Pregenerated sensors for UQCRQ (Homo sapiens)
Ensembl gene IDs: ENSG00000164405Ensembl transcript IDs: ENST00000378665.1, ENST00000378667.1, ENST00000378670.8, ENST00000480372.1, ENST00000498309.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAACCAGCACTCGCCATAGCCCATGTCACCCACAAATGGTTAGATaGAGGAGTACCTGCAGCTACTTTCTTGTAGATAATGGAACAAAG | + |
|
Preference number: 1 (lower is better) Translates to: RTSTRHSPCHPQMVR*RSTCSYFLVDNGTK Trigger: CTTTGTTCCATTATCTACAAGAAAGTAGCTGCAGGTACTCCTGCATCTAACCATTTGTGGGTGACATGGGCTATGGCGAGTGCTGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR GCA 90 bp | TCCCTGACACATACTAATTACAATATAGTTAGTAGACTTTATTGTTaGTATGGGAGCAGAGGGCCAAGAACCAGCACTCGCCATAGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: SLTHTNYNIVSRLYC*YGSRGPRTSTRHSP Trigger: TGGGCTATGGCGAGTGCTGGTTCTTGGCCCTCTGCTCCCATAGCAACAATAAAGTCTACTAACTATATTGTAATTAGTATGTGTCAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR CAA 90 bp | CCTCAGGCTAAGGCCTGCCTTAGGAGGAAAGGCAGTAGAGCAAGCTaGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PQAKACLRRKGSRAS*SNRSPGQQAAQDGF Trigger: AAAGCCATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGCCTTTCCTCCTAAGGCAGGCCTTAGCCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGCAGTAGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGCTAAGAAGAGTATTTaGGGCCCAGAGCACCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: KGSRASLSNRSPGQQAAQAKKSI*GPEHHG Trigger: GCCATGGTGCTCTGGGCCTCAAATACTCTTCTTAGC...CTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGCAGTAGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGACAAAGGGGGAGCCCTaGTCTTTCACCAAAACCCGA | + |
|
Preference number: 2 (lower is better) Translates to: KGSRASLSNRSPGQQAAQTKGEP*SFTKTR Trigger: TCGGGTTTTGGTGAAAGAGCAGGGCTCCCCCTTTGT...CTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGGCCTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCCTCAGGCTAAGGCCTaGCTTAGGAGGAAAGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VGLLAQKQKTAVEAKRSPPQAKA*LRRKGS Trigger: ACTGCCTTTCCTCCTAAGGCAGGCCTTAGCCTGAGG...AGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAGGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCATCCGCTTCAAGACTCATGCTaGGGAGGGGCGCTTCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLAQKQKTAVEAKRSPHPLQDSC*GGALHE Trigger: TTCATGAAGCGCCCCTCCTCAGCATGAGTCTTGAAG...CGGATGAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTGGCCTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCATCCGTTTTATAGCTaGTATCCCCTCAGGCTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VGLLAQKQKTAVEAKRSPHPFYS*YPLRLR Trigger: CCTTAGCCTGAGGGGATATCAGCTATAAAACGGATG...AGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAGGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR TCA 90 bp | AACCACATATGGTTGAAAACATTGTTGGCCTCCTGGCACAGAAACAGAAAACTGAGGCACAGATGGCAGTaGGCCGAGATCACACCACTG | + |
|
Preference number: 2 (lower is better) Translates to: NHIWLKTLLASWHRNRKLRHRWQ*AEITPL Trigger: CAGTGGTGTGATCTCGGCTCACTGCCATCTGTGCCT...CAGTTTTCTGTTTCTGTGCCAGGAGGCCAACAATGTTTTCAACCATATGTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACTGCTGTGGAGGCTAAGAGATCACCTCATCCGTTTTATAGCTGATATCCCCCCACAAATGGTTAGATaGAGGAGTACCTGCAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: KLLWRLRDHLIRFIADIPPQMVR*RSTCSY Trigger: GTAGCTGCAGGTACTCCTGCATCTAACCATTTGTGG...GGGGATATCAGCTATAAAACGGATGAGGTGATCTCTTAGCCTCCACAGCAGTTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCACATATGGTTGAAAACATTGTTGGCCTCCTGGCACAGAAACAGAAAACTGCATGTCACCCACAAATaGTTAGATGCAGGAGTACCT | + |
|
Preference number: 2 (lower is better) Translates to: NHIWLKTLLASWHRNRKLHVTHK*LDAGVP Trigger: AGGTACTCCTGCATCTAACCATTTGTGGGTGACATG...CAGTTTTCTGTTTCTGTGCCAGGAGGCCAACAATGTTTTCAACCATATGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCAGTAGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGGGCGCTTCATGAACTaGAATATTAGTGGTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: KGSRASLSNRSPGQQAAQGRFMN*NISGHT Trigger: TGTGTGACCACTAATATTCAAGTTCATGAAGCGCCC...CTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR TCA 72 bp | GTGGAGGCTAAGAGATCACCTCATCCGTTTTATAGCTaGTATCCCCTCAGGCTAAGGCCTGCCTTAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VEAKRSPHPFYS*YPLRLRPALGG Trigger: TCCTCCTAAGGCAGGCCTTAGCCTGAGGGGATATCAGCTATAAAACGGATGAGGTGATCTCTTAGCCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR CCA 72 bp | GAACCAGCACTCGCCATAGCCCATGTCACCCACAAATaGTTAGATGCAGGAGTACCTGCAGCTACTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EPALAIAHVTHK*LDAGVPAATFL Trigger: CAAGAAAGTAGCTGCAGGTACTCCTGCATCTAACCATTTGTGGGTGACATGGGCTATGGCGAGTGCTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGCTGTGGAGGCTAAGAGATCACCTCATCCGTTTTATAGCTGATATCCCCCAGCCCAGGATGGCTTaGAATCCGACCCAACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLLWRLRDHLIRFIADIPQPRMA*NPTQQK Trigger: TTTTTGTTGGGTCGGATTCAAAGCCATCCTGGGCTG...GGGGATATCAGCTATAAAACGGATGAGGTGATCTCTTAGCCTCCACAGCAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR CCA 72 bp | TTGTTGGCCTCCTGGCACAGAAACAGAAAACTGCTGTaGAGGCTAAGAGATCACCTCATCCGTTTTATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLASWHRNRKLL*RLRDHLIRFIA Trigger: AGCTATAAAACGGATGAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAGGCCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR GCA 72 bp | ACTCGCCATAGCCCATGTCACCCACAAATGGTTAGATaGAGGAGTACCTGCAGCTACTTTCTTGTAGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: TRHSPCHPQMVR*RSTCSYFLVDN Trigger: ATTATCTACAAGAAAGTAGCTGCAGGTACTCCTGCATCTAACCATTTGTGGGTGACATGGGCTATGGCGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTAGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGACTCGCGGCCCATTGTaGCGGCGGCCAGGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVEQACPTAVLGSKQPRMTRGPL*RRPGLS Trigger: GCTGAGCCCTGGCCGCCGCCACAATGGGCCGCGAGT...CATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR CAA 72 bp | AAGGCCTGCCTTAGGAGGAAAGGCAGTAGAGCAAGCTaGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KACLRRKGSRAS*SNRSPGQQAAQ Trigger: CTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGCCTTTCCTCCTAAGGCAGGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGGCTTTAGGCACAGATGGCAGTaGGCCGAGATCACACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RASLSNRSPGQQAAQDGFRHRWQ*AEITPL Trigger: CAGTGGTGTGATCTCGGCTCACTGCCATCTGTGCCT...AAAGCCATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR GCA 90 bp | GCTATGGGAGCAGAGGGCCAAGAACCAGCACTCGCCATAGCCCATGTCACCCACCCTCAGGCTAAGGCCTaGCTTAGGAGGAAAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMGAEGQEPALAIAHVTHPQAKA*LRRKGS Trigger: ACTGCCTTTCCTCCTAAGGCAGGCCTTAGCCTGAGG...GTGGGTGACATGGGCTATGGCGAGTGCTGGTTCTTGGCCCTCTGCTCCCATAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGGCTTTACAAAGGGGGAGCCCTaGTCTTTCACCAAAACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RASLSNRSPGQQAAQDGFTKGEP*SFTKTR Trigger: TCGGGTTTTGGTGAAAGAGCAGGGCTCCCCCTTTGT...AAAGCCATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCATCCGGTCCAACCGCAGTCCTaGGCAGCAAGCAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLAQKQKTAVEAKRSPHPVQPQS*AASSPG Trigger: TCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGAC...CGGATGAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR CAA 72 bp | ATCCCAGCTACTCGGAGGCTGAGACAGGAGAATCGTTaGAACCCAGGAGGCACAGATGGCAGTGAGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPATRRLRQENR*NPGGTDGSEPR Trigger: TCTCGGCTCACTGCCATCTGTGCCTCCTGGGTTCAAACGATTCTCCTGTCTCAGCCTCCGAGTAGCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | AGCACTCGCCATAGCCCATGTCACCCACAAATGGTTAGATGCAGGAGTACCTGCGCGCTGCTCGAACGGTaGCAAGCTGTAGCTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: STRHSPCHPQMVRCRSTCALLER*QAVADH Trigger: GTGATCAGCTACAGCTTGTCACCGTTCGAGCAGCGC...GCAGGTACTCCTGCATCTAACCATTTGTGGGTGACATGGGCTATGGCGAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGGCTTTCATCCGTTTTATAGCTaGTATCCCCTCAGGCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RASLSNRSPGQQAAQDGFHPFYS*YPLRLR Trigger: CCTTAGCCTGAGGGGATATCAGCTATAAAACGGATG...AAAGCCATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTAGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGAGTAGACTTTATTGTTaGTATGGGAGCAGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVEQACPTAVLGSKQPRMSRLYC*YGSRGP Trigger: TGGCCCTCTGCTCCCATAGCAACAATAAAGTCTACT...CATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTCGCCATAGCCCATGTCACCCACAAATGGTTAGATGCAGGAGTACCTGCAGAAAGACTCCCGAATaGGGCGCAGAACATTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STRHSPCHPQMVRCRSTCRKTPE*GAEHWG Trigger: TCCCCAATGTTCTGCGCCGCATTCGGGAGTCTTTCT...GCAGGTACTCCTGCATCTAACCATTTGTGGGTGACATGGGCTATGGCGAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR GCA 90 bp | GCTATGGGAGCAGAGGGCCAAGAACCAGCACTCGCCATAGCCCATGTCACCCACTACTTAATCTCTCTGTaGCCATTTCCTCATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMGAEGQEPALAIAHVTHYLISL*PFPHLP Trigger: TGGCAGATGAGGAAATGGGCACAGAGAGATTAAGTA...GTGGGTGACATGGGCTATGGCGAGTGCTGGTTCTTGGCCCTCTGCTCCCATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTAGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGAGCGTATTTTATGTGTaGCCCAGGGAAGCTAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVEQACPTAVLGSKQPRMSVFYV*PREAKR Trigger: TCTTTTAGCTTCCCTGGGCCACACATAAAATACGCT...CATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCATCTTCAAGACTCATGCTaGGGAGGGGCGCTTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLAQKQKTAVEAKRSPHLQDSC*GGALHE Trigger: TTCATGAAGCGCCCCTCCTCAGCATGAGTCTTGAAG...ATGAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTCGCCATAGCCCATGTCACCCACAAATGGTTAGATGCAGGAGTACCTGCCCACAAATGGTTAGATaGAGGAGTACCTGCAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: STRHSPCHPQMVRCRSTCPQMVR*RSTCSY Trigger: GTAGCTGCAGGTACTCCTGCATCTAACCATTTGTGG...GCAGGTACTCCTGCATCTAACCATTTGTGGGTGACATGGGCTATGGCGAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTGGGCAGCAAGCAGCCCAGGATGGCTTTGAATCCGACCCAACAAAAATTAGCCCAGGATGGCTTTaGATCCGACCCAACAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPGQQAAQDGFESDPTKISPGWL*IRPNKN Trigger: ATTTTTGTTGGGTCGGATTCAAAGCCATCCTGGGCT...AATTTTTGTTGGGTCGGATTCAAAGCCATCCTGGGCTGCTTGCTGCCCAGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | AACCACATATGGTTGAAAACATTGTTGGCCTCCTGGCACAGAAACAGAAAACTGGTGACAAGCTGTAGCTaGTCACATGCCGCATCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NHIWLKTLLASWHRNRKLVTSCS*SHAASA Trigger: CGCGGATGCGGCATGTGATCAGCTACAGCTTGTCAC...CAGTTTTCTGTTTCTGTGCCAGGAGGCCAACAATGTTTTCAACCATATGTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCATCCGCATGTCACCCACAAATaGTTAGATGCAGGAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAQKQKTAVEAKRSPHPHVTHK*LDAGVP Trigger: AGGTACTCCTGCATCTAACCATTTGTGGGTGACATG...CGGATGAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCATACTTTATTGTTGCTATaGGAGCAGAGGGCCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLAQKQKTAVEAKRSPHTLLLL*EQRAKN Trigger: GTTCTTGGCCCTCTGCTCCCATAGCAACAATAAAGT...ATGAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR CAA 72 bp | ACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGGCTTaGAATCCGACCCAACAAAAATTTGTAAACTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLGSKQPRMA*NPTQQKFVNFL Trigger: TAGAAAGTTTACAAATTTTTGTTGGGTCGGATTCAAAGCCATCCTGGGCTGCTTGCTGCCCAGGACTGCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | GGGCGCTTCATGAACTTGAATATTAGTGGTCACACAGGATTCTACTCACAAAAAGGCGCACAGATCATCTaGGGTCAGGAGTTCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GRFMNLNISGHTGFYSQKGAQII*GQEFQT Trigger: GGTCTGGAACTCCTGACCTCAGATGATCTGTGCGCC...TTTTTGTGAGTAGAATCCTGTGTGACCACTAATATTCAAGTTCATGAAGCGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTCGCCATAGCCCATGTCACCCACAAATGGTTAGATGCAGGAGTACCTGCGACTCCACCATTCACTaGTGTATAATTTCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: STRHSPCHPQMVRCRSTCDSTIH*CIISGK Trigger: TTTGCCAGAAATTATACAGCAGTGAATGGTGGAGTC...GCAGGTACTCCTGCATCTAACCATTTGTGGGTGACATGGGCTATGGCGAGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCATCCGGCCAGAGTAAATCTTTaGGGCTTTATGAACCACATA | + |
|
Preference number: 4 (lower is better) Translates to: LLAQKQKTAVEAKRSPHPARVNL*GFMNHI Trigger: TATGTGGTTCATAAAGCCTCAAAGATTTACTCTGGC...CGGATGAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR TCA 90 bp | GGGCGCTTCATGAACTTGAATATTAGTGGTCACACAGGATTCTACTCACAAAAAGACAGGAGAATCGTTTaGACCCAGGAGGCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GRFMNLNISGHTGFYSQKDRRIV*TQEAQM Trigger: CATCTGTGCCTCCTGGGTTCAAACGATTCTCCTGTC...TTTTTGTGAGTAGAATCCTGTGTGACCACTAATATTCAAGTTCATGAAGCGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| 3UTR CAA 72 bp | TTCAAGACTCATGCTGAGGAGGGGCGCTTCATGAACTaGAATATTAGTGGTCACACAGGATTCTACTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FKTHAEEGRFMN*NISGHTGFYSQ Trigger: TTGTGAGTAGAATCCTGTGTGACCACTAATATTCAAGTTCATGAAGCGCCCCTCCTCAGCATGAGTCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CCA 90 bp | GAGCATCACTTTAGTGCAAGACTCCACCATTCACTGCTGTATAATTTCTGGCAAAACAGAAAACTGCTGTaGAGGCTAAGAGATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: EHHFSARLHHSLLYNFWQNRKLL*RLRDHL Trigger: GAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTT...TTGCCAGAAATTATACAGCAGTGAATGGTGGAGTCTTGCACTAAAGTGATGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CCA 90 bp | AACCACATATGGTTGAAAACATTGTTGGCCTCCTGGCACAGAAACAGAAAACTGACATTGTTGGCCTCCTaGCACAGAAACAGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NHIWLKTLLASWHRNRKLTLLAS*HRNRKL Trigger: CAGTTTTCTGTTTCTGTGCCAGGAGGCCAACAATGT...CAGTTTTCTGTTTCTGTGCCAGGAGGCCAACAATGTTTTCAACCATATGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CCA 90 bp | GGGCGCTTCATGAACTTGAATATTAGTGGTCACACAGGATTCTACTCACAAAAATTTATGAACCACATATaGTTGAAAACATTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRFMNLNISGHTGFYSQKFMNHI*LKTLLA Trigger: GGCCAACAATGTTTTCAACCATATGTGGTTCATAAA...TTTTTGTGAGTAGAATCCTGTGTGACCACTAATATTCAAGTTCATGAAGCGCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS GCA 90 bp | CGCCTGCCCGGCCGCCAGCGCTCAGAGGGGAGGCGCAGTGACTGCTaGTGCTGCTGGGGTCCAGCCTCCCGCTCCCGCGGGCCCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLPGRQRSEGRRSDC*CCWGPASRSRGPKA Trigger: TGCCTTGGGCCCGCGGGAGCGGGAGGCTGGACCCCAGCAGCAGCAGCAGTCACTGCGCCTCCCCTCTGAGCGCTGGCGGCCGGGCAGGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000480372.1 ENST00000498309.1 |
||
| CDS GCA 90 bp | CTGCCCGGCCGCCAGCGCTCAGAGGGGAGGCGCAGTGACTGCTGCTaGTGCTGGGGTCCAGCCTCCCGCTCCCGCGGGCCCAAGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LPGRQRSEGRRSDCC*CWGPASRSRGPKAL Trigger: GAGTGCCTTGGGCCCGCGGGAGCGGGAGGCTGGACCCCAGCAGCAGCAGCAGTCACTGCGCCTCCCCTCTGAGCGCTGGCGGCCGGGCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000480372.1 ENST00000498309.1 |
||
| CDS CCA 90 bp | GGCCGCCAGCGCTCAGAGGGGAGGCGCAGTGACTGCTGCTGCTGCTaGGGTCCAGCCTCCCGCTCCCGCGGGCCCAAGGCACTCACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRQRSEGRRSDCCCC*GPASRSRGPKALTR Trigger: CCGCGTGAGTGCCTTGGGCCCGCGGGAGCGGGAGGCTGGACCCCAGCAGCAGCAGCAGTCACTGCGCCTCCCCTCTGAGCGCTGGCGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480372.1 ENST00000498309.1 |
||
| CDS CCA 90 bp | CCCATTGTGGCGGCGGCCCTGCAGGACCGAGGGTGGACAGGCGCTTaGCTCGCTTTCGCGAAGCGCCGCAGTCCCCGCGGGGGTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PIVAAALQDRGWTGA*LAFAKRRSPRGGPS Trigger: GGATGGACCCCCGCGGGGACTGCGGCGCTTCGCGAAAGCGAGCCAAGCGCCTGTCCACCCTCGGTCCTGCAGGGCCGCCGCCACAATGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378665.1 |
||
| CDS GCA 90 bp | GGAATATTCAATGAGAAAGGTGTGTACGGCAAGTTACAGAGCGCCTaGCCGGCCGCCAGCGCTCAGAGGGGAGGCGCAGTGACTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GIFNEKGVYGKLQSA*PAASAQRGGAVTAA Trigger: AGCAGCAGTCACTGCGCCTCCCCTCTGAGCGCTGGCGGCCGGGCAGGCGCTCTGTAACTTGCCGTACACACCTTTCTCATTGAATATTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480372.1 ENST00000498309.1 |
||
| CDS TCA 90 bp | GATTCCTTTAGTGAAGACGTGCGGATAGGCGCGCTGCTCGAACGGTaGCAAGCTGTAGCTGATCACATGCCGCATCCGCGTCAGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DSFSEDVRIGALLER*QAVADHMPHPRQIP Trigger: GGGAATCTGACGCGGATGCGGCATGTGATCAGCTACAGCTTGTCACCGTTCGAGCAGCGCGCCTATCCGCACGTCTTCACTAAAGGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000378665.1 ENST00000378667.1 ENST00000378670.8 ENST00000480372.1 ENST00000498309.1 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGGCTTTAGACAGGAGAATCGTTaGAACCCAGGAGGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RASLSNRSPGQQAAQDGFRQENR*NPGGTD Trigger: ATCTGTGCCTCCTGGGTTCAAACGATTCTCCTGTCT...AAAGCCATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGAGCAAGCTTGTCCAACCGCAGTCCTGGGCAGCAAGCAGCCCAGGATGTGGTTGAAAACATTGTaGGCCTCCTGGCACAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AVEQACPTAVLGSKQPRMWLKTL*ASWHRN Trigger: GTTTCTGTGCCAGGAGGCCAACAATGTTTTCAACCA...CATCCTGGGCTGCTTGCTGCCCAGGACTGCGGTTGGACAAGCTTGCTCTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGCACAGAAACAGAAAACTGCTGTGGAGGCTAAGAGATCACCTCATCCGCAGCCCAGGATGGCTTaGAATCCGACCCAACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLAQKQKTAVEAKRSPHPQPRMA*NPTQQK Trigger: TTTTTGTTGGGTCGGATTCAAAGCCATCCTGGGCTG...CGGATGAGGTGATCTCTTAGCCTCCACAGCAGTTTTCTGTTTCTGTGCCAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTCGCCATAGCCCATGTCACCCACAAATGGTTAGATGCAGGAGTACCTGCATATGGTTGAAAACATaGTTGGCCTCCTGGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: STRHSPCHPQMVRCRSTCIWLKT*LASWHR Trigger: TCTGTGCCAGGAGGCCAACAATGTTTTCAACCATAT...GCAGGTACTCCTGCATCTAACCATTTGTGGGTGACATGGGCTATGGCGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGAGGGGCGCTTCATGAACTTGAATATTAGTGGTCACACAGGATTCTACGGGCGCTTCATGAACTaGAATATTAGTGGTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: AEEGRFMNLNISGHTGFYGRFMN*NISGHT Trigger: TGTGTGACCACTAATATTCAAGTTCATGAAGCGCCC...GTAGAATCCTGTGTGACCACTAATATTCAAGTTCATGAAGCGCCCCTCCTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378670.8 |
||
| CDS GCA 72 bp | GGCCGCCAGCGCTCAGAGGGGAGGCGCAGTGACTGCTaGTGCTGCTGGGGTCCAGCCTCCCGCTCCCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRQRSEGRRSDC*CCWGPASRSRG Trigger: CCCGCGGGAGCGGGAGGCTGGACCCCAGCAGCAGCAGCAGTCACTGCGCCTCCCCTCTGAGCGCTGGCGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000480372.1 ENST00000498309.1 |
||
| CDS CCA 72 bp | GCGGCGGCCCTGCAGGACCGAGGGTGGACAGGCGCTTaGCTCGCTTTCGCGAAGCGCCGCAGTCCCCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAALQDRGWTGA*LAFAKRRSPRG Trigger: CCCGCGGGGACTGCGGCGCTTCGCGAAAGCGAGCCAAGCGCCTGTCCACCCTCGGTCCTGCAGGGCCGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378665.1 |
||
| CDS CAA 72 bp | GGCGGCGGCCCTGCAGGACCGAGGGTGGACAGGCGCTaGGCTCGCTTTCGCGAAGCGCCGCAGTCCCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GGGPAGPRVDRR*ARFREAPQSPR Trigger: CCGCGGGGACTGCGGCGCTTCGCGAAAGCGAGCCAAGCGCCTGTCCACCCTCGGTCCTGCAGGGCCGCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378665.1 |
||
| CDS CCA 72 bp | CGGCCCATTGTGGCGGCGGCCCTGCAGGACCGAGGGTaGACAGGCGCTTGGCTCGCTTTCGCGAAGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPIVAAALQDRG*TGAWLAFAKRR Trigger: GCGGCGCTTCGCGAAAGCGAGCCAAGCGCCTGTCCACCCTCGGTCCTGCAGGGCCGCCGCCACAATGGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378665.1 |
||
| CDS CAA 90 bp | GCCCATTGTGGCGGCGGCCCTGCAGGACCGAGGGTGGACAGGCGCTaGGCTCGCTTTCGCGAAGCGCCGCAGTCCCCGCGGGGGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: AHCGGGPAGPRVDRR*ARFREAPQSPRGSI Trigger: GATGGACCCCCGCGGGGACTGCGGCGCTTCGCGAAAGCGAGCCAAGCGCCTGTCCACCCTCGGTCCTGCAGGGCCGCCGCCACAATGGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378665.1 |
||
| CDS GCA 72 bp | AATGAGAAAGGTGTGTACGGCAAGTTACAGAGCGCCTaGCCGGCCGCCAGCGCTCAGAGGGGAGGCGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: NEKGVYGKLQSA*PAASAQRGGAV Trigger: CACTGCGCCTCCCCTCTGAGCGCTGGCGGCCGGGCAGGCGCTCTGTAACTTGCCGTACACACCTTTCTCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480372.1 ENST00000498309.1 |
||
| CDS TCA 72 bp | AGTGAAGACGTGCGGATAGGCGCGCTGCTCGAACGGTaGCAAGCTGTAGCTGATCACATGCCGCATCCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SEDVRIGALLER*QAVADHMPHPR Trigger: ACGCGGATGCGGCATGTGATCAGCTACAGCTTGTCACCGTTCGAGCAGCGCGCCTATCCGCACGTCTTCACT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000378665.1 ENST00000378667.1 ENST00000378670.8 ENST00000480372.1 ENST00000498309.1 |
||
| CDS CAA 72 bp | ACCTCAGAGGAACATGCTGGAATCACCCGAGTGACCTaGGGCCAGTCATTTCAGTTCTGTAGCTCAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSEEHAGITRVT*GQSFQFCSSVF Trigger: GAAAACTGAGCTACAGAACTGAAATGACTGGCCCAAGGTCACTCGGGTGATTCCAGCATGTTCCTCTGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480372.1 ENST00000498309.1 |
||