGCATGCAGAATAGCTGCTGGAATGTCCTaGGTTTCAGCTAGACTGATCACGGTGACATTGCTCAGTCCCATG +
Preference number: 6 (lower is better)
Translates to: FSNLRNACRIAAGMS*VSARLITVTLLSPM
Trigger: CATGGGACTGAGCAATGTCACCGTGATCAGTCTAGCTGAAACCAAGGACATTCCAGCAGCTATTCTGCATGCATTTCTGAGGTTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS TCA 72 bp ACTTGCAGAGGCGCAATGGAACTGGAGGCACTCGTGTaGACTGTGATTTCTATATGCATGCTTATGTGCATA +
Preference number: 6 (lower is better)
Translates to: TCRGAMELEALV*TVISICMLMCI
Trigger: TATGCACATAAGCATGCATATAGAAATCACAGTTCACACGAGTGCCTCCAGTTCCATTGCGCCTCTGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS TCA 72 bp TGGTACGTCTCTAGGCCCAAAAGTGACAGCATTTCTTaGAGCCTGCTTCTCTCCACTGTTGGAAAATCATTG +
Preference number: 6 (lower is better)
Translates to: WYVSRPKSDSIS*SLLLSTVGKSL
Trigger: CAATGATTTTCCAACAGTGGAGAGAAGCAGGCTTCAAGAAATGCTGTCACTTTTGGGCCTAGAGACGTACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000467410.1
ENST00000474376.1
CDS GCA 72 bp TGCTCACATCAGAACATGAAATGTGGAGGGGGATGCTaGAGTCAGAATAGTATCATTTTAGAGCAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: CSHQNMKCGGGC*SQNSIILEQGA
Trigger: TGCACCCTGCTCTAAAATGATACTATTCTGACTGCAGCATCCCCCTCCACATTTCATGTTCTGATGTGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS CAA 72 bp ATTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTaGCCCAGTAATTCCACTTCTGTAAAGCTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: ISGATSPKSECP*PSNSTSVKLFG
Trigger: CCCAAAGAGCTTTACAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS CAA 90 bp GCCCAGTATCCTGATCTGTTGGAAAATCATTGTCCTGAGCCTCATTaGTACCATCTCCATAACGGAACTCGCAATCATCTCCTTCCATTT +
Preference number: 6 (lower is better)
Translates to: AQYPDLLENHCPEPH*YHLHNGTRNHLLPF
Trigger: AAATGGAAGGAGATGATTGCGAGTTCCGTTATGGAGATGGTACAAATGAGGCTCAGGACAATGATTTTCCAACAGATCAGGATACTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446958.1
CDS TCA 72 bp GAGGCGCAATGGAACTGGAGGCACTCGTGTGAACTGTaGTTTCTATATGCATGCTTATGTGCATATGTGTTT +
Preference number: 6 (lower is better)
Translates to: EAQWNWRHSCEL*FLYACLCAYVF
Trigger: AAACACATATGCACATAAGCATGCATATAGAAATCACAGTTCACACGAGTGCCTCCAGTTCCATTGCGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS GCA 72 bp TCTTGCTCACATCAGAACATGAAATGTGGAGGGGGATaGTGCAGTCAGAATAGTATCATTTTAGAGCAGGGT +
Preference number: 6 (lower is better)
Translates to: SCSHQNMKCGGG*CSQNSIILEQG
Trigger: ACCCTGCTCTAAAATGATACTATTCTGACTGCAGCATCCCCCTCCACATTTCATGTTCTGATGTGAGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS GCA 72 bp GATAATAAATACATGGGCAGAAAGAGAAGGCTCTCTTaGTCACATCAGAACATGAAATGTGGAGGGGGATGC +
Preference number: 6 (lower is better)
Translates to: DNKYMGRKRRLS*SHQNMKCGGGC
Trigger: GCATCCCCCTCCACATTTCATGTTCTGATGTGAGCAAGAGAGCCTTCTCTTTCTGCCCATGTATTTATTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS GCA 72 bp TTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTTaGCCAGTAATTCCACTTCTATCAGAGTTAAGAACC +
Preference number: 6 (lower is better)
Translates to: FLGLLLPNLNAL*PVIPLLSELRT
Trigger: GGTTCTTAACTCTGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426198.5
CDS GCA 72 bp GCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATaGCCTTTGCCCAGTAATTCCACTTCTATCCTAAGG +
Preference number: 6 (lower is better)
Translates to: AFISGATSPKSE*PLPSNSTSILR
Trigger: CCTTAGGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478747.5
CDS CAA 72 bp TCTCCACTGTTGGAAAATCATTGTCCTGAGCCTCATTaGTACCATCTCCATAACGGAACTCGCAATCATCTC +
Preference number: 6 (lower is better)
Translates to: SPLLENHCPEPH*YHLHNGTRNHL
Trigger: GAGATGATTGCGAGTTCCGTTATGGAGATGGTACAAATGAGGCTCAGGACAATGATTTTCCAACAGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000439702.5
ENST00000443736.5
ENST00000453200.6
ENST00000455877.5
ENST00000474376.1
CDS CAA 72 bp CCTGATCTGTTGGAAAATCATTGTCCTGAGCCTCATTaGTACCATCTCCATAACGGAACTCGCAATCATCTC +
Preference number: 6 (lower is better)
Translates to: PDLLENHCPEPH*YHLHNGTRNHL
Trigger: GAGATGATTGCGAGTTCCGTTATGGAGATGGTACAAATGAGGCTCAGGACAATGATTTTCCAACAGATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446958.1
CDS GCA 72 bp GCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATaGCCTTTGCCCAGTAATTCCACTTCTATCAGAGTT +
Preference number: 6 (lower is better)
Translates to: AFISGATSPKSE*PLPSNSTSIRV
Trigger: AACTCTGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426198.5
CDS CCA 72 bp CCAGCAATTAGTGAGTCCACATGGATAATAAATACATaGGCAGAAAGAGAAGGCTCTCTTGCTCACATCAGA +
Preference number: 6 (lower is better)
Translates to: PAISESTWIINT*AEREGSLAHIR
Trigger: TCTGATGTGAGCAAGAGAGCCTTCTCTTTCTGCCCATGTATTTATTATCCATGTGGACTCACTAATTGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336086.10
CDS CCA 72 bp CATCTCCTTCCATTTCTCTCCATTCCAAATCTGCAATaGCCACAGCTGTTCGTCTCTCTGATGCTTTTATTT +
Preference number: 6 (lower is better)
Translates to: HLLPFLSIPNLQ*PQLFVSLMLLF
Trigger: AAATAAAAGCATCAGAGAGACGAACAGCTGTGGCCATTGCAGATTTGGAATGGAGAGAAATGGAAGGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000426198.5
ENST00000443736.5
ENST00000446958.1
ENST00000453200.6
ENST00000497914.5
CDS CCA 72 bp CTGTCAGTGCTGCTGACCTTTACCAGGACATGTGAGTaGTCTATTTTCAGCACAGGAATTAACTTATTCAGA +
Preference number: 6 (lower is better)
Translates to: LSVLLTFTRTCE*SIFSTGINLFR
Trigger: TCTGAATAAGTTAATTCCTGTGCTGAAAATAGACCACTCACATGTCCTGGTAAAGGTCAGCAGCACTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp ATTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTaGCCCAGTAATTCCACTTCTATCAGAGTTAAGAAC +
Preference number: 6 (lower is better)
Translates to: ISGATSPKSECP*PSNSTSIRVKN
Trigger: GTTCTTAACTCTGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426198.5
CDS CAA 72 bp TTCTCTCTGTTGGAAAATCATTGTCCTGAGCCTCATTaGTACCATCTCCATAACGGAACTCGCAATCATCTC +
Preference number: 6 (lower is better)
Translates to: FSLLENHCPEPH*YHLHNGTRNHL
Trigger: GAGATGATTGCGAGTTCCGTTATGGAGATGGTACAAATGAGGCTCAGGACAATGATTTTCCAACAGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497914.5
CDS TCA 72 bp ACGGTAGGGACTCAGGATGAAGTAGTATTTTGTGGTTaGCTCCTTCATGGAGTACAGCAATTTGTATTCCTT +
Preference number: 6 (lower is better)
Translates to: TVGTQDEVVFCG*LLHGVQQFVFL
Trigger: AAGGAATACAAATTGCTGTACTCCATGAAGGAGTCAACCACAAAATACTACTTCATCCTGAGTCCCTACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 90 bp GATGCTTTTATTTCTGGGGCTACTTCTCCCAAATCTGAATGCCCTTaGCCCAGTAATTCCACTTCTATCAGAGTTAAGAACCACTATTCT +
Preference number: 6 (lower is better)
Translates to: DAFISGATSPKSECP*PSNSTSIRVKNHYS
Trigger: AGAATAGTGGTTCTTAACTCTGATAGAAGTGGAATTACTGGGCAAAGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426198.5
CDS CAA 90 bp GACTCCTTCATGGAGTACAGCAATTTGTATTCCTTCTTACTGATATaGTCAGTCAATATAAACACAGCGGAGGAGATTTCTGTCAAGAGC +
Preference number: 6 (lower is better)
Translates to: DSFMEYSNLYSFLLI*SVNINTAEEISVKS
Trigger: GCTCTTGACAGAAATCTCCTCCGCTGTGTTTATATTGACTGACAATATCAGTAAGAAGGAATACAAATTGCTGTACTCCATGAAGGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5
CDS CAA 72 bp ATGGAGTACAGCAATTTGTATTCCTTCTTACTGATATaGTCAGTCAATATAAACACAGCGGAGGAGATTTCT +
Preference number: 6 (lower is better)
Translates to: MEYSNLYSFLLI*SVNINTAEEIS
Trigger: AGAAATCTCCTCCGCTGTGTTTATATTGACTGACAATATCAGTAAGAAGGAATACAAATTGCTGTACTCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336086.10
ENST00000402306.7
ENST00000443736.5
ENST00000453200.6
ENST00000497914.5