RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UPP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000183696

Ensembl transcript IDs: ENST00000331803.8, ENST00000395560.7, ENST00000395564.9, ENST00000416681.5, ENST00000417464.6, ENST00000421046.5, ENST00000432131.5, ENST00000436673.5, ENST00000444999.5, ENST00000457596.5, ENST00000482015.5, ENST00000495446.1

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTGCTGATCTaGTCCCCTTCCAGGCGGTTCAGGAGGGTGACACACACCACGGCC +
Preference number: 1 (lower is better)
Translates to: GLCWYSLSTLRGLLI*SPSRRFRRVTHTTA
Trigger: GGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
3UTR GCA 90 bp AGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCTCGATATTaGGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGT +
Preference number: 1 (lower is better)
Translates to: RRCTWRQTPRTPSRY*GRRLHRLPPDTPAC
Trigger: ACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR GCA 90 bp CACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGCTaGCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAG +
Preference number: 1 (lower is better)
Translates to: HRGLHLDIADAGCIG*LQIRLLVLLRVGAE
Trigger: CTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR GCA 90 bp GGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTA +
Preference number: 1 (lower is better)
Translates to: GGKHRGLHLDIADAG*IGCLQIRLLVLLRV
Trigger: TACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR GCA 90 bp ACTGTGGTGAACTCGCTCAGCTCTGCAGAACACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTC +
Preference number: 1 (lower is better)
Translates to: TVVNSLSSAEHSNSS*TSFLLRSVFRMTRF
Trigger: GAAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCAGAGCTGAGCGAGTTCACCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
3UTR GCA 90 bp AGGACAATCTGCTCAAACTCTGCCTTGAAGCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTGCCGGGCTCCAGACCTATCCCACCA +
Preference number: 1 (lower is better)
Translates to: RTICSNSALKQVSTA*SVMTTVPGSRPIPP
Trigger: TGGTGGGATAGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR GCA 90 bp CGTTTTCCGGATGACCCGCTTCCCCAGGACAATCTGCTCAAACTCTaGCTTGAAGCAGGTATCCACTGCCTGCTCTGTTATGACCACAGT +
Preference number: 1 (lower is better)
Translates to: RFPDDPLPQDNLLKL*LEAGIHCLLCYDHS
Trigger: ACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCTGGGGAAGCGGGTCATCCGGAAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR GCA 90 bp TTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCCCCAGGACAATCTaGTCAAACTCTGCCTTGAAGCAGGTATCCACTGCCTGCTCTGTT +
Preference number: 1 (lower is better)
Translates to: LLRSVFRMTRFPRTI*SNSALKQVSTACSV
Trigger: AACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACCTTAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR-3UTR GCA 90 bp CCTTCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCCGGCTGCATAGGCTaGCTCCAGATACGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: PSRRFRRVTHTTAAWRPQAGCIG*LQIRLL
Trigger: AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGC...CTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR GCA 90 bp ACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATA +
Preference number: 2 (lower is better)
Translates to: TAAWRPQALHMAANTEDSIADAG*IGCLQI
Trigger: TATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAAT...GGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR GCA 90 bp AGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGGGAGGCCGCAGGCGCTaGACATGGCGGCAAACACCG +
Preference number: 2 (lower is better)
Translates to: STLRGLLIWSPSRRFRRVGGRRR*TWRQTP
Trigger: CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCC...CACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CCA 90 bp CACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGTCCAAGGTGCACATaGTGTTCCCCACCACTGTGG +
Preference number: 2 (lower is better)
Translates to: HTPRPLGGRRRCTWRQTPSPRCT*CSPPLW
Trigger: CCACAGTGGTGGGGAACACCATGTGCACCTTGGACT...CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CCA 90 bp TGCGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCGCAGGCGCTGCACATaGCGGCAAACACCGAGGACT +
Preference number: 2 (lower is better)
Translates to: CGLCWYSLSTLRGLLIWSRRRCT*RQTPRT
Trigger: AGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCG...GGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
3UTR-3UTR TCA 90 bp GGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCGGTCCGTTTTCCGGATaGCCCGCTTCCCCAGGACAA +
Preference number: 2 (lower is better)
Translates to: GCLQIRLLVLLRVGAESPGPFSG*PASPGQ
Trigger: TTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACC...GGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR GCA 90 bp AGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATA +
Preference number: 2 (lower is better)
Translates to: STLRGLLIWSPSRRFRRVIADAG*IGCLQI
Trigger: TATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAAT...CACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR TCA 90 bp AAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCGGTCCGTTTTCCGGATaGCCCGCTTCCCCAGGACAA +
Preference number: 2 (lower is better)
Translates to: KHRGLHLDIADAGCIGCLGPFSG*PASPGQ
Trigger: TTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACC...GAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR TCA 90 bp AAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCTCCCCACCACTGTGGTaGACTCGCTCAGCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: KHRGLHLDIADAGCIGCLSPPLW*TRSALQ
Trigger: CTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGA...GAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR GCA 90 bp CTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGACTCCATCTCGATATTaGGGACGCCGGCTGCATAGG +
Preference number: 2 (lower is better)
Translates to: LSTLRGLLIWSPSRRFRRTPSRY*GRRLHR
Trigger: CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGT...CCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR TCA 90 bp GTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGCAGAACACGGTCCGTTTTCCGGATaGCCCGCTTCCCCAGGACAA +
Preference number: 2 (lower is better)
Translates to: VHMVFPTTVVNSLSSAEHGPFSG*PASPGQ
Trigger: TTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACC...GTGTTCTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
3UTR-3UTR GCA 90 bp TGCGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCGAACTCGCTCAGCTCTaGAGAACACAGCAACAGCTC +
Preference number: 2 (lower is better)
Translates to: CGLCWYSLSTLRGLLIWSELAQL*RTQQQL
Trigger: GAGCTGTTGCTGTGTTCTGCAGAGCTGAGCGAGTTC...GGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
3UTR-3UTR CCA 90 bp TGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGAGTCCAAGGTGCACATaGTGTTCCCCACCACTGTGG +
Preference number: 2 (lower is better)
Translates to: WRQTPRTPSRYCGRRLHRSPRCT*CSPPLW
Trigger: CCACAGTGGTGGGGAACACCATGTGCACCTTGGACT...CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CCA 90 bp CCATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTAGTCCAAGGTGCACATaGTGTTCCCCACCACTGTGG +
Preference number: 2 (lower is better)
Translates to: PSRYCGRRLHRLPPDTPASPRCT*CSPPLW
Trigger: CCACAGTGGTGGGGAACACCATGTGCACCTTGGACT...AGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR GCA 90 bp CTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 2 (lower is better)
Translates to: LSTLRGLLIWSPSRRFRRHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...CCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR GCA 90 bp TTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGACACACCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 2 (lower is better)
Translates to: LRGLLIWSPSRRFRRVTHHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...GTGTGTCACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR GCA 90 bp TTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCTCGATCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 2 (lower is better)
Translates to: LEAAGAAHGGKHRGLHLDHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...ATCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR CAA 90 bp TTCCGGATGACCCGCTTCCCCAGGACAATCTGCTCAAACTCTGCCTaGAAGCAGGTATCCACTGCCTGCTCTGTTATGACCACAGTGCCG +
Preference number: 2 (lower is better)
Translates to: FRMTRFPRTICSNSA*KQVSTACSVMTTVP
Trigger: CGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCTGGGGAAGCGGGTCATCCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR-3UTR GCA 90 bp TCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGTCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 2 (lower is better)
Translates to: SRYCGRRLHRLPPDTPACHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...ACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR GCA 90 bp GAAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTG +
Preference number: 2 (lower is better)
Translates to: EVQGAHGVPHHCGELAQLQVSTA*SVMTTV
Trigger: CACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG...GAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR-3UTR GCA 90 bp AAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 2 (lower is better)
Translates to: KSKVHMVFPTTVVNSLSSHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...AGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
3UTR-3UTR GCA 90 bp CAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 2 (lower is better)
Translates to: QQLLHQLLVKVRFPDDPLHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...AAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
3UTR-3UTR GCA 90 bp TGCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 2 (lower is better)
Translates to: CRTQQQLLHQLLVKVRFPHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...CGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
3UTR CAA 90 bp AGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTaGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGA +
Preference number: 2 (lower is better)
Translates to: RFLCKVCSKSTQQGI*DNAFNGKSSQQVCG
Trigger: TCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
3UTR-3UTR TCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGCTCTTAATCGCGATCTaGTTTTCTAGATTCTTGTGT +
Preference number: 2 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLLLIAI*FSRFLC
Trigger: ACACAAGAATCTAGAAAATCAGATCGCGATTAAGAG...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
3UTR-3UTR GCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTTTCTTGTGTAAAGTGTaGTCAAAGTCCACACAACAG +
Preference number: 2 (lower is better)
Translates to: LEETPNQANIIENAPMKLFLCKV*SKSTQQ
Trigger: CTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
3UTR CCA 72 bp ACACCACGGCCGCTTGGAGGCCGCAGGCGCTGCACATaGCGGCAAACACCGAGGACTCCATCTCGATATTGC +
Preference number: 3 (lower is better)
Translates to: TPRPLGGRRRCT*RQTPRTPSRYC
Trigger: GCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CAA 90 bp GGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCCCATCCAGACGGCCTaGCCCTTCATAGAAGTCCAA +
Preference number: 3 (lower is better)
Translates to: GRLEAAGAAHGGKHRGLHPIQTA*PFIEVQ
Trigger: TTGGACTTCTATGAAGGGCAAGGCCGTCTGGATGGG...ATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CAA 90 bp GGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 3 (lower is better)
Translates to: GRLEAAGAAHGGKHRGLHSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...ATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR CCA 72 bp TGGTACTCGCTGAGCACATTGCGAGGGCTGCTGATCTaGTCCCCTTCCAGGCGGTTCAGGAGGGTGACACAC +
Preference number: 3 (lower is better)
Translates to: WYSLSTLRGLLI*SPSRRFRRVTH
Trigger: GTGTGTCACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CAA 90 bp AGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGCCCATCCAGACGGCCTaGCCCTTCATAGAAGTCCAA +
Preference number: 3 (lower is better)
Translates to: STLRGLLIWSPSRRFRRVPIQTA*PFIEVQ
Trigger: TTGGACTTCTATGAAGGGCAAGGCCGTCTGGATGGG...CACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR GCA 72 bp CACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATACGCCTGCTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: HRGLHLDIADAG*IGCLQIRLLVL
Trigger: AAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR GCA 72 bp ACATGGCGGCAAACACCGAGGACTCCATCTCGATATTaGGGACGCCGGCTGCATAGGCTGCCTCCAGATACG +
Preference number: 3 (lower is better)
Translates to: TWRQTPRTPSRY*GRRLHRLPPDT
Trigger: CGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CAA 90 bp TTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGACACACTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 3 (lower is better)
Translates to: LRGLLIWSPSRRFRRVTHSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...GTGTGTCACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CAA 90 bp TACTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 3 (lower is better)
Translates to: YSLSTLRGLLIWSPSRRFSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...GAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR GCA 72 bp CTCCATCTCGATATTGCGGACGCCGGCTGCATAGGCTaGCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTA +
Preference number: 3 (lower is better)
Translates to: LHLDIADAGCIG*LQIRLLVLLRV
Trigger: TACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
3UTR-3UTR CAA 90 bp GTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGCAGAACACTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 3 (lower is better)
Translates to: VHMVFPTTVVNSLSSAEHSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...GTGTTCTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
3UTR GCA 72 bp TGCTCAAACTCTGCCTTGAAGCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTGCCGGGCTCCAGACCT +
Preference number: 3 (lower is better)
Translates to: CSNSALKQVSTA*SVMTTVPGSRP
Trigger: AGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR GCA 72 bp TCCGTTTTCCGGATGACCCGCTTCCCCAGGACAATCTaGTCAAACTCTGCCTTGAAGCAGGTATCCACTGCC +
Preference number: 3 (lower is better)
Translates to: SVFRMTRFPRTI*SNSALKQVSTA
Trigger: GGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR-3UTR CAA 90 bp CAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTTGCTCAAACTCTGCCTaGAAGCAGGTATCCACTGCC +
Preference number: 3 (lower is better)
Translates to: QQLLHQLLVKVRFPDDPLCSNSA*KQVSTA
Trigger: GGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA...AAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR GCA 72 bp GATGACCCGCTTCCCCAGGACAATCTGCTCAAACTCTaGCTTGAAGCAGGTATCCACTGCCTGCTCTGTTAT +
Preference number: 3 (lower is better)
Translates to: DDPLPQDNLLKL*LEAGIHCLLCY
Trigger: ATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCTGGGGAAGCGGGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
3UTR-3UTR CAA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCAGTTTCCTGGCACTATaGTCAGATTTCTTGTTTAGT +
Preference number: 3 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGSFLAL*SDFLFS
Trigger: ACTAAACAAGAAATCTGACAATAGTGCCAGGAAACT...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGGGCGGTTCAGGAGGGTaGCACACACCACGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SRRFRRVTHTTAAWRPQAGGSGG*HTPRPL
Trigger: AAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCC...CGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp ACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCGGCGGTTCAGGAGGGTaGCACACACCACGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: TAAWRPQALHMAANTEDSGGSGG*HTPRPL
Trigger: AAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCC...GGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp ACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: TAAWRPQALHMAANTEDSFQAVS*RRVTRD
Trigger: GTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAA...GGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp TCCCCTTCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCCAGCCCTGGCCCGGTaGTCGGGAATGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPSRRFRRVTHTTAAWRPPALAR*SGMWSW
Trigger: CCAGCTCCACATTCCCGACCACCGGGCCAGGGCTGG...CGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGAAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457596.5
CDS-3UTR TCA 90 bp AGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGCATTGCGAGGGCTGCTaGTCTGGTCCCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RRFRRVTHTTAAWRPQALHCEGC*SGPLPG
Trigger: GCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATG...CAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CCTTCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGCAAGCCCACTCGGCCTaGGCAGAGAGCCGCTACACC +
Preference number: 4 (lower is better)
Translates to: PSRRFRRVTHTTAAWRPQQAHSA*AESRYT
Trigger: GGTGTAGCGGCTCTCTGCGCAGGCCGAGTGGGCTTG...CTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417464.6
CDS-3UTR CCA 90 bp GGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATGCGTGGAACCAGCCCTaGCCCGGTGGTCGGGAATGT +
Preference number: 4 (lower is better)
Translates to: GRLEAAGAAHGGKHRGLHAWNQP*PGGREC
Trigger: ACATTCCCGACCACCGGGCCAGGGCTGGTTCCACGC...ATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457596.5
CDS-3UTR CCA 90 bp AGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGGACAGACGTCTGCAGTaGGAGGCGCTCCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: RRFRRVTHTTAAWRPQALDRRLQ*EALQAF
Trigger: GAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTC...CAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGCGCAGGCGCTGCACATaGCGGCAAACACCGAGGACT +
Preference number: 4 (lower is better)
Translates to: HTPRPLGGRRRCTWRQTPRRRCT*RQTPRT
Trigger: AGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCG...CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp TCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGTCTGCTGGTACTCGCTaGGCACATTGCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRRFRRVTHTTAAWRPQASAGTR*AHCEGC
Trigger: GCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGA...CGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS-3UTR GCA 90 bp GCTCACCAGCCGCTGCGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTGCGCCATCCTCGCACTaGGACACCGGCGACAAACGC +
Preference number: 4 (lower is better)
Translates to: AHQPLRPLLVLAEHIARAAPSSH*DTGDKR
Trigger: GCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGCGC...AGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCCGCAGCGGCTGGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395560.7
CDS-3UTR GCA 90 bp AGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGGCCGGCTGCATAGGCTaGCTCCAGATACGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RRFRRVTHTTAAWRPQALAGCIG*LQIRLL
Trigger: AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGC...CAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp ACACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCAGCCGCTGCGGCCTCTaGTGGTACTCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: THTTAAWRPQALHMAANTSRCGL*WYSLST
Trigger: TGTGCTCAGCGAGTACCAGCAGAGGCCGCAGCGGCT...GGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS-3UTR CCA 90 bp CTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGCACACCACGGCCGCTTaGAGGCCGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LSTLRGLLIWSPSRRFRRHTTAA*RPQALH
Trigger: GTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTG...CCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCTCGATGTGCGCCGGAGCACTaGGGCGGAGGAAACCGGGCT +
Preference number: 4 (lower is better)
Translates to: LGGRRRCTWRQTPRTPSRCAPEH*GGGNRA
Trigger: AGCCCGGTTTCCTCCGCCCCAGTGCTCCGGCGCACA...TCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457596.5
CDS-3UTR TCA 90 bp CACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGCACCTCACCAAGCCCTaGATTGGGACAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: HTPRPLGGRRRCTWRQTPHLTKP*IGTGDE
Trigger: CTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTG...CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR GCA 90 bp ACACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGCCGGCTGCATAGGCTaGCTCCAGATACGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: THTTAAWRPQALHMAANTAGCIG*LQIRLL
Trigger: AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGC...GGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp GGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCGGAGGCCGCAGGCGCTaGACATGGCGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: GCLQIRLLVLLRVGAESPGGRRR*TWRQTP
Trigger: CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCC...GGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCTCGATGCAGGTCTGCGGAGGTaGAGGGCAGCGCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LEAAGAAHGGKHRGLHLDAGLRR*RAALRP
Trigger: AGGCCTGAGCGCTGCCCTGCACCTCCGCAGACCTGC...ATCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS-3UTR CCA 90 bp TACTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCCGGTGGCCCCGCGGCTaGGGCCAGCGGAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: YSLSTLRGLLIWSPSRRFRWPRG*GQRREM
Trigger: CATTTCTCTCCGCTGGCCCCAGCCGCGGGGCCACCG...GAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457596.5
CDS-3UTR CCA 90 bp CTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCCTTGCCCTTCATAGAAGTCCTGTCTGTCTGGCGGTaGCCCCGCGGCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRVGAESPIQTALPFIEVLSVWR*PRGWGQ
Trigger: CTGGCCCCAGCCGCGGGGCCACCGCCAGACAGACAG...GACTTCTATGAAGGGCAAGGCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457596.5
CDS-3UTR CCA 90 bp CCATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTCACACCACGGCCGCTTaGAGGCCGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PSRYCGRRLHRLPPDTPAHTTAA*RPQALH
Trigger: GTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTG...AGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp GCTCACCAGCCGCTGCGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTCTGCCTGCTCTGTTATaGCCACAGTGCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AHQPLRPLLVLAEHIARALPALL*PQCRAP
Trigger: TGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAG...AGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCCGCAGCGGCTGGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS-3UTR TCA 90 bp CTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCTCGACATTGCGAGGGCTGCTaGTCTGGTCCCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGGRRRCTWRQTPRTPSRHCEGC*SGPLPG
Trigger: GCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATG...TCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCCGGCGACAAACGCAATaGTCCAGGGCCGGACGAAGG +
Preference number: 4 (lower is better)
Translates to: RPLLVLAEHIARAADLVPRRQTQ*SRAGRR
Trigger: CCTTCGTCCGGCCCTGGAGCATTGCGTTTGTCGCCG...GGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395560.7
CDS-3UTR GCA 90 bp GGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: GCLQIRLLVLLRVGAESPFQAVS*RRVTRD
Trigger: GTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAA...GGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CTGGTACTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: LVLAEHIARAADLVPFQAFQAVS*RRVTRD
Trigger: GTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAA...CGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGGGAGGCCGCAGGCGCTaGACATGGCGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: WRQTPRTPSRYCGRRLHRGGRRR*TWRQTP
Trigger: CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCC...CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp AGGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCGCAGGTCTGCGGAGGTaGAGGGCAGCGCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RLPPDTPACPSPCRSREPAGLRR*RAALRP
Trigger: AGGCCTGAGCGCTGCCCTGCACCTCCGCAGACCTGC...GGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS-3UTR CCA 90 bp GTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGCAGAACACCCCGGTCTGTCTGTCTaGCGGTGGCCCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VHMVFPTTVVNSLSSAEHPGLSV*RWPRGW
Trigger: CCAGCCGCGGGGCCACCGCCAGACAGACAGACCGGG...GTGTTCTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457596.5
CDS-3UTR CCA 90 bp CTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCTCGACTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LGGRRRCTWRQTPRTPSRLHWLP*PPFRQL
Trigger: CAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAG...TCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp AGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGCTGAGTCCAAGGTGCACATaGTGTTCCCCACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: RRFRRVTHTTAAWRPQALSPRCT*CSPPLW
Trigger: CCACAGTGGTGGGGAACACCATGTGCACCTTGGACT...CAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp ACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCCACCAAGCCCTGAATTaGGACAGGAGACGAGACGTG +
Preference number: 4 (lower is better)
Translates to: TAAWRPQALHMAANTEDSHQALN*DRRRDV
Trigger: CACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTG...GGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR GCA 90 bp TGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGGCGCCATCCTCGCACTaGGACACCGGCGACAAACGC +
Preference number: 4 (lower is better)
Translates to: WRQTPRTPSRYCGRRLHRAPSSH*DTGDKR
Trigger: GCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGCGC...CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR GCA 90 bp TACTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGCGGACAGACGTCTaGAGTGGGAGGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YSLSTLRGLLIWSPSRRFRRTDV*SGRRSR
Trigger: CCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCT...GAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp ACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCGAACTCGCTCAGCTCTaGAGAACACAGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: TAAWRPQALHMAANTEDSELAQL*RTQQQL
Trigger: GAGCTGTTGCTGTGTTCTGCAGAGCTGAGCGAGTTC...GGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGAGCCGCTGCGGCCTCTaGTGGTACTCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LSTLRGLLIWSPSRRFRRSRCGL*WYSLST
Trigger: TGTGCTCAGCGAGTACCAGCAGAGGCCGCAGCGGCT...CCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS-3UTR GCA 90 bp CTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCCTTGCCCTTCATAGAAGTCTGGGCCCACTCGGCCTaGGCAGAGAGCCGCTACACC +
Preference number: 4 (lower is better)
Translates to: LRVGAESPIQTALPFIEVWAHSA*AESRYT
Trigger: GGTGTAGCGGCTCTCTGCGCAGGCCGAGTGGGCCCA...GACTTCTATGAAGGGCAAGGCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR GCA 90 bp GGAGCAGAGAGCCCCATCCAGACGGCCTTGCCCTTCATAGAAGTCCAAGGTGCATGGGCCCACTCGGCCTaGGCAGAGAGCCGCTACACC +
Preference number: 4 (lower is better)
Translates to: GAESPIQTALPFIEVQGAWAHSA*AESRYT
Trigger: GGTGTAGCGGCTCTCTGCGCAGGCCGAGTGGGCCCA...TGCACCTTGGACTTCTATGAAGGGCAAGGCCGTCTGGATGGGGCTCTCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR GCA 90 bp GCTCACCAGCCGCTGCGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTGACGTGTCGACGAGCTaGGGAGTTCCTCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AHQPLRPLLVLAEHIARADVSTS*GVPRFS
Trigger: AGAGAAGCGAGGAACTCCGCAGCTCGTCGACACGTC...AGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCCGCAGCGGCTGGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395560.7
CDS-3UTR CCA 90 bp GGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCGACAGACGTCTGCAGTaGGAGGCGCTCCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GCLQIRLLVLLRVGAESPDRRLQ*EALQAF
Trigger: GAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTC...GGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp TTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGACACACTCAGAGGAGAGCGGCTaGAGGCGGACAGACGTCTGC +
Preference number: 4 (lower is better)
Translates to: LRGLLIWSPSRRFRRVTHSEESG*RRTDVC
Trigger: GCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGA...GTGTGTCACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGCGAGGGCTGCTGATCTaGTCCCCTTCCAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: LSTLRGLLIWSPSRRFRRRGLLI*SPSRRF
Trigger: GAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCG...CCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGAGTTCCTCGCTTCTCTaGGCCCACTCGGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LSTLRGLLIWSPSRRFRRSSSLL*AHSACA
Trigger: TGCGCAGGCCGAGTGGGCCCAGAGAAGCGAGGAACT...CCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR CCA 90 bp TTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGACACACAGTTCCTCGCTTCTCTaGGCCCACTCGGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LRGLLIWSPSRRFRRVTHSSSLL*AHSACA
Trigger: TGCGCAGGCCGAGTGGGCCCAGAGAAGCGAGGAACT...GTGTGTCACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR TCA 90 bp CCTTCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCTCAAACTCTGCCTTaGAGCAGGTATCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: PSRRFRRVTHTTAAWRPQAQTLP*SRYPLP
Trigger: AGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGC...CTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp TTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGACACACTCCCCACCACTGTGGTaGACTCGCTCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRGLLIWSPSRRFRRVTHSPPLW*TRSALQ
Trigger: CTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGA...GTGTGTCACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp AGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGTCCCCACCACTGTGGTaGACTCGCTCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: STLRGLLIWSPSRRFRRVSPPLW*TRSALQ
Trigger: CTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGA...CACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp GGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCGGGCTCCAGACTTGTaGCTTTCAGCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GRLEAAGAAHGGKHRGLHRAPDL*LSAFSA
Trigger: TGCAGAGAAAGCTGAAAGTCACAAGTCTGGAGCCCG...ATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CATGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAAGGCGGACAGACGTCTaGAGTGGGAGGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HGGKHRGLHLDIADAGCIRRTDV*SGRRSR
Trigger: CCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCT...TATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: SRRFRRVTHTTAAWRPQAQVSTA*SVMTTV
Trigger: CACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG...CGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: SRRFRRVTHTTAAWRPQAHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...CGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CCTTCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGAACTCGCTCAGCTCTaGAGAACACAGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: PSRRFRRVTHTTAAWRPQELAQL*RTQQQL
Trigger: GAGCTGTTGCTGTGTTCTGCAGAGCTGAGCGAGTTC...CTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp ACGGCCGCTTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: TAAWRPQALHMAANTEDSHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...GGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAAGCGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp AAGCAGGTATCCACTGCCTGCTCTGTTATGACCACAGTGCCGGGCTCCAGACCTTGGGCCCACTCGGCCTaGGCAGAGAGCCGCTACACC +
Preference number: 4 (lower is better)
Translates to: KQVSTACSVMTTVPGSRPWAHSA*AESRYT
Trigger: GGTGTAGCGGCTCTCTGCGCAGGCCGAGTGGGCCCA...AGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR CCA 90 bp CCATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTGACAGACGTCTGCAGTaGGAGGCGCTCCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: PSRYCGRRLHRLPPDTPADRRLQ*EALQAF
Trigger: GAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTC...AGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGTCCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LDIADAGCIGCLQIRLLVLHWLP*PPFRQL
Trigger: CAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAG...GACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CCATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTCGCAGGCGCTGCACATaGCGGCAAACACCGAGGACT +
Preference number: 4 (lower is better)
Translates to: PSRYCGRRLHRLPPDTPARRRCT*RQTPRT
Trigger: AGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCG...AGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp TCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGTCATTGCGAGGGCTGCTaGTCTGGTCCCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRYCGRRLHRLPPDTPACHCEGC*SGPLPG
Trigger: GCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATG...ACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp CTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGCACCTCACCAAGCCCTaGATTGGGACAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: LSTLRGLLIWSPSRRFRRHLTKP*IGTGDE
Trigger: CTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTG...CCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR GCA 90 bp GATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCGCCGGCTGCATAGGCTaGCTCCAGATACGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: DTPACPSPCRSREPHPDGAGCIG*LQIRLL
Trigger: AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGC...GCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp GTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGCGACAGACGTCTGCAGTaGGAGGCGCTCCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: VQGAHGVPHHCGELAQLCDRRLQ*EALQAF
Trigger: GAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTC...GCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR CCA 90 bp CATGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATATCAGAGGAGAGCGGCTaGAGGCGGACAGACGTCTGC +
Preference number: 4 (lower is better)
Translates to: HGGKHRGLHLDIADAGCISEESG*RRTDVC
Trigger: GCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGA...TATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCCTTGCCCTTCATAGAAGTCCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LRVGAESPIQTALPFIEVLHWLP*PPFRQL
Trigger: CAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAG...GACTTCTATGAAGGGCAAGGCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTCGCAGGCGCTGCACATaGCGGCAAACACCGAGGACT +
Preference number: 4 (lower is better)
Translates to: HLDIADAGCIGCLQIRLLRRRCT*RQTPRT
Trigger: AGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCG...AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCCACACCACGGCCGCTTaGAGGCCGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGHTTAA*RPQALH
Trigger: GTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTG...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR CCA 90 bp CATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTCGAGGGCTGCTGATCTaGTCCCCTTCCAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: HLDIADAGCIGCLQIRLLRGLLI*SPSRRF
Trigger: GAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCG...AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CATGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATACGAGGGCTGCTGATCTaGTCCCCTTCCAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: HGGKHRGLHLDIADAGCIRGLLI*SPSRRF
Trigger: GAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCG...TATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp GTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGCAGTTCCTCGCTTCTCTaGGCCCACTCGGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VQGAHGVPHHCGELAQLCSSSLL*AHSACA
Trigger: TGCGCAGGCCGAGTGGGCCCAGAGAAGCGAGGAACT...GCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000444999.5
ENST00000457596.5
CDS-3UTR TCA 90 bp TCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGTGCCAGCGGAGAGAAATaGCAGCGTGGAACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRYCGRRLHRLPPDTPACASGEK*QRGTSP
Trigger: AGGGCTGGTTCCACGCTGTCATTTCTCTCCGCTGGC...ACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457596.5
CDS-3UTR TCA 90 bp CTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCCTTGCCCTTCATAGAAGTCGGTCCGTTTTCCGGATaGCCCGCTTCCCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: LRVGAESPIQTALPFIEVGPFSG*PASPGQ
Trigger: TTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACC...GACTTCTATGAAGGGCAAGGCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp CATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTTCCCCACCACTGTGGTaGACTCGCTCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HLDIADAGCIGCLQIRLLSPPLW*TRSALQ
Trigger: CTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGA...AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp AAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGGCGGTTCAGGAGGGTaGCACACACCACGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: KSKVHMVFPTTVVNSLSSGGSGG*HTPRPL
Trigger: AAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCC...AGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp GGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCACTTTCAGCTTTCTCTaGATTGGCTCCCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GCLQIRLLVLLRVGAESPTFSFL*IGSRGR
Trigger: GCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGT...GGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCGCAGGTCTGCGGAGGTaGAGGGCAGCGCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGAGLRR*RAALRP
Trigger: AGGCCTGAGCGCTGCCCTGCACCTCCGCAGACCTGC...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR GCA 90 bp GATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCGACGTGTCGACGAGCTaGGGAGTTCCTCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DTPACPSPCRSREPHPDGDVSTS*GVPRFS
Trigger: AGAGAAGCGAGGAACTCCGCAGCTCGTCGACACGTC...GCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000457596.5
CDS-3UTR TCA 90 bp ACCTATCCCACCAGAAGTGCCAATGCGGATGATAGTGACGTTGGAGCACCGGGCCTGCCTGCTCTGTTATaGCCACAGTGCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TYPTRSANADDSDVGAPGLPALL*PQCRAP
Trigger: TGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAG...GCCCGGTGCTCCAACGTCACTATCATCCGCATTGGCACTTCTGGTGGGATAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR TCA 90 bp CAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCCCCTGCCTGCTCTGTTATaGCCACAGTGCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QLLHQLLVKVRFPDDPLPLPALL*PQCRAP
Trigger: TGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAG...GGGAAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR TCA 90 bp CTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGCTCAAACTCTGCCTTaGAGCAGGTATCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: LAEHIARAADLVPFQAVQAQTLP*SRYPLP
Trigger: AGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGC...CTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp CACTGCCTGCTCTGTTATGACCACAGTGCCGGGCTCCAGACCTATCCCACCAGACACCTCACCAAGCCCTaGATTGGGACAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: HCLLCYDHSAGLQTYPTRHLTKP*IGTGDE
Trigger: CTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTG...TCTGGTGGGATAGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR TCA 90 bp CTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGCGGGCTCCAGACTTGTaGCTTTCAGCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSTLRGLLIWSPSRRFRRRAPDL*LSAFSA
Trigger: TGCAGAGAAAGCTGAAAGTCACAAGTCTGGAGCCCG...CCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp GCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGGCGCCATCCTCGCACTaGGACACCGGCGACAAACGC +
Preference number: 4 (lower is better)
Translates to: AEHSNSSCTSFLLRSVFRAPSSH*DTGDKR
Trigger: GCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGCGC...CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGFQAVS*RRVTRD
Trigger: GTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAA...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR GCA 90 bp CAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCCCCAGGACAATCTGTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: QLLVKVRFPDDPLPQDNLFQAVS*RRVTRD
Trigger: GTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAA...CAGATTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp CTCCAGACCTATCCCACCAGAAGTGCCAATGCGGATGATAGTGACGTTGGAGCAAGGCGGACAGACGTCTaGAGTGGGAGGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQTYPTRSANADDSDVGARRTDV*SGRRSR
Trigger: CCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCT...TGCTCCAACGTCACTATCATCCGCATTGGCACTTCTGGTGGGATAGGTCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR GCA 90 bp CTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGTCACTTTCAGCTTTCTCTaGATTGGCTCCCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LDIADAGCIGCLQIRLLVTFSFL*IGSRGR
Trigger: GCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGT...GACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CATGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: HGGKHRGLHLDIADAGCIIADAG*IGCLQI
Trigger: TATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAAT...TATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TGCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGGAGGCCGCAGGCGCTaGACATGGCGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: CRTQQQLLHQLLVKVRFPGGRRR*TWRQTP
Trigger: CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCC...CGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp CCCACCAGAAGTGCCAATGCGGATGATAGTGACGTTGGAGCACCGGGCATAGTACTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTG +
Preference number: 4 (lower is better)
Translates to: PTRSANADDSDVGAPGIVLHWLP*PPFRQL
Trigger: CAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAG...TACTATGCCCGGTGCTCCAACGTCACTATCATCCGCATTGGCACTTCTGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR TCA 90 bp AGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCCTGCCTGCTCTGTTATaGCCACAGTGCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SNSSCTSFLLRSVFRMTRLPALL*PQCRAP
Trigger: TGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAG...GCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR TCA 90 bp GATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCGCTCAAACTCTGCCTTaGAGCAGGTATCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: DTPACPSPCRSREPHPDGAQTLP*SRYPLP
Trigger: AGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGC...GCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp AAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGGTCCGTTTTCCGGATaGCCCGCTTCCCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: KSKVHMVFPTTVVNSLSSGPFSG*PASPGQ
Trigger: TTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACC...AGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp TGCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGAGGCGGACAGACGTCTaGAGTGGGAGGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CRTQQQLLHQLLVKVRFPRRTDV*SGRRSR
Trigger: CCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCT...CGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp GGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAACTTTCAGCTTTCTCTaGATTGGCTCCCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GCIGCLQIRLLVLLRVGATFSFL*IGSRGR
Trigger: GCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGT...TGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TGCGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTGCTGATCTGGTCCCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: CGLCWYSLSTLRGLLIWSQVSTA*SVMTTV
Trigger: CACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG...GGACCAGATCAGCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS-3UTR GCA 90 bp TTGGAGGCCGCAGGCGCTGCACATGGCGGCAAACACCGAGGACTCCATCTCGATCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: LEAAGAAHGGKHRGLHLDQVSTA*SVMTTV
Trigger: CACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG...ATCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TGCATAGGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: CIGCLQIRLLVLLRVGAEIADAG*IGCLQI
Trigger: TATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAAT...CTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp AAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCACTCCATCTCGATATTaGGGACGCCGGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: KHRGLHLDIADAGCIGCLTPSRY*GRRLHR
Trigger: CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGT...GAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCTACCCTGGATCTCTCTaGACGGCCTCGGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGYPGSL*TASASP
Trigger: GGGGGAAGCCGAGGCCGTCCAGAGAGATCCAGGGTA...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCTCAGAGGAGAGCGGCTaGAGGCGGACAGACGTCTGC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGSEESG*RRTDVC
Trigger: GCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGA...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR CCA 90 bp CAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTTCAGAGGAGAGCGGCTaGAGGCGGACAGACGTCTGC +
Preference number: 4 (lower is better)
Translates to: QQLLHQLLVKVRFPDDPLSEESG*RRTDVC
Trigger: GCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGA...AAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR CCA 90 bp ACTGCCTGCTCTGTTATGACCACAGTGCCGGGCTCCAGACCTATCCCACCAGAACAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTC +
Preference number: 4 (lower is better)
Translates to: TACSVMTTVPGSRPIPPEQLSLH*LPWPPF
Trigger: GAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTG...TTCTGGTGGGATAGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR CCA 90 bp CAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGAGTCCAAGGTGCACATaGTGTTCCCCACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QIRLLVLLRVGAESPIQTSPRCT*CSPPLW
Trigger: CCACAGTGGTGGGGAACACCATGTGCACCTTGGACT...CGTCTGGATGGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCGGTCCGTTTTCCGGATaGCCCGCTTCCCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGGPFSG*PASPGQ
Trigger: TTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACC...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR TCA 90 bp CCCTTCATAGAAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGGTCCGTTTTCCGGATaGCCCGCTTCCCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: PFIEVQGAHGVPHHCGELGPFSG*PASPGQ
Trigger: TTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACC...GAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTTCTATGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR TCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCTCTGCTGGTACTCGCTaGGCACATTGCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGSAGTR*AHCEGC
Trigger: GCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGA...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR TCA 90 bp CAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTTCTGCTGGTACTCGCTaGGCACATTGCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QQLLHQLLVKVRFPDDPLSAGTR*AHCEGC
Trigger: GCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGA...AAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS-3UTR TCA 90 bp GGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCACGGGCTCCAGACTTGTaGCTTTCAGCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GCIGCLQIRLLVLLRVGARAPDL*LSAFSA
Trigger: TGCAGAGAAAGCTGAAAGTCACAAGTCTGGAGCCCG...TGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp GAAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCACTTTCAGCTTTCTCTaGATTGGCTCCCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: EVQGAHGVPHHCGELAQLTFSFL*IGSRGR
Trigger: GCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGT...GAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp AGGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: RLPPDTPACPSPCRSREPHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...GGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp GGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAACTCGCTCAGCTCTaGAGAACACAGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: GCIGCLQIRLLVLLRVGAELAQL*RTQQQL
Trigger: GAGCTGTTGCTGTGTTCTGCAGAGCTGAGCGAGTTC...TGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCGCCGGCTGCATAGGCTaGCTCCAGATACGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGAGCIG*LQIRLL
Trigger: AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGC...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR GCA 90 bp AAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGACGTGTCGACGAGCTaGGGAGTTCCTCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KSKVHMVFPTTVVNSLSSDVSTS*GVPRFS
Trigger: AGAGAAGCGAGGAACTCCGCAGCTCGTCGACACGTC...AGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000444999.5
ENST00000457596.5
CDS-3UTR CCA 90 bp TTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCCCCAGGACAATCTGCTCATCAGAGGAGAGCGGCTaGAGGCGGACAGACGTCTGC +
Preference number: 4 (lower is better)
Translates to: FLLRSVFRMTRFPRTICSSEESG*RRTDVC
Trigger: GCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGA...TGAGCAGATTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACCTTAACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR CCA 90 bp GAAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCAGTCCAAGGTGCACATaGTGTTCCCCACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: EVQGAHGVPHHCGELAQLSPRCT*CSPPLW
Trigger: CCACAGTGGTGGGGAACACCATGTGCACCTTGGACT...GAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR TCA 90 bp ACCACAGTGCCGGGCTCCAGACCTATCCCACCAGAAGTGCCAATGCGGATGATAGCTCAAACTCTGCCTTaGAGCAGGTATCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: TTVPGSRPIPPEVPMRMIAQTLP*SRYPLP
Trigger: AGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGC...TATCATCCGCATTGGCACTTCTGGTGGGATAGGTCTGGAGCCCGGCACTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR TCA 90 bp TTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCCCCAGGACAATCTGCTCATCCCCACCACTGTGGTaGACTCGCTCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FLLRSVFRMTRFPRTICSSPPLW*TRSALQ
Trigger: CTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGA...TGAGCAGATTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACCTTAACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR GCA 90 bp CTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCCTTGCCCTTCATAGAAGTCCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LRVGAESPIQTALPFIEVHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...GACTTCTATGAAGGGCAAGGCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp ATCCAGACGGCCTTGCCCTTCATAGAAGTCCAAGGTGCACATGGTGTTCCCCACACTCCATCTCGATATTaGGGACGCCGGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: IQTALPFIEVQGAHGVPHTPSRY*GRRLHR
Trigger: CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGT...GTGGGGAACACCATGTGCACCTTGGACTTCTATGAAGGGCAAGGCCGTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCCTGTCTGTCTGGCGGTaGCCCCGCGGCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFLSVWR*PRGWGQ
Trigger: CTGGCCCCAGCCGCGGGGCCACCGCCAGACAGACAG...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCCCCGGTCTGTCTGTCTaGCGGTGGCCCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFPGLSV*RWPRGW
Trigger: CCAGCCGCGGGGCCACCGCCAGACAGACAGACCGGG...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCCAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGQLSLH*LPWPPF
Trigger: GAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTG...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR CCA 90 bp AGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCCACCAAGCCCTGAATTaGGACAGGAGACGAGACGTG +
Preference number: 4 (lower is better)
Translates to: SNSSCTSFLLRSVFRMTRHQALN*DRRRDV
Trigger: CACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTG...GCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000444999.5
ENST00000457596.5
3UTR CAA 72 bp TCTGCAGAACACAGCAACAGCTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGGATGACCCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SAEHSNSSCTSF*LRSVFRMTRFP
Trigger: GGGGAAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp GTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGCAGAACACGAAGCAGGTATCCACTaGCTGCTCTGTTATGACCAC +
Preference number: 4 (lower is better)
Translates to: VHMVFPTTVVNSLSSAEHEAGIH*LLCYDH
Trigger: GTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTC...GTGTTCTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp AAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGAACTCGCTCAGCTCTaGAGAACACAGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: KSKVHMVFPTTVVNSLSSELAQL*RTQQQL
Trigger: GAGCTGTTGCTGTGTTCTGCAGAGCTGAGCGAGTTC...AGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp CACAGTGCCGGGCTCCAGACCTATCCCACCAGAAGTGCCAATGCGGATGATAGTCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: HSAGLQTYPTRSANADDSHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...ACTATCATCCGCATTGGCACTTCTGGTGGGATAGGTCTGGAGCCCGGCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR GCA 90 bp TGCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: CRTQQQLLHQLLVKVRFPIADAG*IGCLQI
Trigger: TATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAAT...CGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCACTCCATCTCGATATTaGGGACGCCGGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: HSNSSCTSFLLRSVFRMTTPSRY*GRRLHR
Trigger: CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGT...GGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTCGGTGGCCCCGCGGCTaGGGCCAGCGGAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNARWPRG*GQRREM
Trigger: CATTTCTCTCCGCTGGCCCCAGCCGCGGGGCCACCG...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp TGCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGCAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTC +
Preference number: 4 (lower is better)
Translates to: CRTQQQLLHQLLVKVRFPQLSLH*LPWPPF
Trigger: GAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTG...CGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR CCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCAGTCCAAGGTGCACATaGTGTTCCCCACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGSPRCT*CSPPLW
Trigger: CCACAGTGGTGGGGAACACCATGTGCACCTTGGACT...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR CCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACACACACCACGGCCGCTTaGAGGCCGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTHTTAA*RPQALH
Trigger: GTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTG...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp GCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGCACCAAGCCCTGAATTaGGACAGGAGACGAGACGTG +
Preference number: 4 (lower is better)
Translates to: AEHSNSSCTSFLLRSVFRHQALN*DRRRDV
Trigger: CACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTG...CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000444999.5
ENST00000457596.5
CDS-3UTR TCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCGAACCACCTGCGAGGTaGATCTCATATGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGEPPAR*ISYGVC
Trigger: GCAGACTCCATATGAGATTCACCTCGCAGGTGGTTC...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR GCA 90 bp AGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: SNSSCTSFLLRSVFRMTRQVSTA*SVMTTV
Trigger: CACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG...GCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp CTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCCTTGCCCTTCATAGAAGTCAATCTGCTCAAACTCTaGCTTGAAGCAGGTATCCAC +
Preference number: 4 (lower is better)
Translates to: LRVGAESPIQTALPFIEVNLLKL*LEAGIH
Trigger: GTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATT...GACTTCTATGAAGGGCAAGGCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp AAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: KSKVHMVFPTTVVNSLSSHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...AGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGGGAGGCCGCAGGCGCTaGACATGGCGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMGGRRR*TWRQTP
Trigger: CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCC...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCGGAGGCCGCAGGCGCTaGACATGGCGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFGGRRR*TWRQTP
Trigger: CGGTGTTTGCCGCCATGTGCAGCGCCTGCGGCCTCC...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCCGCCATTCCGCCAACTaGGGCAGGACCCGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFRHSAN*GRTRQR
Trigger: CCTCTGACGGGTCCTGCCTCAGTTGGCGGAATGGCG...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp CCCACCAGAAGTGCCAATGCGGATGATAGTGACGTTGGAGCACCGGGCATAGTAACGGGGCAATCATTGTaGCTTTCAGCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PTRSANADDSDVGAPGIVTGQSL*LSAFSA
Trigger: TGCAGAGAAAGCTGAAAGTCACAATGATTGCCCCGT...TACTATGCCCGGTGCTCCAACGTCACTATCATCCGCATTGGCACTTCTGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR GCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACGCGCCATCCTCGCACTaGGACACCGGCGACAAACGC +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDAPSSH*DTGDKR
Trigger: GCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGCGC...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACCAAGCCCACTCGGCCTaGGCAGAGAGCCGCTACACC +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDQAHSA*AESRYT
Trigger: GGTGTAGCGGCTCTCTGCGCAGGCCGAGTGGGCTTG...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR GCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCGAAGCAGGTATCCACTaGCTGCTCTGTTATGACCAC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGEAGIH*LLCYDH
Trigger: GTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTC...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR GCA 90 bp GCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGGAAGCAGGTATCCACTaGCTGCTCTGTTATGACCAC +
Preference number: 4 (lower is better)
Translates to: AEHSNSSCTSFLLRSVFREAGIH*LLCYDH
Trigger: GTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTC...CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp CACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCGAAGCAGGTATCCACTaGCTGCTCTGTTATGACCAC +
Preference number: 4 (lower is better)
Translates to: HSNSSCTSFLLRSVFRMTEAGIH*LLCYDH
Trigger: GTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTC...GGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp CAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCCCAATCTGCTCAAACTCTaGCTTGAAGCAGGTATCCAC +
Preference number: 4 (lower is better)
Translates to: QLLHQLLVKVRFPDDPLPNLLKL*LEAGIH
Trigger: GTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATT...GGGAAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp TGCATAGGCTGCCTCCAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAATCTGCTCAAACTCTaGCTTGAAGCAGGTATCCAC +
Preference number: 4 (lower is better)
Translates to: CIGCLQIRLLVLLRVGAENLLKL*LEAGIH
Trigger: GTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATT...CTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTGGAGGCAGCCTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR GCA 90 bp CAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: QQLLHQLLVKVRFPDDPLHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...AAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS-3UTR CCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACGCGTGGAACCAGCCCTaGCCCGGTGGTCGGGAATGT +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDAWNQP*PGGREC
Trigger: ACATTCCCGACCACCGGGCCAGGGCTGGTTCCACGC...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGCACACCACGGCCGCTTaGAGGCCGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLHTTAA*RPQALH
Trigger: GTGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTG...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCGCCGGAGCACTCGAATaGGGGAACCACCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFAGALE*GNHLRG
Trigger: ACCTCGCAGGTGGTTCCCTCATTCGAGTGCTCCGGC...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR TCA 90 bp CAGGTATCCACTGCCTGCTCTGTTATGACCACAGTGCCGGGCTCCAGACCTATCTTGGATTTAAAAGTCTaGCGGGGCAATCATTGTGAC +
Preference number: 4 (lower is better)
Translates to: QVSTACSVMTTVPGSRPILDLKV*RGNHCD
Trigger: GTCACAATGATTGCCCCGTCAGACTTTTAAATCCAA...GATAGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR TCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTCATTGCGAGGGCTGCTaGTCTGGTCCCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNAHCEGC*SGPLPG
Trigger: GCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATG...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACCGGCGACAAACGCAATaGTCCAGGGCCGGACGAAGG +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDRRQTQ*SRAGRR
Trigger: CCTTCGTCCGGCCCTGGAGCATTGCGTTTGTCGCCG...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCGGCGACAAACGCAATaGTCCAGGGCCGGACGAAGG +
Preference number: 4 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMRRQTQ*SRAGRR
Trigger: CCTTCGTCCGGCCCTGGAGCATTGCGTTTGTCGCCG...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAAGCCGCTGCGGCCTCTaGTGGTACTCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTSRCGL*WYSLST
Trigger: TGTGCTCAGCGAGTACCAGCAGAGGCCGCAGCGGCT...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCCAGCCCTGGCCCGGTaGTCGGGAATGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNPALAR*SGMWSW
Trigger: CCAGCTCCACATTCCCGACCACCGGGCCAGGGCTGG...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCCACGTGGTCCTAACCTaGGGCGGAGGAAACCGGGCT +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFHVVLT*GGGNRA
Trigger: AGCCCGGTTTCCTCCGCCCCAGGTTAGGACCACGTG...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACGACAGACGTCTGCAGTaGGAGGCGCTCCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDDRRLQ*EALQAF
Trigger: GAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTC...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTTCAGAGGAGAGCGGCTaGAGGCGGACAGACGTCTGC +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNASEESG*RRTDVC
Trigger: GCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGA...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFLHWLP*PPFRQL
Trigger: CAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAG...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp GCAGGTATCCACTGCCTGCTCTGTTATGACCACAGTGCCGGGCTCCAGACCTATATCTCCAAACAAGGCTaGGAAATTGTGTCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: AGIHCLLCYDHSAGLQTYISKQG*EIVSAS
Trigger: ACTAGCAGACACAATTTCCCAGCCTTGTTTGGAGAT...ATAGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR TCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTGCCAGCGGAGAGAAATaGCAGCGTGGAACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNAASGEK*QRGTSP
Trigger: AGGGCTGGTTCCACGCTGTCATTTCTCTCCGCTGGC...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR TCA 90 bp AGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCCTCATGCAACATGATTaGGATAGAAGGAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: SNSSCTSFLLRSVFRMTRLMQHD*DRRNAH
Trigger: ATGGGCATTCCTTCTATCTCAATCATGTTGCATGAG...GCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR TCA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTGCCTGCTCTGTTATaGCCACAGTGCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMLPALL*PQCRAP
Trigger: TGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAG...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCTCCCCACCACTGTGGTaGACTCGCTCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFSPPLW*TRSALQ
Trigger: CTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGA...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATGGCGGTTCAGGAGGGTaGCACACACCACGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNGGSGG*HTPRPL
Trigger: AAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCC...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACTCTGCTGGTACTCGCTaGGCACATTGCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDSAGTR*AHCEGC
Trigger: GCAGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGA...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGGCGCCATCCTCGCACTaGGACACCGGCGACAAACGC +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLAPSSH*DTGDKR
Trigger: GCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGCGC...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNFQAVS*RRVTRD
Trigger: GTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAA...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGAGGCGGACAGACGTCTaGAGTGGGAGGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLRRTDV*SGRRSR
Trigger: CCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCT...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTGCCGGCTGCATAGGCTaGCTCCAGATACGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNAAGCIG*LQIRLL
Trigger: AAGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGC...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTTGGGCCCACTCGGCCTaGGCAGAGAGCCGCTACACC +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLWAHSA*AESRYT
Trigger: GGTGTAGCGGCTCTCTGCGCAGGCCGAGTGGGCCCA...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395564.9
CDS-3UTR TCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCTTGGATTTAAAAGTCTaGCGGGGCAATCATTGTGAC +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGLDLKV*RGNHCD
Trigger: GTCACAATGATTGCCCCGTCAGACTTTTAAATCCAA...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTGGCGGTTCAGGAGGGTaGCACACACCACGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLGGSGG*HTPRPL
Trigger: AAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCC...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTCACCTCACCAAGCCCTaGATTGGGACAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNAHLTKP*IGTGDE
Trigger: CTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTG...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395564.9
CDS-3UTR GCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATATCTCATATGGAGTCTaGGAGCGGCCCCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNISYGV*ERPRPT
Trigger: CGTGGGGCGGGGCCGCTCGCAGACTCCATATGAGAT...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR GCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTAGGCGGACAGACGTCTaGAGTGGGAGGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLRRTDV*SGRRSR
Trigger: CCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCT...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TGCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGAATCTGCTCAAACTCTaGCTTGAAGCAGGTATCCAC +
Preference number: 4 (lower is better)
Translates to: CRTQQQLLHQLLVKVRFPNLLKL*LEAGIH
Trigger: GTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATT...CGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR GCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFIADAG*IGCLQI
Trigger: TATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAAT...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATAGCCGCTGCGGCCTCTaGTGGTACTCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNSRCGL*WYSLST
Trigger: TGTGCTCAGCGAGTACCAGCAGAGGCCGCAGCGGCT...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGGACGTGTCGACGAGCTaGGGAGTTCCTCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMDVSTS*GVPRFS
Trigger: AGAGAAGCGAGGAACTCCGCAGCTCGTCGACACGTC...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395564.9
CDS-3UTR CCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACACCTGGGGAGTTTCTCTaGGACCTTCCTGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTPGEFL*DLPDPG
Trigger: CCCAGGATCAGGAAGGTCCCAGAGAAACTCCCCAGG...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACACGGTGGTCGGGAATGTaGAGCTGGCACTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTRWSGM*SWHCHC
Trigger: ACAGTGACAGTGCCAGCTCCACATTCCCGACCACCG...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCATCTCCAAACAAGGCTaGGAAATTGTGTCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGISKQG*EIVSAS
Trigger: ACTAGCAGACACAATTTCCCAGCCTTGTTTGGAGAT...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCGGGATAGTCTCTACCTaGGCAGTCAAGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFGIVST*AVKAQL
Trigger: GAGCTGGGCCTTGACTGCCCAGGTAGAGACTATCCC...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCAGGCGCTGCACATaGCGGCAAACACCGAGGACT +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNRRRCT*RQTPRT
Trigger: AGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCG...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGCGCAGGCGCTGCACATaGCGGCAAACACCGAGGACT +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLRRRCT*RQTPRT
Trigger: AGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCG...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATAGTTCCTCGCTTCTCTaGGCCCACTCGGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNSSSLL*AHSACA
Trigger: TGCGCAGGCCGAGTGGGCCCAGAGAAGCGAGGAACT...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395564.9
CDS-3UTR TCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCTGCCTGCTCTGTTATaGCCACAGTGCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNLPALL*PQCRAP
Trigger: TGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAG...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGGGTCCGTTTTCCGGATaGCCCGCTTCCCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLGPFSG*PASPGQ
Trigger: TTGTCCTGGGGAAGCGGGTCATCCGGAAAACGGACC...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCCCCACCACTGTGGTaGACTCGCTCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLSPPLW*TRSALQ
Trigger: CTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGA...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTCATTGCGAGGGCTGCTaGTCTGGTCCCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLHCEGC*SGPLPG
Trigger: GCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATG...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGACTTTCAGCTTTCTCTaGATTGGCTCCCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMTFSFL*IGSRGR
Trigger: GCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGT...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACGTCAAGGCCCAGCTCTaGACCAACGCACCTGATGAA +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDVKAQL*TNAPDE
Trigger: TTCATCAGGTGCGTTGGTGCAGAGCTGGGCCTTGAC...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp GTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCTGCAGAACACAGCTTTATGAGCTCATaGAACATGATTGAGATAGAA +
Preference number: 4 (lower is better)
Translates to: VHMVFPTTVVNSLSSAEHSFMSS*NMIEIE
Trigger: TTCTATCTCAATCATGTTGCATGAGCTCATAAAGCT...GTGTTCTGCAGAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR GCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTACTCCATCTCGATATTaGGGACGCCGGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNATPSRY*GRRLHR
Trigger: CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGT...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAACTCCATCTCGATATTaGGGACGCCGGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTTPSRY*GRRLHR
Trigger: CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGT...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTGACAGACGTCTGCAGTaGGAGGCGCTCCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLDRRLQ*EALQAF
Trigger: GAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTC...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLLHWLP*PPFRQL
Trigger: CAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAG...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAAGTCCAAGGTGCACATaGTGTTCCCCACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTSPRCT*CSPPLW
Trigger: CCACAGTGGTGGGGAACACCATGTGCACCTTGGACT...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTCGAGGGCTGCTGATCTaGTCCCCTTCCAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLRGLLI*SPSRRF
Trigger: GAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCG...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACACACCAAGCCCTGAATTaGGACAGGAGACGAGACGTG +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTHQALN*DRRRDV
Trigger: CACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTG...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395564.9
CDS-3UTR TCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCGCTCAAACTCTGCCTTaGAGCAGGTATCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFAQTLP*SRYPLP
Trigger: AGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGC...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAGCTCAAACTCTGCCTTaGAGCAGGTATCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTAQTLP*SRYPLP
Trigger: AGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGC...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCCTCTTAATCGCGATCTaGTTTTCTAGATTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGLLIAI*FSRFLC
Trigger: ACACAAGAATCTAGAAAATCAGATCGCGATTAAGAG...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCGAACTCGCTCAGCTCTaGAGAACACAGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFELAQL*RTQQQL
Trigger: GAGCTGTTGCTGTGTTCTGCAGAGCTGAGCGAGTTC...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGATTGCGGACGCCGGCTaGATAGGCTGCCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLIADAG*IGCLQI
Trigger: TATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAAT...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACATCGGGAATGTGGAGCTaGCACTGTCACTGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTSGMWS*HCHCVY
Trigger: GTACACACAGTGACAGTGCCAGCTCCACATTCCCGA...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTC +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNQLSLH*LPWPPF
Trigger: GAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTG...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATGGGATAGTCTCTACCTaGGCAGTCAAGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNGIVST*AVKAQL
Trigger: GAGCTGGGCCTTGACTGCCCAGGTAGAGACTATCCC...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACTTCCCGCACAGATGTTaGGATAGTCTCTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDFPHRC*DSLYLG
Trigger: GCCCAGGTAGAGACTATCCCAACATCTGTGCGGGAA...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTTTCCCGCACAGATGTTaGGATAGTCTCTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNAFPHRC*DSLYLG
Trigger: GCCCAGGTAGAGACTATCCCAACATCTGTGCGGGAA...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGACTTTCAGCTTTCTCTaGATTGGCTCCCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLTFSFL*IGSRGR
Trigger: GCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGT...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACACAGGTATCCACTGCCTaGTCTGTTATGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTQVSTA*SVMTTV
Trigger: CACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFQVSTA*SVMTTV
Trigger: CACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAGAAGCAGGTATCCACTaGCTGCTCTGTTATGACCAC +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTEAGIH*LLCYDH
Trigger: GTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTC...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACGAAGCAGGTATCCACTaGCTGCTCTGTTATGACCAC +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDEAGIH*LLCYDH
Trigger: GTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTC...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTCACAGCAACAGCTCCTaGACCAGCTTCTTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNAHSNSS*TSFLLR
Trigger: CCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTG...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATTCACTGTGTGTACCCTaGATCTCTCTGGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNSLCVP*ISLDGL
Trigger: GAGGCCGTCCAGAGAGATCCAGGGTACACACAGTGA...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR CCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTGAGGTGAATCTCATATaGAGTCTGCGAGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLEVNLI*SLRAAP
Trigger: CGGGGCCGCTCGCAGACTCCATATGAGATTCACCTC...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR TCA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGACGGGGCAATCATTGTaGCTTTCAGCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMTGQSL*LSAFSA
Trigger: TGCAGAGAAAGCTGAAAGTCACAATGATTGCCCCGT...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAAATGAGGGAACCACCTaGGAGGTGAATCTCATATGG +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTNEGTT*EVNLIW
Trigger: CCATATGAGATTCACCTCGCAGGTGGTTCCCTCATT...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS-3UTR GCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTGTCAAGGCCCAGCTCTaGACCAACGCACCTGATGAA +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLVKAQL*TNAPDE
Trigger: TTCATCAGGTGCGTTGGTGCAGAGCTGGGCCTTGAC...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATGAACTCGCTCAGCTCTaGAGAACACAGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNELAQL*RTQQQL
Trigger: GAGCTGTTGCTGTGTTCTGCAGAGCTGAGCGAGTTC...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCGTCCTACTTTATACATaGCATAGCGGTCAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFVLLYT*HSGQFP
Trigger: CGGGAACTGACCGCTATGCCATGTATAAAGTAGGAC...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAGTCCTACTTTATACATaGCATAGCGGTCAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTVLLYT*HSGQFP
Trigger: CGGGAACTGACCGCTATGCCATGTATAAAGTAGGAC...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCATAGAAGTCCAAGGTaGACATGGTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNHRSPR*TWCSPP
Trigger: TGGTGGGGAACACCATGTGCACCTTGGACTTCTATG...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
3UTR CAA 72 bp TGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTaGGACAATGCTTTTAATGGCAAGTCATCACAGCAG +
Preference number: 4 (lower is better)
Translates to: CKVCSKSTQQGI*DNAFNGKSSQQ
Trigger: CTGCTGTGATGACTTGCCATTAAAAGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATACGGGGCAATCATTGTaGCTTTCAGCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNTGQSL*LSAFSA
Trigger: TGCAGAGAAAGCTGAAAGTCACAATGATTGCCCCGT...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACATTGGATTTAAAAGTCTaGCGGGGCAATCATTGTGAC +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTLDLKV*RGNHCD
Trigger: GTCACAATGATTGCCCCGTCAGACTTTTAAATCCAA...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTCATGCAACATGATTaGGATAGAAGGAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMLMQHD*DRRNAH
Trigger: ATGGGCATTCCTTCTATCTCAATCATGTTGCATGAG...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR TCA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACACTCATGCAACATGATTaGGATAGAAGGAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTLMQHD*DRRNAH
Trigger: ATGGGCATTCCTTCTATCTCAATCATGTTGCATGAG...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGAATCTGCTCAAACTCTaGCTTGAAGCAGGTATCCAC +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLNLLKL*LEAGIH
Trigger: GTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATT...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATAATCTGCTCAAACTCTaGCTTGAAGCAGGTATCCAC +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNNLLKL*LEAGIH
Trigger: GTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATT...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAGCTTTATGAGCTCATaGAACATGATTGAGATAGAA +
Preference number: 4 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDSFMSS*NMIEIE
Trigger: TTCTATCTCAATCATGTTGCATGAGCTCATAAAGCT...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTTCTTGTGTAAAGTGTaGTCAAAGTCCACACAACAG +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLFLCKV*SKSTQQ
Trigger: CTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATTTCTTGTGTAAAGTGTaGTCAAAGTCCACACAACAG +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNFLCKV*SKSTQQ
Trigger: CTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTATCTCCAAACAAGGCTaGGAAATTGTGTCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: LEETPNQANIIENAPMKLISKQG*EIVSAS
Trigger: ACTAGCAGACACAATTTCCCAGCCTTGTTTGGAGAT...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp TTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGCTAGGAAATTAGTTTCCTaGCACTATTGTCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: FLCKVCSKSTQQGILDNARKLVS*HYCQIS
Trigger: AGAAATCTGACAATAGTGCCAGGAAACTAATTTCCT...AGCATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR GCA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATAGCTTTATGAGCTCATaGAACATGATTGAGATAGAA +
Preference number: 4 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNSFMSS*NMIEIE
Trigger: TTCTATCTCAATCATGTTGCATGAGCTCATAAAGCT...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CCA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGAGGAAATTAGTTTCCTaGCACTATTGTCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLRKLVS*HYCQIS
Trigger: AGAAATCTGACAATAGTGCCAGGAAACTAATTTCCT...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS GCA 90 bp CGGCCGCGCGCCCGCCTCCCCGCGCAGCCGCGCCGGGCCGCTCTCTaGTCCTCTGCAGCTCACAGCCAAGGTGCACCAGAGCCTCCGTCA +
Preference number: 5 (lower is better)
Translates to: RPRARLPAQPRRAAL*SSAAHSQGAPEPPS
Trigger: TGACGGAGGCTCTGGTGCACCTTGGCTGTGAGCTGCAGAGGAGCAGAGAGCGGCCCGGCGCGGCTGCGCGGGGAGGCGGGCGCGCGGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436673.5
CDS GCA 90 bp GCCGCGCCGGGCCGCTCTCTGCTCCTCTGCAGCTCACAGCCAAGGTaGACCAGAGCCTCCGTCACCGCCCCACTCGGCCTGCGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: AAPGRSLLLCSSQPR*TRASVTAPLGLRRE
Trigger: CTCTCTGCGCAGGCCGAGTGGGGCGGTGACGGAGGCTCTGGTGCACCTTGGCTGTGAGCTGCAGAGGAGCAGAGAGCGGCCCGGCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436673.5
CDS GCA 90 bp CGGCCTGCGCAGAGAGCCGCTACACCCGCGGCGCCATCCTCGCACTaGGACACCGGCGACAAACGCAATGCTCCAGGGCCGGACGAAGGG +
Preference number: 5 (lower is better)
Translates to: RPAQRAATPAAPSSH*DTGDKRNAPGPDEG
Trigger: CCCTTCGTCCGGCCCTGGAGCATTGCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGCGCCGCGGGTGTAGCGGCTCTCTGCGCAGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS GCA 90 bp ACCCGCGGCGCCATCCTCGCACTGCGACACCGGCGACAAACGCAATaGTCCAGGGCCGGACGAAGGGACGGCTCTCGGGAGGCTCGCAGA +
Preference number: 5 (lower is better)
Translates to: TRGAILALRHRRQTQ*SRAGRRDGSREARR
Trigger: TCTGCGAGCCTCCCGAGAGCCGTCCCTTCGTCCGGCCCTGGAGCATTGCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGCGCCGCGGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS GCA 90 bp AGGCAGGACCCGTCAGAGGAGAGCGGCTGGAGGCGGACAGACGTCTaGAGTGGGAGGCGCTCCAGGCGTTCCAGGCAGTGTCCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: RQDPSEESGWRRTDV*SGRRSRRSRQCPAG
Trigger: GCCGGCAGGACACTGCCTGGAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGACGGGTCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000416681.5
ENST00000417464.6
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
ENST00000482015.5
CDS CCA 90 bp GGACCCGTCAGAGGAGAGCGGCTGGAGGCGGACAGACGTCTGCAGTaGGAGGCGCTCCAGGCGTTCCAGGCAGTGTCCTGCCGGCGAGTC +
Preference number: 5 (lower is better)
Translates to: GPVRGERLEADRRLQ*EALQAFQAVSCRRV
Trigger: GACTCGCCGGCAGGACACTGCCTGGAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGACGGGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000416681.5
ENST00000417464.6
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
ENST00000482015.5
CDS GCA 90 bp AGACGTCTGCAGTGGGAGGCGCTCCAGGCGTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGACCGCGAGTCACCTCACCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: RRLQWEALQAFQAVS*RRVTRDRESPHQAH
Trigger: GTGGGCTTGGTGAGGTGACTCGCGGTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAACGCCTGGAGCGCCTCCCACTGCAGACGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000417464.6
ENST00000421046.5
ENST00000482015.5
CDS GCA 90 bp AGACGTCTGCAGTGGGAGGCGCTCCAGGCGTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGACCGCGAGTCACCTCACCAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RRLQWEALQAFQAVS*RRVTRDRESPHQAL
Trigger: CAGGGCTTGGTGAGGTGACTCGCGGTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAACGCCTGGAGCGCCTCCCACTGCAGACGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS GCA 90 bp AGACGTCTGCAGTGGGAGGCGCTCCAGGCGTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGACCGCGAGTCACCTCACCAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: RRLQWEALQAFQAVS*RRVTRDRESPHQAP
Trigger: TGGGGCTTGGTGAGGTGACTCGCGGTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAACGCCTGGAGCGCCTCCCACTGCAGACGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416681.5
CDS TCA 90 bp GGGTCTGTGCGCCGGAGCACTCGAATGAGGGAACCACCTGCGAGGTaGATCTCATATGGAGTCTGCGAGCGGCCCCGCCCCACGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GSVRRSTRMREPPAR*ISYGVCERPRPTWS
Trigger: GGACCACGTGGGGCGGGGCCGCTCGCAGACTCCATATGAGATTCACCTCGCAGGTGGTTCCCTCATTCGAGTGCTCCGGCGCACAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS TCA 90 bp GCTCGCAGACGGCGGGGCGCGGGTCTGTGCGCCGGAGCACTCGAATaGGGGAACCACCTGCGAGGTGAATCTCATATGGAGTCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: ARRRRGAGLCAGALE*GNHLRGESHMESAS
Trigger: GCTCGCAGACTCCATATGAGATTCACCTCGCAGGTGGTTCCCTCATTCGAGTGCTCCGGCGCACAGACCCGCGCCCCGCCGTCTGCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS TCA 90 bp CCTGCCGGCGAGTCACCCGCGACCGCGAGTCACCTCACCAAGCCCTaGATTGGGACAGGAGACGAGACGTGTCGACGAGCTGCGGAGTTC +
Preference number: 5 (lower is better)
Translates to: PAGESPATASHLTKP*IGTGDETCRRAAEF
Trigger: GAACTCCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTGACTCGCGGTCGCGGGTGACTCGCCGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS CCA 90 bp CGCGGCTGGGGCCAGCGGAGAGAAATGACAGCGTGGAACCAGCCCTaGCCCGGTGGTCGGGAATGTGGAGCTGGCACTGTCACTGTGTGT +
Preference number: 5 (lower is better)
Translates to: RGWGQRREMTAWNQP*PGGRECGAGTVTVC
Trigger: ACACACAGTGACAGTGCCAGCTCCACATTCCCGACCACCGGGCCAGGGCTGGTTCCACGCTGTCATTTCTCTCCGCTGGCCCCAGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331803.8
ENST00000416681.5
ENST00000432131.5
CDS CCA 90 bp CGGCGAGTCACCCGCGACCGCGAGTCACCTCACCAAGCCCTGAATTaGGACAGGAGACGAGACGTGTCGACGAGCTGCGGAGTTCCTCGC +
Preference number: 5 (lower is better)
Translates to: RRVTRDRESPHQALN*DRRRDVSTSCGVPR
Trigger: GCGAGGAACTCCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTGACTCGCGGTCGCGGGTGACTCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS-3UTR CAA 90 bp TGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGACACACCACGGCCGCTaGGAGGCCGCAGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: WRQTPRTPSRYCGRRLHRTHHGR*EAAGAA
Trigger: TGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGT...CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CAA 90 bp CACATGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCAACACACCACGGCCGCTaGGAGGCCGCAGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: HMAANTEDSISILRTPAATHHGR*EAAGAA
Trigger: TGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGT...TGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS CCA 90 bp GACAGCGTGGAACCAGCCCTGGCCCGGTGGTCGGGAATGTGGAGCTaGCACTGTCACTGTGTGTACCCTGGATCTCTCTGGACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: DSVEPALARWSGMWS*HCHCVYPGSLWTAS
Trigger: CGAGGCCGTCCAGAGAGATCCAGGGTACACACAGTGACAGTGCCAGCTCCACATTCCCGACCACCGGGCCAGGGCTGGTTCCACGCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331803.8
ENST00000416681.5
ENST00000432131.5
CDS-3UTR CAA 90 bp TCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGCAGGCGCCCATCCAGACGGCCTaGCCCTTCATAGAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: SRRFRRVTHTTAAWRPQAPIQTA*PFIEVQ
Trigger: TTGGACTTCTATGAAGGGCAAGGCCGTCTGGATGGG...CGCCTGCGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CAA 90 bp CAGATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGACACACCACGGCCGCTaGGAGGCCGCAGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: QIRLLVLLRVGAESPIQTTHHGR*EAAGAA
Trigger: TGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGT...CGTCTGGATGGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS GCA 90 bp CACCAAGCCCTGAATTGGGACAGGAGACGAGACGTGTCGACGAGCTaGGGAGTTCCTCGCTTCTCTGGGCCCACTCGGCCTGCGCAGAGA +
Preference number: 5 (lower is better)
Translates to: HQALNWDRRRDVSTS*GVPRFSGPTRPAQR
Trigger: TCTCTGCGCAGGCCGAGTGGGCCCAGAGAAGCGAGGAACTCCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000444999.5
ENST00000457596.5
CDS GCA 90 bp CACCAAGCCCTGAATTGGGACAGGAGACGAGACGTGTCGACGAGCTaGGGAGTTCCTCGCTTCTCTGGGCCCTCGCTCCGCACACACCAG +
Preference number: 5 (lower is better)
Translates to: HQALNWDRRRDVSTS*GVPRFSGPSLRTHQ
Trigger: CTGGTGTGTGCGGAGCGAGGGCCCAGAGAAGCGAGGAACTCCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436673.5
CDS CCA 90 bp GGGCCAGCGGAGAGAAATGACAGCGTGGAACCAGCCCTGGCCCGGTaGTCGGGAATGTGGAGCTGGCACTGTCACTGTGTGTACCCTGGA +
Preference number: 5 (lower is better)
Translates to: GPAERNDSVEPALAR*SGMWSWHCHCVYPG
Trigger: TCCAGGGTACACACAGTGACAGTGCCAGCTCCACATTCCCGACCACCGGGCCAGGGCTGGTTCCACGCTGTCATTTCTCTCCGCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331803.8
ENST00000416681.5
ENST00000432131.5
CDS TCA 90 bp GCAGCTTCTCCCAGCACTGGGGCTGGAGCTAGAGGAGAGCTTGGCTaGTGCCTTGGTGAACCCACAGGGCCTGGAGTGGTCAAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: AASPSTGAGARGELG*CLGEPTGPGVVKPL
Trigger: AAGGGGCTTGACCACTCCAGGCCCTGTGGGTTCACCAAGGCATCAGCCAAGCTCTCCTCTAGCTCCAGCCCCAGTGCTGGGAGAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS-3UTR CAA 90 bp TCCCCTTCCAGGCGGTTCAGGAGGGTGACACACACCACGGCCGCTTGGAGGCCGTGCTCAAACTCTGCCTaGAAGCAGGTATCCACTGCC +
Preference number: 5 (lower is better)
Translates to: SPSRRFRRVTHTTAAWRPCSNSA*KQVSTA
Trigger: GGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA...CGGCCTCCAAGCGGCCGTGGTGTGTGTCACCCTCCTGAACCGCCTGGAAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CAA 90 bp GCTCACCAGCCGCTGCGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGCTGGCAGCGCTCAGGCCTaGCTCAGTTTCTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: AHQPLRPLLVLAEHIARAGSAQA*LSFFLM
Trigger: CATCAAGAAGAAACTGAGCAAGGCCTGAGCGCTGCC...AGCCCTCGCAATGTGCTCAGCGAGTACCAGCAGAGGCCGCAGCGGCTGGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS GCA 90 bp CAGCATCACTCACATTGGGACGCACAGGCCCCCTCCAGTGTCAGCTaGCATCTTCACCATGTCCCCCTGCACCTTCCTAGGAGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: QHHSHWDAQAPSSVS*HLHHVPLHLPRSAW
Trigger: CCAGGCACTCCTAGGAAGGTGCAGGGGGACATGGTGAAGATGGCAGCTGACACTGGAGGGGGCCTGTGCGTCCCAATGTGAGTGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 90 bp GGGCTCCAGACTTGTGACTTTCAGCTTTCTCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTGAGGCAGGACCCGTCAGAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GLQTCDFQLSLHWLP*PPFRQLRQDPSEES
Trigger: GCTCTCCTCTGACGGGTCCTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAAGTCTGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS CCA 90 bp CACAGTGCCGGGCTCCAGACTTGTGACTTTCAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTCCGCCAACTGAGGCAGGACCCGTCA +
Preference number: 5 (lower is better)
Translates to: HSAGLQTCDFQLSLH*LPWPPFRQLRQDPS
Trigger: TGACGGGTCCTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAAGTCTGGAGCCCGGCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CAA 90 bp GCACATGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCTCAGCTTTCTCTGCATaGGCTCCCGTGGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: AHGGKHRGLHLDIADAGCSAFSA*APVAAI
Trigger: AATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGA...GCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS GCA 90 bp CACAGGCCCCCTCCAGTGTCAGCTGCCATCTTCACCATGTCCCCCTaGACCTTCCTAGGAGTGCCTGGGACTCTTGTTCTCAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: HRPPPVSAAIFTMSP*TFLGVPGTLVLRSV
Trigger: GACAGACCTGAGAACAAGAGTCCCAGGCACTCCTAGGAAGGTGCAGGGGGACATGGTGAAGATGGCAGCTGACACTGGAGGGGGCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 90 bp AGAAATGACAGCGTGGAACCAGCCCTGGCCCGGTGGTCGGGAATGTaGAGCTGGCACTGTCACTGTGTGTACCCTGGATCTCTCTGGACG +
Preference number: 5 (lower is better)
Translates to: RNDSVEPALARWSGM*SWHCHCVYPGSLWT
Trigger: CGTCCAGAGAGATCCAGGGTACACACAGTGACAGTGCCAGCTCCACATTCCCGACCACCGGGCCAGGGCTGGTTCCACGCTGTCATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331803.8
ENST00000416681.5
ENST00000432131.5
CDS CCA 90 bp CGGGGCAATCATTGTGACTTTCAGCTTTCTCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTGAGGCAGGACCCGTCAGAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: RGNHCDFQLSLHWLP*PPFRQLRQDPSEES
Trigger: GCTCTCCTCTGACGGGTCCTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAATGATTGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331803.8
ENST00000395564.9
ENST00000416681.5
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
CDS-3UTR CAA 90 bp GATACGCCTGCTTGTCCTTCTCCGTGTAGGAGCAGAGAGCCCCATCCAGACGGCTCAGCTTTCTCTGCATaGGCTCCCGTGGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: DTPACPSPCRSREPHPDGSAFSA*APVAAI
Trigger: AATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGA...GCCGTCTGGATGGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGCGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CAA 90 bp TGGCGGCAAACACCGAGGACTCCATCTCGATATTGCGGACGCCGGCTGCATAGGTCAGCTTTCTCTGCATaGGCTCCCGTGGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: WRQTPRTPSRYCGRRLHRSAFSA*APVAAI
Trigger: AATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGA...CCTATGCAGCCGGCGTCCGCAATATCGAGATGGAGTCCTCGGTGTTTGCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS CCA 90 bp GGCATAGCGGTCAGTTCCCGCACAGATGTTGGGATAGTCTCTACCTaGGCAGTCAAGGCCCAGCTCTGCACCAACGCACCTGATGAAGGC +
Preference number: 5 (lower is better)
Translates to: GIAVSSRTDVGIVST*AVKAQLCTNAPDEG
Trigger: GCCTTCATCAGGTGCGTTGGTGCAGAGCTGGGCCTTGACTGCCCAGGTAGAGACTATCCCAACATCTGTGCGGGAACTGACCGCTATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331803.8
ENST00000395564.9
ENST00000416681.5
ENST00000421046.5
ENST00000436673.5
CDS-3UTR CAA 90 bp AGCACATTGCGAGGGCTGCTGATCTGGTCCCCTTCCAGGCGGTTCAGGAGGGTGTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: STLRGLLIWSPSRRFRRVSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...CACCCTCCTGAACCGCCTGGAAGGGGACCAGATCAGCAGCCCTCGCAATGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS GCA 90 bp ACAGATGTTGGGATAGTCTCTACCTGGGCAGTCAAGGCCCAGCTCTaGACCAACGCACCTGATGAAGGCTTTCATCCGGGAGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TDVGIVSTWAVKAQL*TNAPDEGFHPGGAS
Trigger: GGAAGCCCCTCCCGGATGAAAGCCTTCATCAGGTGCGTTGGTGCAGAGCTGGGCCTTGACTGCCCAGGTAGAGACTATCCCAACATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331803.8
ENST00000395564.9
ENST00000416681.5
ENST00000421046.5
ENST00000436673.5
CDS CCA 90 bp AGAGTTCCTGGCAGAGGCCAGCATGCTATGCACAGCTGTGTCAGGTaGGCAGCATCGGAGACTAAGCTTGCAGGACCGAGACAGCTCATG +
Preference number: 5 (lower is better)
Translates to: RVPGRGQHAMHSCVR*AASETKLAGPRQLM
Trigger: CATGAGCTGTCTCGGTCCTGCAAGCTTAGTCTCCGATGCTGCCCACCTGACACAGCTGTGCATAGCATGCTGGCCTCTGCCAGGAACTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 90 bp GAGGAGAGCTTGGCTGATGCCTTGGTGAACCCACAGGGCCTGGAGTaGTCAAGCCCCTTGGAATTCCAGCATCACTCACATTGGGACGCA +
Preference number: 5 (lower is better)
Translates to: EESLADALVNPQGLE*SSPLEFQHHSHWDA
Trigger: TGCGTCCCAATGTGAGTGATGCTGGAATTCCAAGGGGCTTGACCACTCCAGGCCCTGTGGGTTCACCAAGGCATCAGCCAAGCTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS-3UTR CAA 90 bp CCATCTCGATATTGCGGACGCCGGCTGCATAGGCTGCCTCCAGATACGCCTGCTTGCTCAAACTCTGCCTaGAAGCAGGTATCCACTGCC +
Preference number: 5 (lower is better)
Translates to: PSRYCGRRLHRLPPDTPACSNSA*KQVSTA
Trigger: GGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA...AGCAGGCGTATCTGGAGGCAGCCTATGCAGCCGGCGTCCGCAATATCGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS CCA 90 bp ACACACACAAATTGTGACTTTCAGCTTTCTCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTGAGGCAGGACCCGTCAGAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: THTNCDFQLSLHWLP*PPFRQLRQDPSEES
Trigger: GCTCTCCTCTGACGGGTCCTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAATTTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482015.5
CDS-3UTR CAA 90 bp GGAGCAGAGAGCCCCATCCAGACGGCCTTGCCCTTCATAGAAGTCCAAGGTGCATGCTCAAACTCTGCCTaGAAGCAGGTATCCACTGCC +
Preference number: 5 (lower is better)
Translates to: GAESPIQTALPFIEVQGACSNSA*KQVSTA
Trigger: GGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA...TGCACCTTGGACTTCTATGAAGGGCAAGGCCGTCTGGATGGGGCTCTCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CAA 90 bp CAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGATGACCCGCTTCCCCCCATCCAGACGGCCTaGCCCTTCATAGAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: QLLHQLLVKVRFPDDPLPPIQTA*PFIEVQ
Trigger: TTGGACTTCTATGAAGGGCAAGGCCGTCTGGATGGG...GGGAAGCGGGTCATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS-3UTR CAA 90 bp GAAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTCAGCTCGGCAGCGCTCAGGCCTaGCTCAGTTTCTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: EVQGAHGVPHHCGELAQLGSAQA*LSFFLM
Trigger: CATCAAGAAGAAACTGAGCAAGGCCTGAGCGCTGCC...GAGCTGAGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395560.7
ENST00000417464.6
CDS CCA 90 bp CTTCCACCAACACACACAAATTGTGACTTTCAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTCCGCCAACTGAGGCAGGACCCGTCA +
Preference number: 5 (lower is better)
Translates to: LPPTHTNCDFQLSLH*LPWPPFRQLRQDPS
Trigger: TGACGGGTCCTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAATTTGTGTGTGTTGGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482015.5
CDS-3UTR CAA 90 bp GCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGGTCAGCTTTCTCTGCATaGGCTCCCGTGGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: AEHSNSSCTSFLLRSVFRSAFSA*APVAAI
Trigger: AATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGA...CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS-3UTR CAA 90 bp CAGGTATCCACTGCCTGCTCTGTTATGACCACAGTGCCGGGCTCCAGACCTATCTGCTCAAACTCTGCCTaGAAGCAGGTATCCACTGCC +
Preference number: 5 (lower is better)
Translates to: QVSTACSVMTTVPGSRPICSNSA*KQVSTA
Trigger: GGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA...GATAGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS GCA 90 bp AGGACAATCTGCTCAAACTCTGCCTTGAAGCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTGCCGGGCTCCAGACCTGATGAAGGC +
Preference number: 5 (lower is better)
Translates to: RTICSNSALKQVSTA*SVMTTVPGSRPDEG
Trigger: GCCTTCATCAGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482015.5
CDS GCA 90 bp CTCAAGAACCATTCACTAGAGTTCCTGGCAGAGGCCAGCATGCTATaGACAGCTGTGTCAGGTGGGCAGCATCGGAGACTAAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LKNHSLEFLAEASML*TAVSGGQHRRLSLQ
Trigger: CTGCAAGCTTAGTCTCCGATGCTGCCCACCTGACACAGCTGTGCATAGCATGCTGGCCTCTGCCAGGAACTCTAGTGAATGGTTCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 90 bp GGTGGGCAGCATCGGAGACTAAGCTTGCAGGACCGAGACAGCTCATaGCCGTTGGTGTGTTGTCCTAGGGACAATTTCGCTAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: GGQHRRLSLQDRDSS*PLVCCPRDNFAKLG
Trigger: TCCAAGTTTAGCGAAATTGTCCCTAGGACAACACACCAACGGCCATGAGCTGTCTCGGTCCTGCAAGCTTAGTCTCCGATGCTGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS-3UTR CAA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCACACACCACGGCCGCTaGGAGGCCGCAGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFTHHGR*EAAGAA
Trigger: TGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGT...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGACACACCACGGCCGCTaGGAGGCCGCAGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMTHHGR*EAAGAA
Trigger: TGCAGCGCCTGCGGCCTCCAAGCGGCCGTGGTGTGT...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCGGCAGCGCTCAGGCCTaGCTCAGTTTCTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGGSAQA*LSFFLM
Trigger: CATCAAGAAGAAACTGAGCAAGGCCTGAGCGCTGCC...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS TCA 90 bp CTAACCCTAAATGTGATGGTTTCAGGCAGCAGGGCCTTTGGGAGGTaGTTAGGTCATGAGGGTGGAGCCTGCATGAGTGGGATTAGTGCC +
Preference number: 5 (lower is better)
Translates to: LTLNVMVSGSRAFGR*LGHEGGACMSGISA
Trigger: GGCACTAATCCCACTCATGCAGGCTCCACCCTCATGACCTAATCACCTCCCAAAGGCCCTGCTGCCTGAAACCATCACATTTAGGGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS GCA 90 bp TTGTTCTCAGGTCTGTCCATCGCCTTGAGCTTCCCCCTGAGCAGCTaGCAACACAACCAGATCCTGAGGCTTTTTGTCTCCACCCATTCA +
Preference number: 5 (lower is better)
Translates to: LFSGLSIALSFPLSS*QHNQILRLFVSTHS
Trigger: TGAATGGGTGGAGACAAAAAGCCTCAGGATCTGGTTGTGTTGGCAGCTGCTCAGGGGGAAGCTCAAGGCGATGGACAGACCTGAGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS-3UTR CAA 90 bp TGGACAATGCTTTTAATGGCAAGTCATCACAGCAGGTCTGCGGAGGTGCAGGGCTGCTCAAACTCTGCCTaGAAGCAGGTATCCACTGCC +
Preference number: 5 (lower is better)
Translates to: WTMLLMASHHSRSAEVQGCSNSA*KQVSTA
Trigger: GGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA...GCCCTGCACCTCCGCAGACCTGCTGTGATGACTTGCCATTAAAAGCATTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000417464.6
CDS GCA 90 bp AGGACAATCTGCTCAAACTCTGCCTTGAAGCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTGCCGGGCTCCAGACTTGTGACTTTC +
Preference number: 5 (lower is better)
Translates to: RTICSNSALKQVSTA*SVMTTVPGSRLVTF
Trigger: GAAAGTCACAAGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS GCA 90 bp AGGACAATCTGCTCAAACTCTGCCTTGAAGCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTGCCGGGCTCCAGACCTGAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: RTICSNSALKQVSTA*SVMTTVPGSRPEEK
Trigger: TTTTTCCTCAGGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS-3UTR CAA 90 bp TGCAGAACACAGCAACAGCTCCTGCACCAGCTTCTTGTTAAGGTCCGTTTTCCGTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: CRTQQQLLHQLLVKVRFPSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...CGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCTGTTGCTGTGTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000444999.5
ENST00000457596.5
CDS TCA 90 bp ACATGGCCGATTGCAAAGACCTTTGCTTCGCTCCCCACATGTATCTaGACTCCTCTTTCCATTGCTACTCCTGCGGCTGTTCTGGGCAAT +
Preference number: 5 (lower is better)
Translates to: TWPIAKTFASLPTCI*TPLSIATPAAVLGN
Trigger: ATTGCCCAGAACAGCCGCAGGAGTAGCAATGGAAAGAGGAGTTCAGATACATGTGGGGAGCGAAGCAAAGGTCTTTGCAATCGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS-3UTR CAA 90 bp AGGACAATCTGCTCAAACTCTGCCTTGAAGCAGGTATCCACTGCCTGCTCTGTTTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: RTICSNSALKQVSTACSVSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...AACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCAGATTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS TCA 90 bp GCACCGGGCATAGTACAGCAGCTTTATGAGCTCATGCAACATGATTaGGATAGAAGGAATGCCCATACCATGACTGACAGACAGCACCGG +
Preference number: 5 (lower is better)
Translates to: APGIVQQLYELMQHD*DRRNAHTMTDRQHR
Trigger: CCGGTGCTGTCTGTCAGTCATGGTATGGGCATTCCTTCTATCTCAATCATGTTGCATGAGCTCATAAAGCTGCTGTACTATGCCCGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331803.8
ENST00000395564.9
ENST00000416681.5
ENST00000421046.5
ENST00000436673.5
CDS TCA 90 bp GTGAGCTATGACCAACTCCTGACCTACCTGGCCTTCCTCTCAGATTaGTGCATTATTAGGGTCCAGTTTCTATGTTCTGGGCGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VSYDQLLTYLAFLSD*CIIRVQFLCSGRAF
Trigger: GAAGGCACGCCCAGAACATAGAAACTGGACCCTAATAATGCATCAATCTGAGAGGAAGGCCAGGTAGGTCAGGAGTTGGTCATAGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS-3UTR CAA 90 bp TTCATAGAAGTCCAAGGTGCACATGGTGTTCCCCACCACTGTGGTGAACTCGCTAACAAGGCTGGGAAATaGTGTCTGCTAGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: FIEVQGAHGVPHHCGELANKAGK*CLLVVR
Trigger: TCTCACCACTAGCAGACACAATTTCCCAGCCTTGTT...AGCGAGTTCACCACAGTGGTGGGGAACACCATGTGCACCTTGGACTTCTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS-3UTR CAA 90 bp TCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATCGCGATCTGATTTTCCCCATCCAGACGGCCTaGCCCTTCATAGAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: SPMRLIQDSLSLNRDLIFPIQTA*PFIEVQ
Trigger: TTGGACTTCTATGAAGGGCAAGGCCGTCTGGATGGG...GAAAATCAGATCGCGATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS TCA 90 bp GCACCGGGCATAGTACAGCAGCTTTATGAGCTCATGCAACATGATTaGGATAGAAGGAATGCCCATACCATGCTGATGAAGGCTTTCATC +
Preference number: 5 (lower is better)
Translates to: APGIVQQLYELMQHD*DRRNAHTMLMKAFI
Trigger: GATGAAAGCCTTCATCAGCATGGTATGGGCATTCCTTCTATCTCAATCATGTTGCATGAGCTCATAAAGCTGCTGTACTATGCCCGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS CCA 90 bp AATAAAATTAAAGCAGGGCAGCCAGGGAGCACACAGCAGAGCATATaGAAGAAAGAAGCAGATCCACCCACACATCCAAACACGAAGCAT +
Preference number: 5 (lower is better)
Translates to: NKIKAGQPGSTQQSI*KKEADPPTHPNTKH
Trigger: ATGCTTCGTGTTTGGATGTGTGGGTGGATCTGCTTCTTTCTTCCATATGCTCTGCTGTGTGCTCCCTGGCTGCCCTGCTTTAATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS-3UTR CAA 90 bp TCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGTCTCTTAATTCAGCTTTCTCTGCATaGGCTCCCGTGGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: SKGRTSPMRLIQDSLSLNSAFSA*APVAAI
Trigger: AATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGA...ATTAAGAGACAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACATGCTCAAACTCTGCCTaGAAGCAGGTATCCACTGCC +
Preference number: 5 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTCSNSA*KQVSTA
Trigger: GGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACATCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGCCCATCCAGACGGCCTaGCCCTTCATAGAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLPIQTA*PFIEVQ
Trigger: TTGGACTTCTATGAAGGGCAAGGCCGTCTGGATGGG...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp GATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAATGAACAAGGCTGGGAAATaGTGTCTGCTAGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: DSCVKCAQSPHNRGFWTMNKAGK*CLLVVR
Trigger: TCTCACCACTAGCAGACACAATTTCCCAGCCTTGTT...CATTGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTGGCAGCGCTCAGGCCTaGCTCAGTTTCTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: LEETPNQANIIENAPMKLGSAQA*LSFFLM
Trigger: CATCAAGAAGAAACTGAGCAAGGCCTGAGCGCTGCC...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp CTTGAAGAAACCCCAAATCAGGCTAACATCATTGAAAATGCTCCAATGAAACTTTCCTGCACCAGCTTCTaGTTAAGGTCCGTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: LEETPNQANIIENAPMKLSCTSF*LRSVFR
Trigger: CCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGA...AAGTTTCATTGGAGCATTTTCAATGATGTTAGCCTGATTTGGGGTTTCTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGAACAAGGCTGGGAAATaGTGTCTGCTAGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLNKAGK*CLLVVR
Trigger: TCTCACCACTAGCAGACACAATTTCCCAGCCTTGTT...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACACACAACAGGGGATTTaGGACAATGCTTTTAATGGC +
Preference number: 5 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDTQQGI*DNAFNG
Trigger: GCCATTAAAAGCATTGTCCAAAATCCCCTGTTGTGT...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp AATGAAACTTCAAAAGGAAGAACATCTCCCATGCGGTTAATCCAAGATTCTCTGACACAACAGGGGATTTaGGACAATGCTTTTAATGGC +
Preference number: 5 (lower is better)
Translates to: NETSKGRTSPMRLIQDSLTQQGI*DNAFNG
Trigger: GCCATTAAAAGCATTGTCCAAAATCCCCTGTTGTGT...CAGAGAATCTTGGATTAACCGCATGGGAGATGTTCTTCCTTTTGAAGTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp CTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAAGTTTCCTGGCACTATaGTCAGATTTCTTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: LDSCVKCAQSPHNRGFWTSFLAL*SDFLFS
Trigger: ACTAAACAAGAAATCTGACAATAGTGCCAGGAAACT...TGTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS-3UTR CAA 90 bp TCTAGATTCTTGTGTAAAGTGTGCTCAAAGTCCACACAACAGGGGATTTTGGACAGTTTCCTGGCACTATaGTCAGATTTCTTGTTTAGT +
Preference number: 5 (lower is better)
Translates to: SRFLCKVCSKSTQQGILDSFLAL*SDFLFS
Trigger: ACTAAACAAGAAATCTGACAATAGTGCCAGGAAACT...GTCCAAAATCCCCTGTTGTGTGGACTTTGAGCACACTTTACACAAGAATCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000395564.9
CDS GCA 72 bp CCCCGCGCAGCCGCGCCGGGCCGCTCTCTGCTCCTCTaGAGCTCACAGCCAAGGTGCACCAGAGCCTCCGTC +
Preference number: 6 (lower is better)
Translates to: PRAAAPGRSLLL*SSQPRCTRASV
Trigger: GACGGAGGCTCTGGTGCACCTTGGCTGTGAGCTGCAGAGGAGCAGAGAGCGGCCCGGCGCGGCTGCGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436673.5
CDS GCA 72 bp CAGTGGGAGGCGCTCCAGGCGTTCCAGGCAGTGTCCTaGCGGCGAGTCACCCGCGACCGCGAGTCACCTCAC +
Preference number: 6 (lower is better)
Translates to: QWEALQAFQAVS*RRVTRDRESPH
Trigger: GTGAGGTGACTCGCGGTCGCGGGTGACTCGCCGGCAGGACACTGCCTGGAACGCCTGGAGCGCCTCCCACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000416681.5
ENST00000417464.6
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
ENST00000482015.5
CDS GCA 72 bp CAGAGAGCCGCTACACCCGCGGCGCCATCCTCGCACTaGGACACCGGCGACAAACGCAATGCTCCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: QRAATPAAPSSH*DTGDKRNAPGP
Trigger: CGGCCCTGGAGCATTGCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGCGCCGCGGGTGTAGCGGCTCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS GCA 72 bp GGCCGCTCTCTGCTCCTCTGCAGCTCACAGCCAAGGTaGACCAGAGCCTCCGTCACCGCCCCACTCGGCCTG +
Preference number: 6 (lower is better)
Translates to: GRSLLLCSSQPR*TRASVTAPLGL
Trigger: CAGGCCGAGTGGGGCGGTGACGGAGGCTCTGGTGCACCTTGGCTGTGAGCTGCAGAGGAGCAGAGAGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436673.5
CDS CCA 72 bp AGTCTGCGAGCGGCCCCGCCCCACGTGGTCCTAACCTaGGGCGGAGGAAACCGGGCTAGAAGCGGCTCTAGG +
Preference number: 6 (lower is better)
Translates to: SLRAAPPHVVLT*GGGNRARSGSR
Trigger: CCTAGAGCCGCTTCTAGCCCGGTTTCCTCCGCCCCAGGTTAGGACCACGTGGGGCGGGGCCGCTCGCAGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS GCA 72 bp GCCATCCTCGCACTGCGACACCGGCGACAAACGCAATaGTCCAGGGCCGGACGAAGGGACGGCTCTCGGGAG +
Preference number: 6 (lower is better)
Translates to: AILALRHRRQTQ*SRAGRRDGSRE
Trigger: CTCCCGAGAGCCGTCCCTTCGTCCGGCCCTGGAGCATTGCGTTTGTCGCCGGTGTCGCAGTGCGAGGATGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS GCA 72 bp CCGTCAGAGGAGAGCGGCTGGAGGCGGACAGACGTCTaGAGTGGGAGGCGCTCCAGGCGTTCCAGGCAGTGT +
Preference number: 6 (lower is better)
Translates to: PSEESGWRRTDV*SGRRSRRSRQC
Trigger: ACACTGCCTGGAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCTGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000416681.5
ENST00000417464.6
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
ENST00000482015.5
CDS CCA 72 bp AGAGGAGAGCGGCTGGAGGCGGACAGACGTCTGCAGTaGGAGGCGCTCCAGGCGTTCCAGGCAGTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: RGERLEADRRLQ*EALQAFQAVSC
Trigger: GCAGGACACTGCCTGGAACGCCTGGAGCGCCTCCCACTGCAGACGTCTGTCCGCCTCCAGCCGCTCTCCTCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000331803.8
ENST00000395560.7
ENST00000395564.9
ENST00000416681.5
ENST00000417464.6
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
ENST00000482015.5
CDS CAA 90 bp CCGGCGAGTCACCCGCGACCGCGAGTCACCTCACCAAGCCCTGAATaGGGACAGGAGACGAGACGTGTCGACGAGCTGCGGAGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: PASHPRPRVTSPSPE*GQETRRVDELRSSS
Trigger: CGAGGAACTCCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTGACTCGCGGTCGCGGGTGACTCGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS TCA 72 bp CGCCGGAGCACTCGAATGAGGGAACCACCTGCGAGGTaGATCTCATATGGAGTCTGCGAGCGGCCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: RRSTRMREPPAR*ISYGVCERPRP
Trigger: GGGGCGGGGCCGCTCGCAGACTCCATATGAGATTCACCTCGCAGGTGGTTCCCTCATTCGAGTGCTCCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS TCA 72 bp CGGCGGGGCGCGGGTCTGTGCGCCGGAGCACTCGAATaGGGGAACCACCTGCGAGGTGAATCTCATATGGAG +
Preference number: 6 (lower is better)
Translates to: RRGAGLCAGALE*GNHLRGESHME
Trigger: CTCCATATGAGATTCACCTCGCAGGTGGTTCCCTCATTCGAGTGCTCCGGCGCACAGACCCGCGCCCCGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331803.8
ENST00000421046.5
CDS CCA 72 bp GCGAGTCACCTCACCAAGCCCCACGTGGTCCTAACCTaGGGCGGAGGAAACCGGGCTAGAAGCGGCTCTAGG +
Preference number: 6 (lower is better)
Translates to: ASHLTKPHVVLT*GGGNRARSGSR
Trigger: CCTAGAGCCGCTTCTAGCCCGGTTTCCTCCGCCCCAGGTTAGGACCACGTGGGGCTTGGTGAGGTGACTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416681.5
CDS CAA 72 bp CACCCGCGACCGCGAGTCACCTCACCAAGCCCTGAATaGGGACAGGAGACGAGACGTGTCGACGAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: HPRPRVTSPSPE*GQETRRVDELR
Trigger: CCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTGACTCGCGGTCGCGGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS TCA 72 bp CCCAGCACTGGGGCTGGAGCTAGAGGAGAGCTTGGCTaGTGCCTTGGTGAACCCACAGGGCCTGGAGTGGTC +
Preference number: 6 (lower is better)
Translates to: PSTGAGARGELG*CLGEPTGPGVV
Trigger: GACCACTCCAGGCCCTGTGGGTTCACCAAGGCATCAGCCAAGCTCTCCTCTAGCTCCAGCCCCAGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS GCA 72 bp CTGAATTGGGACAGGAGACGAGACGTGTCGACGAGCTaGGGAGTTCCTCGCTTCTCTGGGCCCTCGCTCCGC +
Preference number: 6 (lower is better)
Translates to: LNWDRRRDVSTS*GVPRFSGPSLR
Trigger: GCGGAGCGAGGGCCCAGAGAAGCGAGGAACTCCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436673.5
CDS CCA 72 bp ACCCGCGACCGCGAGTCACCTCACCAAGCCCTGAATTaGGACAGGAGACGAGACGTGTCGACGAGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: TRDRESPHQALN*DRRRDVSTSCG
Trigger: TCCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTGACTCGCGGTCGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS TCA 72 bp GAGTCACCCGCGACCGCGAGTCACCTCACCAAGCCCTaGATTGGGACAGGAGACGAGACGTGTCGACGAGCT +
Preference number: 6 (lower is better)
Translates to: ESPATASHLTKP*IGTGDETCRRA
Trigger: AGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAGGGCTTGGTGAGGTGACTCGCGGTCGCGGGTGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
ENST00000457596.5
CDS GCA 72 bp CTGAATTGGGACAGGAGACGAGACGTGTCGACGAGCTaGGGAGTTCCTCGCTTCTCTGGGCCCACTCGGCCT +
Preference number: 6 (lower is better)
Translates to: LNWDRRRDVSTS*GVPRFSGPTRP
Trigger: AGGCCGAGTGGGCCCAGAGAAGCGAGGAACTCCGCAGCTCGTCGACACGTCTCGTCTCCTGTCCCAATTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395560.7
ENST00000395564.9
ENST00000432131.5
ENST00000444999.5
ENST00000457596.5
CDS CCA 72 bp GAACCAGCCCTGGCCCGGTGGTCGGGAATGTGGAGCTaGCACTGTCACTGTGTGTACCCTGGATCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: EPALARWSGMWS*HCHCVYPGSLW
Trigger: CCAGAGAGATCCAGGGTACACACAGTGACAGTGCCAGCTCCACATTCCCGACCACCGGGCCAGGGCTGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331803.8
ENST00000416681.5
ENST00000432131.5
CDS CAA 90 bp GCTGATGCCTTGGTGAACCCACAGGGCCTGGAGTGGTCAAGCCCCTaGGAATTCCAGCATCACTCACATTGGGACGCACAGGCCCCCTCC +
Preference number: 6 (lower is better)
Translates to: ADALVNPQGLEWSSP*EFQHHSHWDAQAPS
Trigger: GGAGGGGGCCTGTGCGTCCCAATGTGAGTGATGCTGGAATTCCAAGGGGCTTGACCACTCCAGGCCCTGTGGGTTCACCAAGGCATCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS GCA 72 bp GTCTGTGCGCCGGAGCACTCGAATGAGGGAACCACCTaGGAGGTGAATCTCATATGGAGTCTGCGAGCGGCC +
Preference number: 6 (lower is better)
Translates to: VCAPEHSNEGTT*EVNLIWSLRAA
Trigger: GGCCGCTCGCAGACTCCATATGAGATTCACCTCGCAGGTGGTTCCCTCATTCGAGTGCTCCGGCGCACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS GCA 72 bp TCACATTGGGACGCACAGGCCCCCTCCAGTGTCAGCTaGCATCTTCACCATGTCCCCCTGCACCTTCCTAGG +
Preference number: 6 (lower is better)
Translates to: SHWDAQAPSSVS*HLHHVPLHLPR
Trigger: CCTAGGAAGGTGCAGGGGGACATGGTGAAGATGGCAGCTGACACTGGAGGGGGCCTGTGCGTCCCAATGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 72 bp GAGAGAAATGACAGCGTGGAACCAGCCCTGGCCCGGTaGTCGGGAATGTGGAGCTGGCACTGTCACTGTGTG +
Preference number: 6 (lower is better)
Translates to: ERNDSVEPALAR*SGMWSWHCHCV
Trigger: CACACAGTGACAGTGCCAGCTCCACATTCCCGACCACCGGGCCAGGGCTGGTTCCACGCTGTCATTTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331803.8
ENST00000416681.5
ENST00000432131.5
CDS CCA 72 bp TCGAATGAGGGAACCACCTGCGAGGTGAATCTCATATaGAGTCTGCGAGCGGCCCCGCCCCACGTGGTCCTA +
Preference number: 6 (lower is better)
Translates to: SNEGTTCEVNLI*SLRAAPPHVVL
Trigger: TAGGACCACGTGGGGCGGGGCCGCTCGCAGACTCCATATGAGATTCACCTCGCAGGTGGTTCCCTCATTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331803.8
CDS CAA 90 bp GGGCCTGGAGTGGTCAAGCCCCTTGGAATTCCAGCATCACTCACATaGGGACGCACAGGCCCCCTCCAGTGTCAGCTGCCATCTTCACCA +
Preference number: 6 (lower is better)
Translates to: GPGVVKPLGIPASLT*GRTGPLQCQLPSSP
Trigger: TGGTGAAGATGGCAGCTGACACTGGAGGGGGCCTGTGCGTCCCAATGTGAGTGATGCTGGAATTCCAAGGGGCTTGACCACTCCAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 90 bp TTTCAGCAGCTTCTCCCAGCACTGGGGCTGGAGCTAGAGGAGAGCTaGGCTGATGCCTTGGTGAACCCACAGGGCCTGGAGTGGTCAAGC +
Preference number: 6 (lower is better)
Translates to: FQQLLPALGLELEES*ADALVNPQGLEWSS
Trigger: GCTTGACCACTCCAGGCCCTGTGGGTTCACCAAGGCATCAGCCAAGCTCTCCTCTAGCTCCAGCCCCAGTGCTGGGAGAAGCTGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 72 bp GGGCTCCAGACTTGTGACTTTCAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTCCGCCAACTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: GLQTCDFQLSLH*LPWPPFRQLRQ
Trigger: CTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAAGTCTGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS CCA 72 bp GGCAGAGGCCAGCATGCTATGCACAGCTGTGTCAGGTaGGCAGCATCGGAGACTAAGCTTGCAGGACCGAGA +
Preference number: 6 (lower is better)
Translates to: GRGQHAMHSCVR*AASETKLAGPR
Trigger: TCTCGGTCCTGCAAGCTTAGTCTCCGATGCTGCCCACCTGACACAGCTGTGCATAGCATGCTGGCCTCTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 72 bp GTGGTCAAGCCCCTTGGAATTCCAGCATCACTCACATaGGGACGCACAGGCCCCCTCCAGTGTCAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: VVKPLGIPASLT*GRTGPLQCQLP
Trigger: TGGCAGCTGACACTGGAGGGGGCCTGTGCGTCCCAATGTGAGTGATGCTGGAATTCCAAGGGGCTTGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 72 bp CATTGTGACTTTCAGCTTTCTCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTGAGGCAGGACCCGTCA +
Preference number: 6 (lower is better)
Translates to: HCDFQLSLHWLP*PPFRQLRQDPS
Trigger: TGACGGGTCCTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331803.8
ENST00000395564.9
ENST00000416681.5
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
CDS CCA 72 bp CGGGGCAATCATTGTGACTTTCAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTCCGCCAACTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: RGNHCDFQLSLH*LPWPPFRQLRQ
Trigger: CTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAATGATTGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331803.8
ENST00000395564.9
ENST00000416681.5
ENST00000421046.5
ENST00000432131.5
ENST00000436673.5
ENST00000444999.5
CDS CCA 72 bp GTCAGTTCCCGCACAGATGTTGGGATAGTCTCTACCTaGGCAGTCAAGGCCCAGCTCTGCACCAACGCACCT +
Preference number: 6 (lower is better)
Translates to: VSSRTDVGIVST*AVKAQLCTNAP
Trigger: AGGTGCGTTGGTGCAGAGCTGGGCCTTGACTGCCCAGGTAGAGACTATCCCAACATCTGTGCGGGAACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331803.8
ENST00000395564.9
ENST00000416681.5
ENST00000421046.5
ENST00000436673.5
CDS CCA 72 bp ACTTGTGACTTTCAGCTTTCTCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTGAGGCAGGACCCGTCA +
Preference number: 6 (lower is better)
Translates to: TCDFQLSLHWLP*PPFRQLRQDPS
Trigger: TGACGGGTCCTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS CAA 72 bp ACAGCTGTGTCAGGTGGGCAGCATCGGAGACTAAGCTaGCAGGACCGAGACAGCTCATGGCCGTTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: TAVSGGQHRRLS*QDRDSSWPLVC
Trigger: ACACACCAACGGCCATGAGCTGTCTCGGTCCTGCAAGCTTAGTCTCCGATGCTGCCCACCTGACACAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 90 bp ATGCTATGCACAGCTGTGTCAGGTGGGCAGCATCGGAGACTAAGCTaGCAGGACCGAGACAGCTCATGGCCGTTGGTGTGTTGTCCTAGG +
Preference number: 6 (lower is better)
Translates to: MLCTAVSGGQHRRLS*QDRDSSWPLVCCPR
Trigger: CCTAGGACAACACACCAACGGCCATGAGCTGTCTCGGTCCTGCAAGCTTAGTCTCCGATGCTGCCCACCTGACACAGCTGTGCATAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS GCA 72 bp GGTCTGTCCATCGCCTTGAGCTTCCCCCTGAGCAGCTaGCAACACAACCAGATCCTGAGGCTTTTTGTCTCC +
Preference number: 6 (lower is better)
Translates to: GLSIALSFPLSS*QHNQILRLFVS
Trigger: GGAGACAAAAAGCCTCAGGATCTGGTTGTGTTGGCAGCTGCTCAGGGGGAAGCTCAAGGCGATGGACAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 72 bp AATTGTGACTTTCAGCTTTCTCTGCATTGGCTCCCGTaGCCGCCATTCCGCCAACTGAGGCAGGACCCGTCA +
Preference number: 6 (lower is better)
Translates to: NCDFQLSLHWLP*PPFRQLRQDPS
Trigger: TGACGGGTCCTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482015.5
CDS CAA 72 bp TTGGTGAACCCACAGGGCCTGGAGTGGTCAAGCCCCTaGGAATTCCAGCATCACTCACATTGGGACGCACAG +
Preference number: 6 (lower is better)
Translates to: LVNPQGLEWSSP*EFQHHSHWDAQ
Trigger: CTGTGCGTCCCAATGTGAGTGATGCTGGAATTCCAAGGGGCTTGACCACTCCAGGCCCTGTGGGTTCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 72 bp TTGGCTGATGCCTTGGTGAACCCACAGGGCCTGGAGTaGTCAAGCCCCTTGGAATTCCAGCATCACTCACAT +
Preference number: 6 (lower is better)
Translates to: LADALVNPQGLE*SSPLEFQHHSH
Trigger: ATGTGAGTGATGCTGGAATTCCAAGGGGCTTGACCACTCCAGGCCCTGTGGGTTCACCAAGGCATCAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS TCA 72 bp GTTAGCCCTCACCAGACACCAAGTTTGCTGACTCCTTaGCCTTGGACTTCGCAGCCTCCAGACTACGCGATA +
Preference number: 6 (lower is better)
Translates to: VSPHQTPSLLTP*PWTSQPPDYAI
Trigger: TATCGCGTAGTCTGGAGGCTGCGAAGTCCAAGGTCAAGGAGTCAGCAAACTTGGTGTCTGGTGAGGGCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS GCA 72 bp TGCTCAAACTCTGCCTTGAAGCAGGTATCCACTGCCTaGTCTGTTATGACCACAGTGCCGGGCTCCAGACTT +
Preference number: 6 (lower is better)
Translates to: CSNSALKQVSTA*SVMTTVPGSRL
Trigger: AAGTCTGGAGCCCGGCACTGTGGTCATAACAGAGCAGGCAGTGGATACCTGCTTCAAGGCAGAGTTTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395560.7
ENST00000417464.6
ENST00000457596.5
CDS CCA 72 bp ACACACACAAATTGTGACTTTCAGCTTTCTCTGCATTaGCTCCCGTGGCCGCCATTCCGCCAACTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: THTNCDFQLSLH*LPWPPFRQLRQ
Trigger: CTGCCTCAGTTGGCGGAATGGCGGCCACGGGAGCCAATGCAGAGAAAGCTGAAAGTCACAATTTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482015.5
CDS CCA 72 bp CATCGGAGACTAAGCTTGCAGGACCGAGACAGCTCATaGCCGTTGGTGTGTTGTCCTAGGGACAATTTCGCT +
Preference number: 6 (lower is better)
Translates to: HRRLSLQDRDSS*PLVCCPRDNFA
Trigger: AGCGAAATTGTCCCTAGGACAACACACCAACGGCCATGAGCTGTCTCGGTCCTGCAAGCTTAGTCTCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS TCA 72 bp ATCCGAAAGTTAGCCCTCACCAGACACCAAGTTTGCTaGCTCCTTGACCTTGGACTTCGCAGCCTCCAGACT +
Preference number: 6 (lower is better)
Translates to: IRKLALTRHQVC*LLDLGLRSLQT
Trigger: AGTCTGGAGGCTGCGAAGTCCAAGGTCAAGGAGTCAGCAAACTTGGTGTCTGGTGAGGGCTAACTTTCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 72 bp CCCTCACCAGACACCAAGTTTGCTGACTCCTTGACCTaGGACTTCGCAGCCTCCAGACTACGCGATAAATTC +
Preference number: 6 (lower is better)
Translates to: PSPDTKFADSLT*DFAASRLRDKF
Trigger: GAATTTATCGCGTAGTCTGGAGGCTGCGAAGTCCAAGGTCAAGGAGTCAGCAAACTTGGTGTCTGGTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 72 bp CTTCGCTCCCCACATGTATCTGAACTCCTCTTTCCATaGCTACTCCTGCGGCTGTTCTGGGCAATTCAGAGT +
Preference number: 6 (lower is better)
Translates to: LRSPHVSELLFP*LLLRLFWAIQS
Trigger: ACTCTGAATTGCCCAGAACAGCCGCAGGAGTAGCAATGGAAAGAGGAGTTCAGATACATGTGGGGAGCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 90 bp CAGCATCGGAGACTAAGCTTGCAGGACCGAGACAGCTCATGGCCGTaGGTGTGTTGTCCTAGGGACAATTTCGCTAAACTTGGAATTACA +
Preference number: 6 (lower is better)
Translates to: QHRRLSLQDRDSSWP*VCCPRDNFAKLGIT
Trigger: TGTAATTCCAAGTTTAGCGAAATTGTCCCTAGGACAACACACCAACGGCCATGAGCTGTCTCGGTCCTGCAAGCTTAGTCTCCGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 72 bp AGACTAAGCTTGCAGGACCGAGACAGCTCATGGCCGTaGGTGTGTTGTCCTAGGGACAATTTCGCTAAACTT +
Preference number: 6 (lower is better)
Translates to: RLSLQDRDSSWP*VCCPRDNFAKL
Trigger: AAGTTTAGCGAAATTGTCCCTAGGACAACACACCAACGGCCATGAGCTGTCTCGGTCCTGCAAGCTTAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS TCA 72 bp TGCCATGTGAGCACACAGGGAGAAAACAGAGCTCTATaGATCCGAAAGTTAGCCCTCACCAGACACCAAGTT +
Preference number: 6 (lower is better)
Translates to: CHVSTQGENRAL*IRKLALTRHQV
Trigger: AACTTGGTGTCTGGTGAGGGCTAACTTTCGGATTCATAGAGCTCTGTTTTCTCCCTGTGTGCTCACATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CCA 72 bp TTAGGGTCCAGTTTCTATGTTCTGGGCGTGCCTTCCTaGAGTAGTTTCCTGTTTGTAGGGACATTACTCTGC +
Preference number: 6 (lower is better)
Translates to: LGSSFYVLGVPS*SSFLFVGTLLC
Trigger: GCAGAGTAATGTCCCTACAAACAGGAAACTACTCCAGGAAGGCACGCCCAGAACATAGAAACTGGACCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS GCA 72 bp CACATGTATCTGAACTCCTCTTTCCATTGCTACTCCTaGGGCTGTTCTGGGCAATTCAGAGTCTCATTTCAG +
Preference number: 6 (lower is better)
Translates to: HMYLNSSFHCYS*GCSGQFRVSFQ
Trigger: CTGAAATGAGACTCTGAATTGCCCAGAACAGCCGCAGGAGTAGCAATGGAAAGAGGAGTTCAGATACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS GCA 72 bp GGCCAGGAACCTTCAAGTACTTTGTCCCATATTTCTTaGTTCCATTCACGGCGATTTCCCACTGTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: GQEPSSTLSHIS*FHSRRFPTVVC
Trigger: ACAGACAACAGTGGGAAATCGCCGTGAATGGAAGCAAGAAATATGGGACAAAGTACTTGAAGGTTCCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 72 bp TGGCCAGGAACCTTCAAGTACTTTGTCCCATATTTCTaGCTTCCATTCACGGCGATTTCCCACTGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: WPGTFKYFVPYF*LPFTAISHCCL
Trigger: CAGACAACAGTGGGAAATCGCCGTGAATGGAAGCAAGAAATATGGGACAAAGTACTTGAAGGTTCCTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 90 bp TTGACCTTGGACTTCGCAGCCTCCAGACTACGCGATAAATTCCTATaGTTTATAAGCCACTCAGTCAATGGCATCTTGTCTATCAACCTG +
Preference number: 6 (lower is better)
Translates to: LTLDFAASRLRDKFL*FISHSVNGILSINL
Trigger: CAGGTTGATAGACAAGATGCCATTGACTGAGTGGCTTATAAACAATAGGAATTTATCGCGTAGTCTGGAGGCTGCGAAGTCCAAGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 90 bp CTTTGTCCCATATTTCTTGCTTCCATTCACGGCGATTTCCCACTGTaGTCTGTCACTGAACCATATACCATGATGTGTTTCATTGATCCC +
Preference number: 6 (lower is better)
Translates to: LCPIFLASIHGDFPL*SVTEPYTMMCFIDP
Trigger: GGGATCAATGAAACACATCATGGTATATGGTTCAGTGACAGACAACAGTGGGAAATCGCCGTGAATGGAAGCAAGAAATATGGGACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS TCA 72 bp ATAGTACAGCAGCTTTATGAGCTCATGCAACATGATTaGGATAGAAGGAATGCCCATACCATGACTGACAGA +
Preference number: 6 (lower is better)
Translates to: IVQQLYELMQHD*DRRNAHTMTDR
Trigger: TCTGTCAGTCATGGTATGGGCATTCCTTCTATCTCAATCATGTTGCATGAGCTCATAAAGCTGCTGTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331803.8
ENST00000395564.9
ENST00000416681.5
ENST00000421046.5
ENST00000436673.5
CDS TCA 72 bp ATAGTACAGCAGCTTTATGAGCTCATGCAACATGATTaGGATAGAAGGAATGCCCATACCATGCTGATGAAG +
Preference number: 6 (lower is better)
Translates to: IVQQLYELMQHD*DRRNAHTMLMK
Trigger: CTTCATCAGCATGGTATGGGCATTCCTTCTATCTCAATCATGTTGCATGAGCTCATAAAGCTGCTGTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444999.5
CDS TCA 72 bp ATTTCCCACTGTTGTCTGTCACTGAACCATATACCATaGTGTGTTTCATTGATCCCTGTTTCATACCTTGTT +
Preference number: 6 (lower is better)
Translates to: ISHCCLSLNHIP*CVSLIPVSYLV
Trigger: AACAAGGTATGAAACAGGGATCAATGAAACACATCATGGTATATGGTTCAGTGACAGACAACAGTGGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495446.1
CDS CAA 72 bp CGTTGGTGTGTTGTCCTAGGGACAATTTCGCTAAACTaGGAATTACAGTCATACAAACACAGATTTTATGCA +
Preference number: 6 (lower is better)
Translates to: RWCVVLGTISLN*ELQSYKHRFYA
Trigger: TGCATAAAATCTGTGTTTGTATGACTGTAATTCCAAGTTTAGCGAAATTGTCCCTAGGACAACACACCAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495446.1