Pregenerated sensors for UQCRH (Homo sapiens)
Ensembl gene IDs: ENSG00000173660Ensembl transcript IDs: ENST00000460947.1, ENST00000486951.1, ENST00000496387.5
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGCCTCTGAATTACCGTGCAGAAGGCCAGCTGGCAGAGCCACACTaGCGCCAGAAATGGCAGAATGCGGTCTCCCATTCAATTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: LPLNYRAEGQLAEPH*RQKWQNAVSHSILM Trigger: CATCAGAATTGAATGGGAGACCGCATTCTGCCATTTCTGGCGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGTAATTCAGAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460947.1 |
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| CDS CCA 90 bp | TACCGTGCAGAAGGCCAGCTGGCAGAGCCACACTGCCGCCAGAAATaGCAGAATGCGGTCTCCCATTCAATTCTGATGCTAAGTAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: YRAEGQLAEPHCRQK*QNAVSHSILMLSSR Trigger: CCTACTACTTAGCATCAGAATTGAATGGGAGACCGCATTCTGCCATTTCTGGCGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460947.1 |
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| CDS CCA 90 bp | ATCCGTGCAGAAGGCCAGCTGGCAGAGCCACACTGCCGCCAGAAATaGCAGAATGCGGTCTCCCATTCAATTCTGATGCTAAGTAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: IRAEGQLAEPHCRQK*QNAVSHSILMLSSR Trigger: CCTACTACTTAGCATCAGAATTGAATGGGAGACCGCATTCTGCCATTTCTGGCGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496387.5 |
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| CDS TCA 90 bp | ACATATGCTTTGATTAACACAACCACCAAACCAAGGTGCTGCCTCTaGATTACCGTGCAGAAGGCCAGCTGGCAGAGCCACACTGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: TYALINTTTKPRCCL*ITVQKASWQSHTAA Trigger: GGCGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGTAATTCAGAGGCAGCACCTTGGTTTGGTGGTTGTGTTAATCAAAGCATATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460947.1 |
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| CDS TCA 90 bp | ATGCCTAGCCCAAAGTTCTTTATTAAACCACAAATAGCAGATGATTaGGTGCCAGGCCCTCAAGATGCCATCTGCTCCCTGGTACCACAA | + |
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Preference number: 5 (lower is better) Translates to: MPSPKFFIKPQIADD*VPGPQDAICSLVPQ Trigger: TTGTGGTACCAGGGAGCAGATGGCATCTTGAGGGCCTGGCACTCAATCATCTGCTATTTGTGGTTTAATAAAGAACTTTGGGCTAGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486951.1 |
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| CDS GCA 90 bp | ATGCTAAGTAGTAGGGAAAAGTTTCACATTCCTGCCTTCCAAGGTTaGCAGTATGCACTGAAAGCCTCAGTCCTATCACTAATTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: MLSSREKFHIPAFQG*QYALKASVLSLIPP Trigger: AGGAGGAATTAGTGATAGGACTGAGGCTTTCAGTGCATACTGGCAACCTTGGAAGGCAGGAATGTGAAACTTTTCCCTACTACTTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496387.5 |
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| CDS TCA 90 bp | ACAAAATGGGCATTTTTAGCAGAGACCCACCAAACACATATGCTTTaGTTAACACAACCACCAAACCAAGGTGCTGCCTCTGAATTACCG | + |
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Preference number: 5 (lower is better) Translates to: TKWAFLAETHQTHML*LTQPPNQGAASELP Trigger: CGGTAATTCAGAGGCAGCACCTTGGTTTGGTGGTTGTGTTAATCAAAGCATATGTGTTTGGTGGGTCTCTGCTAAAAATGCCCATTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460947.1 |
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| CDS GCA 72 bp | GGGATCCGTGCAGAAGGCCAGCTGGCAGAGCCACACTaGCGCCAGAAATGGCAGAATGCGGTCTCCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: GIRAEGQLAEPH*RQKWQNAVSHS Trigger: TGAATGGGAGACCGCATTCTGCCATTTCTGGCGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496387.5 |
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| CDS CCA 72 bp | CTCACTGTTGTTAGGGGATCCGTGCAGAAGGCCAGCTaGCAGAGCCACACTGCCGCCAGAAATGGCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: LTVVRGSVQKAS*QSHTAARNGRM Trigger: CATTCTGCCATTTCTGGCGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGATCCCCTAACAACAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496387.5 |
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| CDS GCA 72 bp | AATTACCGTGCAGAAGGCCAGCTGGCAGAGCCACACTaGCGCCAGAAATGGCAGAATGCGGTCTCCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: NYRAEGQLAEPH*RQKWQNAVSHS Trigger: TGAATGGGAGACCGCATTCTGCCATTTCTGGCGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGTAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460947.1 |
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| CDS CCA 72 bp | GAAGGCCAGCTGGCAGAGCCACACTGCCGCCAGAAATaGCAGAATGCGGTCTCCCATTCAATTCTGATGCTA | + |
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Preference number: 6 (lower is better) Translates to: EGQLAEPHCRQK*QNAVSHSILML Trigger: TAGCATCAGAATTGAATGGGAGACCGCATTCTGCCATTTCTGGCGGCAGTGTGGCTCTGCCAGCTGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460947.1 ENST00000496387.5 |
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| CDS TCA 72 bp | TTGATTAACACAACCACCAAACCAAGGTGCTGCCTCTaGATTACCGTGCAGAAGGCCAGCTGGCAGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LINTTTKPRCCL*ITVQKASWQSH Trigger: GTGGCTCTGCCAGCTGGCCTTCTGCACGGTAATTCAGAGGCAGCACCTTGGTTTGGTGGTTGTGTTAATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460947.1 |
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| CDS TCA 72 bp | CCAAAGTTCTTTATTAAACCACAAATAGCAGATGATTaGGTGCCAGGCCCTCAAGATGCCATCTGCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PKFFIKPQIADD*VPGPQDAICSL Trigger: CAGGGAGCAGATGGCATCTTGAGGGCCTGGCACTCAATCATCTGCTATTTGTGGTTTAATAAAGAACTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486951.1 |
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| CDS GCA 72 bp | AAAGTTTCACATTCCTGCCTTCCAAGGTTGCCAGTATaGACTGAAAGCCTCAGTCCTATCACTAATTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KVSHSCLPRLPV*TESLSPITNSS Trigger: GGAGGAATTAGTGATAGGACTGAGGCTTTCAGTGCATACTGGCAACCTTGGAAGGCAGGAATGTGAAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496387.5 |
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| CDS GCA 72 bp | AGTAGGGAAAAGTTTCACATTCCTGCCTTCCAAGGTTaGCAGTATGCACTGAAAGCCTCAGTCCTATCACTA | + |
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Preference number: 6 (lower is better) Translates to: SREKFHIPAFQG*QYALKASVLSL Trigger: TAGTGATAGGACTGAGGCTTTCAGTGCATACTGGCAACCTTGGAAGGCAGGAATGTGAAACTTTTCCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496387.5 |
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| CDS CAA 72 bp | GGCATTTTTAGCAGAGACCCACCAAACACATATGCTTaGATTAACACAACCACCAAACCAAGGTGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GIFSRDPPNTYA*INTTTKPRCCL Trigger: GAGGCAGCACCTTGGTTTGGTGGTTGTGTTAATCAAAGCATATGTGTTTGGTGGGTCTCTGCTAAAAATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460947.1 |
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