Pregenerated sensors for UPK3A (Homo sapiens)
Ensembl gene IDs: ENSG00000100373Ensembl transcript IDs: ENST00000216211.9, ENST00000396082.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTaGAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: RVFLQLEGQALFHLP*SQGVTTTAAGPGAR Trigger: CCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGTGTGACAACCACCGCTaGAGGGCCTGGGGCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGCDNHR*RAWGKA Trigger: GGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACA...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGCAGAGAGGAGGATGCTaGTGCCCAGGGGTGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGQRGGC*CPGVVL Trigger: CAGCACCACCCCTGGGCAGCAGCATCCTCCTCTCTG...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGATCCGCTCCGCCGGCCTaGCCACGTGTCGATCGTCGA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARSAPPA*PRVDRR Trigger: TCGACGATCGACACGTGGCCAGGCCGGCGGAGCGGA...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACTCAGCCCTGTCCAGTaGCGGCCCCCGGTTCACGGA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARLSPVQ*RPPVHG Trigger: TCCGTGAACCGGGGGCCGCCACTGGACAGGGCTGAG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACTGGCCAGTTGGGGCTaGAGGTTCACAGCCGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARLASWG*RFTAEP Trigger: CGGCTCGGCTGTGAACCTGCAGCCCCAACTGGCCAG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGCTGCCCAGGGGTGGTaGTGGGCTCAGTCTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARAAQGW*WAQSWS Trigger: GCTCCAAGACTGAGCCCAGCACCACCCCTGGGCAGC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAAGAGGAGGATGCTGCTaGCCAGGGGTGGTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARRGGCC*PGVVLG Trigger: GCCCAGCACCACCCCTGGGCAGCAGCATCCTCCTCT...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGATGTGACAACCACCGCTaGAGGGCCTGGGGCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARCDNHR*RAWGKA Trigger: GGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACA...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGCTGCTGCCCAGGGGTaGTGCTGGGCTCAGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARAAAQG*CWAQSW Trigger: CCAAGACTGAGCCCAGCACCACCCCTGGGCAGCAGC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACCATGTCCACGAGGCTaGGGGCAATGGCGCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARPCPRG*GQWRQQ Trigger: TTGCTGGCGCCATTGCCCTCAGCCTCGTGGACATGG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACCTGAAGTCAGGGTGTaGCAACCACCGCTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARPEVRV*QPPLQG Trigger: GCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGGCTGCCGACAGGGGTaGGTTACAGAGGCCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARGCRQG*VTEALE Trigger: TTCCAGGGCCTCTGTAACGCACCCCTGTCGGCAGCC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACAGAGAGGAGGATGCTaGTGCCCAGGGGTGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARQRGGC*CPGVVL Trigger: CAGCACCACCCCTGGGCAGCAGCATCCTCCTCTCTG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGCCCAGGGGTGGTGCTaGGCTCAGTCTTGGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARAQGWC*AQSWSL Trigger: CAAGCTCCAAGACTGAGCCCAGCACCACCCCTGGGC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACCTCGTGGGTGCCAGTaGGGGCCTCTTTGCTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARPRGCQ*GPLCCQ Trigger: TTGACAGCAAAGAGGCCCTCACTGGCACCCACGAGG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACCTGTACTCCGTGGCTaGCGACAGGGGTGCGTTACA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARPVLRG*RQGCVT Trigger: TGTAACGCACCCCTGTCGGCAGCCACGGAGTACAGG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGTCACACTGGCCAGTTaGGGCTGCAGGTTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARVTLAS*GCRFTA Trigger: GGCTGTGAACCTGCAGCCCCAACTGGCCAGTGTGAC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGATGGCGAAAGTCACACTaGCCAGTTGGGGCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARWRKSH*PVGAAG Trigger: ACCTGCAGCCCCAACTGGCCAGTGTGACTTTCGCCA...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAAGCCCAGTGGGGTGTTaGTGCTGTCTTGCACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARSPVGC*CCLALR Trigger: CCTCAGTGCAAGACAGCACCAACACCCCACTGGGCT...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGATGGACACATCCCCAATaGCATCCAGGCTGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARWTHPQ*HPGWAG Trigger: ACCTGCCCAGCCTGGATGCCATTGGGGATGTGTCCA...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGATCTGACCACAGGGTCTaGTCCTCTACCAAGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARSDHRV*SSTKPV Trigger: CACGGGCTTGGTAGAGGACCAGACCCTGTGGTCAGA...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGAGTATGGGGTGAGCTaGTTGGTGCGGATGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKAREYGVS*LVRMGS Trigger: AGACCCCATCCGCACCAACCAGCTCACCCCATACTC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGTCGATCGTCGAGTATaGGGTGAGCTGGTTGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARVDRRV*GELVGA Trigger: CGCACCAACCAGCTCACCCCATACTCGACGATCGAC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR TCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGGTGCTGTCTTGCACTaGGGCATTCCTGGAAATGGC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARGAVLH*GIPGNG Trigger: GCCATTTCCAGGAATGCCTCAGTGCAAGACAGCACC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR TCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGAACAGCCTCCTGAGTaGTTTGGGAGTCGTGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKAREQPPE*FGSRES Trigger: CGACTCACGACTCCCAAATCACTCAGGAGGCTGTTC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACGAGTATGGGGTGACTaGGTCGACCAGGACATACAG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARRVWGD*VDQDIQ Trigger: CTGTATGTCCTGGTCGACTCAGTCACCCCATACTCG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396082.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGTGTGGGGTTGTTGGTaGCGAAAGTCACACTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARVWGCW*RKSHWP Trigger: TGGCCAGTGTGACTTTCGCCACCAACAACCCCACAC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACTGTTTCACCTTCCCTaGAGTCAGGGTGTGACAACC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARLFHLP*SQGVTT Trigger: GGTTGTCACACCCTGACTTCAGGGAAGGTGAAACAG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACTCAGTCTTGGAGCTTaGTGGAATACACCTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARLSLGA*WNTPQP Trigger: GGGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR GCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGGCTGCCCAGGGGTGGTaGTGGGCTCAGTCTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGAAQGW*WAQSWS Trigger: GCTCCAAGACTGAGCCCAGCACCACCCCTGGGCAGC...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR GCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGAGAGGAGGATGCTGCTaGCCAGGGGTGGTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGRGGCC*PGVVLG Trigger: GCCCAGCACCACCCCTGGGCAGCAGCATCCTCCTCT...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGGGTTTTCCTGCAGTTaGAGGGACAAGCCCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARGFSCS*RDKPCF Trigger: GAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACCC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR TCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGTGATTTGGGAGTCGTaGGTCGTTTCCCCATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARVIWES*VVSPSE Trigger: TTCTGATGGGGAAACGACTCACGACTCCCAAATCAC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR TCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGCCTGAAGTCAGGGTGTaGCAACCACCGCTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGPEVRV*QPPLQG Trigger: GCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGG...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR GCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGTGTTGGTGCTGTCTTaGACTGAGGCATTCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARVLVLS*TEAFLE Trigger: TTCCAGGAATGCCTCAGTGCAAGACAGCACCAACAC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAAGTCTTGGAGCTTGCTaGAATACACCTCAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLKSGCDNHRCRAWGKARSLGAC*NTPQPC Trigger: ACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACT...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR TCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGCGTTGGCACCCACCCTaGCCAGGTAGGCATTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGRWHPP*PGRHSG Trigger: TCCTGAATGCCTACCTGGTCAGGGTGGGTGCCAACG...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR GCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGGGCTGGGCAGGTCACTaGAGGGGATCAGGTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGGWAGH*RGSGQR Trigger: CCTTTGACCTGATCCCCTGCAGTGACCTGCCCAGCC...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGGCTGGTTGGTGCGGATaGGGTCTGACCACAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGAGWCG*GLTTGS Trigger: AGACCCTGTGGTCAGACCCCATCCGCACCAACCAGC...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR TCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGGGCATTCAGGATCTGTaGGGCCTTGGACACATCCCC | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGGIQDL*GLGHIP Trigger: GGGGATGTGTCCAAGGCCTCACAGATCCTGAATGCC...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGTGGCGAAAGTCACACTaGCCAGTTGGGGCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGWRKSH*PVGAAG Trigger: ACCTGCAGCCCCAACTGGCCAGTGTGACTTTCGCCA...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR GCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGCCAGTGGGGTGTTGGTaGTGTCTTGCACTGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGPVGCW*CLALRH Trigger: ATGCCTCAGTGCAAGACAGCACCAACACCCCACTGG...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGGTGTGGGGTTGTTGGTaGCGAAAGTCACACTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGVWGCW*RKSHWP Trigger: TGGCCAGTGTGACTTTCGCCACCAACAACCCCACAC...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGGCACTGAGGCATTCCTaGAAATGGCTGAGTCGACCA | + |
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Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGALRHS*KWLSRP Trigger: TGGTCGACTCAGCCATTTCCAGGAATGCCTCAGTGC...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGGGATCTGTGAGGCCTTaGACACATCCCCAATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGGSVRP*THPQWH Trigger: ATGCCATTGGGGATGTGTCCAAGGCCTCACAGATCC...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CCA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGAGTCTTGGAGCTTGCTaGAATACACCTCAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGSLGAC*NTPQPC Trigger: ACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACT...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACACAGGCAGGTCCCGTaGGCACCCACCCTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKARHRQVP*APTLTR Trigger: CCTGGTCAGGGTGGGTGCCAACGGGACCTGCCTGTG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CCA 90 bp | ATGCTGCTGCCCAGGGGTGGTGCTGGGCTCAGTCTTGGAGCTTGCTaGAATACACCTCAGCCCTGTCCAGTGGCGGCCCCCGGTTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: MLLPRGGAGLSLGAC*NTPQPCPVAAPGSR Trigger: CCGTGAACCGGGGGCCGCCACTGGACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAGCCCAGCACCACCCCTGGGCAGCAGCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS GCA 90 bp | AGGATGCTGCTGCCCAGGGGTGGTGCTGGGCTCAGTCTTGGAGCTTaGTGGAATACACCTCAGCCCTGTCCAGTGGCGGCCCCCGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RMLLPRGGAGLSLGA*WNTPQPCPVAAPGS Trigger: TGAACCGGGGGCCGCCACTGGACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAGCCCAGCACCACCCCTGGGCAGCAGCATCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS CCA 90 bp | GGCTCAGTCTTGGAGCTTGCTGGAATACACCTCAGCCCTGTCCAGTaGCGGCCCCCGGTTCACGGACGTGTAGGAAGACTCCGAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSVLELAGIHLSPVQ*RPPVHGRVGRLRGP Trigger: GGGGCCTCGGAGTCTTCCTACACGTCCGTGAACCGGGGGCCGCCACTGGACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS CCA 90 bp | AGAGAGGAGGATGCTGCTGCCCAGGGGTGGTGCTGGGCTCAGTCTTaGAGCTTGCTGGAATACACCTCAGCCCTGTCCAGTGGCGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: REEDAAAQGWCWAQS*SLLEYTSALSSGGP Trigger: GGGGCCGCCACTGGACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAGCCCAGCACCACCCCTGGGCAGCAGCATCCTCCTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAAGTCACACTGGCCAGTaGGGGCTGCAGGTTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKARSHTGQ*GLQVHS Trigger: GCTGTGAACCTGCAGCCCCAACTGGCCAGTGTGACT...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGAGCCCAGTGGGGTGTaGGTGCTGTCTTGCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKAREPSGV*VLSCTE Trigger: CTCAGTGCAAGACAGCACCAACACCCCACTGGGCTC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGATATGGGGTGAGCTGGTaGGTGCGGATGGGGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKARYGVSW*VRMGSD Trigger: GTCAGACCCCATCCGCACCAACCAGCTCACCCCATA...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS TCA 90 bp | GGTCCCGTTGGCACCCACCCTGACCAGGTAGGCATTCAGGATCTGTaGGGCCTTGGACACATCCCCAATGGCATCCAGGCTGGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GPVGTHPDQVGIQDL*GLGHIPNGIQAGQV Trigger: GACCTGCCCAGCCTGGATGCCATTGGGGATGTGTCCAAGGCCTCACAGATCCTGAATGCCTACCTGGTCAGGGTGGGTGCCAACGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS TCA 90 bp | CCTGGAAGTTGGGATCCCACAGGCAGGTCCCGTTGGCACCCACCCTaGCCAGGTAGGCATTCAGGATCTGTGAGGCCTTGGACACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSWDPTGRSRWHPP*PGRHSGSVRPWTHP Trigger: GGGATGTGTCCAAGGCCTCACAGATCCTGAATGCCTACCTGGTCAGGGTGGGTGCCAACGGGACCTGCCTGTGGGATCCCAACTTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGACTGTTTGTAGGAACGTaGAGCCCAGTGGGGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKARLFVGT*SPVGCW Trigger: CCAACACCCCACTGGGCTCAACGTTCCTACAAACAG...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGCTCAGTCTTGGAGCTaGCTGGAATACACCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKARAQSWS*LEYTSA Trigger: GGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAGC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS GCA 90 bp | AGGCCTTGGACACATCCCCAATGGCATCCAGGCTGGGCAGGTCACTaGAGGGGATCAGGTCAAAGGCCACAGCTTTGTAGGGACCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPWTHPQWHPGWAGH*RGSGQRPQLCRDLS Trigger: GGACAGGTCCCTACAAAGCTGTGGCCTTTGACCTGATCCCCTGCAGTGACCTGCCCAGCCTGGATGCCATTGGGGATGTGTCCAAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAGTAAGTGTGGGGTTGTaGGTGGCGAAAGTCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKARVSVGL*VAKVTL Trigger: CAGTGTGACTTTCGCCACCAACAACCCCACACTTAC...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGAAGCCTCCTGAGTGATTaGGGAGTCGTGAGTCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKARSLLSD*GVVSRF Trigger: GAAACGACTCACGACTCCCAAATCACTCAGGAGGCT...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGAAGTCAGGGTGTGACAACCACCGCTGCAGGGCCTGGGGCAAGGCCAGATTGACCAGGACATACTaGAACCTGTACTCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLKSGCDNHRCRAWGKARLTRTY*NLYSVA Trigger: AGCCACGGAGTACAGGTTCAAGTATGTCCTGGTCAA...TCTGGCCTTGCCCCAGGCCCTGCAGCGGTGGTTGTCACACCCTGACTTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CCA 90 bp | TCAGGATCTGTGAGGCCTTGGACACATCCCCAATGGCATCCAGGCTaGGCAGGTCACTGCAGGGGATCAGGTCAAAGGCCACAGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SGSVRPWTHPQWHPG*AGHCRGSGQRPQLC Trigger: ACAAAGCTGTGGCCTTTGACCTGATCCCCTGCAGTGACCTGCCCAGCCTGGATGCCATTGGGGATGTGTCCAAGGCCTCACAGATCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGAGTCACACTGGCCAGTaGGGGCTGCAGGTTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGSHTGQ*GLQVHS Trigger: GCTGTGAACCTGCAGCCCCAACTGGCCAGTGTGACT...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CCA 90 bp | TATGGGGTGAGCTGGTTGGTGCGGATGGGGTCTGACCACAGGGTCTaGTCCTCTACCAAGCCCGTGGACATATTGACCAGGACATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: YGVSWLVRMGSDHRV*SSTKPVDILTRTYL Trigger: CAAGTATGTCCTGGTCAATATGTCCACGGGCTTGGTAGAGGACCAGACCCTGTGGTCAGACCCCATCCGCACCAACCAGCTCACCCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS TCA 90 bp | TGGCTGAGTCGACCAGGACATACAGGTAGACCTCGTGGGTGCCAGTaGGGGCCTCTTTGCTGTCAAACATGCAGAGAGGCTTTTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WLSRPGHTGRPRGCQ*GPLCCQTCREAFPR Trigger: CCTTGGAAAAGCCTCTCTGCATGTTTGACAGCAAAGAGGCCCTCACTGGCACCCACGAGGTCTACCTGTATGTCCTGGTCGACTCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS GCA 90 bp | TCCCACCCTCTGTTTGTAGGAACGTTGAGCCCAGTGGGGTGTTGGTaGTGTCTTGCACTGAGGCATTCCTGGAAATGGCTGAGTCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SHPLFVGTLSPVGCW*CLALRHSWKWLSRP Trigger: TGGTCGACTCAGCCATTTCCAGGAATGCCTCAGTGCAAGACAGCACCAACACCCCACTGGGCTCAACGTTCCTACAAACAGAGGGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGGTAAGTGTGGGGTTGTaGGTGGCGAAAGTCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGVSVGL*VAKVTL Trigger: CAGTGTGACTTTCGCCACCAACAACCCCACACTTAC...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGCCAGTGAGGGCCTCTTaGCTGTCAAACATGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGPVRAS*LSNMQR Trigger: TCTCTGCATGTTTGACAGCAAAGAGGCCCTCACTGG...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGAGGGTTTTCCTGCAGTaGGAGGGACAAGCCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGRVFLQ*EGQALF Trigger: AAACAGGGCTTGTCCCTCCAACTGCAGGAAAACCCT...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS GCA 90 bp | TCTGTTTGTAGGAACGTTGAGCCCAGTGGGGTGTTGGTGCTGTCTTaGACTGAGGCATTCCTGGAAATGGCTGAGTCGACCAGGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: SVCRNVEPSGVLVLS*TEAFLEMAESTRTY Trigger: GTATGTCCTGGTCGACTCAGCCATTTCCAGGAATGCCTCAGTGCAAGACAGCACCAACACCCCACTGGGCTCAACGTTCCTACAAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS-3UTR CAA 90 bp | GGTTTTCCTGCAGTTGGAGGGACAAGCCCTGTTTCACCTTCCCTGAAGTCAGGGAAGCCCGTGGACATATaGACCAGGACATACTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GFPAVGGTSPVSPSLKSGKPVDI*TRTYLN Trigger: GTTCAAGTATGTCCTGGTCAATATGTCCACGGGCTT...CCCTGACTTCAGGGAAGGTGAAACAGGGCTTGTCCCTCCAACTGCAGGAAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CAA 90 bp | GAGGATGCTGCTGCCCAGGGGTGGTGCTGGGCTCAGTCTTGGAGCTaGCTGGAATACACCTCAGCCCTGTCCAGTGGCGGCCCCCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: EDAAAQGWCWAQSWS*LEYTSALSSGGPRF Trigger: GAACCGGGGGCCGCCACTGGACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAGCCCAGCACCACCCCTGGGCAGCAGCATCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS CAA 72 bp | GCTGCCCAGGGGTGGTGCTGGGCTCAGTCTTGGAGCTaGCTGGAATACACCTCAGCCCTGTCCAGTGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAQGWCWAQSWS*LEYTSALSSGG Trigger: GCCGCCACTGGACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAGCCCAGCACCACCCCTGGGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS CAA 90 bp | CAGAGAGGAGGATGCTGCTGCCCAGGGGTGGTGCTGGGCTCAGTCTaGGAGCTTGCTGGAATACACCTCAGCCCTGTCCAGTGGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRGGCCCPGVVLGSV*ELAGIHLSPVQWRP Trigger: GGGCCGCCACTGGACAGGGCTGAGGTGTATTCCAGCAAGCTCCAAGACTGAGCCCAGCACCACCCCTGGGCAGCAGCATCCTCCTCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS GCA 72 bp | TTGTTGGTGGCGAAAGTCACACTGGCCAGTTGGGGCTaGAGGTTCACAGCCGAGCCGAACCGCAGGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LLVAKVTLASWG*RFTAEPNRRQP Trigger: CGGCTGCCTGCGGTTCGGCTCGGCTGTGAACCTGCAGCCCCAACTGGCCAGTGTGACTTTCGCCACCAACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS CCA 72 bp | GTGGGGTTGTTGGTGGCGAAAGTCACACTGGCCAGTTaGGGCTGCAGGTTCACAGCCGAGCCGAACCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGLLVAKVTLAS*GCRFTAEPNRR Trigger: CCTGCGGTTCGGCTCGGCTGTGAACCTGCAGCCCCAACTGGCCAGTGTGACTTTCGCCACCAACAACCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS TCA 72 bp | TGGGATCCCACAGGCAGGTCCCGTTGGCACCCACCCTaGCCAGGTAGGCATTCAGGATCTGTGAGGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WDPTGRSRWHPP*PGRHSGSVRPW Trigger: CCAAGGCCTCACAGATCCTGAATGCCTACCTGGTCAGGGTGGGTGCCAACGGGACCTGCCTGTGGGATCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CAA 72 bp | TGTGGGGTTGTTGGTGGCGAAAGTCACACTGGCCAGTaGGGGCTGCAGGTTCACAGCCGAGCCGAACCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CGVVGGESHTGQ*GLQVHSRAEPQ Trigger: CTGCGGTTCGGCTCGGCTGTGAACCTGCAGCCCCAACTGGCCAGTGTGACTTTCGCCACCAACAACCCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS CCA 72 bp | GTGAGGCCTTGGACACATCCCCAATGGCATCCAGGCTaGGCAGGTCACTGCAGGGGATCAGGTCAAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VRPWTHPQWHPG*AGHCRGSGQRP Trigger: TGGCCTTTGACCTGATCCCCTGCAGTGACCTGCCCAGCCTGGATGCCATTGGGGATGTGTCCAAGGCCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS TCA 72 bp | GGCACCCACCCTGACCAGGTAGGCATTCAGGATCTGTaGGGCCTTGGACACATCCCCAATGGCATCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTHPDQVGIQDL*GLGHIPNGIQA Trigger: AGCCTGGATGCCATTGGGGATGTGTCCAAGGCCTCACAGATCCTGAATGCCTACCTGGTCAGGGTGGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS TCA 72 bp | CCGAGGCCCCCAGCGACTTGGGAACAGCCTCCTGAGTaGTTTGGGAGTCGTGAGTCGTTTCCCCATCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRPPATWEQPPE*FGSRESFPHQN Trigger: GTTCTGATGGGGAAACGACTCACGACTCCCAAATCACTCAGGAGGCTGTTCCCAAGTCGCTGGGGGCCTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS CCA 72 bp | AGCTGGTTGGTGCGGATGGGGTCTGACCACAGGGTCTaGTCCTCTACCAAGCCCGTGGACATATTGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWLVRMGSDHRV*SSTKPVDILTR Trigger: CCTGGTCAATATGTCCACGGGCTTGGTAGAGGACCAGACCCTGTGGTCAGACCCCATCCGCACCAACCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CAA 72 bp | GGCCCCCAGCGACTTGGGAACAGCCTCCTGAGTGATTaGGGAGTCGTGAGTCGTTTCCCCATCAGAACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPQRLGNSLLSD*GVVSRFPIRTP Trigger: GGGAGTTCTGATGGGGAAACGACTCACGACTCCCAAATCACTCAGGAGGCTGTTCCCAAGTCGCTGGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS GCA 72 bp | ACACATCCCCAATGGCATCCAGGCTGGGCAGGTCACTaGAGGGGATCAGGTCAAAGGCCACAGCTTTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: THPQWHPGWAGH*RGSGQRPQLCR Trigger: CCTACAAAGCTGTGGCCTTTGACCTGATCCCCTGCAGTGACCTGCCCAGCCTGGATGCCATTGGGGATGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CAA 72 bp | AGGGACCTGTCCTCCCACCCTCTGTTTGTAGGAACGTaGAGCCCAGTGGGGTGTTGGTGCTGTCTTGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: RDLSSHPLFVGT*SPVGCWCCLAL Trigger: CAGTGCAAGACAGCACCAACACCCCACTGGGCTCAACGTTCCTACAAACAGAGGGTGGGAGGACAGGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CAA 90 bp | GTCCTCCCACCCTCTGTTTGTAGGAACGTTGAGCCCAGTGGGGTGTaGGTGCTGTCTTGCACTGAGGCATTCCTGGAAATGGCTGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VLPPSVCRNVEPSGV*VLSCTEAFLEMAES Trigger: CGACTCAGCCATTTCCAGGAATGCCTCAGTGCAAGACAGCACCAACACCCCACTGGGCTCAACGTTCCTACAAACAGAGGGTGGGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CAA 90 bp | CAGCTTTGTAGGGACCTGTCCTCCCACCCTCTGTTTGTAGGAACGTaGAGCCCAGTGGGGTGTTGGTGCTGTCTTGCACTGAGGCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: QLCRDLSSHPLFVGT*SPVGCWCCLALRHS Trigger: GGAATGCCTCAGTGCAAGACAGCACCAACACCCCACTGGGCTCAACGTTCCTACAAACAGAGGGTGGGAGGACAGGTCCCTACAAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS TCA 72 bp | CGACCAGGACATACAGGTAGACCTCGTGGGTGCCAGTaGGGGCCTCTTTGCTGTCAAACATGCAGAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPGHTGRPRGCQ*GPLCCQTCREA Trigger: AGCCTCTCTGCATGTTTGACAGCAAAGAGGCCCTCACTGGCACCCACGAGGTCTACCTGTATGTCCTGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216211.9 ENST00000396082.2 |
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| CDS GCA 72 bp | AGGAACGTTGAGCCCAGTGGGGTGTTGGTGCTGTCTTaGACTGAGGCATTCCTGGAAATGGCTGAGTCGACC | + |
|
Preference number: 6 (lower is better) Translates to: RNVEPSGVLVLS*TEAFLEMAEST Trigger: GGTCGACTCAGCCATTTCCAGGAATGCCTCAGTGCAAGACAGCACCAACACCCCACTGGGCTCAACGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS GCA 72 bp | CTGTTTGTAGGAACGTTGAGCCCAGTGGGGTGTTGGTaGTGTCTTGCACTGAGGCATTCCTGGAAATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFVGTLSPVGCW*CLALRHSWKWL Trigger: CAGCCATTTCCAGGAATGCCTCAGTGCAAGACAGCACCAACACCCCACTGGGCTCAACGTTCCTACAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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| CDS CAA 72 bp | CACAGGGTCTGGTCCTCTACCAAGCCCGTGGACATATaGACCAGGACATACTTGAACCTGTACTCCGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: HRVWSSTKPVDI*TRTYLNLYSVA Trigger: AGCCACGGAGTACAGGTTCAAGTATGTCCTGGTCAATATGTCCACGGGCTTGGTAGAGGACCAGACCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216211.9 |
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