RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UPRT (Homo sapiens)

Ensembl gene IDs: ENSG00000094841

Ensembl transcript IDs: ENST00000373373.8, ENST00000373379.5, ENST00000373383.9, ENST00000462237.5, ENST00000526850.5, ENST00000530743.1, ENST00000531704.5, ENST00000652605.1

Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGTGTCTCCTCATCACTCTGAATCAGGATCTTTCCAATTCGTATaGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGC +
Preference number: 1 (lower is better)
Translates to: FVSPHHSESGSFQFV*IDSSLVNLVPLPHR
Trigger: GCGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCCTGATTCAGAGTGATGAGGAGACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
3UTR CAA 90 bp CTTTCCCCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATaGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGA +
Preference number: 2 (lower is better)
Translates to: LSPTLQKNHQFLPRG*MALTVLGSPLSASR
Trigger: TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGGGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTATCTCTGGAAACTCCTaGATGATTGATTTGGCACCC +
Preference number: 2 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLISGNS*MIDLAP
Trigger: GGGTGCCAAATCAATCATTCAGGAGTTTCCAGAGAT...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373379.5
3UTR-3UTR CCA 90 bp TTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAAAATACTTGTACCCTGTTaGAGTGGTCACCATGCATTC +
Preference number: 2 (lower is better)
Translates to: FHCLTASHYADPTISLLKILVPC*SGHHAF
Trigger: GAATGCATGGTGACCACTCCAACAGGGTACAAGTAT...TTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
3UTR-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTTCTGCCACCCTCAAGTaGATCAGTAAAACAAATAGA +
Preference number: 2 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLSATLK*ISKTNR
Trigger: TCTATTTGTTTTACTGATTCACTTGAGGGTGGCAGA...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCTCTGCCACCCTCAAGTaGATCAGTAAAACAAATAGA +
Preference number: 2 (lower is better)
Translates to: LPRGLMALTVLGSPLSASSATLK*ISKTNR
Trigger: TCTATTTGTTTTACTGATTCACTTGAGGGTGGCAGA...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAAAACTCCTGAATGATTaGTTTGGCACCCACCTCAGG +
Preference number: 2 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTKLLND*FGTHLR
Trigger: CCTGAGGTGGGTGCCAAATCAATCATTCAGGAGTTT...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373379.5
3UTR-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACACTGGAAACTCCTGAATaGTTGATTTGGCACCCACCT +
Preference number: 2 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTLETPE*LIWHPP
Trigger: AGGTGGGTGCCAAATCAATCATTCAGGAGTTTCCAG...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373379.5
3UTR-3UTR GCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGGCACCTACCAACAATaGAGTTTGGGAAATGAGCCA +
Preference number: 2 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTGTYQQ*SLGNEP
Trigger: TGGCTCATTTCCCAAACTGCATTGTTGGTAGGTGCC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR GCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATCCAAAATGTGTAGGTaGAACAGGATGAACTTCAGT +
Preference number: 2 (lower is better)
Translates to: PRGLMALTVLGSPLSASRSKMCR*NRMNFS
Trigger: ACTGAAGTTCATCCTGTTGCACCTACACATTTTGGA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373379.5
3UTR-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGAACTGACTCTCATTTaGGTTTTATTTGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLELTLI*VLFVAS
Trigger: TGAAGCCACAAATAAAACTCAAATGAGAGTCAGTTC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGTGGGACAAAGAACTaGCTCTCATTTGAGTTTTAT +
Preference number: 2 (lower is better)
Translates to: LPRGLMALTVLGSPLSASSGTKN*LSFEFY
Trigger: ATAAAACTCAAATGAGAGTCAGTTCTTTGTCCCACT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAAGTGGGACAAAGAACTaGCTCTCATTTGAGTTTTAT +
Preference number: 2 (lower is better)
Translates to: PRGLMALTVLGSPLSASRSGTKN*LSFEFY
Trigger: ATAAAACTCAAATGAGAGTCAGTTCTTTGTCCCACT...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAAAAACATAATGGCCTaGGAGTTAACCATACATCCT +
Preference number: 2 (lower is better)
Translates to: LPRGLMALTVLGSPLSASKNIMA*ELTIHP
Trigger: AGGATGTATGGTTAACTCTCAGGCCATTATGTTTTT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTAAAAACATAATGGCCTaGGAGTTAACCATACATCCT +
Preference number: 2 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLKNIMA*ELTIHP
Trigger: AGGATGTATGGTTAACTCTCAGGCCATTATGTTTTT...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGTAGGTGCAACAGGATaGACTTCAGTAGTTAAAATT +
Preference number: 2 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLVGATG*TSVVKI
Trigger: AATTTTAACTACTGAAGTTCATCCTGTTGCACCTAC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373379.5
3UTR-3UTR TCA 90 bp CGCAGAAAACATGAAGTCACCTCTACTGGCTGTCTTGTATCAATGAAGCTGCATAGGGATGTTTTAATATaGACCAGACTCCAGATCTTC +
Preference number: 2 (lower is better)
Translates to: RRKHEVTSTGCLVSMKLHRDVLI*TRLQIF
Trigger: GAAGATCTGGAGTCTGGTTCATATTAAAACATCCCT...ATGCAGCTTCATTGATACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
3UTR-3UTR GCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGGCACCTACCAACAATaGAGTTTGGGAAATGAGCCA +
Preference number: 2 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVGTYQQ*SLGNEP
Trigger: TGGCTCATTTCCCAAACTGCATTGTTGGTAGGTGCC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR CCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCTTTGAGTTTTATTTGTaGCTTCAAGCAACCTCCAAA +
Preference number: 2 (lower is better)
Translates to: LPRGLMALTVLGSPLSASFEFYL*LQATSK
Trigger: TTTGGAGGTTGCTTGAAGCCACAAATAAAACTCAAA...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR CCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTTTTGAGTTTTATTTGTaGCTTCAAGCAACCTCCAAA +
Preference number: 2 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLFEFYL*LQATSK
Trigger: TTTGGAGGTTGCTTGAAGCCACAAATAAAACTCAAA...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATCTGCCACCCTCAAGTaGATCAGTAAAACAAATAGA +
Preference number: 2 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTSATLK*ISKTNR
Trigger: TCTATTTGTTTTACTGATTCACTTGAGGGTGGCAGA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR GCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGGGCACCTACCAACAATaGAGTTTGGGAAATGAGCCA +
Preference number: 2 (lower is better)
Translates to: ALILSKTFPSALFCAFEQGTYQQ*SLGNEP
Trigger: TGGCTCATTTCCCAAACTGCATTGTTGGTAGGTGCC...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
3UTR-3UTR CCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGCACAACAGCTTCCTATaGGGCCATGGGAGTATAATT +
Preference number: 2 (lower is better)
Translates to: ALILSKTFPSALFCAFEQHNSFL*GHGSII
Trigger: AATTATACTCCCATGGCCCCATAGGAAGCTGTTGTG...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
3UTR-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTATCTGCCACCCTCAAGTaGATCAGTAAAACAAATAGA +
Preference number: 2 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVSATLK*ISKTNR
Trigger: TCTATTTGTTTTACTGATTCACTTGAGGGTGGCAGA...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR CCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATTTGAGTTTTATTTGTaGCTTCAAGCAACCTCCAAA +
Preference number: 2 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTFEFYL*LQATSK
Trigger: TTTGGAGGTTGCTTGAAGCCACAAATAAAACTCAAA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAAGTGGGACAAAGAACTaGCTCTCATTTGAGTTTTAT +
Preference number: 2 (lower is better)
Translates to: TVEECGNSHICETLVELKSGTKN*LSFEFY
Trigger: ATAAAACTCAAATGAGAGTCAGTTCTTTGTCCCACT...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR GCA 90 bp ACTGGGTTGAACTCCATGTTCTATAAGAACCTTTACAGCTTCAATTACAGTATTTCCAAAATGTGTAGGTaGAACAGGATGAACTTCAGT +
Preference number: 2 (lower is better)
Translates to: TGLNSMFYKNLYSFNYSISKMCR*NRMNFS
Trigger: ACTGAAGTTCATCCTGTTGCACCTACACATTTTGGA...AATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
3UTR-3UTR CAA 90 bp TTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCCATACTTGTACCCTGTaGGAGTGGTCACCATGCATT +
Preference number: 3 (lower is better)
Translates to: LFHCLTASHYADPTISLLHTCTL*EWSPCI
Trigger: AATGCATGGTGACCACTCCAACAGGGTACAAGTATG...GAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
3UTR-3UTR CAA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCGCATATACTTCATTGTaGAATTCGGTGCCAACAGTA +
Preference number: 3 (lower is better)
Translates to: LPRGLMALTVLGSPLSASAYTSL*NSVPTV
Trigger: TACTGTTGGCACCGAATTCAACAATGAAGTATATGC...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR CAA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAGCATATACTTCATTGTaGAATTCGGTGCCAACAGTA +
Preference number: 3 (lower is better)
Translates to: PRGLMALTVLGSPLSASRAYTSL*NSVPTV
Trigger: TACTGTTGGCACCGAATTCAACAATGAAGTATATGC...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR CAA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGCATATACTTCATTGTaGAATTCGGTGCCAACAGTA +
Preference number: 3 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLAYTSL*NSVPTV
Trigger: TACTGTTGGCACCGAATTCAACAATGAAGTATATGC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR CAA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGTTGCATATACTTCATaGTTGAATTCGGTGCCAACA +
Preference number: 3 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLVAYTS*LNSVPT
Trigger: TGTTGGCACCGAATTCAACAATGAAGTATATGCAAC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR CCA 72 bp CCTCATCACTCTGAATCAGGATCTTTCCAATTCGTATaGATCGACAGCAGTCTCGTAAACCTTGTTCCATTG +
Preference number: 3 (lower is better)
Translates to: PHHSESGSFQFV*IDSSLVNLVPL
Trigger: CAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCCTGATTCAGAGTGATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
3UTR-3UTR CAA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTAGAACTGACTCTCATTaGAGTTTTATTTGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLRTDSH*SFICGF
Trigger: GAAGCCACAAATAAAACTCAAATGAGAGTCAGTTCT...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR TCA 72 bp GTGGAGAACAGACTGAGTAGGATGATAACACTGGGTTaGACTCCATGTTCTATAAGAACCTTTACAGCTTCA +
Preference number: 3 (lower is better)
Translates to: VENRLSRMITLG*TPCSIRTFTAS
Trigger: TGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGTTATCATCCTACTCAGTCTGTTCTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
3UTR CCA 72 bp TGGATACATCAGAAGGACTTTTCTCCGGTAAATGTCTaGGGGGAATTTGGCATAATATACTTTGGCTCTTTG +
Preference number: 3 (lower is better)
Translates to: WIHQKDFSPVNV*GEFGIIYFGSL
Trigger: CAAAGAGCCAAAGTATATTATGCCAAATTCCCCCCAGACATTTACCGGAGAAAAGTCCTTCTGATGTATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462237.5
3UTR-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGCATATACTTCATTGTaGAATTCGGTGCCAACAGTA +
Preference number: 3 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTAYTSL*NSVPTV
Trigger: TACTGTTGGCACCGAATTCAACAATGAAGTATATGC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAAGAACTGACTCTCATTaGAGTTTTATTTGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTRTDSH*SFICGF
Trigger: GAAGCCACAAATAAAACTCAAATGAGAGTCAGTTCT...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR TCA 72 bp TGCAAACTACAGTGGGACAAAGAACTGACTCTCATTTaGGTTTTATTTGTGGCTTCAAGCAACCTCCAAACT +
Preference number: 3 (lower is better)
Translates to: CKLQWDKELTLI*VLFVASSNLQT
Trigger: AGTTTGGAGGTTGCTTGAAGCCACAAATAAAACTCAAATGAGAGTCAGTTCTTTGTCCCACTGTAGTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR TCA 72 bp ACTTCAGTAGTTAAAATTGTGATCTCTGGAAACTCCTaGATGATTGATTTGGCACCCACCTCAGGACTATAT +
Preference number: 3 (lower is better)
Translates to: TSVVKIVISGNS*MIDLAPTSGLY
Trigger: ATATAGTCCTGAGGTGGGTGCCAAATCAATCATTCAGGAGTTTCCAGAGATCACAATTTTAACTACTGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373379.5
3UTR-3UTR CAA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAAGAACTGACTCTCATTaGAGTTTTATTTGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: TVEECGNSHICETLVELKRTDSH*SFICGF
Trigger: GAAGCCACAAATAAAACTCAAATGAGAGTCAGTTCT...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
3UTR TCA 72 bp AAGTATTTCTGTCCAAAATGTGTAGGTGCAACAGGATaGACTTCAGTAGTTAAAATTGTGATCTCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: KYFCPKCVGATG*TSVVKIVISGN
Trigger: GTTTCCAGAGATCACAATTTTAACTACTGAAGTTCATCCTGTTGCACCTACACATTTTGGACAGAAATACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000462237.5
CDS-3UTR GCA 90 bp CCTTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCGGCAGCAGCTTAAGCTaGGCCCCGATCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PCSIASPLLIMLTPQFPFGSSLS*APICRE
Trigger: CTCCCGGCAGATCGGGGCGCAGCTTAAGCTGCTGCC...GAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp TTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCTGTTGCCCTCTGAGTTaGGGCTGGAGCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LFHCLTASHYADPTISLLCCPLS*GWSRRR
Trigger: CCTGCGGCGGCTCCAGCCTCAACTCAGAGGGCAACA...GAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGCTGCGCCCCGATCTaGCGGGAGAGTTCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASSCAPI*RESSQS
Trigger: GGACTGCGAACTCTCCCGGCAGATCGGGGCGCAGCT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAAGCTGCGCCCCGATCTaGCGGGAGAGTTCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRSCAPI*RESSQS
Trigger: GGACTGCGAACTCTCCCGGCAGATCGGGGCGCAGCT...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp TTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAGCTGCGCCCCGATCTaGCGGGAGAGTTCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LFHCLTASHYADPTISLLSCAPI*RESSQS
Trigger: GGACTGCGAACTCTCCCGGCAGATCGGGGCGCAGCT...GAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCGGCAGCAGCTTAAGCTaGGCCCCGATCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASGSSLS*APICRE
Trigger: CTCCCGGCAGATCGGGGCGCAGCTTAAGCTGCTGCC...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCACCACTGTTGCCCTCTaGGTTGAGGCTGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASTTVAL*VEAGAA
Trigger: GGCGGCTCCAGCCTCAACTCAGAGGGCAACAGTGGT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGACACTGTAACTCCGTaGCCATACACCGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLDTVTP*PYTGPR
Trigger: CCGGGGCCCGGTGTATGGCCACGGAGTTACAGTGTC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAGCCGGCAGGCTAGAATaGGCGTACCCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRAGRLE*AYPVRR
Trigger: TCTCCTCACGGGGTACGCCCATTCTAGCCTGCCGGC...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGCCGGCAGGCTAGAATaGGCGTACCCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLAGRLE*AYPVRR
Trigger: TCTCCTCACGGGGTACGCCCATTCTAGCCTGCCGGC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTAATGGGCGTACCCCGTaGGGAGAATCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLNGRTP*GESPWP
Trigger: GGGCCAAGGTGATTCTCCTCACGGGGTACGCCCATT...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp CGCAGAAAACATGAAGTCACCTCTACTGGCTGTCTTGTATCAATGAAGCTGCATAGCTGCGCCCCGATCTaGCGGGAGAGTTCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RRKHEVTSTGCLVSMKLHSCAPI*RESSQS
Trigger: GGACTGCGAACTCTCCCGGCAGATCGGGGCGCAGCT...ATGCAGCTTCATTGATACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CCA 90 bp TTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAAAGACACTGTAACTCCGTaGCCATACACCGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FHCLTASHYADPTISLLKDTVTP*PYTGPR
Trigger: CCGGGGCCCGGTGTATGGCCACGGAGTTACAGTGTC...TTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CCA 90 bp TTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAAAGCCGGCAGGCTAGAATaGGCGTACCCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FHCLTASHYADPTISLLKAGRLE*AYPVRR
Trigger: TCTCCTCACGGGGTACGCCCATTCTAGCCTGCCGGC...TTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp TCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAAATAATGGGCGTACCCCGTaGGGAGAATCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SIASPLLIMLTPQFPFSNNGRTP*GESPWP
Trigger: GGGCCAAGGTGATTCTCCTCACGGGGTACGCCCATT...ATTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp ATCAGGATCTTTCCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCACCACTGTTGCCCTCTaGGTTGAGGCTGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: IRIFPIRMDRQQSRKPCSTTVAL*VEAGAA
Trigger: GGCGGCTCCAGCCTCAACTCAGAGGGCAACAGTGGT...GGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAACGTGCTCTCTCGGTTaGTCCCGCCTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRTCSLG*SRLLRT
Trigger: TGTTCTGAGGAGGCGGGAGCAACCGAGAGAGCACGT...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAGGCTCTGTTTCCCCCTaGGTGGTCCAGGATCAGATC +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRGSVSP*VVQDQI
Trigger: GATCTGATCCTGGACCACGCAGGGGGAAACAGAGCC...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp CCTTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCCCTCTAGGAAGGAGTTaGCAGCTGGTGCGTCATAGC +
Preference number: 4 (lower is better)
Translates to: PCSIASPLLIMLTPQFPFPLGRS*QLVRHS
Trigger: GCTATGACGCACCAGCTGGCAACTCCTTCCTAGAGG...GAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACTGTTTCCCCCTGCGTaGTCCAGGATCAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRLFPPA*SRIRSP
Trigger: TGGCGATCTGATCCTGGACCACGCAGGGGGAAACAG...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTCTGTTTCCCCCTGCGTaGTCCAGGATCAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLLFPPA*SRIRSP
Trigger: TGGCGATCTGATCCTGGACCACGCAGGGGGAAACAG...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTCTCGGGACTTGGGGTTaGGGCAGAGTTTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLLGTWG*GRVYLL
Trigger: CAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAG...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACTCGGGACTTGGGGTTaGGGCAGAGTTTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRLGTWG*GRVYLL
Trigger: CAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAG...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp CGCAGAAAACATGAAGTCACCTCTACTGGCTGTCTTGTATCAATGAAGCTGCATGGACAGATGCTCACGTaGTCTCTCGGTTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RRKHEVTSTGCLVSMKLHGQMLT*SLGCSR
Trigger: GCGGGAGCAACCGAGAGAGCACGTGAGCATCTGTCC...ATGCAGCTTCATTGATACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR GCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATCGCCAGGTCGCAGCTaGTCGGGACTTGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTSPGRS*SGLGVE
Trigger: CTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp TTGTGTCTCCTCATCACTCTGAATCAGGATCTTTCCAATTCGTATGGATCGACATCGCCAGGTCGCAGCTaGTCGGGACTTGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LCLLITLNQDLSNSYGSTSPGRS*SGLGVE
Trigger: CTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGA...TGTCGATCCATACGAATTGGAAAGATCCTGATTCAGAGTGATGAGGAGACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp TTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCGGAGTTGCCAGCTGGTaGGTCATAGCTGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: LFHCLTASHYADPTISLLGVASW*VIAATV
Trigger: GACAGTAGCAGCTATGACGCACCAGCTGGCAACTCC...GAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTCCTCTAGGAAGGAGTTaGCAGCTGGTGCGTCATAGC +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLPLGRS*QLVRHS
Trigger: GCTATGACGCACCAGCTGGCAACTCCTTCCTAGAGG...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp TCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGGGCAGCAGCTTAAGCTaGGCCCCGATCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SLRLYFRHNARLNYLLTGGSSLS*APICRE
Trigger: CTCCCGGCAGATCGGGGCGCAGCTTAAGCTGCTGCC...CCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGACACTGTAACTCCGTaGCCATACACCGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTDTVTP*PYTGPR
Trigger: CCGGGGCCCGGTGTATGGCCACGGAGTTACAGTGTC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTATGTTGCCCTCTGAGTTaGGGCTGGAGCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVCCPLS*GWSRRR
Trigger: CCTGCGGCGGCTCCAGCCTCAACTCAGAGGGCAACA...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAATGTTGCCCTCTGAGTTaGGGCTGGAGCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKCCPLS*GWSRRR
Trigger: CCTGCGGCGGCTCCAGCCTCAACTCAGAGGGCAACA...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp CTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGATGACCACTGTTGCCCTCTaGGTTGAGGCTGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LRLYFRHNARLNYLLTGMTTVAL*VEAGAA
Trigger: GGCGGCTCCAGCCTCAACTCAGAGGGCAACAGTGGT...CATCCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCCTGTCTTGTCACGGATaGTGGTCTGTAGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASLSCHG*WSVAPV
Trigger: TACGGGAGCTACAGACCATCATCCGTGACAAGACAG...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp CGCAGAAAACATGAAGTCACCTCTACTGGCTGTCTTGTATCAATGAAGCTGCATACGTGCTCTCTCGGTTaGTCCCGCCTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: RRKHEVTSTGCLVSMKLHTCSLG*SRLLRT
Trigger: TGTTCTGAGGAGGCGGGAGCAACCGAGAGAGCACGT...ATGCAGCTTCATTGATACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR GCA 90 bp AGCTGCATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTCGCCAGGTCGCAGCTaGTCGGGACTTGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SCMYSLRLYFRHNARLNYSPGRS*SGLGVE
Trigger: CTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGA...ATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACATGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR GCA 90 bp TCCAGTGCTGAGAATTGGATACATCAGAAGGACTTTTCTCCGGTAAATGTCTGGGGCTCTGTTTCCCCCTaGGTGGTCCAGGATCAGATC +
Preference number: 4 (lower is better)
Translates to: SSAENWIHQKDFSPVNVWGSVSP*VVQDQI
Trigger: GATCTGATCCTGGACCACGCAGGGGGAAACAGAGCC...CCAGACATTTACCGGAGAAAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CCA 90 bp CTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGATGGACACTGTAACTCCGTaGCCATACACCGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LRLYFRHNARLNYLLTGMDTVTP*PYTGPR
Trigger: CCGGGGCCCGGTGTATGGCCACGGAGTTACAGTGTC...CATCCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp TCCAGTGCTGAGAATTGGATACATCAGAAGGACTTTTCTCCGGTAAATGTCTGGCTCGGGACTTGGGGTTaGGGCAGAGTTTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSAENWIHQKDFSPVNVWLGTWG*GRVYLL
Trigger: CAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAG...CCAGACATTTACCGGAGAAAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp TCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGAATGGGCGTACCCCGTaGGGAGAATCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLRLYFRHNARLNYLLTGNGRTP*GESPWP
Trigger: GGGCCAAGGTGATTCTCCTCACGGGGTACGCCCATT...CCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTTGTAGCTCCCGTATCTaGTCATTCATAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLCSSRI*SFIGSS
Trigger: GCTGCTGCCTATGAATGATCAGATACGGGAGCTACA...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATGTAGCTCCCGTATCTaGTCATTCATAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRCSSRI*SFIGSS
Trigger: GCTGCTGCCTATGAATGATCAGATACGGGAGCTACA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAGATCCGCAGAAAACATaGAGTCACCTCTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRDPQKT*SHLYWL
Trigger: CAGCCAGTAGAGGTGACTTCATGTTTTCTGCGGATC...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAATGCTGAACTCACCATaGGGAGTGGAGAACAGACTG +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRMLNSP*GVENRL
Trigger: CAGTCTGTTCTCCACTCCTCATGGTGAGTTCAGCAT...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373379.5
CDS-3UTR GCA 90 bp TTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCGGTAGAAAGGACAGATaGTCACGTGCTCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: LFHCLTASHYADPTISLLGRKDR*SRALSV
Trigger: AACCGAGAGAGCACGTGAGCATCTGTCCTTTCTACC...GAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp CGCAGAAAACATGAAGTCACCTCTACTGGCTGTCTTGTATCAATGAAGCTGCATCCTCTAGGAAGGAGTTaGCAGCTGGTGCGTCATAGC +
Preference number: 4 (lower is better)
Translates to: RRKHEVTSTGCLVSMKLHPLGRS*QLVRHS
Trigger: GCTATGACGCACCAGCTGGCAACTCCTTCCTAGAGG...ATGCAGCTTCATTGATACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR GCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATGGAGCCCTAGTTACTaGCTCATGCTGAACTCACCA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRWSPSY*LMLNSP
Trigger: TGGTGAGTTCAGCATGAGGCAGTAACTAGGGCTCCA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373379.5
CDS-3UTR TCA 90 bp CCTTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTATCCCCGCTGCTACTaGACACTAAAGATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PCSIASPLLIMLTPQFPFYPRCY*TLKIKR
Trigger: CCTCTTTATCTTTAGTGTTCAGTAGCAGCGGGGATA...GAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAAATGGGCGTACCCCGTaGGGAGAATCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKNGRTP*GESPWP
Trigger: GGGCCAAGGTGATTCTCCTCACGGGGTACGCCCATT...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp TATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACATGTTGCCCTCTGAGTTaGGGCTGGAGCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: YSLRLYFRHNARLNYLLTCCPLS*GWSRRR
Trigger: CCTGCGGCGGCTCCAGCCTCAACTCAGAGGGCAACA...TGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp TTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAAATGTAGCTCCCGTATCTaGTCATTCATAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FHCLTASHYADPTISLLKCSSRI*SFIGSS
Trigger: GCTGCTGCCTATGAATGATCAGATACGGGAGCTACA...TTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCCGCTTCTCATTATGCTaGCCCCACAATTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASRFSLC*PHNFPS
Trigger: AGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCG...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTATTGATTTGGCACCATaGGGAGTGGAGAACAGACTG +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLIDLAP*GVENRL
Trigger: CAGTCTGTTCTCCACTCCTCATGGTGCCAAATCAAT...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR GCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGTCGCCAGGTCGCAGCTaGTCGGGACTTGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQSPGRS*SGLGVE
Trigger: CTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGA...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373383.9
CDS-3UTR GCA 90 bp TCCAGTGCTGAGAATTGGATACATCAGAAGGACTTTTCTCCGGTAAATGTCTGGCTGGTGCGTCATAGCTaGTACTGTCACCACTACCAC +
Preference number: 4 (lower is better)
Translates to: SSAENWIHQKDFSPVNVWLVRHS*YCHHYH
Trigger: GTGGTAGTGGTGACAGTAGCAGCTATGACGCACCAG...CCAGACATTTACCGGAGAAAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGGCACCTACCAACAATaGAGTTTGGGAAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLGTYQQ*SLGNEP
Trigger: TGGCTCATTTCCCAAACTGCATTGTTGGTAGGTGCC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR GCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCGGCTGTCCTATTTCCTaGTGTATAGACGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASGCPIS*CIDGLQ
Trigger: CTGAAGTCCGTCTATACAGCAGGAAATAGGACAGCC...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR CCA 90 bp ATCAGGATCTTTCCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCGAAGGAGTTGCCAGCTaGTGCGTCATAGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: IRIFPIRMDRQQSRKPCSEGVAS*CVIAAT
Trigger: AGTAGCAGCTATGACGCACCAGCTGGCAACTCCTTC...GGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAGGCATTAACAGTACTTaGCTCTCCCTTGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRGINST*LSLVSI
Trigger: GATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCC...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATTAGTCCCAGCTACTTaGGAGGCTGAAGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTLVPAT*EAEAGG
Trigger: TCCTCCCGCTTCAGCCTCCCAAGTAGCTGGGACTAA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATATCCCCGCTGCTACTaGACACTAAAGATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRYPRCY*TLKIKR
Trigger: CCTCTTTATCTTTAGTGTTCAGTAGCAGCGGGGATA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp CTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGATGCTCGGGACTTGGGGTTaGGGCAGAGTTTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRLYFRHNARLNYLLTGMLGTWG*GRVYLL
Trigger: CAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAG...CATCCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp CGCAGAAAACATGAAGTCACCTCTACTGGCTGTCTTGTATCAATGAAGCTGCATTGTAGCTCCCGTATCTaGTCATTCATAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRKHEVTSTGCLVSMKLHCSSRI*SFIGSS
Trigger: GCTGCTGCCTATGAATGATCAGATACGGGAGCTACA...ATGCAGCTTCATTGATACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp GTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGCTTCTCAGTCTCCTCATCACTCTaGATCAGGATCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: VWIDSSLVNLVPLPHRFSVSSSL*IRIFPI
Trigger: AATTGGAAAGATCCTGATTCAGAGTGATGAGGAGAC...TGAGAAGCGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACTGGAAACTCCTGAATaGTTGATTTGGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRLETPE*LIWHHE
Trigger: CTCATGGTGCCAAATCAATCATTCAGGAGTTTCCAG...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR GCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAACGTGCTCTCTCGGTTaGTCCCGCCTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKTCSLG*SRLLRT
Trigger: TGTTCTGAGGAGGCGGGAGCAACCGAGAGAGCACGT...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGGCTCTGTTTCCCCCTaGGTGGTCCAGGATCAGATC +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVGSVSP*VVQDQI
Trigger: GATCTGATCCTGGACCACGCAGGGGGAAACAGAGCC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACACTGGTGCGTCATAGCTaGTACTGTCACCACTACCAC +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTLVRHS*YCHHYH
Trigger: GTGGTAGTGGTGACAGTAGCAGCTATGACGCACCAG...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTAAGAGGCTGTGCGAATaGATCCGAATCTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLKRLCE*IRIFKQ
Trigger: CTGTTTGAAGATTCGGATGCATTCGCACAGCCTCTT...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR CCA 90 bp TATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGCCGGCAGGCTAGAATaGGCGTACCCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: YSLRLYFRHNARLNYLLTAGRLE*AYPVRR
Trigger: TCTCCTCACGGGGTACGCCCATTCTAGCCTGCCGGC...TGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGAAGGAGTTGCCAGCTaGTGCGTCATAGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTEGVAS*CVIAAT
Trigger: AGTAGCAGCTATGACGCACCAGCTGGCAACTCCTTC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCATACTTGTACCCTGTTaGAGTGGTCACCATGCATTC +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASILVPC*SGHHAF
Trigger: GAATGCATGGTGACCACTCCAACAGGGTACAAGTAT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp CCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGTCTTTCCAATTCGTATaGATCGACAGCAGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: PIRMDRQQSRKPCSIASPSFQFV*IDSSLV
Trigger: TACGAGACTGCTGTCGATCCATACGAATTGGAAAGA...CGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAGCTGCATGTATTCTCTaGGGCTCTATTTTAGACACA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRAACIL*GSILDT
Trigger: TGTGTCTAAAATAGAGCCTCAGAGAATACATGCAGC...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR TCA 90 bp TACAGTATTTCCAGTGCTGAGAATTGGATACATCAGAAGGACTTTTCTCCGGTACTGTCTTGTCACGGATaGTGGTCTGTAGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: YSISSAENWIHQKDFSPVLSCHG*WSVAPV
Trigger: TACGGGAGCTACAGACCATCATCCGTGACAAGACAG...TACCGGAGAAAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGAAATACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATCTTTATATGGCAGCTaGTTCAATCCCTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRSLYGS*FNPSST
Trigger: TGTGGAAGAGGGATTGAATCAGCTGCCATATAAAGA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCGTCTCCTCATCACTCTaGATCAGGATCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASVSSSL*IRIFPI
Trigger: AATTGGAAAGATCCTGATTCAGAGTGATGAGGAGAC...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp GTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGCTTCTCACAGTATTTCCAGTGCTaGGAATTGGATACATCAGAA +
Preference number: 4 (lower is better)
Translates to: VWIDSSLVNLVPLPHRFSQYFQC*ELDTSE
Trigger: TTCTGATGTATCCAATTCTCAGCACTGGAAATACTG...TGAGAAGCGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp ATCAGGATCTTTCCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGATTTGGCACCATaGGGAGTGGAGAACAGACTG +
Preference number: 4 (lower is better)
Translates to: IRIFPIRMDRQQSRKPCSIDLAP*GVENRL
Trigger: CAGTCTGTTCTCCACTCCTCATGGTGCCAAATCAAT...GGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAAACTCCTGAATGATTaGTTTGGCACCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASKLLND*FGTMRS
Trigger: ACTCCTCATGGTGCCAAATCAATCATTCAGGAGTTT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTAAACTCCTGAATGATTaGTTTGGCACCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLKLLND*FGTMRS
Trigger: ACTCCTCATGGTGCCAAATCAATCATTCAGGAGTTT...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCATCTCTGGAAACTCCTaGATGATTGATTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASISGNS*MIDLAP
Trigger: TGGTGCCAAATCAATCATTCAGGAGTTTCCAGAGAT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCACAGTCCAGGATATGTaGATGTTGCCTATAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASTVQDM*MLPIKG
Trigger: CCCTTTTATAGGCAACATTCACATATCCTGGACTGT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR GCA 90 bp TCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGCTGGTGCGTCATAGCTaGTACTGTCACCACTACCAC +
Preference number: 4 (lower is better)
Translates to: SLRLYFRHNARLNYLLTGLVRHS*YCHHYH
Trigger: GTGGTAGTGGTGACAGTAGCAGCTATGACGCACCAG...CCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR GCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGGAGTTGCCAGCTGGTaGGTCATAGCTGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVGVASW*VIAATV
Trigger: GACAGTAGCAGCTATGACGCACCAGCTGGCAACTCC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCTTGGAGTGGTCACCATaGATTCTTTATATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASLEWSP*ILYMAA
Trigger: AGCTGCCATATAAAGAATGCATGGTGACCACTCCAA...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp AGAAAACATGAAGTCACCTCTACTGGCTGTCTTGTATCAATGAAGCTGCATGTAGGTTGTGACAGGGCATaGAGTCCGGACACTGTAACT +
Preference number: 4 (lower is better)
Translates to: RKHEVTSTGCLVSMKLHVGCDRA*SPDTVT
Trigger: AGTTACAGTGTCCGGACTCCATGCCCTGTCACAACC...TACATGCAGCTTCATTGATACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CCA 90 bp CTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGATGGAAGGAGTTGCCAGCTaGTGCGTCATAGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: LRLYFRHNARLNYLLTGMEGVAS*CVIAAT
Trigger: AGTAGCAGCTATGACGCACCAGCTGGCAACTCCTTC...CATCCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATGTACCCTGTTGGAGTaGTCACCATGCATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRCTLLE*SPCILY
Trigger: ATAAAGAATGCATGGTGACCACTCCAACAGGGTACA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTTGTACCCTGTTGGAGTaGTCACCATGCATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLCTLLE*SPCILY
Trigger: ATAAAGAATGCATGGTGACCACTCCAACAGGGTACA...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTTCTTTCCAATTCGTATaGATCGACAGCAGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLSFQFV*IDSSLV
Trigger: TACGAGACTGCTGTCGATCCATACGAATTGGAAAGA...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATCTCCGGTAAATGTCTaGGGGGAATTTGGCATAATA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRSPVNV*GEFGII
Trigger: TATTATGCCAAATTCCCCCCAGACATTTACCGGAGA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp CCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGTCCAGTGCTGAGAATTaGATACATCAGAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: PIRMDRQQSRKPCSIASPSSAEN*IHQKDF
Trigger: AAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGA...CGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp CGCAGAAAACATGAAGTCACCTCTACTGGCTGTCTTGTATCAATGAAGCTGCATTATCCCCGCTGCTACTaGACACTAAAGATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RRKHEVTSTGCLVSMKLHYPRCY*TLKIKR
Trigger: CCTCTTTATCTTTAGTGTTCAGTAGCAGCGGGGATA...ATGCAGCTTCATTGATACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp CTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGATGGATCCGCAGAAAACATaGAGTCACCTCTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRLYFRHNARLNYLLTGMDPQKT*SHLYWL
Trigger: CAGCCAGTAGAGGTGACTTCATGTTTTCTGCGGATC...CATCCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp TACAGTATTTCCAGTGCTGAGAATTGGATACATCAGAAGGACTTTTCTCCGGTAGATCCGCAGAAAACATaGAGTCACCTCTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: YSISSAENWIHQKDFSPVDPQKT*SHLYWL
Trigger: CAGCCAGTAGAGGTGACTTCATGTTTTCTGCGGATC...TACCGGAGAAAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGAAATACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTACTGTCTTGTCACGGATaGTGGTCTGTAGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVLSCHG*WSVAPV
Trigger: TACGGGAGCTACAGACCATCATCCGTGACAAGACAG...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACACGCTTCTCATTATGCTaGCCCCACAATTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTRFSLC*PHNFPS
Trigger: AGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCG...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACAGTATTTCCAGTGCTaGGAATTGGATACATCAGAA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRQYFQC*ELDTSE
Trigger: TTCTGATGTATCCAATTCTCAGCACTGGAAATACTG...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTCAGTATTTCCAGTGCTaGGAATTGGATACATCAGAA +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLQYFQC*ELDTSE
Trigger: TTCTGATGTATCCAATTCTCAGCACTGGAAATACTG...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGTTACTGCCTCATGCTaGACTCACCATGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVVTASC*THHEEW
Trigger: CCACTCCTCATGGTGAGTTCAGCATGAGGCAGTAAC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373379.5
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATCTGCCACCCTCAAGTaGATCAGTAAAACAAATAGA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRSATLK*ISKTNR
Trigger: TCTATTTGTTTTACTGATTCACTTGAGGGTGGCAGA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATCTTTTCTGTGCTTTTaGACAGAGGCCCACAACAGC +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTSFLCF*TEAHNS
Trigger: GCTGTTGTGGGCCTCTGTTCAAAAGCACAGAAAAGA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR GCA 90 bp ACTGGGTTGAACTCCATGTTCTATAAGAACCTTTACAGCTTCAATTACAGTATTACGTGCTCTCTCGGTTaGTCCCGCCTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: TGLNSMFYKNLYSFNYSITCSLG*SRLLRT
Trigger: TGTTCTGAGGAGGCGGGAGCAACCGAGAGAGCACGT...AATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp AGCTGCATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATGGTAGAAAGGACAGATaGTCACGTGCTCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SCMYSLRLYFRHNARLNYGRKDR*SRALSV
Trigger: AACCGAGAGAGCACGTGAGCATCTGTCCTTTCTACC...ATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACATGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR GCA 90 bp ATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAGGCTCTGTTTCCCCCTaGGTGGTCCAGGATCAGATC +
Preference number: 4 (lower is better)
Translates to: MYSLRLYFRHNARLNYLLGSVSP*VVQDQI
Trigger: GATCTGATCCTGGACCACGCAGGGGGAAACAGAGCC...TAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR GCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGGGAGTTGCCAGCTGGTaGGTCATAGCTGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQGVASW*VIAATV
Trigger: GACAGTAGCAGCTATGACGCACCAGCTGGCAACTCC...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373383.9
CDS-3UTR GCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCTCCAAAATGTGTAGGTaGAACAGGATGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASSKMCR*NRMNFS
Trigger: ACTGAAGTTCATCCTGTTGCACCTACACATTTTGGA...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR GCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTTCCAAAATGTGTAGGTaGAACAGGATGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLSKMCR*NRMNFS
Trigger: ACTGAAGTTCATCCTGTTGCACCTACACATTTTGGA...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp ATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTACTGTTTCCCCCTGCGTaGTCCAGGATCAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: MYSLRLYFRHNARLNYLLLFPPA*SRIRSP
Trigger: TGGCGATCTGATCCTGGACCACGCAGGGGGAAACAG...TAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CCA 90 bp ACTGGGTTGAACTCCATGTTCTATAAGAACCTTTACAGCTTCAATTACAGTATTCTGTTTCCCCCTGCGTaGTCCAGGATCAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: TGLNSMFYKNLYSFNYSILFPPA*SRIRSP
Trigger: TGGCGATCTGATCCTGGACCACGCAGGGGGAAACAG...AATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CCA 90 bp TCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAAATTCTCCGGTAAATGTCTaGGGGGAATTTGGCATAATA +
Preference number: 4 (lower is better)
Translates to: SIASPLLIMLTPQFPFSNSPVNV*GEFGII
Trigger: TATTATGCCAAATTCCCCCCAGACATTTACCGGAGA...ATTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCTCCAGTGCTGAGAATTaGATACATCAGAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASSSAEN*IHQKDF
Trigger: AAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGA...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTTCCAGTGCTGAGAATTaGATACATCAGAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLSSAEN*IHQKDF
Trigger: AAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGA...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGGCATTAACAGTACTTaGCTCTCCCTTGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTGINST*LSLVSI
Trigger: GATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCATCCTGTATTTCATCTaGCAACTCCAGGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASILYFI*QLQEKR
Trigger: TCTCTTTTCCTGGAGTTGCCAGATGAAATACAGGAT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR TCA 90 bp CTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGATGAAAAGTTGTCACGGATaGTGGTCTGTAGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: LRLYFRHNARLNYLLTGMKSCHG*WSVAPV
Trigger: TACGGGAGCTACAGACCATCATCCGTGACAACTTTT...CATCCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp TCCAGTGCTGAGAATTGGATACATCAGAAGGACTTTTCTCCGGTAAATGTCTGGTCTTTATATGGCAGCTaGTTCAATCCCTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SSAENWIHQKDFSPVNVWSLYGS*FNPSST
Trigger: TGTGGAAGAGGGATTGAATCAGCTGCCATATAAAGA...CCAGACATTTACCGGAGAAAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAATGATAACACTGGGTTaGACTCCATGTTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRMITLG*TPCSIR
Trigger: TCTTATAGAACATGGAGTTCAACCCAGTGTTATCAT...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTATGATAACACTGGGTTaGACTCCATGTTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLMITLG*TPCSIR
Trigger: TCTTATAGAACATGGAGTTCAACCCAGTGTTATCAT...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAGTAGGTGCAACAGGATaGACTTCAGTAGTTAAAATT +
Preference number: 4 (lower is better)
Translates to: PRGLMALTVLGSPLSASRVGATG*TSVVKI
Trigger: AATTTTAACTACTGAAGTTCATCCTGTTGCACCTAC...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCGAACTGACTCTCATTTaGGTTTTATTTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPRGLMALTVLGSPLSASELTLI*VLFVAS
Trigger: TGAAGCCACAAATAAAACTCAAATGAGAGTCAGTTC...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ATCAGGATCTTTCCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATCTCTGGAAACTCCTaGATGATTGATTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: IRIFPIRMDRQQSRKPCSISGNS*MIDLAP
Trigger: TGGTGCCAAATCAATCATTCAGGAGTTTCCAGAGAT...GGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGGTAGAAAGGACAGATaGTCACGTGCTCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVGRKDR*SRALSV
Trigger: AACCGAGAGAGCACGTGAGCATCTGTCCTTTCTACC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAGGTAGAAAGGACAGATaGTCACGTGCTCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKGRKDR*SRALSV
Trigger: AACCGAGAGAGCACGTGAGCATCTGTCCTTTCTACC...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR GCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGCTGGTGCGTCATAGCTaGTACTGTCACCACTACCAC +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQLVRHS*YCHHYH
Trigger: GTGGTAGTGGTGACAGTAGCAGCTATGACGCACCAG...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373383.9
CDS-3UTR GCA 90 bp TATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGAGTTGCCAGCTGGTaGGTCATAGCTGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: YSLRLYFRHNARLNYLLTGVASW*VIAATV
Trigger: GACAGTAGCAGCTATGACGCACCAGCTGGCAACTCC...TGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGGAAGGAGTTGCCAGCTaGTGCGTCATAGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQEGVAS*CVIAAT
Trigger: AGTAGCAGCTATGACGCACCAGCTGGCAACTCCTTC...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373383.9
CDS-3UTR CCA 90 bp TTGTGTCTCCTCATCACTCTGAATCAGGATCTTTCCAATTCGTATGGATCGACAATACTTGTACCCTGTTaGAGTGGTCACCATGCATTC +
Preference number: 4 (lower is better)
Translates to: LCLLITLNQDLSNSYGSTILVPC*SGHHAF
Trigger: GAATGCATGGTGACCACTCCAACAGGGTACAAGTAT...TGTCGATCCATACGAATTGGAAAGATCCTGATTCAGAGTGATGAGGAGACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTACACCTCAGGACTATATaGAGCCCTAGTTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVHLRTI*SPSYCL
Trigger: GAGGCAGTAACTAGGGCTCCATATAGTCCTGAGGTG...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373379.5
CDS-3UTR CCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTACCCCTAGGCCGCTGTTaGTTTCCTTTAGCACACTTT +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVPLGRC*FPLAHF
Trigger: AAAGTGTGCTAAAGGAAACCAACAGCGGCCTAGGGG...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373383.9
CDS-3UTR CCA 90 bp CCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGTTGTCTATGCTCTTTTaGAATAAATCCTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PIRMDRQQSRKPCSIASPLSMLF*NKSSGK
Trigger: TTTGCCTGAGGATTTATTCCAAAAGAGCATAGACAA...CGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp TATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACATTTACTTGCTGGTTGTaGCAGGGCATGGAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: YSLRLYFRHNARLNYLLTFTCWL*QGMESG
Trigger: TCCGGACTCCATGCCCTGTCACAACCAGCAAGTAAA...TGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATCTTTATATGGCAGCTaGTTCAATCCCTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTSLYGS*FNPSST
Trigger: TGTGGAAGAGGGATTGAATCAGCTGCCATATAAAGA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTCTCCTCATCACTCTaGATCAGGATCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTVSSSL*IRIFPI
Trigger: AATTGGAAAGATCCTGATTCAGAGTGATGAGGAGAC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTACTGGAAACTCCTGAATaGTTGATTTGGCACCCACCT +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVLETPE*LIWHPP
Trigger: AGGTGGGTGCCAAATCAATCATTCAGGAGTTTCCAG...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373379.5
CDS-3UTR TCA 90 bp TCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAAATGTAGGTGCAACAGGATaGACTTCAGTAGTTAAAATT +
Preference number: 4 (lower is better)
Translates to: SIASPLLIMLTPQFPFSNVGATG*TSVVKI
Trigger: AATTTTAACTACTGAAGTTCATCCTGTTGCACCTAC...ATTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAATTGATTTGGCACCATaGGGAGTGGAGAACAGACTG +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVIDLAP*GVENRL
Trigger: CAGTCTGTTCTCCACTCCTCATGGTGCCAAATCAAT...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp TTGTGTCTCCTCATCACTCTGAATCAGGATCTTTCCAATTCGTATGGATCGACAAAACTCCTGAATGATTaGTTTGGCACCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LCLLITLNQDLSNSYGSTKLLND*FGTMRS
Trigger: ACTCCTCATGGTGCCAAATCAATCATTCAGGAGTTT...TGTCGATCCATACGAATTGGAAAGATCCTGATTCAGAGTGATGAGGAGACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp TACAGTATTTCCAGTGCTGAGAATTGGATACATCAGAAGGACTTTTCTCCGGTACTGGAAACTCCTGAATaGTTGATTTGGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: YSISSAENWIHQKDFSPVLETPE*LIWHHE
Trigger: CTCATGGTGCCAAATCAATCATTCAGGAGTTTCCAG...TACCGGAGAAAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGAAATACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATTGGAGTGGTCACCATaGATTCTTTATATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTLEWSP*ILYMAA
Trigger: AGCTGCCATATAAAGAATGCATGGTGACCACTCCAA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR GCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAGGCACCTACCAACAATaGAGTTTGGGAAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKGTYQQ*SLGNEP
Trigger: TGGCTCATTTCCCAAACTGCATTGTTGGTAGGTGCC...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp TTGTGTCTCCTCATCACTCTGAATCAGGATCTTTCCAATTCGTATGGATCGACATGTACCCTGTTGGAGTaGTCACCATGCATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LCLLITLNQDLSNSYGSTCTLLE*SPCILY
Trigger: ATAAAGAATGCATGGTGACCACTCCAACAGGGTACA...TGTCGATCCATACGAATTGGAAAGATCCTGATTCAGAGTGATGAGGAGACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATGTACCCTGTTGGAGTaGTCACCATGCATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTCTLLE*SPCILY
Trigger: ATAAAGAATGCATGGTGACCACTCCAACAGGGTACA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATCTTTCCAATTCGTATaGATCGACAGCAGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTSFQFV*IDSSLV
Trigger: TACGAGACTGCTGTCGATCCATACGAATTGGAAAGA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAGGCATTAACAGTACTTaGCTCTCCCTTGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKGINST*LSLVSI
Trigger: GATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCC...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGGCATTAACAGTACTTaGCTCTCCCTTGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVGINST*LSLVSI
Trigger: GATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTATATCCCCGCTGCTACTaGACACTAAAGATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVYPRCY*TLKIKR
Trigger: CCTCTTTATCTTTAGTGTTCAGTAGCAGCGGGGATA...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR TCA 90 bp AGCTGCATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATGCTGTCTTGTATCAATaGAGCTGCATGTATTCTCTG +
Preference number: 4 (lower is better)
Translates to: SCMYSLRLYFRHNARLNYAVLYQ*SCMYSL
Trigger: CAGAGAATACATGCAGCTTCATTGATACAAGACAGC...ATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACATGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGCGCTTCTCATTATGCTaGCCCCACAATTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQRFSLC*PHNFPS
Trigger: AGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCG...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACACAGTATTTCCAGTGCTaGGAATTGGATACATCAGAA +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTQYFQC*ELDTSE
Trigger: TTCTGATGTATCCAATTCTCAGCACTGGAAATACTG...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAATCTCTGGAAACTCCTaGATGATTGATTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKISGNS*MIDLAP
Trigger: GGGTGCCAAATCAATCATTCAGGAGTTTCCAGAGAT...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373379.5
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGATTGATTTGGCACCATaGGGAGTGGAGAACAGACTG +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQIDLAP*GVENRL
Trigger: CAGTCTGTTCTCCACTCCTCATGGTGCCAAATCAAT...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAACTGGAAACTCCTGAATaGTTGATTTGGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKLETPE*LIWHHE
Trigger: CTCATGGTGCCAAATCAATCATTCAGGAGTTTCCAG...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGTCTTTTCTGTGCTTTTaGACAGAGGCCCACAACAGC +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQSFLCF*TEAHNS
Trigger: GCTGTTGTGGGCCTCTGTTCAAAAGCACAGAAAAGA...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR GCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATCCAAAATGTGTAGGTaGAACAGGATGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTSKMCR*NRMNFS
Trigger: ACTGAAGTTCATCCTGTTGCACCTACACATTTTGGA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAATACTTGTACCCTGTTaGAGTGGTCACCATGCATTC +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVILVPC*SGHHAF
Trigger: GAATGCATGGTGACCACTCCAACAGGGTACAAGTAT...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAACACAACAGCTTCCTATaGGGCCATGGGAGTATAATT +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKHNSFL*GHGSII
Trigger: AATTATACTCCCATGGCCCCATAGGAAGCTGTTGTG...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp ACTGGGTTGAACTCCATGTTCTATAAGAACCTTTACAGCTTCAATTACAGTATTCGCTTCTCATTATGCTaGCCCCACAATTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TGLNSMFYKNLYSFNYSIRFSLC*PHNFPS
Trigger: AGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCG...AATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAGTCTCCTCATCACTCTaGATCAGGATCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKVSSSL*IRIFPI
Trigger: AATTGGAAAGATCCTGATTCAGAGTGATGAGGAGAC...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGAACTGACTCTCATTTaGGTTTTATTTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTELTLI*VLFVAS
Trigger: TGAAGCCACAAATAAAACTCAAATGAGAGTCAGTTC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGCTGGAAACTCCTGAATaGTTGATTTGGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQLETPE*LIWHHE
Trigger: CTCATGGTGCCAAATCAATCATTCAGGAGTTTCCAG...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAATCTCTGGAAACTCCTaGATGATTGATTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVISGNS*MIDLAP
Trigger: TGGTGCCAAATCAATCATTCAGGAGTTTCCAGAGAT...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR GCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAATTGGAGTGGTCACCATaGATTCTTTATATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKLEWSP*ILYMAA
Trigger: AGCTGCCATATAAAGAATGCATGGTGACCACTCCAA...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR GCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTATTGGAGTGGTCACCATaGATTCTTTATATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVLEWSP*ILYMAA
Trigger: AGCTGCCATATAAAGAATGCATGGTGACCACTCCAA...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAATGTACCCTGTTGGAGTaGTCACCATGCATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKCTLLE*SPCILY
Trigger: ATAAAGAATGCATGGTGACCACTCCAACAGGGTACA...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGATACTTGTACCCTGTTaGAGTGGTCACCATGCATTC +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQILVPC*SGHHAF
Trigger: GAATGCATGGTGACCACTCCAACAGGGTACAAGTAT...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR CCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAATCTCCGGTAAATGTCTaGGGGGAATTTGGCATAATA +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKSPVNV*GEFGII
Trigger: TATTATGCCAAATTCCCCCCAGACATTTACCGGAGA...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAAGGGATGTTTTAATATaGACCAGACTCCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKRDVLI*TRLQIF
Trigger: GAAGATCTGGAGTCTGGTTCATATTAAAACATCCCT...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGGTCTCCTCATCACTCTaGATCAGGATCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQVSSSL*IRIFPI
Trigger: AATTGGAAAGATCCTGATTCAGAGTGATGAGGAGAC...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAATCTGCCACCCTCAAGTaGATCAGTAAAACAAATAGA +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKSATLK*ISKTNR
Trigger: TCTATTTGTTTTACTGATTCACTTGAGGGTGGCAGA...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGTCTTTCCAATTCGTATaGATCGACAGCAGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQSFQFV*IDSSLV
Trigger: TACGAGACTGCTGTCGATCCATACGAATTGGAAAGA...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp ATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAGCTGCATGTATTCTCTaGGGCTCTATTTTAGACACA +
Preference number: 4 (lower is better)
Translates to: MYSLRLYFRHNARLNYLLAACIL*GSILDT
Trigger: TGTGTCTAAAATAGAGCCTCAGAGAATACATGCAGC...TAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAGTAGGTGCAACAGGATaGACTTCAGTAGTTAAAATT +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKVGATG*TSVVKI
Trigger: AATTTTAACTACTGAAGTTCATCCTGTTGCACCTAC...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGAACTGACTCTCATTTaGGTTTTATTTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVELTLI*VLFVAS
Trigger: TGAAGCCACAAATAAAACTCAAATGAGAGTCAGTTC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAAGTGGGACAAAGAACTaGCTCTCATTTGAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVSGTKN*LSFEFY
Trigger: ATAAAACTCAAATGAGAGTCAGTTCTTTGTCCCACT...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR TCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAAAAAACATAATGGCCTaGGAGTTAACCATACATCCT +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVKNIMA*ELTIHP
Trigger: AGGATGTATGGTTAACTCTCAGGCCATTATGTTTTT...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR GCA 90 bp ACTGGGTTGAACTCCATGTTCTATAAGAACCTTTACAGCTTCAATTACAGTATTTTGGAGTGGTCACCATaGATTCTTTATATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TGLNSMFYKNLYSFNYSILEWSP*ILYMAA
Trigger: AGCTGCCATATAAAGAATGCATGGTGACCACTCCAA...AATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR GCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGTCCAAAATGTGTAGGTaGAACAGGATGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQSKMCR*NRMNFS
Trigger: ACTGAAGTTCATCCTGTTGCACCTACACATTTTGGA...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR CCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGTCCAGTGCTGAGAATTaGATACATCAGAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQSSAEN*IHQKDF
Trigger: AAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGA...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp ATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAAGGGATGTTTTAATATaGACCAGACTCCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: MYSLRLYFRHNARLNYLLRDVLI*TRLQIF
Trigger: GAAGATCTGGAGTCTGGTTCATATTAAAACATCCCT...TAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGATGATAACACTGGGTTaGACTCCATGTTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQMITLG*TPCSIR
Trigger: TCTTATAGAACATGGAGTTCAACCCAGTGTTATCAT...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGGAACTGACTCTCATTTaGGTTTTATTTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQELTLI*VLFVAS
Trigger: TGAAGCCACAAATAAAACTCAAATGAGAGTCAGTTC...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGAGTGGGACAAAGAACTaGCTCTCATTTGAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQSGTKN*LSFEFY
Trigger: ATAAAACTCAAATGAGAGTCAGTTCTTTGTCCCACT...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR TCA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGAAAAACATAATGGCCTaGGAGTTAACCATACATCCT +
Preference number: 4 (lower is better)
Translates to: ALILSKTFPSALFCAFEQKNIMA*ELTIHP
Trigger: AGGATGTATGGTTAACTCTCAGGCCATTATGTTTTT...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR CCA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAATTTGAGTTTTATTTGTaGCTTCAAGCAACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TVEECGNSHICETLVELKFEFYL*LQATSK
Trigger: TTTGGAGGTTGCTTGAAGCCACAAATAAAACTCAAA...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTATTTGAGTTTTATTTGTaGCTTCAAGCAACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVFEFYL*LQATSK
Trigger: TTTGGAGGTTGCTTGAAGCCACAAATAAAACTCAAA...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CCA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTATTGTCTATGCTCTTTTaGAATAAATCCTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVLSMLF*NKSSGK
Trigger: TTTGCCTGAGGATTTATTCCAAAAGAGCATAGACAA...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR TCA 90 bp ACTGGGTTGAACTCCATGTTCTATAAGAACCTTTACAGCTTCAATTACAGTATTATGATAACACTGGGTTaGACTCCATGTTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: TGLNSMFYKNLYSFNYSIMITLG*TPCSIR
Trigger: TCTTATAGAACATGGAGTTCAACCCAGTGTTATCAT...AATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS CCA 90 bp GAGCCGCCGCAGGCCCCAGAGTCCAGCTCGGCCGGCAGGCTAGAATaGGCGTACCCCGTGAGGAGAATCACCTTGGCCCTGGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: EPPQAPESSSAGRLE*AYPVRRITLALEAL
Trigger: CAGAGCCTCCAGGGCCAAGGTGATTCTCCTCACGGGGTACGCCCATTCTAGCCTGCCGGCCGAGCTGGACTCTGGGGCCTGCGGCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS GCA 90 bp CCCCGTGAGGAGAATCACCTTGGCCCTGGAGGCTCTGTTTCCCCCTaGGTGGTCCAGGATCAGATCGCCAGGTCGCAGCTGCTCGGGACT +
Preference number: 5 (lower is better)
Translates to: PREENHLGPGGSVSP*VVQDQIARSQLLGT
Trigger: AGTCCCGAGCAGCTGCGACCTGGCGATCTGATCCTGGACCACGCAGGGGGAAACAGAGCCTCCAGGGCCAAGGTGATTCTCCTCACGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CCA 90 bp GTGAGGAGAATCACCTTGGCCCTGGAGGCTCTGTTTCCCCCTGCGTaGTCCAGGATCAGATCGCCAGGTCGCAGCTGCTCGGGACTTGGG +
Preference number: 5 (lower is better)
Translates to: VRRITLALEALFPPA*SRIRSPGRSCSGLG
Trigger: CCCAAGTCCCGAGCAGCTGCGACCTGGCGATCTGATCCTGGACCACGCAGGGGGAAACAGAGCCTCCAGGGCCAAGGTGATTCTCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CCA 90 bp CTTGCTGGTTGTGACAGGGCATGGAGTCCGGACACTGTAACTCCGTaGCCATACACCGGGCCCCGGGCTATCCCCGCTGCTACTGAACAC +
Preference number: 5 (lower is better)
Translates to: LAGCDRAWSPDTVTP*PYTGPRAIPAATEH
Trigger: GTGTTCAGTAGCAGCGGGGATAGCCCGGGGCCCGGTGTATGGCCACGGAGTTACAGTGTCCGGACTCCATGCCCTGTCACAACCAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS TCA 90 bp GTCCAGGATCAGATCGCCAGGTCGCAGCTGCTCGGGACTTGGGGTTaGGGCAGAGTTTACTTGCTGGTTGTGACAGGGCATGGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: VQDQIARSQLLGTWG*GRVYLLVVTGHGVR
Trigger: CCGGACTCCATGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGATCTGATCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS GCA 90 bp GCGCCCCGATCTGCCGGGAGAGTTCGCAGTCCTCTAGGAAGGAGTTaGCAGCTGGTGCGTCATAGCTGCTACTGTCACCACTACCACTGT +
Preference number: 5 (lower is better)
Translates to: APRSAGRVRSPLGRS*QLVRHSCYCHHYHC
Trigger: ACAGTGGTAGTGGTGACAGTAGCAGCTATGACGCACCAGCTGGCAACTCCTTCCTAGAGGACTGCGAACTCTCCCGGCAGATCGGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CCA 90 bp GACTTGGGGTTGAGGCAGAGTTTACTTGCTGGTTGTGACAGGGCATaGAGTCCGGACACTGTAACTCCGTGGCCATACACCGGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: DLGLRQSLLAGCDRA*SPDTVTPWPYTGPR
Trigger: CCGGGGCCCGGTGTATGGCCACGGAGTTACAGTGTCCGGACTCCATGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAACCCCAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS TCA 90 bp CTACTGGCTGTCTTGTCACGGATGATGGTCTGTAGCTCCCGTATCTaGTCATTCATAGGCAGCAGCTTAAGCTGCGCCCCGATCTGCCGG +
Preference number: 5 (lower is better)
Translates to: LLAVLSRMMVCSSRI*SFIGSSLSCAPICR
Trigger: CCGGCAGATCGGGGCGCAGCTTAAGCTGCTGCCTATGAATGATCAGATACGGGAGCTACAGACCATCATCCGTGACAAGACAGCCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS-3UTR CAA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCCTGTTGCCCTCTGAGTaGAGGCTGGAGCCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LPRGLMALTVLGSPLSASLLPSE*RLEPPQ
Trigger: CTGCGGCGGCTCCAGCCTCAACTCAGAGGGCAACAG...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAAGCGGGAGGATCCCTaGTCCAGGAGCTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LPRGLMALTVLGSPLSASKREDP*SRSLRL
Trigger: CAGCCTCAAGCTCCTGGACAAGGGATCCTCCCGCTT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR CAA 90 bp GTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGCTTCTCAGTGAGGAGAATCACCTaGGCCCTGGAGGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: VWIDSSLVNLVPLPHRFSVRRIT*ALEALF
Trigger: AAACAGAGCCTCCAGGGCCAAGGTGATTCTCCTCAC...TGAGAAGCGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp TTGTGTCTCCTCATCACTCTGAATCAGGATCTTTCCAATTCGTATGGATCGACACACGTGCTCTCTCGGTaGCTCCCGCCTCCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: LCLLITLNQDLSNSYGSTHVLSR*LPPPQN
Trigger: GTTCTGAGGAGGCGGGAGCAACCGAGAGAGCACGTG...TGTCGATCCATACGAATTGGAAAGATCCTGATTCAGAGTGATGAGGAGACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGCTCGGGACTTGGGGTaGAGGCAGAGTTTACTTGCT +
Preference number: 5 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLARDLG*RQSLLA
Trigger: AGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAGC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp TCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGGGCTGTTGCCCTCTGAGTaGAGGCTGGAGCCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: SLRLYFRHNARLNYLLTGLLPSE*RLEPPQ
Trigger: CTGCGGCGGCTCCAGCCTCAACTCAGAGGGCAACAG...CCCTGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CAA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACCTCTACTGGCTGTCTaGTCACGGATGATGGTCTGT +
Preference number: 5 (lower is better)
Translates to: PRGLMALTVLGSPLSASRPLLAV*SRMMVC
Trigger: ACAGACCATCATCCGTGACAAGACAGCCAGTAGAGG...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCACCCCTAGGCCGCTGTaGGTTTCCTTTAGCACACTT +
Preference number: 5 (lower is better)
Translates to: LPRGLMALTVLGSPLSASTPRPL*VSFSTL
Trigger: AAGTGTGCTAAAGGAAACCAACAGCGGCCTAGGGGT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373383.9
CDS-3UTR CAA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTACACGTGCTCTCTCGGTaGCTCCCGCCTCCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVHVLSR*LPPPQN
Trigger: GTTCTGAGGAGGCGGGAGCAACCGAGAGAGCACGTG...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTGAGGAGAATCACCTaGGCCCTGGAGGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTVRRIT*ALEALF
Trigger: AAACAGAGCCTCCAGGGCCAAGGTGATTCTCCTCAC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp ACTGGGTTGAACTCCATGTTCTATAAGAACCTTTACAGCTTCAATTACAGTATTCTGTTGCCCTCTGAGTaGAGGCTGGAGCCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: TGLNSMFYKNLYSFNYSILLPSE*RLEPPQ
Trigger: CTGCGGCGGCTCCAGCCTCAACTCAGAGGGCAACAG...AATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATCACCACTACCACTGTaGCCCTCTGAGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTSPLPL*PSELRL
Trigger: CAGCCTCAACTCAGAGGGCAACAGTGGTAGTGGTGA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp TTGTGTCTCCTCATCACTCTGAATCAGGATCTTTCCAATTCGTATGGATCGACATCACCACTACCACTGTaGCCCTCTGAGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LCLLITLNQDLSNSYGSTSPLPL*PSELRL
Trigger: CAGCCTCAACTCAGAGGGCAACAGTGGTAGTGGTGA...TGTCGATCCATACGAATTGGAAAGATCCTGATTCAGAGTGATGAGGAGACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp ATCAGGATCTTTCCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCCCTCTACTGGCTGTCTaGTCACGGATGATGGTCTGT +
Preference number: 5 (lower is better)
Translates to: IRIFPIRMDRQQSRKPCSPLLAV*SRMMVC
Trigger: ACAGACCATCATCCGTGACAAGACAGCCAGTAGAGG...GGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATACTTGTACCCTGTaGGAGTGGTCACCATGCATT +
Preference number: 5 (lower is better)
Translates to: PRGLMALTVLGSPLSASRHTCTL*EWSPCI
Trigger: AATGCATGGTGACCACTCCAACAGGGTACAAGTATG...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTCATACTTGTACCCTGTaGGAGTGGTCACCATGCATT +
Preference number: 5 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLHTCTL*EWSPCI
Trigger: AATGCATGGTGACCACTCCAACAGGGTACAAGTATG...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp ATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTACACGTGCTCTCTCGGTaGCTCCCGCCTCCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: MYSLRLYFRHNARLNYLLHVLSR*LPPPQN
Trigger: GTTCTGAGGAGGCGGGAGCAACCGAGAGAGCACGTG...TAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CAA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGCAGCTGCTCGGGACTaGGGGTTGAGGCAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVAAARD*GLRQSL
Trigger: TAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAGCAGCTGCTCGGGACTaGGGGTTGAGGCAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: TVEECGNSHICETLVELKAAARD*GLRQSL
Trigger: TAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGC...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp AGCTGCATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATGTGAGGAGAATCACCTaGGCCCTGGAGGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SCMYSLRLYFRHNARLNYVRRIT*ALEALF
Trigger: AAACAGAGCCTCCAGGGCCAAGGTGATTCTCCTCAC...ATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACATGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CAA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGTAAACCTTGTTCCATaGCCTCACCGCTTCTCATTA +
Preference number: 5 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLVNLVP*PHRFSL
Trigger: TAATGAGAAGCGGTGAGGCAATGGAACAAGGTTTAC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp TTGTTCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCGTAAACCTTGTTCCATaGCCTCACCGCTTCTCATTA +
Preference number: 5 (lower is better)
Translates to: LFHCLTASHYADPTISLLVNLVP*PHRFSL
Trigger: TAATGAGAAGCGGTGAGGCAATGGAACAAGGTTTAC...GAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp CCAATTCGTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGATATACTTTGGCTCTTaGTGTCTCCTCATCACTCTG +
Preference number: 5 (lower is better)
Translates to: PIRMDRQQSRKPCSIASPIYFGS*CLLITL
Trigger: CAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT...CGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGATCACACAATTTGTACTaGTTTGGGCTGGCTAAGGGA +
Preference number: 5 (lower is better)
Translates to: PRGLMALTVLGSPLSASRSHNLY*FGLAKG
Trigger: TCCCTTAGCCAGCCCAAACAAGTACAAATTGTGTGA...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR CAA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAATCACCACTACCACTGTaGCCCTCTGAGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TVEECGNSHICETLVELKSPLPL*PSELRL
Trigger: CAGCCTCAACTCAGAGGGCAACAGTGGTAGTGGTGA...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAATATACTTTGGCTCTTaGTGTCTCCTCATCACTCTG +
Preference number: 5 (lower is better)
Translates to: PRGLMALTVLGSPLSASRIYFGS*CLLITL
Trigger: CAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp GTATGGATCGACAGCAGTCTCGTAAACCTTGTTCCATTGCCTCACCGCTTCTCAGATGATAACACTGGGTaGAACTCCATGTTCTATAAG +
Preference number: 5 (lower is better)
Translates to: VWIDSSLVNLVPLPHRFSDDNTG*NSMFYK
Trigger: CTTATAGAACATGGAGTTCAACCCAGTGTTATCATC...TGAGAAGCGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp TATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACAGCAGCTGCTCGGGACTaGGGGTTGAGGCAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: YSLRLYFRHNARLNYLLTAAARD*GLRQSL
Trigger: TAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGC...TGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CAA 90 bp ACTGGGTTGAACTCCATGTTCTATAAGAACCTTTACAGCTTCAATTACAGTATTGCAGCTGCTCGGGACTaGGGGTTGAGGCAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: TGLNSMFYKNLYSFNYSIAAARD*GLRQSL
Trigger: TAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGC...AATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTACCTCTACTGGCTGTCTaGTCACGGATGATGGTCTGT +
Preference number: 5 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVPLLAV*SRMMVC
Trigger: ACAGACCATCATCCGTGACAAGACAGCCAGTAGAGG...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373379.5
ENST00000373383.9
CDS-3UTR CAA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTGATGATAACACTGGGTaGAACTCCATGTTCTATAAG +
Preference number: 5 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLDDNTG*NSMFYK
Trigger: CTTATAGAACATGGAGTTCAACCCAGTGTTATCATC...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACTCCAATATTCCCGGTaGTGTAAGGAAAACAATCAA +
Preference number: 5 (lower is better)
Translates to: PRGLMALTVLGSPLSASRLQYSR*CKENNQ
Trigger: TTGATTGTTTTCCTTACACAACCGGGAATATTGGAG...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS-3UTR CAA 90 bp TTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGACATCCCCGGTTCAATCTTTTATCTTCACACAATTaGTACTTGTTTGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LTVLGSPLSASRHPRFNLLSSHN*YLFGLA
Trigger: AGCCAGCCCAAACAAGTACAAATTGTGTGAAGATAA...AAGATTGAACCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS CCA 90 bp TTCATACTTGTACCCTGTTGGAGTGGTCACCATGCATTCTTTATATaGCAGCTGATTCAATCCCTCTTCCACAACAAGTCTGATCAAACG +
Preference number: 5 (lower is better)
Translates to: FILVPCWSGHHAFFI*QLIQSLFHNKSDQT
Trigger: CGTTTGATCAGACTTGTTGTGGAAGAGGGATTGAATCAGCTGCCATATAAAGAATGCATGGTGACCACTCCAACAGGGTACAAGTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000531704.5
CDS-3UTR CAA 90 bp ATGTATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAGCTCGGGACTTGGGGTaGAGGCAGAGTTTACTTGCT +
Preference number: 5 (lower is better)
Translates to: MYSLRLYFRHNARLNYLLARDLG*RQSLLA
Trigger: AGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAGC...TAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CAA 90 bp TATTCTCTGAGGCTCTATTTTAGACACAACGCTAGGCTGAATTATTTGTTAACATCACCACTACCACTGTaGCCCTCTGAGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: YSLRLYFRHNARLNYLLTSPLPL*PSELRL
Trigger: CAGCCTCAACTCAGAGGGCAACAGTGGTAGTGGTGA...TGTTAACAAATAATTCAGCCTAGCGTTGTGTCTAAAATAGAGCCTCAGAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS-3UTR CAA 90 bp TACAGTATTTCCAGTGCTGAGAATTGGATACATCAGAAGGACTTTTCTCCGGTACATACTTGTACCCTGTaGGAGTGGTCACCATGCATT +
Preference number: 5 (lower is better)
Translates to: YSISSAENWIHQKDFSPVHTCTL*EWSPCI
Trigger: AATGCATGGTGACCACTCCAACAGGGTACAAGTATG...TACCGGAGAAAAGTCCTTCTGATGTATCCAATTCTCAGCACTGGAAATACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS-3UTR CAA 90 bp CTTCCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAACTGACTCTCATTaGAGTTTTATTTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LPRGLMALTVLGSPLSASRTDSH*SFICGF
Trigger: GAAGCCACAAATAAAACTCAAATGAGAGTCAGTTCT...GGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp CCTAGAGGATTGATGGCATTAACAGTACTTGGCTCTCCCTTGTCAGCATCCAGAAGAACTGACTCTCATTaGAGTTTTATTTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PRGLMALTVLGSPLSASRRTDSH*SFICGF
Trigger: GAAGCCACAAATAAAACTCAAATGAGAGTCAGTTCT...TCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCATCAATCCTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACACCTTTCCCCCAATCTTaGCTGATTTCATCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTPFPQS*LISSAL
Trigger: CAAAGCTGATGAAATCAGCAAAGATTGGGGGAAAGG...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR CAA 90 bp TCCATTGCCTCACCGCTTCTCATTATGCTGACCCCACAATTTCCCTTCTCAAATAAAGCAGAACAGGAGTaGTCTATGCTCTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: SIASPLLIMLTPQFPFSNKAEQE*SMLFWN
Trigger: ATTCCAAAAGAGCATAGACAACTCCTGTTCTGCTTT...ATTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAGCGGTGAGGCAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462237.5
CDS CCA 90 bp TTCATACTTGTACCCTGTTGGAGTGGTCACCATGCATTCTTTATATaGCAGCTGATTCAATCCCTCTTCCACAACAAGTCTGATGATGAA +
Preference number: 5 (lower is better)
Translates to: FILVPCWSGHHAFFI*QLIQSLFHNKSDDE
Trigger: TTCATCATCAGACTTGTTGTGGAAGAGGGATTGAATCAGCTGCCATATAAAGAATGCATGGTGACCACTCCAACAGGGTACAAGTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462237.5
ENST00000526850.5
ENST00000652605.1
CDS-3UTR CAA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTACATACTTGTACCCTGTaGGAGTGGTCACCATGCATT +
Preference number: 5 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVHTCTL*EWSPCI
Trigger: AATGCATGGTGACCACTCCAACAGGGTACAAGTATG...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAACATACTTGTACCCTGTaGGAGTGGTCACCATGCATT +
Preference number: 5 (lower is better)
Translates to: TVEECGNSHICETLVELKHTCTL*EWSPCI
Trigger: AATGCATGGTGACCACTCCAACAGGGTACAAGTATG...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAATATACTTTGGCTCTTaGTGTCTCCTCATCACTCTG +
Preference number: 5 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTIYFGS*CLLITL
Trigger: CAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGATGATAACACTGGGTaGAACTCCATGTTCTATAAG +
Preference number: 5 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTDDNTG*NSMFYK
Trigger: CTTATAGAACATGGAGTTCAACCCAGTGTTATCATC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTTGCATATACTTCATaGTTGAATTCGGTGCCAACA +
Preference number: 5 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTVAYTS*LNSVPT
Trigger: TGTTGGCACCGAATTCAACAATGAAGTATATGCAAC...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp CCCACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACATTCCTTCCTAGAGGATaGATGGCATTAACAGTACTT +
Preference number: 5 (lower is better)
Translates to: PTLQKNHQFLPRGLMALTFLPRG*MALTVL
Trigger: AAGTACTGTTAATGCCATCAATCCTCTAGGAAGGAA...TGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAACCTTTCCCCCAATCTTaGCTGATTTCATCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: TVEECGNSHICETLVELKPFPQS*LISSAL
Trigger: CAAAGCTGATGAAATCAGCAAAGATTGGGGGAAAGG...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR CAA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGGTAAACCTTGTTCCATaGCCTCACCGCTTCTCATTA +
Preference number: 5 (lower is better)
Translates to: ALILSKTFPSALFCAFEQVNLVP*PHRFSL
Trigger: TAATGAGAAGCGGTGAGGCAATGGAACAAGGTTTAC...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR CAA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAATATACTTTGGCTCTTaGTGTCTCCTCATCACTCTG +
Preference number: 5 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVIYFGS*CLLITL
Trigger: CAGAGTGATGAGGAGACACAAAGAGCCAAAGTATAT...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTAGCATATACTTCATTGTaGAATTCGGTGCCAACAGTA +
Preference number: 5 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVAYTSL*NSVPTV
Trigger: TACTGTTGGCACCGAATTCAACAATGAAGTATATGC...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAAGTTGCATATACTTCATaGTTGAATTCGGTGCCAACA +
Preference number: 5 (lower is better)
Translates to: TVEECGNSHICETLVELKVAYTS*LNSVPT
Trigger: TGTTGGCACCGAATTCAACAATGAAGTATATGCAAC...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp ACAGTAGAGGAATGTGGCAATAGCCACATATGTGAAACCTTAGTAGAGCTAAAATTCCTTCCTAGAGGATaGATGGCATTAACAGTACTT +
Preference number: 5 (lower is better)
Translates to: TVEECGNSHICETLVELKFLPRG*MALTVL
Trigger: AAGTACTGTTAATGCCATCAATCCTCTAGGAAGGAA...TTTTAGCTCTACTAAGGTTTCACATATGTGGCTATTGCCACATTCCTCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp ACACTTCAGAAAAACCACCAATTCCTTCCTAGAGGATTGATGGCATTAACAGTATTCCTTCCTAGAGGATaGATGGCATTAACAGTACTT +
Preference number: 5 (lower is better)
Translates to: TLQKNHQFLPRGLMALTVFLPRG*MALTVL
Trigger: AAGTACTGTTAATGCCATCAATCCTCTAGGAAGGAA...TACTGTTAATGCCATCAATCCTCTAGGAAGGAATTGGTGGTTTTTCTGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000530743.1
ENST00000652605.1
CDS-3UTR CAA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGTTCCTTCCTAGAGGATaGATGGCATTAACAGTACTT +
Preference number: 5 (lower is better)
Translates to: ALILSKTFPSALFCAFEQFLPRG*MALTVL
Trigger: AAGTACTGTTAATGCCATCAATCCTCTAGGAAGGAA...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373383.9
ENST00000652605.1
CDS-3UTR CAA 90 bp GCTTTGATTCTTTCTAAGACATTTCCTTCTGCTCTTTTCTGTGCTTTTGAACAGAAAGCAGAACAGGAGTaGTCTATGCTCTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: ALILSKTFPSALFCAFEQKAEQE*SMLFWN
Trigger: ATTCCAAAAGAGCATAGACAACTCCTGTTCTGCTTT...CTGTTCAAAAGCACAGAAAAGAGCAGAAGGAAATGTCTTAGAAAGAATCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652605.1
CDS CCA 72 bp TGTGACAGGGCATGGAGTCCGGACACTGTAACTCCGTaGCCATACACCGGGCCCCGGGCTATCCCCGCTGCT +
Preference number: 6 (lower is better)
Translates to: CDRAWSPDTVTP*PYTGPRAIPAA
Trigger: AGCAGCGGGGATAGCCCGGGGCCCGGTGTATGGCCACGGAGTTACAGTGTCCGGACTCCATGCCCTGTCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CCA 72 bp ATCACCTTGGCCCTGGAGGCTCTGTTTCCCCCTGCGTaGTCCAGGATCAGATCGCCAGGTCGCAGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: ITLALEALFPPA*SRIRSPGRSCS
Trigger: CGAGCAGCTGCGACCTGGCGATCTGATCCTGGACCACGCAGGGGGAAACAGAGCCTCCAGGGCCAAGGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CAA 90 bp TCGGCCGGCAGGCTAGAATGGGCGTACCCCGTGAGGAGAATCACCTaGGCCCTGGAGGCTCTGTTTCCCCCTGCGTGGTCCAGGATCAGA +
Preference number: 6 (lower is better)
Translates to: SAGRLEWAYPVRRIT*ALEALFPPAWSRIR
Trigger: TCTGATCCTGGACCACGCAGGGGGAAACAGAGCCTCCAGGGCCAAGGTGATTCTCCTCACGGGGTACGCCCATTCTAGCCTGCCGGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CAA 72 bp AGGCTAGAATGGGCGTACCCCGTGAGGAGAATCACCTaGGCCCTGGAGGCTCTGTTTCCCCCTGCGTGGTCC +
Preference number: 6 (lower is better)
Translates to: RLEWAYPVRRIT*ALEALFPPAWS
Trigger: GGACCACGCAGGGGGAAACAGAGCCTCCAGGGCCAAGGTGATTCTCCTCACGGGGTACGCCCATTCTAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CAA 90 bp GGTCCAGGATCAGATCGCCAGGTCGCAGCTGCTCGGGACTTGGGGTaGAGGCAGAGTTTACTTGCTGGTTGTGACAGGGCATGGAGTCCG +
Preference number: 6 (lower is better)
Translates to: GPGSDRQVAAARDLG*RQSLLAGCDRAWSP
Trigger: CGGACTCCATGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGATCTGATCCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CAA 90 bp CTGCGTGGTCCAGGATCAGATCGCCAGGTCGCAGCTGCTCGGGACTaGGGGTTGAGGCAGAGTTTACTTGCTGGTTGTGACAGGGCATGG +
Preference number: 6 (lower is better)
Translates to: LRGPGSDRQVAAARD*GLRQSLLAGCDRAW
Trigger: CCATGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGATCTGATCCTGGACCACGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS TCA 72 bp CAGATCGCCAGGTCGCAGCTGCTCGGGACTTGGGGTTaGGGCAGAGTTTACTTGCTGGTTGTGACAGGGCAT +
Preference number: 6 (lower is better)
Translates to: QIARSQLLGTWG*GRVYLLVVTGH
Trigger: ATGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CAA 72 bp TCAGATCGCCAGGTCGCAGCTGCTCGGGACTTGGGGTaGAGGCAGAGTTTACTTGCTGGTTGTGACAGGGCA +
Preference number: 6 (lower is better)
Translates to: SDRQVAAARDLG*RQSLLAGCDRA
Trigger: TGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CAA 72 bp CCAGGATCAGATCGCCAGGTCGCAGCTGCTCGGGACTaGGGGTTGAGGCAGAGTTTACTTGCTGGTTGTGAC +
Preference number: 6 (lower is better)
Translates to: PGSDRQVAAARD*GLRQSLLAGCD
Trigger: GTCACAACCAGCAAGTAAACTCTGCCTCAACCCCAAGTCCCGAGCAGCTGCGACCTGGCGATCTGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS GCA 72 bp TCATTCATAGGCAGCAGCTTAAGCTGCGCCCCGATCTaGCGGGAGAGTTCGCAGTCCTCTAGGAAGGAGTTG +
Preference number: 6 (lower is better)
Translates to: SFIGSSLSCAPI*RESSQSSRKEL
Trigger: CAACTCCTTCCTAGAGGACTGCGAACTCTCCCGGCAGATCGGGGCGCAGCTTAAGCTGCTGCCTATGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS TCA 72 bp GGACTTGGGGTTGAGGCAGAGTTTACTTGCTGGTTGTaGCAGGGCATGGAGTCCGGACACTGTAACTCCGTG +
Preference number: 6 (lower is better)
Translates to: GLGVEAEFTCWL*QGMESGHCNSV
Trigger: CACGGAGTTACAGTGTCCGGACTCCATGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAACCCCAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS GCA 72 bp CCTCTAGGAAGGAGTTGCCAGCTGGTGCGTCATAGCTaGTACTGTCACCACTACCACTGTTGCCCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: PLGRSCQLVRHS*YCHHYHCCPLS
Trigger: ACTCAGAGGGCAACAGTGGTAGTGGTGACAGTAGCAGCTATGACGCACCAGCTGGCAACTCCTTCCTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS TCA 72 bp GTCTTGTCACGGATGATGGTCTGTAGCTCCCGTATCTaGTCATTCATAGGCAGCAGCTTAAGCTGCGCCCCG +
Preference number: 6 (lower is better)
Translates to: VLSRMMVCSSRI*SFIGSSLSCAP
Trigger: CGGGGCGCAGCTTAAGCTGCTGCCTATGAATGATCAGATACGGGAGCTACAGACCATCATCCGTGACAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS CCA 72 bp TTGAGGCAGAGTTTACTTGCTGGTTGTGACAGGGCATaGAGTCCGGACACTGTAACTCCGTGGCCATACACC +
Preference number: 6 (lower is better)
Translates to: LRQSLLAGCDRA*SPDTVTPWPYT
Trigger: GGTGTATGGCCACGGAGTTACAGTGTCCGGACTCCATGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373373.8
ENST00000373379.5
ENST00000373383.9
ENST00000462237.5
ENST00000531704.5
CDS TCA 72 bp AAGTTGTCACGGATGATGGTCTGTAGCTCCCGTATCTaGTCATTCATAGGCAGCAGCTTAAGCTGCGCCCCG +
Preference number: 6 (lower is better)
Translates to: KLSRMMVCSSRI*SFIGSSLSCAP
Trigger: CGGGGCGCAGCTTAAGCTGCTGCCTATGAATGATCAGATACGGGAGCTACAGACCATCATCCGTGACAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373373.8
CDS TCA 72 bp TGGAGCCCTAGTTACTGCCTCATGCTGAACTCACCATaGGGAGTGGAGAACAGACTGAGTAGGATGATAACA +
Preference number: 6 (lower is better)
Translates to: WSPSYCLMLNSP*GVENRLSRMIT
Trigger: TGTTATCATCCTACTCAGTCTGTTCTCCACTCCTCATGGTGAGTTCAGCATGAGGCAGTAACTAGGGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373379.5