RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UPF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000151461

Ensembl transcript IDs: ENST00000356352.6, ENST00000357604.10, ENST00000397053.6, ENST00000460569.1

Found 536 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTaGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAG +
Preference number: 1 (lower is better)
Translates to: KAFSALSGSVGLFRC*QRLVFLPPGPSLSQ
Trigger: CTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CCA 90 bp CCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTaGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAGATTC +
Preference number: 1 (lower is better)
Translates to: PPCLEASACSGVGRG*CFCLLAPACPRFRF
Trigger: GAATCTAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR GCA 90 bp CTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTGGTGTTTCTaGCTCCTGGCCCCAGCCTGTCCCAGGTTTAGATTCGCAACTCTC +
Preference number: 1 (lower is better)
Translates to: LEASACSGVGRGWCF*LLAPACPRFRFATL
Trigger: GAGAGTTGCGAATCTAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR TCA 90 bp CAGCCTGTCCCAGGTTTAGATTCGCAACTCTCTAGACCGACCTGCTaGGATGTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACT +
Preference number: 1 (lower is better)
Translates to: QPVPGLDSQLSRPTC*DVSTALIQLLEDST
Trigger: AGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CCA 90 bp AGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTaGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCTCAG +
Preference number: 1 (lower is better)
Translates to: SSFPPHHYHHNPFLL*LNHLLHALLGVTAQ
Trigger: CTGAGCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR GCA 90 bp TCTCTAGACCGACCTGCTGAGATGTGTCCACTGCTCTCATTCAATTaGTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAAT +
Preference number: 1 (lower is better)
Translates to: SLDRPAEMCPLLSFN*WRTPLTTTSDTGPN
Trigger: ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CCA 90 bp CTAGACCGACCTGCTGAGATGTGTCCACTGCTCTCATTCAATTGCTaGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATGAA +
Preference number: 1 (lower is better)
Translates to: LDRPAEMCPLLSFNC*RTPLTTTSDTGPNE
Trigger: TTCATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR TCA 90 bp TCATCTCCTTCACGCTCTCCTTGGTGTAACTGCTCAGTAGTCAAGTaGACCATCTCATTTCTTGACTGCCATTCTCAAGAGAAGATTAAC +
Preference number: 1 (lower is better)
Translates to: SSPSRSPWCNCSVVK*TISFLDCHSQEKIN
Trigger: GTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGGAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CCA 90 bp TATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTaGGCAGCATTTCCATGTGAAATGTTACAACTTTACAAGTTTTGT +
Preference number: 1 (lower is better)
Translates to: YCSIGKGQISEAGED*AAFPCEMLQLYKFC
Trigger: ACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CAA 90 bp AAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTaGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: KGLFRLVWKRRLVPV*AEAGVSASWPQPVP
Trigger: TGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CAA 90 bp AGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTaGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: RLTLARFPLQKAFSA*SGSVGLFRCWQRLV
Trigger: CACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCGGTGTTGGCAGAGGCTaGTGTTTCTGCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAGVGRG*CFCLLA
Trigger: GGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACC...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR TCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCTCTAGACCGACCTGCTaGGATGTGTCCACTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LTLARFPLQKAFSALSGSSRPTC*DVSTAL
Trigger: GAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGA...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCACTCTCATTCAATTGCTaGAGGACTCCACTAACCACA +
Preference number: 2 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLALSFNC*RTPLTT
Trigger: TGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAG...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGGCTTGTTCCGGTGTTaGCAGAGGCTGGTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHGLFRC*QRLVFL
Trigger: CAGAAACACCAGCCTCTGCCAACACCGGAACAAGCC...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR GCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCCTGCTCTCATTCAATTaGTGGAGGACTCCACTAACC +
Preference number: 2 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCLLSFN*WRTPLT
Trigger: GGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAG...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR GCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAGAGGCTGGTGTTTCTaGCTCCTGGCCCCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: FLTAILKRRLTLARFPLQRGWCF*LLAPAC
Trigger: ACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCT...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR GCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCCTGCTCTCATTCAATTaGTGGAGGACTCCACTAACC +
Preference number: 2 (lower is better)
Translates to: LTLARFPLQKAFSALSGSLLSFN*WRTPLT
Trigger: GGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAG...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCCTCTCATTCAATTGCTaGAGGACTCCACTAACCACA +
Preference number: 2 (lower is better)
Translates to: LTLARFPLQKAFSALSGSLSFNC*RTPLTT
Trigger: TGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAG...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR TCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTCTAGACCGACCTGCTaGGATGTGTCCACTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SLPGGLSGIWISFIILLSSRPTC*DVSTAL
Trigger: GAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGA...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCCTCTCATTCAATTGCTaGAGGACTCCACTAACCACA +
Preference number: 2 (lower is better)
Translates to: LKRRLTLARFPLQKAFSALSFNC*RTPLTT
Trigger: TGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAG...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR TCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTGCTCAGTAGTCAAGTaGACCATCTCATTTCTTGAC +
Preference number: 2 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDCSVVK*TISFLD
Trigger: GTCAAGAAATGAGATGGTTCACTTGACTACTGAGCA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTTTTCCGCCTTGTCTaGAAGCGTCGGCTTGTTCCG +
Preference number: 2 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKLFRLV*KRRLVP
Trigger: CGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR TCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTTTCGTTCGTTTTCTGTaGCATGTTGACGGGCATGTT +
Preference number: 2 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIFVRFL*HVDGHV
Trigger: AACATGCCCGTCAACATGTCACAGAAAACGAACGAA...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCCTTCACGCTCTCCTTaGTGTAACTGCTCAGTAGTC +
Preference number: 2 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKPSRSP*CNCSVV
Trigger: GACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CAA 90 bp TTGTTTTCAATGATACTTACAATGGGCTCACCTAGATCCCTGTTCTaGGGCTGGTATCACTTTTCTAAGCCATCTGAATTAATGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LFSMILTMGSPRSLF*GWYHFSKPSELMLS
Trigger: AGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCATTGTAAGTATCATTGAAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR TCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTGGCAGCATTTCCATGTaGAATGTTACAACTTTACAA +
Preference number: 2 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIGSISM*NVTTLQ
Trigger: TTGTAAAGTTGTAACATTTCACATGGAAATGCTGCC...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR GCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGCTGCTCTCATTCAATTaGTGGAGGACTCCACTAACC +
Preference number: 2 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKLLSFN*WRTPLT
Trigger: GGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAG...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CCA 72 bp CTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTaGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: LEASACSGVGRG*CFCLLAPACPR
Trigger: CCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CAA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACCGGCTTGTTCCGGTGTaGGCAGAGGCTGGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHRLVPV*AEAGVS
Trigger: AGAAACACCAGCCTCTGCCAACACCGGAACAAGCCG...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATTCTGGAAGCGTCGGCTaGTTCCGGTGTTGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNSGSVG*FRCWQR
Trigger: CCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGA...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR GCA 72 bp CGACCTGCTGAGATGTGTCCACTGCTCTCATTCAATTaGTGGAGGACTCCACTAACCACAACATCAGATACA +
Preference number: 3 (lower is better)
Translates to: RPAEMCPLLSFN*WRTPLTTTSDT
Trigger: TGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CCA 72 bp CCTGCTGAGATGTGTCCACTGCTCTCATTCAATTGCTaGAGGACTCCACTAACCACAACATCAGATACAGGA +
Preference number: 3 (lower is better)
Translates to: PAEMCPLLSFNC*RTPLTTTSDTG
Trigger: TCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CAA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGTCTGGAAGCGTCGGCTaGTTCCGGTGTTGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKSGSVG*FRCWQR
Trigger: CCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGA...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CAA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCAAGGCCTTTTCCGCCTaGTCTGGAAGCGTCGGCTTG +
Preference number: 3 (lower is better)
Translates to: SLPGGLSGIWISFIILLSKAFSA*SGSVGL
Trigger: CAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTT...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CAA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACGTTTTCTGTGACATGTaGACGGGCATGTTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDVFCDM*TGMFCF
Trigger: AAAACAAAACATGCCCGTCAACATGTCACAGAAAAC...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CAA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCACTGCTCTCATTCAATaGCTGGAGGACTCCACTAAC +
Preference number: 3 (lower is better)
Translates to: SLPGGLSGIWISFIILLSTALIQ*LEDSTN
Trigger: GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGT...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR-3UTR CAA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTGTTTTCTGTGACATGTaGACGGGCATGTTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIVFCDM*TGMFCF
Trigger: AAAACAAAACATGCCCGTCAACATGTCACAGAAAAC...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCAGAGGCTGGTGTTTCTaGCTCCTGGCCCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGRGWCF*LLAPAC
Trigger: ACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCT...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTTCACTTCTTGGTCCTaGCAGGGCAGCTTTCGCATC +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGFTSWS*QGSFRI
Trigger: GATGCGAAAGCTGCCCTGGCAGGACCAAGAAGTGAA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAACTATGAGCTTGAGATaGGATCCAGTGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLTMSLR*DPVLAS
Trigger: GGAAGCCAGCACTGGATCTCATCTCAAGCTCATAGT...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAAAACGGCATTGTGTCTaGAGACTCAGCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLKRHCV*RLSLSF
Trigger: GAAGGAGAGGCTGAGTCTGCAGACACAATGCCGTTT...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTGGGTCCAGGGAACTTaGAGAGCCATCAGGATTAAC +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGWVQGT*RAIRIN
Trigger: GTTAATCCTGATGGCTCTCCAAGTTCCCTGGACCCA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAGAAAAGATGCTCAGGTaGGTCCAGGGAACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLEKMLR*VQGTWR
Trigger: TCTCCAAGTTCCCTGGACCCACCTGAGCATCTTTTC...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCGGCCCTTTCCTCAGCTaGCTTTTGAGATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGGPFLS*LLRCKG
Trigger: TCCTTTGCATCTCAAAAGCCAGCTGAGGAAAGGGCC...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCAGGTCTGCTAAGGATTaGGAATTTGCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGRSAKD*EFASSF
Trigger: GAAGCTGCTGGCAAATTCTCAATCCTTAGCAGACCT...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTCCTCAGCTGGCTTTTaGGATGCAAAGGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGSSAGF*DAKEWQ
Trigger: TTGCCATTCCTTTGCATCTCAAAAGCCAGCTGAGGA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATCCGATGCCCTCAGCTTaGCTCTGGGGTGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNPMPSA*LWGGGS
Trigger: GGACCCGCCACCCCAGAGTCAAGCTGAGGGCATCGG...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTACTTGATATCGTCTTTTaGCCTCTCCTTGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLLDIVF*PLLAAH
Trigger: GTGAGCAGCAAGGAGAGGCCAAAAGACGATATCAAG...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCGGTGTTGGCAGAGGCTaGTGTTTCTGCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCGVGRG*CFCLLA
Trigger: GGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACC...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCGAGATTCTGGAGATCTaGAAAGAAACCGTCCACATG +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGEILEI*KETVHM
Trigger: CATGTGGACGGTTTCTTTTCAGATCTCCAGAATCTC...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTAGAGGCTGGTGTTTCTaGCTCCTGGCCCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRRGWCF*LLAPAC
Trigger: ACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCT...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTATTCTTCCATACTTGCTaGCTTTTTACGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLFFHTC*LFTLSW
Trigger: CCAGCTGAGCGTAAAAAGCCAGCAAGTATGGAAGAA...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTTCCGGACATATTCCTaGAGAGGAGGACGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGFRTYS*RGGRFF
Trigger: AAAGAAACGTCCTCCTCTCCAGGAATATGTCCGGAA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCTTCCCCACCTCCCAGTaGGGGCCCTTTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLFPTSQ*GPFPQL
Trigger: CAGCTGAGGAAAGGGCCCCCACTGGGAGGTGGGGAA...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTGCCGCCTCTCACGATTaGTGTTTGCTGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRAASHD*CLLELG
Trigger: GCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGC...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTACAAATCATCGGGACTTaGTACCTCCTTATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLQIIGT*YLLILL
Trigger: AAGGAGAATAAGGAGGTATCAAGTCCCGATGATTTG...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAAAATTCCCCAGTCGATaGGAAGAGCGAATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLKFPSR*EERIFQ
Trigger: CTGAAAAATTCGCTCTTCTCATCGACTGGGGAATTT...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR GCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTCAGACATGCAGGGATaGAATGTAGCAACCAATCTT +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGSDMQG*NVATNL
Trigger: AAGATTGGTTGCTACATTGCATCCCTGCATGTCTGA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACAGAGGCTGGTGTTTCTaGCTCCTGGCCCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHRGWCF*LLAPAC
Trigger: ACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCT...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACCCTGATCGTCTTCCCTaGGGCATGCCGATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHPDRLP*GMPMPS
Trigger: TGAGGGCATCGGCATGCCGCAGGGAAGACGATCAGG...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR CCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCAGGCCATTAAAATCATaGGACAAGGAGTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGRPLKS*DKESLC
Trigger: ACAGAGAGACTCCTTGTCCCATGATTTTAATGGCCT...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTTTTTCAGCTGGAGGTaGGTTGCAGTAGTAATATGC +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGFFSWR*VAVVIC
Trigger: GCATATTACTACTGCAACCCACCTCCAGCTGAAAAA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAACTCCATCCACAACGTaGATCCCAACATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLATPSTT*IPTSSW
Trigger: CCAAGAGGATGTTGGGATCCACGTTGTGGATGGAGT...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATTTCCCCACCTCCCAGTaGGGGCCCTTTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNFPTSQ*GPFPQL
Trigger: CAGCTGAGGAAAGGGCCCCCACTGGGAGGTGGGGAA...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCCTTTTCCGCCTTGTCTaGAAGCGTCGGCTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCLFRLV*KRRLVP
Trigger: CGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAG...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCACCTTCACGCTCTCCTTaGTGTAACTGCTCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLAPSRSP*CNCSVV
Trigger: GACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGG...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAATATACTACGCCTGCTaGAAAGCAAACCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLIYYAC*KANQRQ
Trigger: CTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATAT...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTACTTTTCTTGTTAACATaGCAAACGGCATTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLLFLLT*QTALCL
Trigger: CAGACACAATGCCGTTTGTCATGTTAACAAGAAAAG...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCACAGGACCTAATGAAATaGCACGTGCTGCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLAQDLMK*HVLLDQ
Trigger: TTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTG...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTTCAGCTGGCATTATGTaGCCCAGGACAATCAGCGCG +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRSAGIM*PRTISA
Trigger: CGCGCTGATTGTCCTGGGTCACATAATGCCAGCTGA...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTACATGCAAAAATCCATTaGTGCCTTGTCTATCAGATC +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLHAKIH*CLVYQI
Trigger: GATCTGATAGACAAGGCAGCAATGGATTTTTGCATG...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTATATCTCGCATCAAGATaGATTGCTTGCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLYLASR*IACFFL
Trigger: GAGAAAGAAGCAAGCAATGCATCTTGATGCGAGATA...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCGATTCACCACTTCGTTaGTGTAGATTTTCTAGCATC +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGDSPLR*CRFSSI
Trigger: GATGCTAGAAAATCTACAGCAACGAAGTGGTGAATC...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGGTGTTTGCTGGAGCTaGGCGCTGTGCAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHGVCWS*ALCKRL
Trigger: CAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACC...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCGCCGCCTCTCACGATTaGTGTTTGCTGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAAASHD*CLLELG
Trigger: GCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGC...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCAATGACACGTGCTGCTaGATCAACGTCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCNDTCC*INVSSH
Trigger: GTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATT...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATGGTGTTGGCAGAGGCTaGTGTTTCTGCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNGVGRG*CFCLLA
Trigger: GGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACC...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTCTGAAAATAACAGCTaGTTCCACCATTCGGTAATT +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGSENNS*FHHSVI
Trigger: AATTACCGAATGGTGGAATCAGCTGTTATTTTCAGA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCTCTAGACCGACCTGCTaGGATGTGTCCACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLSRPTC*DVSTAL
Trigger: GAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGA...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAAGGAACTATGAAGAGTaGCCGTACCAACTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLARNYEE*PYQLLP
Trigger: AGGAAGAAGTTGGTACGGGCACTCTTCATAGTTCCT...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCGTTGCAGTAGTAATATaGATTCTCTACCATTGTGAC +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGVAVVI*ILYHCD
Trigger: GTCACAATGGTAGAGAATGCATATTACTACTGCAAC...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCACTGGTTCCAGTGATTTaGAGCAAGTTGAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLALVPVI*SKLRGH
Trigger: ATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAG...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATCTCACGATTGGTGTTTaGTGGAGCTGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNLTIGV*WSWALC
Trigger: GCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAG...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGCCTGCGGCATGCCGATaGCCTCAGCTTGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQPAACR*PQLDSG
Trigger: CCCAGAGTCAAGCTGAGGGCATCGGCATGCCGCAGG...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR CCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCACTGTCCGGAGCATTTTaGTTTTTGCTACGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLALSGAF*FLLRSS
Trigger: GGAACTTCGTAGCAAAAACCAAAATGCTCCGGACAG...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCACTCTTTACTTTCCTTaGTACAAGTCCAGCAATATC +
Preference number: 4 (lower is better)
Translates to: RPFPPCLEASACSGVGRGTLYFP*YKSSNI
Trigger: GATATTGCTGGACTTGTACCAAGGAAAGTAAAGAGT...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCATTCCGGACATATTCCTaGAGAGGAGGACGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLAFRTYS*RGGRFF
Trigger: AAAGAAACGTCCTCCTCTCCAGGAATATGTCCGGAA...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCGGCCCTTTCCTCAGCTaGCTTTTGAGATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCGPFLS*LLRCKG
Trigger: TCCTTTGCATCTCAAAAGCCAGCTGAGGAAAGGGCC...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCCTTTTCCGCCTTGTCTaGAAGCGTCGGCTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLLFRLV*KRRLVP
Trigger: CGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAG...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCCCTTCACGCTCTCCTTaGTGTAACTGCTCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCPSRSP*CNCSVV
Trigger: GACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGG...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAGCTTGACTCTGGGGTaGCGGGTCCGGGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQSLTLG*RVRGKG
Trigger: GCCTTTGCCCCGGACCCGCCACCCCAGAGTCAAGCT...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATTGAGTCGAGGCGGCTaGAGAAGTTTTCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRLSRGG*RSFPLV
Trigger: GACCAGAGGAAAACTTCTTCAGCCGCCTCGACTCAA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCCAGACCTGAAGAAGTaGTGGGGCAAAGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRPDLKK*WGKVSI
Trigger: TATGCTGACTTTGCCCCATCACTTCTTCAGGTCTGG...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTATCACTACAGAGACATaGGTGTGGGACTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRITTET*VWDSRS
Trigger: TGATCGGGAGTCCCACACTCATGTCTCTGTAGTGAT...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATTCTAGACCGACCTGCTaGGATGTGTCCACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNSRPTC*DVSTAL
Trigger: GAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGA...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCATGCTCAGTAGTCAAGTaGACCATCTCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLACSVVK*TISFLD
Trigger: GTCAAGAAATGAGATGGTTCACTTGACTACTGAGCA...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTTGGCCTCTCCTTGCTaGTCACTGTCCGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDLASPC*SLSAFH
Trigger: GTGAAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATTCACTTCTTGGTCCTaGCAGGGCAGCTTTCGCATC +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRFTSWS*QGSFRI
Trigger: GATGCGAAAGCTGCCCTGGCAGGACCAAGAAGTGAA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCTGGAGCTGGGCGCTGTaGAAGAGACTGCAACATTTC +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSWSWAL*KRLQHF
Trigger: GAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCA...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAATCTCATTTCTTGACTaGCATTCTCAAGAGAAGATT +
Preference number: 4 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLISFLD*HSQEKI
Trigger: AATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGAT...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCTTCCCCACCTCCCAGTaGGGGCCCTTTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFFPTSQ*GPFPQL
Trigger: CAGCTGAGGAAAGGGCCCCCACTGGGAGGTGGGGAA...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATGCCGCCTCTCACGATTaGTGTTTGCTGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNAASHD*CLLELG
Trigger: GCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGC...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATGACACGTGCTGCTaGATCAACGTCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLNDTCC*INVSSH
Trigger: GTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATT...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGGGTGTTGGCAGAGGCTaGTGTTTCTGCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQGVGRG*CFCLLA
Trigger: GGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACC...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCGGCTTGTTCCGGTGTTaGCAGAGGCTGGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAGLFRC*QRLVFL
Trigger: CAGAAACACCAGCCTCTGCCAACACCGGAACAAGCC...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACGGCTTGTTCCGGTGTTaGCAGAGGCTGGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDGLFRC*QRLVFL
Trigger: CAGAAACACCAGCCTCTGCCAACACCGGAACAAGCC...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCCCAGACCTGAAGAAGTaGTGGGGCAAAGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSPDLKK*WGKVSI
Trigger: TATGCTGACTTTGCCCCATCACTTCTTCAGGTCTGG...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACCCAGACCTGAAGAAGTaGTGGGGCAAAGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHPDLKK*WGKVSI
Trigger: TATGCTGACTTTGCCCCATCACTTCTTCAGGTCTGG...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTAGGTCTGCTAAGGATTaGGAATTTGCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRRSAKD*EFASSF
Trigger: GAAGCTGCTGGCAAATTCTCAATCCTTAGCAGACCT...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCACTATGAGCTTGAGATaGGATCCAGTGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLTMSLR*DPVLAS
Trigger: GGAAGCCAGCACTGGATCTCATCTCAAGCTCATAGT...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTACACTGGTCCTCAGGTaGGATTCTGGAGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRTLVLR*DSGDLK
Trigger: TTTCAGATCTCCAGAATCTCACCTGAGGACCAGTGT...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTTCCTCAGCTGGCTTTTaGGATGCAAAGGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRSSAGF*DAKEWQ
Trigger: TTGCCATTCCTTTGCATCTCAAAAGCCAGCTGAGGA...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACCTTTTGGCCTCTCCTTaGTGCTCACTGTCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDLLASP*CSLSAF
Trigger: AAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAG...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCCTAATTCTGAAAAGATaGTCAGGTGGGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCLILKR*SGGSRE
Trigger: TTCCCTGGACCCACCTGAGCATCTTTTCAGAATTAG...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAAACGGCATTGTGTCTaGAGACTCAGCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLKRHCV*RLSLSF
Trigger: GAAGGAGAGGCTGAGTCTGCAGACACAATGCCGTTT...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCCCTCTCTTCTTGTTCTaGCTGTTGCTGGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSPLFLF*LLLVPV
Trigger: CACTGGAACCAGCAACAGGCAGAACAAGAAGAGAGG...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATTGGAGCTGGGCGCTGTaGAAGAGACTGCAACATTTC +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNWSWAL*KRLQHF
Trigger: GAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCA...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCTGCTCTCATTCAATTaGTGGAGGACTCCACTAACC +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRLLSFN*WRTPLT
Trigger: GGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAG...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCATGTCGCATACAGATGTaGTCTCCGACTAAATATACT +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLACRIQM*SPTKYT
Trigger: AGTATATTTAGTCGGAGAGCACATCTGTATGCGACA...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAATTACAACACTTTATTaGAGCATCGGCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLAITTLY*SIGKGQ
Trigger: CTGACCTTTGCCGATGCTGCAATAAAGTGTTGTAAT...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAGTCTTCCCTGCGGCATaGCGATGCCCTCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQVFPAA*RCPQLD
Trigger: GTCAAGCTGAGGGCATCGGCATGCCGCAGGGAAGAC...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGAAGAAGTTTTCCTCTaGTCGGCTGTCCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHEEVFL*SAVRSI
Trigger: AATGCTCCGGACAGCCGACCAGAGGAAAACTTCTTC...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAACTCCATCCACAACGTaGATCCCAACATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRTPSTT*IPTSSW
Trigger: CCAAGAGGATGTTGGGATCCACGTTGTGGATGGAGT...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGGCCCTTTCCTCAGCTaGCTTTTGAGATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSGPFLS*LLRCKG
Trigger: TCCTTTGCATCTCAAAAGCCAGCTGAGGAAAGGGCC...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGGGTGTTTGCTGGAGCTaGGCGCTGTGCAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQGVCWS*ALCKRL
Trigger: CAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACC...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCTCCCTGTTCTTGGGCTaGTATCACTTTTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCSLFLG*YHFSKP
Trigger: TGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGA...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCTGCTCAGTAGTCAAGTaGACCATCTCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCCSVVK*TISFLD
Trigger: GTCAAGAAATGAGATGGTTCACTTGACTACTGAGCA...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGTTGGCCTCTCCTTGCTaGTCACTGTCCGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQLASPC*SLSAFH
Trigger: GTGAAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAA...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAAGAGAGAGCAGAGGTaGACAGCACAGTTCACATCA +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLKREQR*TAQFTS
Trigger: TGATGTGAACTGTGCTGTGCACCTCTGCTCTCTCTT...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGACTCCAGCAGGGTGCATaGCATTTCAATATGGTGATG +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRLQQGA*HFNMVM
Trigger: CATCACCATATTGAAATGGCATGCACCCTGCTGGAG...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGTTGCAGTAGTAATATaGATTCTCTACCATTGTGAC +
Preference number: 4 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLAVAVVI*ILYHCD
Trigger: GTCACAATGGTAGAGAATGCATATTACTACTGCAAC...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCTCACGATTGGTGTTTaGTGGAGCTGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFLTIGV*WSWALC
Trigger: GCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAG...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAACTCACGATTGGTGTTTaGTGGAGCTGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQLTIGV*WSWALC
Trigger: GCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAG...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACCTGCTCTCATTCAATTaGTGGAGGACTCCACTAACC +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHLLSFN*WRTPLT
Trigger: GGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAG...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGACTTCTTGCTGACGTTTaGCCTGCTCTTCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRLLADV*PALLAS
Trigger: AGAAGCAAGAAGAGCAGGCCAAACGTCAGCAAGAAG...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTGTCTCTCAGTATTCTaGAGCTCCCTGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSACLSVF*SSLWSL
Trigger: AAGGGACCACAGGGAGCTCCAGAATACTGAGAGACA...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTGTCTCTCAGTATTCTaGAGCTCCCTGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDCLSVF*SSLWSL
Trigger: AAGGGACCACAGGGAGCTCCAGAATACTGAGAGACA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACAGGCCCATGTTCTTCTaGTGTTGGTTTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHRPMFF*CWFVLR
Trigger: CCTCAAGACAAACCAACACCAGAAGAACATGGGCCT...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTGATGAGATCCAGTGCTaGCTTCCTCATCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRDEIQC*LPHLLV
Trigger: AACAAGAAGATGAGGAAGCCAGCACTGGATCTCATC...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCACTCCATCCACAACGTaGATCCCAACATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSATPSTT*IPTSSW
Trigger: CCAAGAGGATGTTGGGATCCACGTTGTGGATGGAGT...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCCCTTCACGCTCTCCTTaGTGTAACTGCTCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAPSRSP*CNCSVV
Trigger: GACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGG...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCCTAGATCCCTGTTCTTaGGCTGGTATCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCLDPCS*AGITFL
Trigger: TAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAG...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTGACCTTCCTTGTCAGTaGAAATCCCAACTATTGTCA +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRDLPCQ*KSQLLS
Trigger: TGACAATAGTTGGGATTTTCACTGACAAGGAAGGTC...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCCAGGACCTAATGAAATaGCACGTGCTGCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAQDLMK*HVLLDQ
Trigger: TTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTG...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATTCGTTCGTTTTCTGTaGCATGTTGACGGGCATGTT +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRFVRFL*HVDGHV
Trigger: AACATGCCCGTCAACATGTCACAGAAAACGAACGAA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACTTTCATCTGAGCAGCTaGTTCTTCTTCTTGCTGACG +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHFHLSS*FFFLLT
Trigger: CGTCAGCAAGAAGAAGAAGCAGCTGCTCAGATGAAA...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAAGGAACTATGAAGAGTaGCCGTACCAACTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRRNYEE*PYQLLP
Trigger: AGGAAGAAGTTGGTACGGGCACTCTTCATAGTTCCT...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAGGAACTATGAAGAGTaGCCGTACCAACTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLRNYEE*PYQLLP
Trigger: AGGAAGAAGTTGGTACGGGCACTCTTCATAGTTCCT...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATGGAACAAAGATCCTCTaGTACATCAGACATGCAGGG +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNGTKIL*YIRHAG
Trigger: CCCTGCATGTCTGATGTAGCAGAGGATCTTTGTTCC...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACATGTCTCCAGCAGGGTaGATGCCATTTCAATATGGT +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHMSPAG*MPFQYG
Trigger: ACCATATTGAAATGGCATGCACCCTGCTGGAGACAT...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGACTAATTCTGAAAAGATaGTCAGGTGGGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRLILKR*SGGSRE
Trigger: TTCCCTGGACCCACCTGAGCATCTTTTCAGAATTAG...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCGGCCATCCGCGCGACTaGCCGATTAAAAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFGHPRD*PIKNSP
Trigger: AGGACTGTTTTTAATCGGGCAGTCGCGCGGATGGCC...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR CCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATCTTTTTACGCTCAGCTaGCATTATGTGACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNLFTLS*HYVTQD
Trigger: GTCCTGGGTCACATAATGCCAGCTGAGCGTAAAAAG...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACTTCTTCCATACTTGCTaGCTTTTTACGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHFFHTC*LFTLSW
Trigger: CCAGCTGAGCGTAAAAAGCCAGCAAGTATGGAAGAA...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACCTGTCCGGAGCATTTTaGTTTTTGCTACGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHLSGAF*FLLRSS
Trigger: GGAACTTCGTAGCAAAAACCAAAATGCTCCGGACAG...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAGTTTTGCTTCCACGATaGAAGCTACAGCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRVLLPR*KLQLLQ
Trigger: TTGCAGAAGCTGTAGCTTCCATCGTGGAAGCAAAAC...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGTTTTGCTTCCACGATaGAAGCTACAGCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHVLLPR*KLQLLQ
Trigger: TTGCAGAAGCTGTAGCTTCCATCGTGGAAGCAAAAC...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTGGGCTGTTGTTTCTCTaGACTAATTATCTCACTAGG +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRGLLFL*TNYLTR
Trigger: CCTAGTGAGATAATTAGTCCAGAGAAACAACAGCCC...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCCCTCAGGTGAGATTCTaGAGATCTGAAAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSPQVRF*RSEKKP
Trigger: CGGTTTCTTTTCAGATCTCCAGAATCTCACCTGAGG...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCACGATTGGTGTTTGCTaGAGCTGGGCGCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFTIGVC*SWALCK
Trigger: CTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGT...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGACTCTCATTCAATTGCTaGAGGACTCCACTAACCACA +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRLSFNC*RTPLTT
Trigger: TGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAG...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCTTTTCCGCCTTGTCTaGAAGCGTCGGCTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFLFRLV*KRRLVP
Trigger: CGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAG...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCTTGAGTCGAGGCGGCTaGAGAAGTTTTCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFLSRGG*RSFPLV
Trigger: GACCAGAGGAAAACTTCTTCAGCCGCCTCGACTCAA...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCGACCTTCCTTGTCAGTaGAAATCCCAACTATTGTCA +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLDLPCQ*KSQLLS
Trigger: TGACAATAGTTGGGATTTTCACTGACAAGGAAGGTC...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATATCACTACAGAGACATaGGTGTGGGACTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNITTET*VWDSRS
Trigger: TGATCGGGAGTCCCACACTCATGTCTCTGTAGTGAT...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATGAGATTCTGGAGATCTaGAAAGAAACCGTCCACATG +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNEILEI*KETVHM
Trigger: CATGTGGACGGTTTCTTTTCAGATCTCCAGAATCTC...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCCATTCTCTACCATTGTaGCGTATCTCGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSHSLPL*RISHQD
Trigger: ATCTTGATGCGAGATACGTCACAATGGTAGAGAATG...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATGCTCAGTAGTCAAGTaGACCATCTCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRCSVVK*TISFLD
Trigger: GTCAAGAAATGAGATGGTTCACTTGACTACTGAGCA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTGAGGCTGTAAACCCATaGAGGTCAACAAAATATTCT +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKREAVNP*RSTKYS
Trigger: AGAATATTTTGTTGACCTTCATGGGTTTACAGCCTC...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCTTTTGGCCTCTCCTTaGTGCTCACTGTCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFLLASP*CSLSAF
Trigger: AAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAG...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCTCAGACATGCAGGGATaGAATGTAGCAACCAATCTT +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLSDMQG*NVATNL
Trigger: AAGATTGGTTGCTACATTGCATCCCTGCATGTCTGA...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCTTCACTTCTTGGTCCTaGCAGGGCAGCTTTCGCATC +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFFTSWS*QGSFRI
Trigger: GATGCGAAAGCTGCCCTGGCAGGACCAAGAAGTGAA...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCCTAATTCTGAAAAGATaGTCAGGTGGGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSALILKR*SGGSRE
Trigger: TTCCCTGGACCCACCTGAGCATCTTTTCAGAATTAG...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATTCCAAGTCTTGTACCTaGCTGATGGATTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNSKSCT*LMDSSR
Trigger: TCTGGAAGAATCCATCAGGCAGGTACAAGACTTGGA...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCAGCTGGCTTTTGAGATaGAAAGGAATGGCAACATCT +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSSWLLR*KGMATS
Trigger: AGATGTTGCCATTCCTTTGCATCTCAAAAGCCAGCT...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGCCTCTCTTCTTGTTCTaGCTGTTGCTGGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQPLFLF*LLLVPV
Trigger: CACTGGAACCAGCAACAGGCAGAACAAGAAGAGAGG...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATGAAGAAGTTTTCCTCTaGTCGGCTGTCCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNEEVFL*SAVRSI
Trigger: AATGCTCCGGACAGCCGACCAGAGGAAAACTTCTTC...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCGGGCTGTTGTTTCTCTaGACTAATTATCTCACTAGG +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLGLLFL*TNYLTR
Trigger: CCTAGTGAGATAATTAGTCCAGAGAAACAACAGCCC...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCGTCTTGAGGAAGATCTaGCATATTTTCATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCVLRKI*HIFIQK
Trigger: CTTTTGGATGAAAATATGCCAGATCTTCCTCAAGAC...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATTTTTCAGCTGGAGGTaGGTTGCAGTAGTAATATGC +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRFFSWR*VAVVIC
Trigger: GCATATTACTACTGCAACCCACCTCCAGCTGAAAAA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATTGGGTCCAGGGAACTTaGAGAGCCATCAGGATTAAC +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNWVQGT*RAIRIN
Trigger: GTTAATCCTGATGGCTCTCCAAGTTCCCTGGACCCA...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGGGTGTTTGCTGGAGCTaGGCGCTGTGCAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKGVCWS*ALCKRL
Trigger: CAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACC...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGACGATTGGTGTTTGCTaGAGCTGGGCGCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKTIGVC*SWALCK
Trigger: CTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGT...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCAATGACACGTGCTGCTaGATCAACGTCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFNDTCC*INVSSH
Trigger: GTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATT...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTCCCTGTTCTTGGGCTaGTATCACTTTTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDSLFLG*YHFSKP
Trigger: TGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCCTAGATCCCTGTTCTTaGGCTGGTATCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSLDPCS*AGITFL
Trigger: TAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAG...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACCTAGATCCCTGTTCTTaGGCTGGTATCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHLDPCS*AGITFL
Trigger: TAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAG...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCATATACTACGCCTGCTaGAAAGCAAACCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSIYYAC*KANQRQ
Trigger: CTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATAT...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATAGTTCCTTTCTTAAATaGTGTCGTTCCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNSSFLK*CRSQAS
Trigger: GGAAGCTTGGGAACGACATCATTTAAGAAAGGAACT...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACAGTTCCTTTCTTAAATaGTGTCGTTCCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDSSFLK*CRSQAS
Trigger: GGAAGCTTGGGAACGACATCATTTAAGAAAGGAACT...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCATTTTTCTTCAAACTTaGGTCGAGGCGGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAIFLQT*VEAAEE
Trigger: TTCTTCAGCCGCCTCGACTCAAGTTTGAAGAAAAAT...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAATCACTACAGAGACATaGGTGTGGGACTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQITTET*VWDSRS
Trigger: TGATCGGGAGTCCCACACTCATGTCTCTGTAGTGAT...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTAGGTCTGCTAAGGATTaGGAATTTGCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIRSAKD*EFASSF
Trigger: GAAGCTGCTGGCAAATTCTCAATCCTTAGCAGACCT...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCACTATGAGCTTGAGATaGGATCCAGTGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFTMSLR*DPVLAS
Trigger: GGAAGCCAGCACTGGATCTCATCTCAAGCTCATAGT...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTCTATCAGATCTCGGTTaGCACAGTTGGGTAACTGCT +
Preference number: 4 (lower is better)
Translates to: QHFIAASAKVRFLKLVKILSDLG*HSWVTA
Trigger: AGCAGTTACCCAACTGTGTCAACCGAGATCTGATAG...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATTCCTCAGCTGGCTTTTaGGATGCAAAGGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNSSAGF*DAKEWQ
Trigger: TTGCCATTCCTTTGCATCTCAAAAGCCAGCTGAGGA...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTGGCAGCATTTCCATGTaGAATGTTACAACTTTACAA +
Preference number: 4 (lower is better)
Translates to: NPREISITKGLFRLVWKRGSISM*NVTTLQ
Trigger: TTGTAAAGTTGTAACATTTCACATGGAAATGCTGCC...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATGGAACAAAGATCCTCTaGTACATCAGACATGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNGTKIL*YIRHAG
Trigger: CCCTGCATGTCTGATGTAGCAGAGGATCTTTGTTCC...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTCTCCAGCAGGGTGCATaGCATTTCAATATGGTGATG +
Preference number: 4 (lower is better)
Translates to: QHFIAASAKVRFLKLVKILQQGA*HFNMVM
Trigger: CATCACCATATTGAAATGGCATGCACCCTGCTGGAG...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCGATTCACCACTTCGTTaGTGTAGATTTTCTAGCATC +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLDSPLR*CRFSSI
Trigger: GATGCTAGAAAATCTACAGCAACGAAGTGGTGAATC...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAGATTCACCACTTCGTTaGTGTAGATTTTCTAGCATC +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRDSPLR*CRFSSI
Trigger: GATGCTAGAAAATCTACAGCAACGAAGTGGTGAATC...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCGCAACATCTAGTTGGTaGACTTTAACAGATTCACCA +
Preference number: 4 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLATSSW*TLTDSP
Trigger: TGGTGAATCTGTTAAAGTGCACCAACTAGATGTTGC...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCATCTCATTTCTTGACTaGCATTCTCAAGAGAAGATT +
Preference number: 4 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCISFLD*HSQEKI
Trigger: AATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGAT...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCTGTCGCATACAGATGTaGTCTCCGACTAAATATACT +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSCRIQM*SPTKYT
Trigger: AGTATATTTAGTCGGAGAGCACATCTGTATGCGACA...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATCTTTTTACGCTCAGCTaGCATTATGTGACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNLFTLS*HYVTQD
Trigger: GTCCTGGGTCACATAATGCCAGCTGAGCGTAAAAAG...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGCTTGATATCGTCTTTTaGCCTCTCCTTGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQLDIVF*PLLAAH
Trigger: GTGAGCAGCAAGGAGAGGCCAAAAGACGATATCAAG...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATCTTCTTGCTGACGTTTaGCCTGCTCTTCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNLLADV*PALLAS
Trigger: AGAAGCAAGAAGAGCAGGCCAAACGTCAGCAAGAAG...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCTGTCTCTCAGTATTCTaGAGCTCCCTGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFCLSVF*SSLWSL
Trigger: AAGGGACCACAGGGAGCTCCAGAATACTGAGAGACA...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTAGGCCCATGTTCTTCTaGTGTTGGTTTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIRPMFF*CWFVLR
Trigger: CCTCAAGACAAACCAACACCAGAAGAACATGGGCCT...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTTTTTCAGCTGGAGGTaGGTTGCAGTAGTAATATGC +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDFFSWR*VAVVIC
Trigger: GCATATTACTACTGCAACCCACCTCCAGCTGAAAAA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAGTCCTGCTAAGAGGTTaGCTACACAATGAATACTAT +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRVLLRG*LHNEYY
Trigger: ATAGTATTCATTGTGTAGCCAACCTCTTAGCAGGAC...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATGGGTCCAGGGAACTTaGAGAGCCATCAGGATTAAC +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQWVQGT*RAIRIN
Trigger: GTTAATCCTGATGGCTCTCCAAGTTCCCTGGACCCA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCATATACTACGCCTGCTaGAAAGCAAACCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAIYYAC*KANQRQ
Trigger: CTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATAT...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAACACTGGTCCTCAGGTaGGATTCTGGAGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQTLVLR*DSGDLK
Trigger: TTTCAGATCTCCAGAATCTCACCTGAGGACCAGTGT...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACTCTGAAAATAACAGCTaGTTCCACCATTCGGTAATT +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHSENNS*FHHSVI
Trigger: AATTACCGAATGGTGGAATCAGCTGTTATTTTCAGA...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGAGTCTTGTACCTGCCTaGTGGATTCTTCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQSLVPA*WILPEN
Trigger: ATTCTCTGGAAGAATCCATCAGGCAGGTACAAGACT...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTTTTGGCCTCTCCTTaGTGCTCACTGTCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKLLASP*CSLSAF
Trigger: AAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATCATGCAAAAATCCATTaGTGCCTTGTCTATCAGATC +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNHAKIH*CLVYQI
Trigger: GATCTGATAGACAAGGCAGCAATGGATTTTTGCATG...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACCATGCAAAAATCCATTaGTGCCTTGTCTATCAGATC +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDHAKIH*CLVYQI
Trigger: GATCTGATAGACAAGGCAGCAATGGATTTTTGCATG...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATTGTGTTCATGTTCATaGAAAAATCCATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRLCSCS*KNPLLP
Trigger: AGGCAGCAATGGATTTTTGCATGAACATGAACACAA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACGGAACAAAGATCCTCTaGTACATCAGACATGCAGGG +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNGTKIL*YIRHAG
Trigger: CCCTGCATGTCTGATGTAGCAGAGGATCTTTGTTCC...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGCAGCTGGAGGTGGGTTaGAGTAGTAATATGCATTCT +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQQLEVG*SSNMHS
Trigger: AGAATGCATATTACTACTGCAACCCACCTCCAGCTG...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTCAGCTGGAGGTGGGTTaGAGTAGTAATATGCATTCT +
Preference number: 4 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIQLEVG*SSNMHS
Trigger: AGAATGCATATTACTACTGCAACCCACCTCCAGCTG...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATGCAACATCTAGTTGGTaGACTTTAACAGATTCACCA +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNATSSW*TLTDSP
Trigger: TGGTGAATCTGTTAAAGTGCACCAACTAGATGTTGC...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACCTGCTCTCATTCAATTaGTGGAGGACTCCACTAACC +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNLLSFN*WRTPLT
Trigger: GGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAG...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTGTCGCATACAGATGTaGTCTCCGACTAAATATACT +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDCRIQM*SPTKYT
Trigger: AGTATATTTAGTCGGAGAGCACATCTGTATGCGACA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACAAAGGCTCATATGAGTaGCATTCACTTAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDKGSYE*HSLNSS
Trigger: AGAGCTGTTAAGTGAATGGCACTCATATGAGCCTTT...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS-3UTR CCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACCTTTTTACGCTCAGCTaGCATTATGTGACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNLFTLS*HYVTQD
Trigger: GTCCTGGGTCACATAATGCCAGCTGAGCGTAAAAAG...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCTTGATATCGTCTTTTaGCCTCTCCTTGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFLDIVF*PLLAAH
Trigger: GTGAGCAGCAAGGAGAGGCCAAAAGACGATATCAAG...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGGAAGAAGTTTTCCTCTaGTCGGCTGTCCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKEEVFL*SAVRSI
Trigger: AATGCTCCGGACAGCCGACCAGAGGAAAACTTCTTC...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACACTCTTTACTTTCCTTaGTACAAGTCCAGCAATATC +
Preference number: 4 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHTLYFP*YKSSNI
Trigger: GATATTGCTGGACTTGTACCAAGGAAAGTAAAGAGT...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCTTGAGGAAGATCTaGCATATTTTCATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSVLRKI*HIFIQK
Trigger: CTTTTGGATGAAAATATGCCAGATCTTCCTCAAGAC...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAGGCCCATGTTCTTCTaGTGTTGGTTTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQRPMFF*CWFVLR
Trigger: CCTCAAGACAAACCAACACCAGAAGAACATGGGCCT...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATGTCCTGCTAAGAGGTTaGCTACACAATGAATACTAT +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNVLLRG*LHNEYY
Trigger: ATAGTATTCATTGTGTAGCCAACCTCTTAGCAGGAC...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCGAAAAGATGCTCAGGTaGGTCCAGGGAACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSEKMLR*VQGTWR
Trigger: TCTCCAAGTTCCCTGGACCCACCTGAGCATCTTTTC...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTCAATAGGAAATGGATaGTCTTTTGTCCAAACCTCC +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDSIGNG*SFVQTS
Trigger: GGAGGTTTGGACAAAAGACCATCCATTTCCTATTGA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGACGATTGGTGTTTGCTaGAGCTGGGCGCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKTIGVC*SWALCK
Trigger: CTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGT...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGGGCTTGTTCCGGTGTTaGCAGAGGCTGGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKGLFRC*QRLVFL
Trigger: CAGAAACACCAGCCTCTGCCAACACCGGAACAAGCC...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTATCTTCTTCCAACGTaGGATGTTCAATTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAYLLPT*DVQFRD
Trigger: GTCTCTGAATTGAACATCCCACGTTGGAAGAAGATA...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATCAAATCATCGGGACTTaGTACCTCCTTATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNQIIGT*YLLILL
Trigger: AAGGAGAATAAGGAGGTATCAAGTCCCGATGATTTG...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATGAGAATTACAGAGTTTaGTCTTTGGTCTTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNENYRV*SLVLAV
Trigger: AACTGCTAAGACCAAAGATCAAACTCTGTAATTCTC...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACGAGAATTACAGAGTTTaGTCTTTGGTCTTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDENYRV*SLVLAV
Trigger: AACTGCTAAGACCAAAGATCAAACTCTGTAATTCTC...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCAGTCTTGTACCTGCCTaGTGGATTCTTCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFSLVPA*WILPEN
Trigger: ATTCTCTGGAAGAATCCATCAGGCAGGTACAAGACT...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACTTTCATCTGAGCAGCTaGTTCTTCTTCTTGCTGACG +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNFHLSS*FFFLLT
Trigger: CGTCAGCAAGAAGAAGAAGCAGCTGCTCAGATGAAA...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAGAGCATTTTGGTTTTTaGTACGAAGTTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: VSTALIQLLEDSTNHNIREHFGF*YEVPFL
Trigger: TAAGAAAGGAACTTCGTAGCAAAAACCAAAATGCTC...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTTGTGTTCATGTTCATaGAAAAATCCATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDLCSCS*KNPLLP
Trigger: AGGCAGCAATGGATTTTTGCATGAACATGAACACAA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACATGTCTCCAGCAGGGTaGATGCCATTTCAATATGGT +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNMSPAG*MPFQYG
Trigger: ACCATATTGAAATGGCATGCACCCTGCTGGAGACAT...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCATGTCTCCAGCAGGGTaGATGCCATTTCAATATGGT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFMSPAG*MPFQYG
Trigger: ACCATATTGAAATGGCATGCACCCTGCTGGAGACAT...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGTGGAGCTGGGCGCTGTaGAAGAGACTGCAACATTTC +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKWSWAL*KRLQHF
Trigger: GAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCA...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCCCTGATGAAGCTGAATaGATTCTTCTTTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LTLARFPLQKAFSALSGSPDEAE*ILLFLS
Trigger: TGAAAGAAAAAGAAGAATCCATTCAGCTTCATCAGG...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACCTGTCCGGAGCATTTTaGTTTTTGCTACGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNLSGAF*FLLRSS
Trigger: GGAACTTCGTAGCAAAAACCAAAATGCTCCGGACAG...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGGGGCTGTTGTTTCTCTaGACTAATTATCTCACTAGG +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQGLLFL*TNYLTR
Trigger: CCTAGTGAGATAATTAGTCCAGAGAAACAACAGCCC...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACGTCTTGAGGAAGATCTaGCATATTTTCATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDVLRKI*HIFIQK
Trigger: CTTTTGGATGAAAATATGCCAGATCTTCCTCAAGAC...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCGATGAGATCCAGTGCTaGCTTCCTCATCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFDEIQC*LPHLLV
Trigger: AACAAGAAGATGAGGAAGCCAGCACTGGATCTCATC...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATTCCGGACATATTCCTaGAGAGGAGGACGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQFRTYS*RGGRFF
Trigger: AAAGAAACGTCCTCCTCTCCAGGAATATGTCCGGAA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATCCCTGTTCTTGGGCTaGTATCACTTTTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQSLFLG*YHFSKP
Trigger: TGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCGAAGCTGGTGAAGATTaGGCAGCATTTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFEAGED*AAFPCE
Trigger: TTCACATGGAAATGCTGCCCAATCTTCACCAGCTTC...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
3UTR CAA 72 bp ATGATACTTACAATGGGCTCACCTAGATCCCTGTTCTaGGGCTGGTATCACTTTTCTAAGCCATCTGAATTA +
Preference number: 4 (lower is better)
Translates to: MILTMGSPRSLF*GWYHFSKPSEL
Trigger: TAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCATTGTAAGTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAGACCTTCCTTGTCAGTaGAAATCCCAACTATTGTCA +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQDLPCQ*KSQLLS
Trigger: TGACAATAGTTGGGATTTTCACTGACAAGGAAGGTC...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACCAAATCATCGGGACTTaGTACCTCCTTATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNQIIGT*YLLILL
Trigger: AAGGAGAATAAGGAGGTATCAAGTCCCGATGATTTG...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGGAGATTCTGGAGATCTaGAAAGAAACCGTCCACATG +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKEILEI*KETVHM
Trigger: CATGTGGACGGTTTCTTTTCAGATCTCCAGAATCTC...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGACACTGGTCCTCAGGTaGGATTCTGGAGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKTLVLR*DSGDLK
Trigger: TTTCAGATCTCCAGAATCTCACCTGAGGACCAGTGT...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCATTCTCTACCATTGTaGCGTATCTCGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFHSLPL*RISHQD
Trigger: ATCTTGATGCGAGATACGTCACAATGGTAGAGAATG...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGCTTTTCTTGTTAACATaGCAAACGGCATTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQLFLLT*QTALCL
Trigger: CAGACACAATGCCGTTTGTCATGTTAACAAGAAAAG...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGTTCGTTCGTTTTCTGTaGCATGTTGACGGGCATGTT +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKFVRFL*HVDGHV
Trigger: AACATGCCCGTCAACATGTCACAGAAAACGAACGAA...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGGAGGCTGTAAACCCATaGAGGTCAACAAAATATTCT +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQEAVNP*RSTKYS
Trigger: AGAATATTTTGTTGACCTTCATGGGTTTACAGCCTC...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGTTTCATCTGAGCAGCTaGTTCTTCTTCTTGCTGACG +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKFHLSS*FFFLLT
Trigger: CGTCAGCAAGAAGAAGAAGCAGCTGCTCAGATGAAA...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCTCAGACATGCAGGGATaGAATGTAGCAACCAATCTT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFSDMQG*NVATNL
Trigger: AAGATTGGTTGCTACATTGCATCCCTGCATGTCTGA...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCCAGCAGGGTGCATaGCATTTCAATATGGTGATG +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKLQQGA*HFNMVM
Trigger: CATCACCATATTGAAATGGCATGCACCCTGCTGGAG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATTATCTCGCATCAAGATaGATTGCTTGCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNYLASR*IACFFL
Trigger: GAGAAAGAAGCAAGCAATGCATCTTGATGCGAGATA...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGTATCTCGCATCAAGATaGATTGCTTGCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQYLASR*IACFFL
Trigger: GAGAAAGAAGCAAGCAATGCATCTTGATGCGAGATA...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTCCAAGTCTTGTACCTaGCTGATGGATTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSSKSCT*LMDSSR
Trigger: TCTGGAAGAATCCATCAGGCAGGTACAAGACTTGGA...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCCTGGTTCCAGTGATTTaGAGCAAGTTGAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSLVPVI*SKLRGH
Trigger: ATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAG...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTATTACAACACTTTATTaGAGCATCGGCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIITTLY*SIGKGQ
Trigger: CTGACCTTTGCCGATGCTGCAATAAAGTGTTGTAAT...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACAGGCCATTAAAATCATaGGACAAGGAGTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNRPLKS*DKESLC
Trigger: ACAGAGAGACTCCTTGTCCCATGATTTTAATGGCCT...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCGTTTTGCTTCCACGATaGAAGCTACAGCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSVLLPR*KLQLLQ
Trigger: TTGCAGAAGCTGTAGCTTCCATCGTGGAAGCAAAAC...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTGGTATCATCTTTGTTaGACTCTTTATTCTGACAAC +
Preference number: 4 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDWYHLC*TLYSDN
Trigger: GTTGTCAGAATAAAGAGTCCAACAAAGATGATACCA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCCCTCAGGTGAGATTCTaGAGATCTGAAAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSPQVRF*RSEKKP
Trigger: CGGTTTCTTTTCAGATCTCCAGAATCTCACCTGAGG...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCCTCTCATTCAATTGCTaGAGGACTCCACTAACCACA +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSLSFNC*RTPLTT
Trigger: TGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAG...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGGAAGCTGGTGAAGATTaGGCAGCATTTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKEAGED*AAFPCE
Trigger: TTCACATGGAAATGCTGCCCAATCTTCACCAGCTTC...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCATTTTTCTTCAAACTTaGGTCGAGGCGGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSIFLQT*VEAAEE
Trigger: TTCTTCAGCCGCCTCGACTCAAGTTTGAAGAAAAAT...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGATTTTTCTTCAAACTTaGGTCGAGGCGGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKIFLQT*VEAAEE
Trigger: TTCTTCAGCCGCCTCGACTCAAGTTTGAAGAAAAAT...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGCTATCAGATCTCGGTTaGCACAGTTGGGTAACTGCT +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKLSDLG*HSWVTA
Trigger: AGCAGTTACCCAACTGTGTCAACCGAGATCTGATAG...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACGAGGCTGTAAACCCATaGAGGTCAACAAAATATTCT +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNEAVNP*RSTKYS
Trigger: AGAATATTTTGTTGACCTTCATGGGTTTACAGCCTC...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTTTGTGTTCATGTTCATaGAAAAATCCATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QHFIAASAKVRFLKLVKILCSCS*KNPLLP
Trigger: AGGCAGCAATGGATTTTTGCATGAACATGAACACAA...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAACGCATCAAGATGCATTaGTTGCTTCTTTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQRIKMH*LLLSHH
Trigger: ATGATGAGAAAGAAGCAAGCAATGCATCTTGATGCG...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACCGCATCAAGATGCATTaGTTGCTTCTTTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNRIKMH*LLLSHH
Trigger: ATGATGAGAAAGAAGCAAGCAATGCATCTTGATGCG...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCGCAACATCTAGTTGGTaGACTTTAACAGATTCACCA +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFATSSW*TLTDSP
Trigger: TGGTGAATCTGTTAAAGTGCACCAACTAGATGTTGC...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGAGCTGGCTTTTGAGATaGAAAGGAATGGCAACATCT +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKSWLLR*KGMATS
Trigger: AGATGTTGCCATTCCTTTGCATCTCAAAAGCCAGCT...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCAGCTGGCTTTTGAGATaGAAAGGAATGGCAACATCT +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSSWLLR*KGMATS
Trigger: AGATGTTGCCATTCCTTTGCATCTCAAAAGCCAGCT...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTGGTTCCAGTGATTTaGAGCAAGTTGAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKLVPVI*SKLRGH
Trigger: ATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCAGGCCATTAAAATCATaGGACAAGGAGTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSRPLKS*DKESLC
Trigger: ACAGAGAGACTCCTTGTCCCATGATTTTAATGGCCT...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGGATGAGATCCAGTGCTaGCTTCCTCATCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKDEIQC*LPHLLV
Trigger: AACAAGAAGATGAGGAAGCCAGCACTGGATCTCATC...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATCAATAGGAAATGGATaGTCTTTTGTCCAAACCTCC +
Preference number: 4 (lower is better)
Translates to: FLTAILKRRLTLARFPLQSIGNG*SFVQTS
Trigger: GGAGGTTTGGACAAAAGACCATCCATTTCCTATTGA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTATGGCAACATCTAGTTaGTGCACTTTAACAGATTCA +
Preference number: 4 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIMATSS*CTLTDS
Trigger: TGAATCTGTTAAAGTGCACCAACTAGATGTTGCCAT...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATATGGCAACATCTAGTTaGTGCACTTTAACAGATTCA +
Preference number: 4 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNMATSS*CTLTDS
Trigger: TGAATCTGTTAAAGTGCACCAACTAGATGTTGCCAT...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACTATCTTCTTCCAACGTaGGATGTTCAATTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNYLLPT*DVQFRD
Trigger: GTCTCTGAATTGAACATCCCACGTTGGAAGAAGATA...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCTCTGAAAATAACAGCTaGTTCCACCATTCGGTAATT +
Preference number: 4 (lower is better)
Translates to: HSQEKINPREISITKGLFSENNS*FHHSVI
Trigger: AATTACCGAATGGTGGAATCAGCTGTTATTTTCAGA...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACGGCAGCATTTCCATGTaGAATGTTACAACTTTACAA +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNGSISM*NVTTLQ
Trigger: TTGTAAAGTTGTAACATTTCACATGGAAATGCTGCC...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGGAGCATTTTGGTTTTTaGTACGAAGTTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQEHFGF*YEVPFL
Trigger: TAAGAAAGGAACTTCGTAGCAAAAACCAAAATGCTC...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGCGCATCAAGATGCATTaGTTGCTTCTTTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKRIKMH*LLLSHH
Trigger: ATGATGAGAAAGAAGCAAGCAATGCATCTTGATGCG...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGTCCAAGTCTTGTACCTaGCTGATGGATTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKSKSCT*LMDSSR
Trigger: TCTGGAAGAATCCATCAGGCAGGTACAAGACTTGGA...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGCCTGATGAAGCTGAATaGATTCTTCTTTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQPDEAE*ILLFLS
Trigger: TGAAAGAAAAAGAAGAATCCATTCAGCTTCATCAGG...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGTGGTATCATCTTTGTTaGACTCTTTATTCTGACAAC +
Preference number: 4 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQWYHLC*TLYSDN
Trigger: GTTGTCAGAATAAAGAGTCCAACAAAGATGATACCA...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGCCTCAGGTGAGATTCTaGAGATCTGAAAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKPQVRF*RSEKKP
Trigger: CGGTTTCTTTTCAGATCTCCAGAATCTCACCTGAGG...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTCAATAGGAAATGGATaGTCTTTTGTCCAAACCTCC +
Preference number: 4 (lower is better)
Translates to: SLPGGLSGIWISFIILLSSIGNG*SFVQTS
Trigger: GGAGGTTTGGACAAAAGACCATCCATTTCCTATTGA...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACATGGCAACATCTAGTTaGTGCACTTTAACAGATTCA +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNMATSS*CTLTDS
Trigger: TGAATCTGTTAAAGTGCACCAACTAGATGTTGCCAT...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGTATCTTCTTCCAACGTaGGATGTTCAATTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKYLLPT*DVQFRD
Trigger: GTCTCTGAATTGAACATCCCACGTTGGAAGAAGATA...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGGAAGCTGGTGAAGATTaGGCAGCATTTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKEAGED*AAFPCE
Trigger: TTCACATGGAAATGCTGCCCAATCTTCACCAGCTTC...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGAGTTCCTTTCTTAAATaGTGTCGTTCCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKSSFLK*CRSQAS
Trigger: GGAAGCTTGGGAACGACATCATTTAAGAAAGGAACT...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGCATTCTCTACCATTGTaGCGTATCTCGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKHSLPL*RISHQD
Trigger: ATCTTGATGCGAGATACGTCACAATGGTAGAGAATG...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTTTTCTTGTTAACATaGCAAACGGCATTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKLFLLT*QTALCL
Trigger: CAGACACAATGCCGTTTGTCATGTTAACAAGAAAAG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGGTTGCAGTAGTAATATaGATTCTCTACCATTGTGAC +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKVAVVI*ILYHCD
Trigger: GTCACAATGGTAGAGAATGCATATTACTACTGCAAC...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACCCTGATGAAGCTGAATaGATTCTTCTTTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNPDEAE*ILLFLS
Trigger: TGAAAGAAAAAGAAGAATCCATTCAGCTTCATCAGG...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR TCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGGAGAATTACAGAGTTTaGTCTTTGGTCTTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKENYRV*SLVLAV
Trigger: AACTGCTAAGACCAAAGATCAAACTCTGTAATTCTC...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGATCTCATTTCTTGACTaGCATTCTCAAGAGAAGATT +
Preference number: 4 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKISFLD*HSQEKI
Trigger: AATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGAT...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGACTCTTTACTTTCCTTaGTACAAGTCCAGCAATATC +
Preference number: 4 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKTLYFP*YKSSNI
Trigger: GATATTGCTGGACTTGTACCAAGGAAAGTAAAGAGT...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGGTCCTGCTAAGAGGTTaGCTACACAATGAATACTAT +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKVLLRG*LHNEYY
Trigger: ATAGTATTCATTGTGTAGCCAACCTCTTAGCAGGAC...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR GCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGGAGCATTTTGGTTTTTaGTACGAAGTTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKEHFGF*YEVPFL
Trigger: TAAGAAAGGAACTTCGTAGCAAAAACCAAAATGCTC...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CCA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGTGGTATCATCTTTGTTaGACTCTTTATTCTGACAAC +
Preference number: 4 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKWYHLC*TLYSDN
Trigger: GTTGTCAGAATAAAGAGTCCAACAAAGATGATACCA...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 90 bp AACAGTCCTGATCGTCTTCCCTGCGGCATGCCGATGCCCTCAGCTTaGCTCTGGGGTGGCGGGTCCGGGGCAAAGGCTCATATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: NSPDRLPCGMPMPSA*LWGGGSGAKAHMSA
Trigger: GGCACTCATATGAGCCTTTGCCCCGGACCCGCCACCCCAGAGTCAAGCTGAGGGCATCGGCATGCCGCAGGGAAGACGATCAGGACTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397053.6
ENST00000460569.1
CDS CCA 90 bp TCGTCTTCCCTGCGGCATGCCGATGCCCTCAGCTTGACTCTGGGGTaGCGGGTCCGGGGCAAAGGCTCATATGAGTGCCATTCACTTAAC +
Preference number: 5 (lower is better)
Translates to: SSSLRHADALSLTLG*RVRGKGSYECHSLN
Trigger: GTTAAGTGAATGGCACTCATATGAGCCTTTGCCCCGGACCCGCCACCCCAGAGTCAAGCTGAGGGCATCGGCATGCCGCAGGGAAGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397053.6
ENST00000460569.1
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTACGGCTTGTTCCGGTGTaGGCAGAGGCTGGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLRLVPV*AEAGVS
Trigger: AGAAACACCAGCCTCTGCCAACACCGGAACAAGCCG...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAAAGGCCTTTTCCGCCTaGTCTGGAAGCGTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLKAFSA*SGSVGL
Trigger: CAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTT...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTCTTTTGGCCTCTCCTaGCTGCTCACTGTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: RPFPPCLEASACSGVGRGSFGLS*LLTVRL
Trigger: AAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAGA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGGCCGCCTCTCACGATaGGTGTTTGCTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLAGRLSR*VFAGAG
Trigger: CCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCC...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTATTCTTGGCAGTGAGCTaGATATCGTCTTTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLFLAVS*ISSFGL
Trigger: GAGGCCAAAAGACGATATCAAGCTCACTGCCAAGAA...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTATCTCGGTTGACACAGTaGGGTAACTGCTGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLSRLTQ*GNCCRK
Trigger: TTTCCTACAGCAGTTACCCAACTGTGTCAACCGAGA...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTCTATCAGATCTCGGTaGACACAGTTGGGTAACTGC +
Preference number: 5 (lower is better)
Translates to: RPFPPCLEASACSGVGRGSIRSR*TQLGNC
Trigger: GCAGTTACCCAACTGTGTCAACCGAGATCTGATAGA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTCTCATCCTCTCTTCTaGTTCTGCCTGTTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: RPFPPCLEASACSGVGRGSHPLF*FCLLLV
Trigger: AACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTACCTAGATCCCTGTTCTaGGGCTGGTATCACTTTTCT +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLPRSLF*GWYHFS
Trigger: AGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGG...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCGCCGATGCCCTCAGCTaGACTCTGGGGTGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAADALS*TLGWRV
Trigger: GACCCGCCACCCCAGAGTCAAGCTGAGGGCATCGGC...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397053.6
CDS GCA 90 bp TCCCTTCGGATGTTGGTAGCGAGGCCGCCTCTCACGATTGGTGTTTaGTGGAGCTGGGCGCTGTGCAAGAGACTGCAACATTTCTTGATA +
Preference number: 5 (lower is better)
Translates to: SLRMLVARPPLTIGV*WSWALCKRLQHFLI
Trigger: TATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCGGCCGCCTCTCACGATaGGTGTTTGCTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLGRLSR*VFAGAG
Trigger: CCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCC...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATGCTCCCTTCGGATGTaGGTAGCGAGGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRCSLRM*VARPPL
Trigger: GAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 90 bp GGCCTTGCTGACCTCCTTCTTGGCAGTGAGCTTGATATCGTCTTTTaGCCTCTCCTTGCTGCTCACTGTCCGCCTTTCACTGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: GLADLLLGSELDIVF*PLLAAHCPPFTAVF
Trigger: AAAGACTGCAGTGAAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAGACGATATCAAGCTCACTGCCAAGAAGGAGGTCAGCAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
ENST00000460569.1
CDS CCA 90 bp CTTCGGATGTTGGTAGCGAGGCCGCCTCTCACGATTGGTGTTTGCTaGAGCTGGGCGCTGTGCAAGAGACTGCAACATTTCTTGATAATC +
Preference number: 5 (lower is better)
Translates to: LRMLVARPPLTIGVC*SWALCKRLQHFLII
Trigger: GATTATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCCTTTTTCTTCCATACTaGCTGGCTTTTTACGCTCAG +
Preference number: 5 (lower is better)
Translates to: RPFPPCLEASACSGVGRGLFLPY*LAFYAQ
Trigger: CTGAGCGTAAAAAGCCAGCAAGTATGGAAGAAAAAG...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTATCGCATCAAGATGCATaGCTTGCTTCTTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLSHQDA*LASFSS
Trigger: TGATGAGAAAGAAGCAAGCAATGCATCTTGATGCGA...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACTGCTCCCTTCGGATGTaGGTAGCGAGGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDCSLRM*VARPPL
Trigger: GAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCA...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTAGGAGCATTTTGGTTTTaGCTACGAAGTTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLGAFWF*LRSSFL
Trigger: AAGAAAGGAACTTCGTAGCAAAAACCAAAATGCTCC...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTACACTCTTTACTTTCCTaGGTACAAGTCCAGCAATAT +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLHSLLS*VQVQQY
Trigger: ATATTGCTGGACTTGTACCAAGGAAAGTAAAGAGTG...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCCACTCTTTACTTTCCTaGGTACAAGTCCAGCAATAT +
Preference number: 5 (lower is better)
Translates to: RPFPPCLEASACSGVGRGHSLLS*VQVQQY
Trigger: ATATTGCTGGACTTGTACCAAGGAAAGTAAAGAGTG...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCATCTCGGTTGACACAGTaGGGTAACTGCTGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLASRLTQ*GNCCRK
Trigger: TTTCCTACAGCAGTTACCCAACTGTGTCAACCGAGA...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCTCATGCAAAAATCCATaGCTGCCTTGTCTATCAGAT +
Preference number: 5 (lower is better)
Translates to: RPFPPCLEASACSGVGRGSCKNP*LPCLSD
Trigger: ATCTGATAGACAAGGCAGCAATGGATTTTTGCATGA...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCTCTCACGATTGGTGTTaGCTGGAGCTGGGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLSHDWC*LELGAV
Trigger: CACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGA...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCATTCTCATCCACTTCTaGTTGTCCTTCGTTCGTTTT +
Preference number: 5 (lower is better)
Translates to: RPFPPCLEASACSGVGRGILIHF*LSFVRF
Trigger: AAAACGAACGAAGGACAACAAGAAGTGGATGAGAAT...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 90 bp ATGTTGGTAGCGAGGCCGCCTCTCACGATTGGTGTTTGCTGGAGCTaGGCGCTGTGCAAGAGACTGCAACATTTCTTGATAATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: MLVARPPLTIGVCWS*ALCKRLQHFLIIFL
Trigger: CAAGAAGATTATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACTCTTTTGGCCTCTCCTaGCTGCTCACTGTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHSFGLS*LLTVRL
Trigger: AAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAGA...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCACTAAGGATTGAGAATTaGCCAGCAGCTTCTGGTAAG +
Preference number: 5 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLALRIEN*PAASGK
Trigger: CTTACCAGAAGCTGCTGGCAAATTCTCAATCCTTAG...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTTGGCAGAGGCTGGTGTTTCTGCCTCCTGGCCCCAGCCTGTCCCAGGTTTATCTTCCTGTTTGCTTTaGTGTTCATGTTCATGCAAA +
Preference number: 5 (lower is better)
Translates to: VLAEAGVSASWPQPVPGLSSCLL*CSCSCK
Trigger: TTTGCATGAACATGAACACAAAAGCAAACAGGAAGA...TAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCGCTGGTTCCAGTGATTaGCAGCAAGTTGAGAGGACA +
Preference number: 5 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCAGSSD*QQVERT
Trigger: TGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGC...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGTGCTCCCTTCGGATGTaGGTAGCGAGGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQCSLRM*VARPPL
Trigger: GAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCA...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGAGGCGTTGACGGGCATGTTTaGTTTTCAATGATACTTACA +
Preference number: 5 (lower is better)
Translates to: RPFPPCLEASACSGVGRGVDGHV*FSMILT
Trigger: TGTAAGTATCATTGAAAACAAAACATGCCCGTCAAC...GCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATCCAGTCTCTTCTTCTaGTCTTCAGGGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRSSLFF*SSGALL
Trigger: CAGCAAGGCCCCTGAAGACAAGAAGAAGAGACTGGA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAAGCTGCTTCTTCTTCTaGCTGACGTTTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRSCFFF*LTFGLL
Trigger: GAGCAGGCCAAACGTCAGCAAGAAGAAGAAGCAGCT...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCAGGCTTCCTCATCTTCTaGTTCTTGTTCATCAAGAAG +
Preference number: 5 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLAGFLIF*FLFIKK
Trigger: CTTCTTGATGAACAAGAACAAGAAGATGAGGAAGCC...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCTTCTCGTTCCAAGTCTaGTACCTGCCTGATGGATTC +
Preference number: 5 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCFSFQV*YLPDGF
Trigger: GAATCCATCAGGCAGGTACAAGACTTGGAACGAGAA...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTCCAGTCTCTTCTTCTaGTCTTCAGGGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSASSLFF*SSGALL
Trigger: CAGCAAGGCCCCTGAAGACAAGAAGAAGAGACTGGA...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCCCAAATCATCGGGACTaGATACCTCCTTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCPNHRD*IPPYSP
Trigger: AGGAGAATAAGGAGGTATCAAGTCCCGATGATTTGG...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAATAGTCTTTCACTTCTaGGTCCTGCCAGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRIVFHF*VLPGQL
Trigger: AAGCTGCCCTGGCAGGACCAAGAAGTGAAAGACTAT...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGTCTCACGATTGGTGTTaGCTGGAGCTGGGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQSHDWC*LELGAV
Trigger: CACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGA...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGGGCCGCCTCTCACGATaGGTGTTTGCTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKGRLSR*VFAGAG
Trigger: CCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCC...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATCTGGAAGCGTCGGCTaGTTCCGGTGTTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQSGSVG*FRCWQR
Trigger: CCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGAAGGCCTTTTCCGCCTaGTCTGGAAGCGTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQKAFSA*SGSVGL
Trigger: CAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTT...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCCTCATCCACTTCTTGTaGTCCTTCGTTCGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCLIHFL*SFVRFL
Trigger: CAGAAAACGAACGAAGGACAACAAGAAGTGGATGAG...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATACAATCTCGAGCCTGTaGTCAACATTAGCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNTISSL*STLAPG
Trigger: ACCCGGGGCTAATGTTGACAACAGGCTCGAGATTGT...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357604.10
CDS CCA 90 bp TCTCATCATTTGCTCCAAAAGTACACTGGTCCTCAGGTGAGATTCTaGAGATCTGAAAAGAAACCGTCCACATGTCTCCAGCAGGGTGCA +
Preference number: 5 (lower is better)
Translates to: SHHLLQKYTGPQVRF*RSEKKPSTCLQQGA
Trigger: TGCACCCTGCTGGAGACATGTGGACGGTTTCTTTTCAGATCTCCAGAATCTCACCTGAGGACCAGTGTACTTTTGGAGCAAATGATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATTCTTGGCAGTGAGCTaGATATCGTCTTTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRFLAVS*ISSFGL
Trigger: GAGGCCAAAAGACGATATCAAGCTCACTGCCAAGAA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCCAAATCATCGGGACTaGATACCTCCTTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: NPREISITKGLFRLVWKRPNHRD*IPPYSP
Trigger: AGGAGAATAAGGAGGTATCAAGTCCCGATGATTTGG...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATCTATCAGATCTCGGTaGACACAGTTGGGTAACTGC +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRSIRSR*TQLGNC
Trigger: GCAGTTACCCAACTGTGTCAACCGAGATCTGATAGA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTAAATCCATTGCTGCCTaGTCTATCAGATCTCGGTTG +
Preference number: 5 (lower is better)
Translates to: NPREISITKGLFRLVWKRKSIAA*SIRSRL
Trigger: CAACCGAGATCTGATAGACAAGGCAGCAATGGATTT...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCGGCTTGTTCCGGTGTTGGCATCTTCCTGTTTGCTTTaGTGTTCATGTTCATGCAAA +
Preference number: 5 (lower is better)
Translates to: TKGLFRLVWKRRLVPVLASSCLL*CSCSCK
Trigger: TTTGCATGAACATGAACACAAAAGCAAACAGGAAGA...TGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATTCTCGTTCCAAGTCTaGTACCTGCCTGATGGATTC +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRFSFQV*YLPDGF
Trigger: GAATCCATCAGGCAGGTACAAGACTTGGAACGAGAA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGCTCTCCTTGGTGTAACTGCACTTTCATTTCCAGATaGTTCTTCTGTTTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PVSSLAQSSPSRSPWCNCTFISR*FFCFSP
Trigger: GGGGCTGAAACAGAAGAACAATCTGGAAATGAAAGT...GCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACGCTGGTTCCAGTGATTaGCAGCAAGTTGAGAGGACA +
Preference number: 5 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDAGSSD*QQVERT
Trigger: TGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGC...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCTTCTTGTTCTGCCTGTaGCTGGTTCCAGTGATTTGC +
Preference number: 5 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLFLFCL*LVPVIC
Trigger: GCAAATCACTGGAACCAGCAACAGGCAGAACAAGAA...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACCGGCTTGTTCCGGTGTaGGCAGAGGCTGGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNRLVPV*AEAGVS
Trigger: AGAAACACCAGCCTCTGCCAACACCGGAACAAGCCG...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCTCATCCACTTCTTGTaGTCCTTCGTTCGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: NPREISITKGLFRLVWKRLIHFL*SFVRFL
Trigger: CAGAAAACGAACGAAGGACAACAAGAAGTGGATGAG...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATGCTGTCCGGAGCATTTaGGTTTTTGCTACGAAGTTC +
Preference number: 5 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNAVRSI*VFATKF
Trigger: GAACTTCGTAGCAAAAACCAAAATGCTCCGGACAGC...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACGCTGTCCGGAGCATTTaGGTTTTTGCTACGAAGTTC +
Preference number: 5 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDAVRSI*VFATKF
Trigger: GAACTTCGTAGCAAAAACCAAAATGCTCCGGACAGC...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACGTGATTTGCAGCAAGTaGAGAGGACATGGGTACATT +
Preference number: 5 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHVICSK*RGHGYI
Trigger: AATGTACCCATGTCCTCTCAACTTGCTGCAAATCAC...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAGTGATTTGCAGCAAGTaGAGAGGACATGGGTACATT +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRVICSK*RGHGYI
Trigger: AATGTACCCATGTCCTCTCAACTTGCTGCAAATCAC...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATTTCTTGTTCTGCCTGTaGCTGGTTCCAGTGATTTGC +
Preference number: 5 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNFLFCL*LVPVIC
Trigger: GCAAATCACTGGAACCAGCAACAGGCAGAACAAGAA...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCACTGCTCTCATTCAATaGCTGGAGGACTCCACTAAC +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSATALIQ*LEDSTN
Trigger: GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGT...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGTCTGGAAGCGTCGGCTaGTTCCGGTGTTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKSGSVG*FRCWQR
Trigger: CCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGA...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 90 bp TGCTTCTTTCTCATCATTTGCTCCAAAAGTACACTGGTCCTCAGGTaGGATTCTGGAGATCTGAAAAGAAACCGTCCACATGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CFFLIICSKSTLVLR*DSGDLKRNRPHVSS
Trigger: GCTGGAGACATGTGGACGGTTTCTTTTCAGATCTCCAGAATCTCACCTGAGGACCAGTGTACTTTTGGAGCAAATGATGAGAAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGTTGCTGACCTCCTTCTaGGCAGTGAGCTTGATATCG +
Preference number: 5 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQLLTSF*AVSLIS
Trigger: CGATATCAAGCTCACTGCCAAGAAGGAGGTCAGCAA...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTTTGCTGACCTCCTTCTaGGCAGTGAGCTTGATATCG +
Preference number: 5 (lower is better)
Translates to: QHFIAASAKVRFLKLVKILLTSF*AVSLIS
Trigger: CGATATCAAGCTCACTGCCAAGAAGGAGGTCAGCAA...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTCAGAGATTTTTAGTTTaGCTTCCACGATGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: NPREISITKGLFRLVWKRQRFLV*LPRWKL
Trigger: TAGCTTCCATCGTGGAAGCAAAACTAAAAATCTCTG...ACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCAAGTTCATTTCCCCCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAAGGAAAGACCTTCCTaGTCAGTGAAAATCCCAACT +
Preference number: 5 (lower is better)
Translates to: SSSFPPHHYHHNPFLLWLKERPS*SVKIPT
Trigger: AGTTGGGATTTTCACTGACAAGGAAGGTCTTTCCTT...GAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCTCCCTTTTCAGGTGTTaGGTCAAAGACGTAAAGTAC +
Preference number: 5 (lower is better)
Translates to: LTLARFPLQKAFSALSGSSLFRC*VKDVKY
Trigger: GTACTTTACGTCTTTGACCAAACACCTGAAAAGGGA...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACTCCCTTTTCAGGTGTTaGGTCAAAGACGTAAAGTAC +
Preference number: 5 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHSLFRC*VKDVKY
Trigger: GTACTTTACGTCTTTGACCAAACACCTGAAAAGGGA...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATCCCTTTTCAGGTGTTaGGTCAAAGACGTAAAGTAC +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRSLFRC*VKDVKY
Trigger: GTACTTTACGTCTTTGACCAAACACCTGAAAAGGGA...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACCTAAGGATTGAGAATTaGCCAGCAGCTTCTGGTAAG +
Preference number: 5 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDLRIEN*PAASGK
Trigger: CTTACCAGAAGCTGCTGGCAAATTCTCAATCCTTAG...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACACCTTAGAGAGATCCTaGTACAAAAGTTTCCGGACA +
Preference number: 5 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHTLERS*YKSFRT
Trigger: TGTCCGGAAACTTTTGTACAAGGATCTCTCTAAGGT...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATATAGTCTTTCACTTCTaGGTCCTGCCAGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNIVFHF*VLPGQL
Trigger: AAGCTGCCCTGGCAGGACCAAGAAGTGAAAGACTAT...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTGCTGGTTCCAGTGATTaGCAGCAAGTTGAGAGGACA +
Preference number: 5 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIAGSSD*QQVERT
Trigger: TGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGC...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGAAGGCCTTTTCCGCCTaGTCTGGAAGCGTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKKAFSA*SGSVGL
Trigger: CAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTT...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAGAACCATCTCATTTCTaGACTGCCATTCTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIREPSHF*TAILKR
Trigger: TCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTC...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 90 bp CAGTTGGGTAACTGCTGTAGGAAAGCATCTACTATGAGCTTGAGATaGGATCCAGTGCTGGCTTCCTCATCTTCTTGTTCTTGTTCATCA +
Preference number: 5 (lower is better)
Translates to: QLGNCCRKASTMSLR*DPVLASSSSCSCSS
Trigger: TGATGAACAAGAACAAGAAGATGAGGAAGCCAGCACTGGATCTCATCTCAAGCTCATAGTAGATGCTTTCCTACAGCAGTTACCCAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 90 bp CAGCTGGAGGTGGGTTGCAGTAGTAATATGCATTCTCTACCATTGTaGCGTATCTCGCATCAAGATGCATTGCTTGCTTCTTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: QLEVGCSSNMHSLPL*RISHQDALLASFSS
Trigger: TGATGAGAAAGAAGCAAGCAATGCATCTTGATGCGAGATACGTCACAATGGTAGAGAATGCATATTACTACTGCAACCCACCTCCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS GCA 90 bp GCATTCTCTACCATTGTGACGTATCTCGCATCAAGATGCATTGCTTaGTTCTTTCTCATCATTTGCTCCAAAAGTACACTGGTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: AFSTIVTYLASRCIA*FFLIICSKSTLVLR
Trigger: CCTGAGGACCAGTGTACTTTTGGAGCAAATGATGAGAAAGAAGCAAGCAATGCATCTTGATGCGAGATACGTCACAATGGTAGAGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 90 bp TGTAGAATGCGCCTGTTTTGTCTCTCAGTATTCTGGAGCTCCCTGTaGTCCCTTTTCAGGTGTTTGGTCAAAGACGTAAAGTACTCTTTT +
Preference number: 5 (lower is better)
Translates to: CRMRLFCLSVFWSSL*SLFRCLVKDVKYSF
Trigger: AAAAGAGTACTTTACGTCTTTGACCAAACACCTGAAAAGGGACCACAGGGAGCTCCAGAATACTGAGAGACAAAACAGGCGCATTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGTCTTTTGGCCTCTCCTaGCTGCTCACTGTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKSFGLS*LLTVRL
Trigger: AAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAGA...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACTTGCTGACCTCCTTCTaGGCAGTGAGCTTGATATCG +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNLLTSF*AVSLIS
Trigger: CGATATCAAGCTCACTGCCAAGAAGGAGGTCAGCAA...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCAGCTGCTTCTTCTTCTaGCTGACGTTTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SLPGGLSGIWISFIILLSSCFFF*LTFGLL
Trigger: GAGCAGGCCAAACGTCAGCAAGAAGAAGAAGCAGCT...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGACAGAGATTTTTAGTTTaGCTTCCACGATGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRQRFLV*LPRWKL
Trigger: TAGCTTCCATCGTGGAAGCAAAACTAAAAATCTCTG...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATTGGTGTTGGTTTGTCTaGAGGAAGATCTGGCATATT +
Preference number: 5 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNWCWFV*RKIWHI
Trigger: AATATGCCAGATCTTCCTCAAGACAAACCAACACCA...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAGATTCTTTTGCCTCTTaGGTATCATCTTTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRDSFAS*VSSLLD
Trigger: GTCCAACAAAGATGATACCAAAGAGGCAAAAGAATC...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGATTCTTTTGCCTCTTaGGTATCATCTTTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: LTLARFPLQKAFSALSGSDSFAS*VSSLLD
Trigger: GTCCAACAAAGATGATACCAAAGAGGCAAAAGAATC...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCGGCTTCCTCATCTTCTaGTTCTTGTTCATCAAGAAG +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAGFLIF*FLFIKK
Trigger: CTTCTTGATGAACAAGAACAAGAAGATGAGGAAGCC...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGTCTCGGTTGACACAGTaGGGTAACTGCTGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQSRLTQ*GNCCRK
Trigger: TTTCCTACAGCAGTTACCCAACTGTGTCAACCGAGA...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCTCATGCAAAAATCCATaGCTGCCTTGTCTATCAGAT +
Preference number: 5 (lower is better)
Translates to: LTLARFPLQKAFSALSGSSCKNP*LPCLSD
Trigger: ATCTGATAGACAAGGCAGCAATGGATTTTTGCATGA...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCACACCATTACCATCACAACCCGTTTCTTCTCTGGCTCAATCATCTCCTTCACCTTCTTTCTCATCATTaGCTCCAAAAGTACACTGGT +
Preference number: 5 (lower is better)
Translates to: PHHYHHNPFLLWLNHLLHLLSHH*LQKYTG
Trigger: ACCAGTGTACTTTTGGAGCAAATGATGAGAAAGAAG...GTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATTCGCATCAAGATGCATaGCTTGCTTCTTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNSHQDA*LASFSS
Trigger: TGATGAGAAAGAAGCAAGCAATGCATCTTGATGCGA...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCACCTTAGAGAGATCCTaGTACAAAAGTTTCCGGACA +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSATLERS*YKSFRT
Trigger: TGTCCGGAAACTTTTGTACAAGGATCTCTCTAAGGT...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATTCTCATCCTCTCTTCTaGTTCTGCCTGTTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNSHPLF*FCLLLV
Trigger: AACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGA...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTTCTCATCCTCTCTTCTaGTTCTGCCTGTTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: QHFIAASAKVRFLKLVKISHPLF*FCLLLV
Trigger: AACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGA...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGCGGCTTGTTCCGGTGTaGGCAGAGGCTGGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKRLVPV*AEAGVS
Trigger: AGAAACACCAGCCTCTGCCAACACCGGAACAAGCCG...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCTTGTCTGGAAGCGTTTTCTGTGACATGTaGACGGGCATGTTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LTLARFPLQKAFSALSGSVFCDM*TGMFCF
Trigger: AAAACAAAACATGCCCGTCAACATGTCACAGAAAAC...GCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS GCA 90 bp CTCAGCTGGCTTTTGAGATGCAAAGGAATGGCAACATCTAGTTGGTaGACTTTAACAGATTCACCACTTCGTTGCTGTAGATTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: LSWLLRCKGMATSSW*TLTDSPLRCCRFSS
Trigger: GCTAGAAAATCTACAGCAACGAAGTGGTGAATCTGTTAAAGTGCACCAACTAGATGTTGCCATTCCTTTGCATCTCAAAAGCCAGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 90 bp CTTTTTCTTTCATCTGAGCAGCTGCTTCTTCTTCTTGCTGACGTTTaGCCTGCTCTTCTTGCTTCTTTCTCTCTTCCTCTTGATGTTTCT +
Preference number: 5 (lower is better)
Translates to: LFLSSEQLLLLLADV*PALLASFSLPLDVS
Trigger: AGAAACATCAAGAGGAAGAGAGAAAGAAGCAAGAAGAGCAGGCCAAACGTCAGCAAGAAGAAGAAGCAGCTGCTCAGATGAAAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACTTCTTGGCAGTGAGCTaGATATCGTCTTTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNFLAVS*ISSFGL
Trigger: GAGGCCAAAAGACGATATCAAGCTCACTGCCAAGAA...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGTCCAGTCTCTTCTTCTaGTCTTCAGGGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKSSLFF*SSGALL
Trigger: CAGCAAGGCCCCTGAAGACAAGAAGAAGAGACTGGA...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCGCTGTCCGGAGCATTTaGGTTTTTGCTACGAAGTTC +
Preference number: 5 (lower is better)
Translates to: HSQEKINPREISITKGLFAVRSI*VFATKF
Trigger: GAACTTCGTAGCAAAAACCAAAATGCTCCGGACAGC...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACCACTCTTTACTTTCCTaGGTACAAGTCCAGCAATAT +
Preference number: 5 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDHSLLS*VQVQQY
Trigger: ATATTGCTGGACTTGTACCAAGGAAAGTAAAGAGTG...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTCCAAATCATCGGGACTaGATACCTCCTTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIPNHRD*IPPYSP
Trigger: AGGAGAATAAGGAGGTATCAAGTCCCGATGATTTGG...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTAAATCCATTGCTGCCTaGTCTATCAGATCTCGGTTG +
Preference number: 5 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIKSIAA*SIRSRL
Trigger: CAACCGAGATCTGATAGACAAGGCAGCAATGGATTT...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGTCCACTGCTCTCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGAATCAAGATGCATTGCTaGCTTCTTTCTCATCATTTG +
Preference number: 5 (lower is better)
Translates to: VSTALIQLLEDSTNHNIRIKMHC*LLSHHL
Trigger: CAAATGATGAGAAAGAAGCAAGCAATGCATCTTGAT...TCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGATAGTCTTTCACTTCTaGGTCCTGCCAGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKIVFHF*VLPGQL
Trigger: AAGCTGCCCTGGCAGGACCAAGAAGTGAAAGACTAT...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATTCTCGTTCCAAGTCTaGTACCTGCCTGATGGATTC +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQFSFQV*YLPDGF
Trigger: GAATCCATCAGGCAGGTACAAGACTTGGAACGAGAA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATCATTTTATCCAGAGCTaGAATGAAGTCCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNHFIQS*NEVLIF
Trigger: GAAGATGAGGACTTCATTCAAGCTCTGGATAAAATG...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCCATTTTATCCAGAGCTaGAATGAAGTCCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAHFIQS*NEVLIF
Trigger: GAAGATGAGGACTTCATTCAAGCTCTGGATAAAATG...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACACTGCTCTCATTCAATaGCTGGAGGACTCCACTAAC +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNTALIQ*LEDSTN
Trigger: GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGT...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATATTCTCATCCACTTCTaGTTGTCCTTCGTTCGTTTT +
Preference number: 5 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNILIHF*LSFVRF
Trigger: AAAACGAACGAAGGACAACAAGAAGTGGATGAGAAT...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACAAAGATGTAATCAAGTaGTCGCATACAGATGTGCTC +
Preference number: 5 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDKDVIK*SHTDVL
Trigger: GAGCACATCTGTATGCGACAACTTGATTACATCTTT...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCAAAGATGTAATCAAGTaGTCGCATACAGATGTGCTC +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAKDVIK*SHTDVL
Trigger: GAGCACATCTGTATGCGACAACTTGATTACATCTTT...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAGATGTGCTCTCCGACTAAATATACTACGCCTGCTGGAAAGCAAACCAAAGACAATTACAACACTTTATaGCAGCATCGGCAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: QMCSPTKYTTPAGKQTKDNYNTL*QHRQRS
Trigger: TGACCTTTGCCGATGCTGCAATAAAGTGTTGTAATT...GTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 90 bp TTCCTCAGCTGGCTTTTGAGATGCAAAGGAATGGCAACATCTAGTTaGTGCACTTTAACAGATTCACCACTTCGTTGCTGTAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: FLSWLLRCKGMATSS*CTLTDSPLRCCRFS
Trigger: AGAAAATCTACAGCAACGAAGTGGTGAATCTGTTAAAGTGCACCAACTAGATGTTGCCATTCCTTTGCATCTCAAAAGCCAGCTGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CAACACTTTATTGCAGCATCGGCAAAGGTCAGATTTCTGAAGCTGGTGAAGATTGGCTTCCTCATCTTCTaGTTCTTGTTCATCAAGAAG +
Preference number: 5 (lower is better)
Translates to: QHFIAASAKVRFLKLVKIGFLIF*FLFIKK
Trigger: CTTCTTGATGAACAAGAACAAGAAGATGAGGAAGCC...AATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCAATAAAGTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTCTATCAGATCTCGGTaGACACAGTTGGGTAACTGC +
Preference number: 5 (lower is better)
Translates to: SLPGGLSGIWISFIILLSSIRSR*TQLGNC
Trigger: GCAGTTACCCAACTGTGTCAACCGAGATCTGATAGA...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAATCCATTGCTGCCTaGTCTATCAGATCTCGGTTG +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQKSIAA*SIRSRL
Trigger: CAACCGAGATCTGATAGACAAGGCAGCAATGGATTT...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TACTGTAGTCCTGGAGCCCCCAAATGTATCTTCTTCCAACGTGGGATGTTCAATAGAGAATTACAGAGTTaGATCTTTGGTCTTAGCAGT +
Preference number: 5 (lower is better)
Translates to: YCSPGAPKCIFFQRGMFNRELQS*IFGLSS
Trigger: ACTGCTAAGACCAAAGATCAAACTCTGTAATTCTCT...ATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCGAATCTTTTGAGTCTTaGTCATTTACTAGGCCTAGT +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAESFES*SFTRPS
Trigger: ACTAGGCCTAGTAAATGACAAAGACTCAAAAGATTC...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATACTTTCATTTCCAGATaGTTCTTCTGTTTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNTFISR*FFCFSP
Trigger: GGGGCTGAAACAGAAGAACAATCTGGAAATGAAAGT...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAGTGATTTGCAGCAAGTaGAGAGGACATGGGTACATT +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQVICSK*RGHGYI
Trigger: AATGTACCCATGTCCTCTCAACTTGCTGCAAATCAC...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGTTCTTGTTCTGCCTGTaGCTGGTTCCAGTGATTTGC +
Preference number: 5 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKFLFCL*LVPVIC
Trigger: GCAAATCACTGGAACCAGCAACAGGCAGAACAAGAA...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCGCCGTTGACGGGCATGTTTaGTTTTCAATGATACTTACA +
Preference number: 5 (lower is better)
Translates to: LKRRLTLARFPLQKAFSAVDGHV*FSMILT
Trigger: TGTAAGTATCATTGAAAACAAAACATGCCCGTCAAC...GGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS GCA 90 bp ATATGCATTCTCTACCATTGTGACGTATCTCGCATCAAGATGCATTaGTTGCTTCTTTCTCATCATTTGCTCCAAAAGTACACTGGTCCT +
Preference number: 5 (lower is better)
Translates to: ICILYHCDVSRIKMH*LLLSHHLLQKYTGP
Trigger: AGGACCAGTGTACTTTTGGAGCAAATGATGAGAAAGAAGCAAGCAATGCATCTTGATGCGAGATACGTCACAATGGTAGAGAATGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCCTTTTTCTTCCATACTaGCTGGCTTTTTACGCTCAG +
Preference number: 5 (lower is better)
Translates to: HSQEKINPREISITKGLFLFLPY*LAFYAQ
Trigger: CTGAGCGTAAAAAGCCAGCAAGTATGGAAGAAAAAG...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATCTGCAGTCTTTTTCCTaGTTGTTTGGTAAAGAGTCT +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNLQSFS*LFGKES
Trigger: AGACTCTTTACCAAACAACAAGGAAAAAGACTGCAG...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATGGAGCATTTTGGTTTTaGCTACGAAGTTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNGAFWF*LRSSFL
Trigger: AAGAAAGGAACTTCGTAGCAAAAACCAAAATGCTCC...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATCAGAGATTTTTAGTTTaGCTTCCACGATGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNQRFLV*LPRWKL
Trigger: TAGCTTCCATCGTGGAAGCAAAACTAAAAATCTCTG...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATATTCTGGAAGGGCTGTaGTTTCTCTGGACTAATTAT +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNILEGL*FLWTNY
Trigger: ATAATTAGTCCAGAGAAACAACAGCCCTTCCAGAAT...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATGGTGTTGGTTTGTCTaGAGGAAGATCTGGCATATT +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQWCWFV*RKIWHI
Trigger: AATATGCCAGATCTTCCTCAAGACAAACCAACACCA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGCTTCTTTCTCATCATTaGCTCCAAAAGTACACTGGT +
Preference number: 5 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQLLSHH*LQKYTG
Trigger: ACCAGTGTACTTTTGGAGCAAATGATGAGAAAGAAG...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATCGCATCAAGATGCATaGCTTGCTTCTTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQSHQDA*LASFSS
Trigger: TGATGAGAAAGAAGCAAGCAATGCATCTTGATGCGA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACACCTTAGAGAGATCCTaGTACAAAAGTTTCCGGACA +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNTLERS*YKSFRT
Trigger: TGTCCGGAAACTTTTGTACAAGGATCTCTCTAAGGT...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACGAACCATCTCATTTCTaGACTGCCATTCTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNEPSHF*TAILKR
Trigger: TCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTC...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCCTAGATCCCTGTTCTaGGGCTGGTATCACTTTTCT +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKPRSLF*GWYHFS
Trigger: AGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATATTCTCATCCACTTCTaGTTGTCCTTCGTTCGTTTT +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNILIHF*LSFVRF
Trigger: AAAACGAACGAAGGACAACAAGAAGTGGATGAGAAT...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TCATTCAATTGCTGGAGGACTCCACTAACCACAACATCAGATACAGGACCTAATAAAGATGTAATCAAGTaGTCGCATACAGATGTGCTC +
Preference number: 5 (lower is better)
Translates to: SFNCWRTPLTTTSDTGPNKDVIK*SHTDVL
Trigger: GAGCACATCTGTATGCGACAACTTGATTACATCTTT...ATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 90 bp GCACAGCACAGTTCACATCAGAGATTTTTAGTTTTGCTTCCACGATaGAAGCTACAGCTTCTGCAATGTATTTGCTTAAATTTAGGCCAT +
Preference number: 5 (lower is better)
Translates to: AQHSSHQRFLVLLPR*KLQLLQCICLNLGH
Trigger: ATGGCCTAAATTTAAGCAAATACATTGCAGAAGCTGTAGCTTCCATCGTGGAAGCAAAACTAAAAATCTCTGATGTGAACTGTGCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 90 bp AGGAAACAATCAAGTTTTCGTTTACTGGAACCTCTGTCAAAGTACTaGCCACATGTGTCCAGAATAGTGCATACGAGTCTAATTCTGAAA +
Preference number: 5 (lower is better)
Translates to: RKQSSFRLLEPLSKY*PHVSRIVHTSLILK
Trigger: TTTCAGAATTAGACTCGTATGCACTATTCTGGACACATGTGGCCAGTACTTTGACAGAGGTTCCAGTAAACGAAAACTTGATTGTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAATTCTGGAAGGGCTGTaGTTTCTCTGGACTAATTAT +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQILEGL*FLWTNY
Trigger: ATAATTAGTCCAGAGAAACAACAGCCCTTCCAGAAT...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTAAGGATTGAGAATTaGCCAGCAGCTTCTGGTAAG +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKLRIEN*PAASGK
Trigger: CTTACCAGAAGCTGCTGGCAAATTCTCAATCCTTAG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAATCATGCAAAAATCCATaGCTGCCTTGTCTATCAGAT +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQSCKNP*LPCLSD
Trigger: ATCTGATAGACAAGGCAGCAATGGATTTTTGCATGA...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACCTTCTTTCTCATCATTaGCTCCAAAAGTACACTGGT +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNLLSHH*LQKYTG
Trigger: ACCAGTGTACTTTTGGAGCAAATGATGAGAAAGAAG...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCAAACCAAAGACAGCTGTCCTAAGAAATTAACAGATTGTCAGAGAGAATTACAGAGTTaGATCTTTGGTCTTAGCAGT +
Preference number: 5 (lower is better)
Translates to: PAGKQTKDSCPKKLTDCQRELQS*IFGLSS
Trigger: ACTGCTAAGACCAAAGATCAAACTCTGTAATTCTCT...CTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAAGGCCTTTTCGTTTTCTGTGACATGTaGACGGGCATGTTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: HSQEKINPREISITKGLFVFCDM*TGMFCF
Trigger: AAAACAAAACATGCCCGTCAACATGTCACAGAAAAC...GAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCTTGACTGCCATTCTCAAGAGAAGATTAACCCTCGCGAGATTTCCATTACAAAATTACAACACTTTATaGCAGCATCGGCAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: FLTAILKRRLTLARFPLQNYNTL*QHRQRS
Trigger: TGACCTTTGCCGATGCTGCAATAAAGTGTTGTAATT...TTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 90 bp AGGAAAACTCAAATTAAACTTCTCTGCAGCACTCTTTACTTTCCTTaGTACAAGTCCAGCAATATCATCTCCACAATGTCGACAGAAACT +
Preference number: 5 (lower is better)
Translates to: RKTQIKLLCSTLYFP*YKSSNIISTMSTET
Trigger: AGTTTCTGTCGACATTGTGGAGATGATATTGCTGGACTTGTACCAAGGAAAGTAAAGAGTGCTGCAGAGAAGTTTAATTTGAGTTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTTTTTCTTCCATACTaGCTGGCTTTTTACGCTCAG +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKLFLPY*LAFYAQ
Trigger: CTGAGCGTAAAAAGCCAGCAAGTATGGAAGAAAAAG...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCCTGCAGTCTTTTTCCTaGTTGTTTGGTAAAGAGTCT +
Preference number: 5 (lower is better)
Translates to: SLPGGLSGIWISFIILLSLQSFS*LFGKES
Trigger: AGACTCTTTACCAAACAACAAGGAAAAAGACTGCAG...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGAAGGAAAGACCTTCCTaGTCAGTGAAAATCCCAACT +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKKERPS*SVKIPT
Trigger: AGTTGGGATTTTCACTGACAAGGAAGGTCTTTCCTT...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGATTCTGGAAGGGCTGTaGTTTCTCTGGACTAATTAT +
Preference number: 5 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKILEGL*FLWTNY
Trigger: ATAATTAGTCCAGAGAAACAACAGCCCTTCCAGAAT...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACTCTTCCTGTTTGCTTTaGTGTTCATGTTCATGCAAA +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNSSCLL*CSCSCK
Trigger: TTTGCATGAACATGAACACAAAAGCAAACAGGAAGA...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACATCAAGATGCATTGCTaGCTTCTTTCTCATCATTTG +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNIKMHC*LLSHHL
Trigger: CAAATGATGAGAAAGAAGCAAGCAATGCATCTTGAT...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACAGAGAATTACAGAGTTaGATCTTTGGTCTTAGCAGT +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNRELQS*IFGLSS
Trigger: ACTGCTAAGACCAAAGATCAAACTCTGTAATTCTCT...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACGAATCTTTTGAGTCTTaGTCATTTACTAGGCCTAGT +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNESFES*SFTRPS
Trigger: ACTAGGCCTAGTAAATGACAAAGACTCAAAAGATTC...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp CGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGCTCAAGCATTTTATCCAGAGCTaGAATGAAGTCCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: RGMFNSETLKLKSSLKLKHFIQS*NEVLIF
Trigger: GAAGATGAGGACTTCATTCAAGCTCTGGATAAAATG...CTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGGAACCATCTCATTTCTaGACTGCCATTCTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKEPSHF*TAILKR
Trigger: TCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTC...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp ACTTGTTTCCATACTTTGTTTAGAGACAGAGGCTGTAAACCCATGAAGGTCAACGTTGACGGGCATGTTTaGTTTTCAATGATACTTACA +
Preference number: 5 (lower is better)
Translates to: TCFHTLFRDRGCKPMKVNVDGHV*FSMILT
Trigger: TGTAAGTATCATTGAAAACAAAACATGCCCGTCAAC...GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp AGCCTTCCTGGTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCGTTTTCTGTGACATGTaGACGGGCATGTTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: SLPGGLSGIWISFIILLSVFCDM*TGMFCF
Trigger: AAAACAAAACATGCCCGTCAACATGTCACAGAAAAC...GGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGCTCATCCACTTCTTGTaGTCCTTCGTTCGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKLIHFL*SFVRFL
Trigger: CAGAAAACGAACGAAGGACAACAAGAAGTGGATGAG...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS GCA 90 bp TGGACTAATTATCTCACTAGGAGGAAAACTCAAATTAAACTTCTCTaGAGCACTCTTTACTTTCCTTGGTACAAGTCCAGCAATATCATC +
Preference number: 5 (lower is better)
Translates to: WTNYLTRRKTQIKLL*STLYFPWYKSSNII
Trigger: GATGATATTGCTGGACTTGTACCAAGGAAAGTAAAGAGTGCTGCAGAGAAGTTTAATTTGAGTTTTCCTCCTAGTGAGATAATTAGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGAAGGAAAGACCTTCCTaGTCAGTGAAAATCCCAACT +
Preference number: 5 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKKERPS*SVKIPT
Trigger: AGTTGGGATTTTCACTGACAAGGAAGGTCTTTCCTT...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGTGGTGTTGGTTTGTCTaGAGGAAGATCTGGCATATT +
Preference number: 5 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKWCWFV*RKIWHI
Trigger: AATATGCCAGATCTTCCTCAAGACAAACCAACACCA...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGGATTCTTTTGCCTCTTaGGTATCATCTTTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKDSFAS*VSSLLD
Trigger: GTCCAACAAAGATGATACCAAAGAGGCAAAAGAATC...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp TTCCAACGTGGGATGTTCAATTCAGAGACACTGAAACTCAAATCAAGTTTAAAGATCAAGATGCATTGCTaGCTTCTTTCTCATCATTTG +
Preference number: 5 (lower is better)
Translates to: FQRGMFNSETLKLKSSLKIKMHC*LLSHHL
Trigger: CAAATGATGAGAAAGAAGCAAGCAATGCATCTTGAT...CTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS-3UTR CAA 90 bp GTGGATTATCTGGTATTTGGATATCTTTCATCATTTTGTTGTCCTGCATGTAAGAATTACAACACTTTATaGCAGCATCGGCAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VDYLVFGYLSSFCCPACKNYNTL*QHRQRS
Trigger: TGACCTTTGCCGATGCTGCAATAAAGTGTTGTAATT...CTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 72 bp GATCGTCTTCCCTGCGGCATGCCGATGCCCTCAGCTTaGCTCTGGGGTGGCGGGTCCGGGGCAAAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: DRLPCGMPMPSA*LWGGGSGAKAH
Trigger: ATGAGCCTTTGCCCCGGACCCGCCACCCCAGAGTCAAGCTGAGGGCATCGGCATGCCGCAGGGAAGACGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397053.6
ENST00000460569.1
CDS GCA 72 bp AAAACAGTCCTGATCGTCTTCCCTGCGGCATGCCGATaGCCTCAGCTTGACTCTGGGGTGGCGGGTCCGGGG +
Preference number: 6 (lower is better)
Translates to: KTVLIVFPAACR*PQLDSGVAGPG
Trigger: CCCCGGACCCGCCACCCCAGAGTCAAGCTGAGGGCATCGGCATGCCGCAGGGAAGACGATCAGGACTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397053.6
ENST00000460569.1
CDS CCA 72 bp CTGCGGCATGCCGATGCCCTCAGCTTGACTCTGGGGTaGCGGGTCCGGGGCAAAGGCTCATATGAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: LRHADALSLTLG*RVRGKGSYECH
Trigger: ATGGCACTCATATGAGCCTTTGCCCCGGACCCGCCACCCCAGAGTCAAGCTGAGGGCATCGGCATGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397053.6
ENST00000460569.1
CDS CCA 72 bp CCTTCGGATGTTGGTAGCGAGGCCGCCTCTCACGATTaGTGTTTGCTGGAGCTGGGCGCTGTGCAAGAGACT +
Preference number: 6 (lower is better)
Translates to: PSDVGSEAASHD*CLLELGAVQET
Trigger: AGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS GCA 72 bp CGATTAAAAACAGTCCTGATCGTCTTCCCTGCGGCATaGCGATGCCCTCAGCTTGACTCTGGGGTGGCGGGT +
Preference number: 6 (lower is better)
Translates to: RLKTVLIVFPAA*RCPQLDSGVAG
Trigger: ACCCGCCACCCCAGAGTCAAGCTGAGGGCATCGGCATGCCGCAGGGAAGACGATCAGGACTGTTTTTAATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397053.6
ENST00000460569.1
CDS GCA 72 bp GGAAGGAGGCGAGAGGGAAAAGGCCATCCGCGCGACTaGCCGATTAAAAACAGTCCTGATCGTCTTCCCTGC +
Preference number: 6 (lower is better)
Translates to: GRRREGKGHPRD*PIKNSPDRLPC
Trigger: GCAGGGAAGACGATCAGGACTGTTTTTAATCGGGCAGTCGCGCGGATGGCCTTTTCCCTCTCGCCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397053.6
ENST00000460569.1
CDS GCA 72 bp ATGTTGGTAGCGAGGCCGCCTCTCACGATTGGTGTTTaGTGGAGCTGGGCGCTGTGCAAGAGACTGCAACAT +
Preference number: 6 (lower is better)
Translates to: MLVARPPLTIGV*WSWALCKRLQH
Trigger: ATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 72 bp TTGGTAGCGAGGCCGCCTCTCACGATTGGTGTTTGCTaGAGCTGGGCGCTGTGCAAGAGACTGCAACATTTC +
Preference number: 6 (lower is better)
Translates to: LVARPPLTIGVC*SWALCKRLQHF
Trigger: GAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 72 bp TCAGGGGCCTTGCTGACCTCCTTCTTGGCAGTGAGCTaGATATCGTCTTTTGGCCTCTCCTTGCTGCTCACT +
Preference number: 6 (lower is better)
Translates to: SGALLTSFLAVS*ISSFGLSLLLT
Trigger: AGTGAGCAGCAAGGAGAGGCCAAAAGACGATATCAAGCTCACTGCCAAGAAGGAGGTCAGCAAGGCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
ENST00000460569.1
CDS CCA 72 bp GACCTCCTTCTTGGCAGTGAGCTTGATATCGTCTTTTaGCCTCTCCTTGCTGCTCACTGTCCGCCTTTCACT +
Preference number: 6 (lower is better)
Translates to: DLLLGSELDIVF*PLLAAHCPPFT
Trigger: AGTGAAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAGACGATATCAAGCTCACTGCCAAGAAGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
ENST00000460569.1
CDS CAA 90 bp TCTCCTTCCCCACCTCCCAGTGGGGGCCCTTTCCTCAGCTGGCTTTaGAGATGCAAAGGAATGGCAACATCTAGTTGGTGCACTTTAACA +
Preference number: 6 (lower is better)
Translates to: SPSPPPSGGPFLSWL*RCKGMATSSWCTLT
Trigger: TGTTAAAGTGCACCAACTAGATGTTGCCATTCCTTTGCATCTCAAAAGCCAGCTGAGGAAAGGGCCCCCACTGGGAGGTGGGGAAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 72 bp TTTTTCTTCCATACTTGCTGGCTTTTTACGCTCAGCTaGCATTATGTGACCCAGGACAATCAGCGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: FFFHTCWLFTLS*HYVTQDNQRGR
Trigger: CCGGCCGCGCTGATTGTCCTGGGTCACATAATGCCAGCTGAGCGTAAAAAGCCAGCAAGTATGGAAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397053.6
ENST00000460569.1
CDS CAA 90 bp ACCTCCTTCTTGGCAGTGAGCTTGATATCGTCTTTTGGCCTCTCCTaGCTGCTCACTGTCCGCCTTTCACTGCAGTCTTTTTCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: TSFLAVSLISSFGLS*LLTVRLSLQSFSLL
Trigger: CAACAAGGAAAAAGACTGCAGTGAAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAGACGATATCAAGCTCACTGCCAAGAAGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
ENST00000460569.1
CDS CAA 72 bp TTGGCAGTGAGCTTGATATCGTCTTTTGGCCTCTCCTaGCTGCTCACTGTCCGCCTTTCACTGCAGTCTTTT +
Preference number: 6 (lower is better)
Translates to: LAVSLISSFGLS*LLTVRLSLQSF
Trigger: AAAAGACTGCAGTGAAAGGCGGACAGTGAGCAGCAAGGAGAGGCCAAAAGACGATATCAAGCTCACTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
ENST00000460569.1
CDS TCA 72 bp AAGCAGTATTTTTCTTCAAACTTGAGTCGAGGCGGCTaGAGAAGTTTTCCTCTGGTCGGCTGTCCGGAGCAT +
Preference number: 6 (lower is better)
Translates to: KQYFSSNLSRGG*RSFPLVGCPEH
Trigger: ATGCTCCGGACAGCCGACCAGAGGAAAACTTCTTCAGCCGCCTCGACTCAAGTTTGAAGAAAAATACTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 90 bp CGCATCTGTCTCAAAACCTTCTCGGTGGTAACCTTAGAGAGATCCTaGTACAAAAGTTTCCGGACATATTCCTGGAGAGGAGGACGTTTC +
Preference number: 6 (lower is better)
Translates to: RICLKTFSVVTLERS*YKSFRTYSWRGGRF
Trigger: GAAACGTCCTCCTCTCCAGGAATATGTCCGGAAACTTTTGTACAAGGATCTCTCTAAGGTTACCACCGAGAAGGTTTTGAGACAGATGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 72 bp TCATCTGAGCAGCTGCTTCTTCTTCTTGCTGACGTTTaGCCTGCTCTTCTTGCTTCTTTCTCTCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: SSEQLLLLLADV*PALLASFSLPL
Trigger: AAGAGGAAGAGAGAAAGAAGCAAGAAGAGCAGGCCAAACGTCAGCAAGAAGAAGAAGCAGCTGCTCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
ENST00000460569.1
CDS CCA 72 bp TTGCTCCAAAAGTACACTGGTCCTCAGGTGAGATTCTaGAGATCTGAAAAGAAACCGTCCACATGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: LLQKYTGPQVRF*RSEKKPSTCLQ
Trigger: CTGGAGACATGTGGACGGTTTCTTTTCAGATCTCCAGAATCTCACCTGAGGACCAGTGTACTTTTGGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 72 bp AGTGCATACGAGTCTAATTCTGAAAAGATGCTCAGGTaGGTCCAGGGAACTTGGAGAGCCATCAGGATTAAC +
Preference number: 6 (lower is better)
Translates to: SAYESNSEKMLR*VQGTWRAIRIN
Trigger: GTTAATCCTGATGGCTCTCCAAGTTCCCTGGACCCACCTGAGCATCTTTTCAGAATTAGACTCGTATGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 72 bp TTTTTCTTCCATACTTGCTGGCTTTTTACGCTCAGCTaGCATTATGTGACCCAGGACAATCTCGAGCCTGTT +
Preference number: 6 (lower is better)
Translates to: FFFHTCWLFTLS*HYVTQDNLEPV
Trigger: AACAGGCTCGAGATTGTCCTGGGTCACATAATGCCAGCTGAGCGTAAAAAGCCAGCAAGTATGGAAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357604.10
CDS CAA 72 bp ATTGCTGCCTTGTCTATCAGATCTCGGTTGACACAGTaGGGTAACTGCTGTAGGAAAGCATCTACTATGAGC +
Preference number: 6 (lower is better)
Translates to: IAALSIRSRLTQ*GNCCRKASTMS
Trigger: GCTCATAGTAGATGCTTTCCTACAGCAGTTACCCAACTGTGTCAACCGAGATCTGATAGACAAGGCAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 72 bp AACTGCTGTAGGAAAGCATCTACTATGAGCTTGAGATaGGATCCAGTGCTGGCTTCCTCATCTTCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: NCCRKASTMSLR*DPVLASSSSCS
Trigger: AGAACAAGAAGATGAGGAAGCCAGCACTGGATCTCATCTCAAGCTCATAGTAGATGCTTTCCTACAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 72 bp CTCATCATTTGCTCCAAAAGTACACTGGTCCTCAGGTaGGATTCTGGAGATCTGAAAAGAAACCGTCCACAT +
Preference number: 6 (lower is better)
Translates to: LIICSKSTLVLR*DSGDLKRNRPH
Trigger: ATGTGGACGGTTTCTTTTCAGATCTCCAGAATCTCACCTGAGGACCAGTGTACTTTTGGAGCAAATGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 72 bp CAAAAATCCATTGCTGCCTTGTCTATCAGATCTCGGTaGACACAGTTGGGTAACTGCTGTAGGAAAGCATCT +
Preference number: 6 (lower is better)
Translates to: QKSIAALSIRSR*TQLGNCCRKAS
Trigger: AGATGCTTTCCTACAGCAGTTACCCAACTGTGTCAACCGAGATCTGATAGACAAGGCAGCAATGGATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 72 bp CTCAAAACCTTCTCGGTGGTAACCTTAGAGAGATCCTaGTACAAAAGTTTCCGGACATATTCCTGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: LKTFSVVTLERS*YKSFRTYSWRG
Trigger: TCCTCTCCAGGAATATGTCCGGAAACTTTTGTACAAGGATCTCTCTAAGGTTACCACCGAGAAGGTTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 72 bp TTCTGCCTGTTGCTGGTTCCAGTGATTTGCAGCAAGTaGAGAGGACATGGGTACATTAAGGATCTTAAACTG +
Preference number: 6 (lower is better)
Translates to: FCLLLVPVICSK*RGHGYIKDLKL
Trigger: CAGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGCAACAGGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 90 bp TGCATTCTCTACCATTGTGACGTATCTCGCATCAAGATGCATTGCTaGCTTCTTTCTCATCATTTGCTCCAAAAGTACACTGGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: CILYHCDVSRIKMHC*LLSHHLLQKYTGPQ
Trigger: CTGAGGACCAGTGTACTTTTGGAGCAAATGATGAGAAAGAAGCAAGCAATGCATCTTGATGCGAGATACGTCACAATGGTAGAGAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 72 bp AAAAATCCATTGCTGCCTTGTCTATCAGATCTCGGTTaGCACAGTTGGGTAACTGCTGTAGGAAAGCATCTA +
Preference number: 6 (lower is better)
Translates to: KNPLLPCLSDLG*HSWVTAVGKHL
Trigger: TAGATGCTTTCCTACAGCAGTTACCCAACTGTGTCAACCGAGATCTGATAGACAAGGCAGCAATGGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 72 bp GTGGGTTGCAGTAGTAATATGCATTCTCTACCATTGTaGCGTATCTCGCATCAAGATGCATTGCTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: VGCSSNMHSLPL*RISHQDALLAS
Trigger: AGAAGCAAGCAATGCATCTTGATGCGAGATACGTCACAATGGTAGAGAATGCATATTACTACTGCAACCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 72 bp TCAAGTTTTCGTTTACTGGAACCTCTGTCAAAGTACTaGCCACATGTGTCCAGAATAGTGCATACGAGTCTA +
Preference number: 6 (lower is better)
Translates to: SSFRLLEPLSKY*PHVSRIVHTSL
Trigger: TAGACTCGTATGCACTATTCTGGACACATGTGGCCAGTACTTTGACAGAGGTTCCAGTAAACGAAAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 72 bp TGGCTTTTGAGATGCAAAGGAATGGCAACATCTAGTTaGTGCACTTTAACAGATTCACCACTTCGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: WLLRCKGMATSS*CTLTDSPLRCC
Trigger: ACAGCAACGAAGTGGTGAATCTGTTAAAGTGCACCAACTAGATGTTGCCATTCCTTTGCATCTCAAAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 72 bp CTGTCCGCCTTTCACTGCAGTCTTTTTCCTTGTTGTTaGGTAAAGAGTCTTTTTCTTCCATACTTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LSAFHCSLFPCC*VKSLFLPYLLA
Trigger: AGCCAGCAAGTATGGAAGAAAAAGACTCTTTACCAAACAACAAGGAAAAAGACTGCAGTGAAAGGCGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
ENST00000460569.1
CDS CAA 90 bp CTCTTCTTGTTCTGCCTGTTGCTGGTTCCAGTGATTTGCAGCAAGTaGAGAGGACATGGGTACATTAAGGATCTTAAACTGCTGTTTATT +
Preference number: 6 (lower is better)
Translates to: LFLFCLLLVPVICSK*RGHGYIKDLKLLFI
Trigger: AATAAACAGCAGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGCAACAGGCAGAACAAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS GCA 72 bp CTTTTGAGATGCAAAGGAATGGCAACATCTAGTTGGTaGACTTTAACAGATTCACCACTTCGTTGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: LLRCKGMATSSW*TLTDSPLRCCR
Trigger: TCTACAGCAACGAAGTGGTGAATCTGTTAAAGTGCACCAACTAGATGTTGCCATTCCTTTGCATCTCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 72 bp ACCTGCCTGATGGATTCTTCCAGAGAATTACAGAGTTaGATCTTTGGTCTTAGCAGTTCTAGTGTATCACTG +
Preference number: 6 (lower is better)
Translates to: TCLMDSSRELQS*IFGLSSSSVSL
Trigger: CAGTGATACACTAGAACTGCTAAGACCAAAGATCAAACTCTGTAATTCTCTGGAAGAATCCATCAGGCAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 90 bp ATTCCAGATGTTTATCATACAACAAATAACATAGTCTTTCACTTCTaGGTCCTGCCAGGGCAGCTTTCGCATCTGTCTCAAAACCTTCTC +
Preference number: 6 (lower is better)
Translates to: IPDVYHTTNNIVFHF*VLPGQLSHLSQNLL
Trigger: GAGAAGGTTTTGAGACAGATGCGAAAGCTGCCCTGGCAGGACCAAGAAGTGAAAGACTATGTTATTTGTTGTATGATAAACATCTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 72 bp CCACAATGTCGACAGAAACTAATCACTACAGAGACATaGGTGTGGGACTCCCGATCAGCATTAATAATATTT +
Preference number: 6 (lower is better)
Translates to: PQCRQKLITTET*VWDSRSALIIF
Trigger: AAATATTATTAATGCTGATCGGGAGTCCCACACTCATGTCTCTGTAGTGATTAGTTTCTGTCGACATTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS TCA 72 bp CAGGGAACTTGGAGAGCCATCAGGATTAACACCAAATaGGGTAAAAGAATACAGAGTTCTGAAAATAACAGC +
Preference number: 6 (lower is better)
Translates to: QGTWRAIRINTK*GKRIQSSENNS
Trigger: GCTGTTATTTTCAGAACTCTGTATTCTTTTACCTCATTTGGTGTTAATCCTGATGGCTCTCCAAGTTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS GCA 72 bp TATCTCACTAGGAGGAAAACTCAAATTAAACTTCTCTaGAGCACTCTTTACTTTCCTTGGTACAAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: YLTRRKTQIKLL*STLYFPWYKSS
Trigger: GCTGGACTTGTACCAAGGAAAGTAAAGAGTGCTGCAGAGAAGTTTAATTTGAGTTTTCCTCCTAGTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 72 bp GCTTCCACGATGGAAGCTACAGCTTCTGCAATGTATTaGCTTAAATTTAGGCCATTAAAATCATGGGACAAG +
Preference number: 6 (lower is better)
Translates to: ASTMEATASAMY*LKFRPLKSWDK
Trigger: CTTGTCCCATGATTTTAATGGCCTAAATTTAAGCAAATACATTGCAGAAGCTGTAGCTTCCATCGTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 72 bp TACCATTGTGACGTATCTCGCATCAAGATGCATTGCTaGCTTCTTTCTCATCATTTGCTCCAAAAGTACACT +
Preference number: 6 (lower is better)
Translates to: YHCDVSRIKMHC*LLSHHLLQKYT
Trigger: AGTGTACTTTTGGAGCAAATGATGAGAAAGAAGCAAGCAATGCATCTTGATGCGAGATACGTCACAATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CAA 90 bp TTTAGTTTTGCTTCCACGATGGAAGCTACAGCTTCTGCAATGTATTaGCTTAAATTTAGGCCATTAAAATCATGGGACAAGGAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: FSFASTMEATASAMY*LKFRPLKSWDKESL
Trigger: GAGAGACTCCTTGTCCCATGATTTTAATGGCCTAAATTTAAGCAAATACATTGCAGAAGCTGTAGCTTCCATCGTGGAAGCAAAACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6
CDS CCA 72 bp GCAATGTATTTGCTTAAATTTAGGCCATTAAAATCATaGGACAAGGAGTCTCTCTGTTGTTCTGTAATAGTT +
Preference number: 6 (lower is better)
Translates to: AMYLLKFRPLKS*DKESLCCSVIV
Trigger: AACTATTACAGAACAACAGAGAGACTCCTTGTCCCATGATTTTAATGGCCTAAATTTAAGCAAATACATTGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356352.6
ENST00000357604.10
ENST00000397053.6