RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UPB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100024

Ensembl transcript IDs: ENST00000326010.10, ENST00000382760.2, ENST00000415388.5, ENST00000486043.1, ENST00000498140.1

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAAGTGCTCGGTGCCCACTCGATTGATGGCGCAGGTGAAGCAGTaGTTGGCAATGGCTGCGTTTCTGGCCTCGATGGGCCACAGGGAC +
Preference number: 1 (lower is better)
Translates to: GKCSVPTRLMAQVKQ*LAMAAFLASMGHRD
Trigger: GTCCCTGTGGCCCATCGAGGCCAGAAACGCAGCCATTGCCAATCACTGCTTCACCTGCGCCATCAATCGAGTGGGCACCGAGCACTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR GCA 90 bp ATCCCGGCTACGGGACAGCCCAGGAGTCCGGCTGCTGTCAGGGGCTaGCACATAGCTCGAGCCATAAAAGTAGCCAAAGTCCTGGTGAGC +
Preference number: 1 (lower is better)
Translates to: IPATGQPRSPAAVRG*HIARAIKVAKVLVS
Trigger: GCTCACCAGGACTTTGGCTACTTTTATGGCTCGAGCTATGTGGCAGCCCCTGACAGCAGCCGGACTCCTGGGCTGTCCCGTAGCCGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR GCA 90 bp CAACTAGCAGTCCATCCCGGCTACGGGACAGCCCAGGAGTCCGGCTaGTGTCAGGGGCTGCCACATAGCTCGAGCCATAAAAGTAGCCAA +
Preference number: 1 (lower is better)
Translates to: QLAVHPGYGTAQESG*CQGLPHSSSHKSSQ
Trigger: TTGGCTACTTTTATGGCTCGAGCTATGTGGCAGCCCCTGACAGCAGCCGGACTCCTGGGCTGTCCCGTAGCCGGGATGGACTGCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR TCA 90 bp CTGAAGCCGGCTACTCTTTCACGATGGTGGGGCTGTAGTTGGACTTaGCAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCCG +
Preference number: 1 (lower is better)
Translates to: LKPATLSRWWGCSWT*QLRRAPVRTSHTCP
Trigger: CGGGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTACAGCCCCACCATCGTGAAAGAGTAGCCGGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR CCA 90 bp GGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTaGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCG +
Preference number: 1 (lower is better)
Translates to: GENLDMLSLPHLLIH*GRGVFLTPRQALKP
Trigger: CGGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR CCA 90 bp GCAGAGCTGTGGCCAGGCAGCTCCATCAGGGTTTCTCATCCTTGGTaGCTGTCCAGGAGTACCCTAGCCCTGACATGGAGGTTTCCATAT +
Preference number: 1 (lower is better)
Translates to: AELWPGSSIRVSHPW*LSRSTLALTWRFPY
Trigger: ATATGGAAACCTCCATGTCAGGGCTAGGGTACTCCTGGACAGCCACCAAGGATGAGAAACCCTGATGGAGCTGCCTGGCCACAGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR GCA 90 bp GATGGTGGGGCTGTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTaGGTACATCTCATACCTGCCCGTCATCTTGAAGTTCCAGACATC +
Preference number: 1 (lower is better)
Translates to: DGGAVVGLDSFGELP*VHLIPARHLEVPDI
Trigger: GATGTCTGGAACTTCAAGATGACGGGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTACAGCCCCACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR CCA 90 bp GGTCCATTTAAAGGAAGCAGCAGGAAAGTGGGCAGCCCAGTCTGCTaGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGC +
Preference number: 1 (lower is better)
Translates to: GPFKGSSRKVGSPVC*WERGLLSSYLWPLG
Trigger: GCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACTGGGCTGCCCACTTTCCTGCTGCTTCCTTTAAATGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR GCA 90 bp GCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCTaGCTAACCTCAAATCCACCTGCACAAGCAGTACCTGGGCATTTT +
Preference number: 1 (lower is better)
Translates to: ALTLFPLVYGMDSII*LTSNPPAQAVPGHF
Trigger: AAAATGCCCAGGTACTGCTTGTGCAGGTGGATTTGAGGTTAGGCAGATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR GCA 90 bp CCGGAATTGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATaGTCGCTGTCTCGTTCCAGGATGGGAGACACCACCACCATGTCA +
Preference number: 1 (lower is better)
Translates to: PELEITTAVFHKTSP*SLSRSRMGDTTTMS
Trigger: TGACATGGTGGTGGTGTCTCCCATCCTGGAACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCAATTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR CCA 90 bp CCATTTAAAGGAAGCAGCAGGAAAGTGGGCAGCCCAGTCTGCTGGTaGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTG +
Preference number: 1 (lower is better)
Translates to: PFKGSSRKVGSPVCW*ERGLLSSYLWPLGL
Trigger: CAAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACTGGGCTGCCCACTTTCCTGCTGCTTCCTTTAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR GCA 90 bp GATGGTCCATTTAAAGGAAGCAGCAGGAAAGTGGGCAGCCCAGTCTaGTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTT +
Preference number: 1 (lower is better)
Translates to: DGPFKGSSRKVGSPV*WWERGLLSSYLWPL
Trigger: AAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACTGGGCTGCCCACTTTCCTGCTGCTTCCTTTAAATGGACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR TCA 90 bp AATCTCAACCCCACCTCCAACCCGATACTCTGGTTAACTGCTATTTaGGACTTGGCAGGTTGGGCTCTTGCCGTGTTGTTCAGGGACAGG +
Preference number: 1 (lower is better)
Translates to: NLNPTSNPILWLTAI*DLAGWALAVLFRDR
Trigger: CCTGTCCCTGAACAACACGGCAAGAGCCCAACCTGCCAAGTCTCAAATAGCAGTTAACCAGAGTATCGGGTTGGAGGTGGGGTTGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR TCA 90 bp CTTCGCCAGCTTCTGACAGAATCTGGTGGTGGGCCCATCCTCTGCTaGCTCAGCAAATTCTGTCCAAGGAAGCTTCTCTCTCGTACAGAA +
Preference number: 1 (lower is better)
Translates to: LRQLLTESGGGPILC*LSKFCPRKLLSRTE
Trigger: TTCTGTACGAGAGAGAAGCTTCCTTGGACAGAATTTGCTGAGTCAGCAGAGGATGGGCCCACCACCAGATTCTGTCAGAAGCTGGCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR GCA 90 bp CGGTGTGGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTaGCGCTGGTATGAGAGAGTTAAACTTGTATTCAACATGGATGCC +
Preference number: 1 (lower is better)
Translates to: RCGVDLETVSSVTEP*RWYERVKLVFNMDA
Trigger: GGCATCCATGTTGAATACAAGTTTAACTCTCTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACCACACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR CCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTaGTATGAGAGAGTTAAACTTGTATTCAACATGGATGCCGAGGCA +
Preference number: 1 (lower is better)
Translates to: GVDLETVSSVTEPCR*YERVKLVFNMDAEA
Trigger: TGCCTCGGCATCCATGTTGAATACAAGTTTAACTCTCTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR TCA 90 bp GCCATCAGAAAGGGCAGGCTGGAACTCTGGGCACAAACTGATGGCTaGTGGCTAGTCTCGCACATAAATAACTATTGCTGCACCATGCCA +
Preference number: 1 (lower is better)
Translates to: AIRKGRLELWAQTDG*WLVSHINNYCCTMP
Trigger: TGGCATGGTGCAGCAATAGTTATTTATGTGCGAGACTAGCCATCAGCCATCAGTTTGTGCCCAGAGTTCCAGCCTGCCCTTTCTGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR GCA 90 bp ATTACAGAATCTCAACCCCACCTCCAACCCGATACTCTGGTTAACTaGTATTTGAGACTTGGCAGGTTGGGCTCTTGCCGTGTTGTTCAG +
Preference number: 1 (lower is better)
Translates to: ITESQPHLQPDTLVN*YLRLGRLGSCRVVQ
Trigger: CTGAACAACACGGCAAGAGCCCAACCTGCCAAGTCTCAAATAGCAGTTAACCAGAGTATCGGGTTGGAGGTGGGGTTGAGATTCTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR TCA 90 bp CATCTACAAAATACCTTCACAGAAATACCTAGATTAGTGTCTGATTaGATTACTGGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAG +
Preference number: 1 (lower is better)
Translates to: HLQNTFTEIPRLVSD*ITGDCGLAKLTHPK
Trigger: CTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACCAGTAATTCAATCAGACACTAATCTAGGTATTTCTGTGAAGGTATTTTGTAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR TCA 90 bp CACAAATGTACCAATTTGTCACCTAAGCTGGCTTCTGTATTAGGTTaGTTACACCCTCTAGAAACCAAAAACACTAAGGTGTTTTGTTTT +
Preference number: 1 (lower is better)
Translates to: HKCTNLSPKLASVLG*LHPLETKNTKVFCF
Trigger: AAAACAAAACACCTTAGTGTTTTTGGTTTCTAGAGGGTGTAATCAACCTAATACAGAAGCCAGCTTAGGTGACAAATTGGTACATTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR-3UTR GCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCCAGGGACTCGCTGAGTaGTCCTATCGTGGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEAQGLAE*SYRGRG
Trigger: CCCTCGGCCACGATAGGAGCACTCAGCGAGTCCCTG...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR GCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCAGAAGTCACTCCCCATaGCACTCTCCCCCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSARSHSP*HSPPAW
Trigger: CCAGGCAGGGGGAGAGTGGCATGGGGAGTGACTTCT...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR GCA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCAAGAAGTCACTCCCCATaGCACTCTCCCCCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: EGQTVRNSRQALGCCPQARSHSP*HSPPAW
Trigger: CCAGGCAGGGGGAGAGTGGCATGGGGAGTGACTTCT...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR TCA 90 bp GATCTCAGCCCCGTTGATGCTGTACATAAGCCAGTTGAGGGGGTGGTGCCGCCCGGGCCCATCCTCTGCTaGCTCAGCAAATTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: DLSPVDAVHKPVEGVVPPGPILC*LSKFCP
Trigger: TGGACAGAATTTGCTGAGTCAGCAGAGGATGGGCCC...GGGCGGCACCACCCCCTCAACTGGCTTATGTACAGCATCAACGGGGCTGAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR GCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCCGCCAAGCACTGGGCTaGTGTCCTCAGGCAGAATTT +
Preference number: 2 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEARQALG*CPQAEF
Trigger: AAATTCTGCCTGAGGACAGCAGCCCAGTGCTTGGCG...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR GCA 90 bp AGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGAGCGATCCTTCCGAACTaGGTCTGGAACACGGGGTGG +
Preference number: 2 (lower is better)
Translates to: RGVFLTPRQALKPATLSRAILPN*VWNTGW
Trigger: CCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCGC...TCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGTCACCCTCTTCCCACTaGTGTACGGGATGGACAGCA +
Preference number: 2 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLSPSSH*CTGWTA
Trigger: TGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGA...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR CCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGTCTGACAGAATCTGGTaGTGGGCCCATCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLSDRIW*WAHPLL
Trigger: CAGCAGAGGATGGGCCCACCACCAGATTCTGTCAGA...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR TCA 90 bp GCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTGGGCTGGCTCTGGGCTaGGATCTGAAGGTAAAGAAG +
Preference number: 2 (lower is better)
Translates to: AEGAPDSDHSSHKALGQIGLALG*DLKVKK
Trigger: CTTCTTTACCTTCAGATCTCAGCCCAGAGCCAGCCC...AATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR-3UTR GCA 90 bp CGATCCTTCCGAACTGCGTCTGGAACACGGGGTGGCCCAGGTTTCCCTCCATGTCACAAAACATCCCCATaGTCGCTGTCTCGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: RSFRTASGTRGGPGFPPCHKTSP*SLSRSR
Trigger: CCTGGAACGAGACAGCGAGCATGGGGATGTTTTGTG...ACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGCACTTGCTAATCCACTaGGGCAGAGGTGTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLHLLIH*GRGVFL
Trigger: GAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTG...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR CCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGCCCACTCTGGGGATGTaGTTTTTCCTGGTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLPTLGM*FFLVFP
Trigger: GGGAAAGACCAGGAAAAACCACATCCCCAGAGTGGG...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR CAA 90 bp ATGGGCCACAGGGACTCGCTGAGTGCTCCTATCGTGGCCGAGGGGTaGAAGATGATCTCAGCCCCGTTGATGCTGTACATAAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: MGHRDSLSAPIVAEG*KMISAPLMLYISQL
Trigger: CAACTGGCTTATGTACAGCATCAACGGGGCTGAGATCATCTTCAACCCCTCGGCCACGATAGGAGCACTCAGCGAGTCCCTGTGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR TCA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGTTCTTCGCCAGCTTCTaGCAGAATCTGGTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: KPATLANPLGQRCLPHPKFFASF*QNLVVG
Trigger: GCCCACCACCAGATTCTGTCAGAAGCTGGCGAAGAA...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR GCA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCAAACCTCAAATCCACCTaGACAAGCAGTACCTGGGCA +
Preference number: 2 (lower is better)
Translates to: EGQTVRNSRQALGCCPQANLKST*TSSTWA
Trigger: TGCCCAGGTACTGCTTGTGCAGGTGGATTTGAGGTT...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR GCA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACAGACCCACCACAGCCTTaGTGTAGGCTCAGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTDPPQP*CRLRVS
Trigger: AGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTC...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR GCA 90 bp GTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCCGCCAAGCACTGGGCTaGTGTCCTCAGGCAGAATTT +
Preference number: 2 (lower is better)
Translates to: VVGLDSFGELPCVHLIPARQALG*CPQAEF
Trigger: AAATTCTGCCTGAGGACAGCAGCCCAGTGCTTGGCG...GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR GCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGGTTGACTCCACACATTaGAGCCACCTCTACGATAGC +
Preference number: 2 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLVDSTH*SHLYDS
Trigger: GCTATCGTAGAGGTGGCTGCAATGTGTGGAGTCAAC...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp AGTCTGCTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTGGTGGGAGGATTGCTTaGGCCTGGGATCAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: SLLVGERPLKFLPLATWLGGRIA*AWDQGC
Trigger: GCAGCCTTGATCCCAGGCCCAAGCAATCCTCCCACC...AAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR-3UTR TCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCAGTAAGTTGACTCGTTaGAATCACCCACTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEASKLTR*NHPLWG
Trigger: TCCCCAGAGTGGGTGATTTCAACGAGTCAACTTACT...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR GCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGACTATTGCTGCACCATaGCATGGACTACCAACTACC +
Preference number: 2 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLTIAAP*HGLPTT
Trigger: GGTAGTTGGTAGTCCATGGCATGGTGCAGCAATAGT...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR-3UTR GCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCGGTCTTTCCCAGGACTaGTCCGGAATTGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIGLSQD*SGIGDH
Trigger: GTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACC...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp GTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCGGACTGCTCCGGAATTaGAGATCACCACGGCTGTAT +
Preference number: 2 (lower is better)
Translates to: VVGLDSFGELPCVHLIPAGLLRN*RSPRLY
Trigger: ATACAGCCGTGGTGATCTCCAATTCCGGAGCAGTCC...GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp GACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCCGTCATCGGATGTGGTTTTTCCTaGTCTTTCCCAGGACTGCTC +
Preference number: 2 (lower is better)
Translates to: DLTASASSRAYISYLPVIGCGFS*SFPGLL
Trigger: GAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCC...GATGACGGGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR GCA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGCAGACATCATTCACCTaGTGGCAGAGGTTTAGGTCG +
Preference number: 2 (lower is better)
Translates to: KPATLANPLGQRCLPHPKQTSFT*WQRFRS
Trigger: CGACCTAAACCTCTGCCAGCAGGTGAATGATGTCTG...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGCAATGGCTGCGTTTCTaGCCTCGATGGGCCACAGGG +
Preference number: 2 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWQWLRF*PRWATG
Trigger: CCCTGTGGCCCATCGAGGCCAGAAACGCAGCCATTG...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR GCA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACAAACCTCAAATCCACCTaGACAAGCAGTACCTGGGCA +
Preference number: 2 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTNLKST*TSSTWA
Trigger: TGCCCAGGTACTGCTTGTGCAGGTGGATTTGAGGTT...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR CAA 90 bp GAATCTCAACCCCACCTCCAACCCGATACTCTGGTTAACTGCTATTaGAGACTTGGCAGGTTGGGCTCTTGCCGTGTTGTTCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: ESQPHLQPDTLVNCY*RLGRLGSCRVVQGQ
Trigger: CTGTCCCTGAACAACACGGCAAGAGCCCAACCTGCCAAGTCTCAAATAGCAGTTAACCAGAGTATCGGGTTGGAGGTGGGGTTGAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR-3UTR CCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCCTGGACAATGTTATTaGGGAGAACCTGGACATGTT +
Preference number: 2 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDPGQCY*GEPGHV
Trigger: AACATGTCCAGGTTCTCCCCAATAACATTGTCCAGG...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR CCA 90 bp CACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTCCTTGGAGGAGTTGACAAAATGGGCTaGGGGGATAGAACAAGGACA +
Preference number: 2 (lower is better)
Translates to: HLIQTTAVTRLWGRFLGGVDKMG*GDRTRT
Trigger: TGTCCTTGTTCTATCCCCCCAGCCCATTTTGTCAAC...TCCTCCAAGGAATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR-3UTR CCA 90 bp GAATTGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTGACAGAATCTGGTGGTaGGCCCATCCTCTGCTGACT +
Preference number: 2 (lower is better)
Translates to: ELEITTAVFHKTSPCSLSDRIWW*AHPLLT
Trigger: AGTCAGCAGAGGATGGGCCCACCACCAGATTCTGTC...AGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGCACTTGCTAATCCACTaGGGCAGAGGTGTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWHLLIH*GRGVFL
Trigger: GAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTG...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR CCA 90 bp TTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGATGGTGGGGCACTTACTTAGTCAATTaGGAATGGACTTCTGTCACA +
Preference number: 2 (lower is better)
Translates to: FLTPRQALKPATLSRWWGTYLVN*EWTSVT
Trigger: TGTGACAGAAGTCCATTCCCAATTGACTAAGTAAGT...GCCCCACCATCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp ACAATAACTGTGTGGCCAGCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACTTGGGGTTGAATGCGTaGCAAGTAGAAAACAAAGCA +
Preference number: 2 (lower is better)
Translates to: TITVWPAEGAPDSDHSSHLGLNA*QVENKA
Trigger: TGCTTTGTTTTCTACTTGCCACGCATTCAACCCCAA...GTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGCTGGCCACACAGTTATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR-3UTR CCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATATAGTCCATGCTTCCTaGAAACAGATGATGTTGACT +
Preference number: 2 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDIVHAS*KQMMLT
Trigger: AGTCAACATCATCTGTTTCCAGGAAGCATGGACTAT...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR GCA 90 bp CACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTCCTTGGAGGAAAGTTTGGGGTTGAATaGGTGGCAAGTAGAAAACAA +
Preference number: 2 (lower is better)
Translates to: HLIQTTAVTRLWGRFLGGKFGVE*VASRKQ
Trigger: TTGTTTTCTACTTGCCACGCATTCAACCCCAAACTT...TCCTCCAAGGAATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR-3UTR CCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAACTCTCGCCAAGCACTaGGCTGCTGTCCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: VSNLMCKMELNHISRTSRTLAKH*AAVLRQ
Trigger: CTGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGT...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR-3UTR TCA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTACTCTGGGCACAAACTaGTGGCTGATGGCTAGTCTC +
Preference number: 2 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESTLGTN*WLMASL
Trigger: GAGACTAGCCATCAGCCATCAGTTTGTGCCCAGAGT...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR-3UTR TCA 90 bp ACAATAACTGTGTGGCCAGCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACTCTGACTCTAAACCATaGGCATGTAAAACTCTGATA +
Preference number: 2 (lower is better)
Translates to: TITVWPAEGAPDSDHSSHSDSKP*ACKTLI
Trigger: TATCAGAGTTTTACATGCTCATGGTTTAGAGTCAGA...GTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGCTGGCCACACAGTTATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR-3UTR GCA 90 bp TGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTAAAGGGCATAGTCCATaGTTCCTGGAAACAGATGAT +
Preference number: 2 (lower is better)
Translates to: WRSPRLYSTKHPHARCLVKGHSP*FLETDD
Trigger: ATCATCTGTTTCCAGGAAGCATGGACTATGCCCTTT...AACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGCCTGGACAATGTTATTaGGGAGAACCTGGACATGTT +
Preference number: 2 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWPGQCY*GEPGHV
Trigger: AACATGTCCAGGTTCTCCCCAATAACATTGTCCAGG...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR TCA 90 bp TGGGGCAGATTCCTTGGAGGAGATGAAACTGATAGACTGTTTGATGCGTCTAAATACTCTAAGCCTGGGTaGCAGAGTAAGTCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: WGRFLGGDETDRLFDASKYSKPG*QSKSLS
Trigger: AGACAAGGACTTACTCTGTCACCCAGGCTTAGAGTA...TTTAGACGCATCAAACAGTCTATCAGTTTCATCTCCTCCAAGGAATCTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR CAA 90 bp GGCTCTGGGGCAGATTCCTTGGAGGAGATGAAACTGATAGACTGTTaGATGCGTCTAAAACACATTAAGGGAGATTTAGGAATTGATAGA +
Preference number: 2 (lower is better)
Translates to: GSGADSLEEMKLIDC*MRLKHIKGDLGIDR
Trigger: TCTATCAATTCCTAAATCTCCCTTAATGTGTTTTAGACGCATCAAACAGTCTATCAGTTTCATCTCCTCCAAGGAATCTGCCCCAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR-3UTR GCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAATGGACAGCATCATCTaGCTAACCTCAAATCCACCT +
Preference number: 2 (lower is better)
Translates to: VSNLMCKMELNHISRTSRMDSII*LTSNPP
Trigger: AGGTGGATTTGAGGTTAGGCAGATGATGCTGTCCAT...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR-3UTR CCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAACTTACTTAGTCAATTaGGAATGGACTTCTGTCACA +
Preference number: 2 (lower is better)
Translates to: VSNLMCKMELNHISRTSRTYLVN*EWTSVT
Trigger: TGTGACAGAAGTCCATTCCCAATTGACTAAGTAAGT...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR GCA 72 bp GTCCATCCCGGCTACGGGACAGCCCAGGAGTCCGGCTaGTGTCAGGGGCTGCCACATAGCTCGAGCCATAAA +
Preference number: 3 (lower is better)
Translates to: VHPGYGTAQESG*CQGLPHSSSHK
Trigger: TTTATGGCTCGAGCTATGTGGCAGCCCCTGACAGCAGCCGGACTCCTGGGCTGTCCCGTAGCCGGGATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR TCA 72 bp TCGGTGCCCACTCGATTGATGGCGCAGGTGAAGCAGTaGTTGGCAATGGCTGCGTTTCTGGCCTCGATGGGC +
Preference number: 3 (lower is better)
Translates to: SVPTRLMAQVKQ*LAMAAFLASMG
Trigger: GCCCATCGAGGCCAGAAACGCAGCCATTGCCAATCACTGCTTCACCTGCGCCATCAATCGAGTGGGCACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR GCA 72 bp ACGGGACAGCCCAGGAGTCCGGCTGCTGTCAGGGGCTaGCACATAGCTCGAGCCATAAAAGTAGCCAAAGTC +
Preference number: 3 (lower is better)
Translates to: TGQPRSPAAVRG*HIARAIKVAKV
Trigger: GACTTTGGCTACTTTTATGGCTCGAGCTATGTGGCAGCCCCTGACAGCAGCCGGACTCCTGGGCTGTCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR CCA 72 bp TGGCCAGGCAGCTCCATCAGGGTTTCTCATCCTTGGTaGCTGTCCAGGAGTACCCTAGCCCTGACATGGAGG +
Preference number: 3 (lower is better)
Translates to: WPGSSIRVSHPW*LSRSTLALTWR
Trigger: CCTCCATGTCAGGGCTAGGGTACTCCTGGACAGCCACCAAGGATGAGAAACCCTGATGGAGCTGCCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR CCA 72 bp CTGTGGCCAGGCAGCTCCATCAGGGTTTCTCATCCTTaGTGGCTGTCCAGGAGTACCCTAGCCCTGACATGG +
Preference number: 3 (lower is better)
Translates to: LWPGSSIRVSHP*WLSRSTLALTW
Trigger: CCATGTCAGGGCTAGGGTACTCCTGGACAGCCACCAAGGATGAGAAACCCTGATGGAGCTGCCTGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR-3UTR CAA 90 bp CAAATGTTCACCGCGATCCTTCCGAACTGCGTCTGGAACACGGGGTGGCCCAGGAGGACTGCTCCGGAATaGGAGATCACCACGGCTGTA +
Preference number: 3 (lower is better)
Translates to: QMFTAILPNCVWNTGWPRRTAPE*EITTAV
Trigger: TACAGCCGTGGTGATCTCCAATTCCGGAGCAGTCCT...CCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCGCGGTGAACATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CAA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACACTGTACATAAGCCAGTaGAGGGGGTGGTGCCGCCCG +
Preference number: 3 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTLYISQ*RGWCRP
Trigger: CGGGCGGCACCACCCCCTCAACTGGCTTATGTACAG...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CAA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGATCGTGGCCGAGGGGTaGAAGATGATCTCAGCCCCG +
Preference number: 3 (lower is better)
Translates to: KPATLANPLGQRCLPHPKIVAEG*KMISAP
Trigger: CGGGGCTGAGATCATCTTCAACCCCTCGGCCACGAT...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CAA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCATTAAGCCTGCCACACTaGCTAATCCACTGGGGCAGA +
Preference number: 3 (lower is better)
Translates to: EGQTVRNSRQALGCCPQALSLPH*LIHWGR
Trigger: TCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAA...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR CAA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCTTAAGCCTGCCACACTaGCTAATCCACTGGGGCAGA +
Preference number: 3 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEALSLPH*LIHWGR
Trigger: TCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAA...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR CAA 90 bp CACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTCCTTGGAGGAAGGTGGGAGGATTGCTaGGGCCTGGGATCAAGGCTG +
Preference number: 3 (lower is better)
Translates to: HLIQTTAVTRLWGRFLGGRWEDC*GLGSRL
Trigger: CAGCCTTGATCCCAGGCCCAAGCAATCCTCCCACCT...TCCTCCAAGGAATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR GCA 72 bp TTGCCGTGTTGTTCAGGGACAGGGCTAAATAGGCGCTaGACTGATAACTGCCAAGGGGCTCCCTGGCCCATC +
Preference number: 3 (lower is better)
Translates to: LPCCSGTGLNRR*TDNCQGAPWPI
Trigger: GATGGGCCAGGGAGCCCCTTGGCAGTTATCAGTGCAGCGCCTATTTAGCCCTGTCCCTGAACAACACGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR CCA 72 bp GCCTGGATGGTCCATTTAAAGGAAGCAGCAGGAAAGTaGGCAGCCCAGTCTGCTGGTGGGAGAGAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: AWMVHLKEAAGK*AAQSAGGREAS
Trigger: AGAGGCCTCTCTCCCACCAGCAGACTGGGCTGCCCACTTTCCTGCTGCTTCCTTTAAATGGACCATCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR GCA 72 bp GGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTaGTGTCCTCAGGCAGAATTTCTTCCTCAGGGAAAC +
Preference number: 3 (lower is better)
Translates to: GQTVRNSRQALG*CPQAEFLPQGN
Trigger: GTTTCCCTGAGGAAGAAATTCTGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR CCA 72 bp CTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTaGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: LDMLSLPHLLIH*GRGVFLTPRQA
Trigger: TGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR CCA 72 bp CAGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTaGGCTGCTGTCCTCAGGCAGAATTTCTTCCTCAGG +
Preference number: 3 (lower is better)
Translates to: QKGRLSGTLAKH*AAVLRQNFFLR
Trigger: CCTGAGGAAGAAATTCTGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR CCA 72 bp CCTTGGTGGCTGTCCAGGAGTACCCTAGCCCTGACATaGAGGTTTCCATATAGTTCAGCTGCTGGGCCAGTG +
Preference number: 3 (lower is better)
Translates to: PWWLSRSTLALT*RFPYSSAAGPV
Trigger: CACTGGCCCAGCAGCTGAACTATATGGAAACCTCCATGTCAGGGCTAGGGTACTCCTGGACAGCCACCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR-3UTR CAA 90 bp AGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCACCTGGACAATGTTATaGGGGAGAACCTGGACATGT +
Preference number: 3 (lower is better)
Translates to: RRADCQELSPSTGLLSSGTWTML*GRTWTC
Trigger: ACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGT...GCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR TCA 72 bp GCTACTCTTTCACGATGGTGGGGCTGTAGTTGGACTTaGCAGCTTCGGCGAGCTCCCGTGCGTACATCTCAT +
Preference number: 3 (lower is better)
Translates to: ATLSRWWGCSWT*QLRRAPVRTSH
Trigger: ATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTACAGCCCCACCATCGTGAAAGAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR GCA 72 bp GAGATCACCACGGCTGTATTCCACAAAACATCCCCATaGTCGCTGTCTCGTTCCAGGATGGGAGACACCACC +
Preference number: 3 (lower is better)
Translates to: EITTAVFHKTSP*SLSRSRMGDTT
Trigger: GGTGGTGTCTCCCATCCTGGAACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CAA 90 bp GTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCATGATCTCAGCCCCGTaGATGCTGTACATAAGCCAG +
Preference number: 3 (lower is better)
Translates to: VVGLDSFGELPCVHLIPAMISAP*MLYISQ
Trigger: CTGGCTTATGTACAGCATCAACGGGGCTGAGATCAT...GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR GCA 72 bp GCTGTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTaGGTACATCTCATACCTGCCCGTCATCTTGAAGTT +
Preference number: 3 (lower is better)
Translates to: AVVGLDSFGELP*VHLIPARHLEV
Trigger: AACTTCAAGATGACGGGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR CCA 72 bp CATGGTTCTTCGCCAGCTTCTGACAGAATCTGGTGGTaGGCCCATCCTCTGCTGACTCAGCAAATTCTGTCC +
Preference number: 3 (lower is better)
Translates to: HGSSPASDRIWW*AHPLLTQQILS
Trigger: GGACAGAATTTGCTGAGTCAGCAGAGGATGGGCCCACCACCAGATTCTGTCAGAAGCTGGCGAAGAACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR GCA 72 bp CTCTTCCCACTGGTGTACGGGATGGACAGCATCATCTaGCTAACCTCAAATCCACCTGCACAAGCAGTACCT +
Preference number: 3 (lower is better)
Translates to: LFPLVYGMDSII*LTSNPPAQAVP
Trigger: AGGTACTGCTTGTGCAGGTGGATTTGAGGTTAGGCAGATGATGCTGTCCATCCCGTACACCAGTGGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR GCA 72 bp TCTCAACCCCACCTCCAACCCGATACTCTGGTTAACTaGTATTTGAGACTTGGCAGGTTGGGCTCTTGCCGT +
Preference number: 3 (lower is better)
Translates to: SQPHLQPDTLVN*YLRLGRLGSCR
Trigger: ACGGCAAGAGCCCAACCTGCCAAGTCTCAAATAGCAGTTAACCAGAGTATCGGGTTGGAGGTGGGGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR GCA 72 bp TCTGGGGATGTGGTTTTTCCTGGTCTTTCCCAGGACTaGTCCGGAATTGGAGATCACCACGGCTGTATTCCA +
Preference number: 3 (lower is better)
Translates to: SGDVVFPGLSQD*SGIGDHHGCIP
Trigger: TGGAATACAGCCGTGGTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CAA 90 bp GCTTTCTTTCCATCTCCCGAGGTAAACTCGTTCGGGAAGTGCTCGGTGCCCACTTGGAAACAGATGATGTaGACTCCACACATTGCAGCC +
Preference number: 3 (lower is better)
Translates to: AFFPSPEVNSFGKCSVPTWKQMM*TPHIAA
Trigger: GGCTGCAATGTGTGGAGTCAACATCATCTGTTTCCA...AGTGGGCACCGAGCACTTCCCGAACGAGTTTACCTCGGGAGATGGAAAGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR-3UTR CAA 90 bp AGTCTGCTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTGGAACTAGCTCAGTGTaGATGCTGGGGATAATAGCT +
Preference number: 3 (lower is better)
Translates to: SLLVGERPLKFLPLATWLGTSSV*MLGIIA
Trigger: AGCTATTATCCCCAGCATCAACACTGAGCTAGTTCC...AAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR TCA 72 bp GGTTTCACCATGTTGGCCAGGATGGTTTCCATCTCTTaGCCTTGTGATCTGCCCGCCTTGGCTGACACTAAA +
Preference number: 3 (lower is better)
Translates to: GFTMLARMVSIS*PCDLPALADTK
Trigger: TTTAGTGTCAGCCAAGGCGGGCAGATCACAAGGTCAAGAGATGGAAACCATCCTGGCCAACATGGTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR CCA 72 bp GGTTTTTCCTGGTCTTTCCCAGGACTGCTCCGGAATTaGAGATCACCACGGCTGTATTCCACAAAACATCCC +
Preference number: 3 (lower is better)
Translates to: GFSWSFPGLLRN*RSPRLYSTKHP
Trigger: GGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR TCA 72 bp AAGGGCAGGCTGGAACTCTGGGCACAAACTGATGGCTaGTGGCTAGTCTCGCACATAAATAACTATTGCTGC +
Preference number: 3 (lower is better)
Translates to: KGRLELWAQTDG*WLVSHINNYCC
Trigger: GCAGCAATAGTTATTTATGTGCGAGACTAGCCATCAGCCATCAGTTTGTGCCCAGAGTTCCAGCCTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR GCA 72 bp GTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTaGCGCTGGTATGAGAGAGTTAAACTTGTATTCAAC +
Preference number: 3 (lower is better)
Translates to: VDLETVSSVTEP*RWYERVKLVFN
Trigger: GTTGAATACAAGTTTAACTCTCTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR CCA 72 bp CTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTaGTATGAGAGAGTTAAACTTGTATTCAACATGGAT +
Preference number: 3 (lower is better)
Translates to: LETVSSVTEPCR*YERVKLVFNMD
Trigger: ATCCATGTTGAATACAAGTTTAACTCTCTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR-3UTR CAA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGTTTCTAGAACCACTTTaGGCACCAAAATCTGTATCA +
Preference number: 3 (lower is better)
Translates to: KPATLANPLGQRCLPHPKFLEPL*APKSVS
Trigger: TGATACAGATTTTGGTGCCAAAAGTGGTTCTAGAAA...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR CAA 90 bp TGGGGCAGATTCCTTGGAGGAGATGAAACTGATAGACTGTTTGATGCGTCTAAAATAGAAAGTTTGGGGTaGAATGCGTGGCAAGTAGAA +
Preference number: 3 (lower is better)
Translates to: WGRFLGGDETDRLFDASKIESLG*NAWQVE
Trigger: TTCTACTTGCCACGCATTCAACCCCAAACTTTCTAT...TTTAGACGCATCAAACAGTCTATCAGTTTCATCTCCTCCAAGGAATCTGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR CCA 72 bp TTATTGCAAGGAATTGACTTCAGTGATTGTAGGAGCTaGCTAGTCATGTCTAAACTCTGTGAGGCAGGCTAT +
Preference number: 3 (lower is better)
Translates to: LLQGIDFSDCRS*LVMSKLCEAGY
Trigger: ATAGCCTGCCTCACAGAGTTTAGACATGACTAGCCAGCTCCTACAATCACTGAAGTCAATTCCTTGCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR-3UTR CAA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCACCTGGACAATGTTATaGGGGAGAACCTGGACATGT +
Preference number: 3 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTTWTML*GRTWTC
Trigger: ACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGT...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR GCA 72 bp AGAAGCAGAACCAGTAGGGGATATATTGAGATTTATTaGAAGGAATTGACTTCAGTGATTGTAGGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: RSRTSRGYIEIY*KELTSVIVGAG
Trigger: GCCAGCTCCTACAATCACTGAAGTCAATTCCTTGCAATAAATCTCAATATATCCCCTACTGGTTCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
3UTR CCA 72 bp TTAGTGCAACAAATTACCTTCTATGATGATGGAATCTaGTCAGGCAAGTCTGATATCCACAGGACAAGCCAT +
Preference number: 3 (lower is better)
Translates to: LVQQITFYDDGI*SGKSDIHRTSH
Trigger: ATGGCTTGTCCTGTGGATATCAGACTTGCCTGACCAGATTCCATCATCATAGAAGGTAATTTGTTGCACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR TCA 72 bp AATACCTTCACAGAAATACCTAGATTAGTGTCTGATTaGATTACTGGTGACTGTGGCCTAGCTAAGCTGACA +
Preference number: 3 (lower is better)
Translates to: NTFTEIPRLVSD*ITGDCGLAKLT
Trigger: TGTCAGCTTAGCTAGGCCACAGTCACCAGTAATTCAATCAGACACTAATCTAGGTATTTCTGTGAAGGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp AGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCGCTGCGGCGCGGGTCTaGGGTAAACGGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RRADCQELSPSTGLLSSGAAARV*GKRPGR
Trigger: GCGGCCGGGCCGTTTACCTCAGACCCGCGCCGCAGC...GCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp GACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCCGTCATCGCTGCGAGTCAGGACTaGGGCTGTCCCCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: DLTASASSRAYISYLPVIAASQD*GCPPPA
Trigger: GGCGGGAGGGGGACAGCCTCAGTCCTGACTCGCAGC...GATGACGGGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp CGATCCTTCCGAACTGCGTCTGGAACACGGGGTGGCCCAGGTTTCCCTCCATGTACTCAGCGCCCGCCATaGCCACGGTCCGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSFRTASGTRGGPGFPPCTQRPP*PRSASA
Trigger: AGCACTGGCGGACCGTGGCCATGGCGGGCGCTGAGT...ACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp TTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGATGGTGGGGCGTCCATGCCGCTACCTaGGTCGCGCGTTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: FLTPRQALKPATLSRWWGVHAAT*VARSHP
Trigger: GGGGTGGGAACGCGCGACCCAGGTAGCGGCATGGAC...GCCCCACCATCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp CGATCCTTCCGAACTGCGTCTGGAACACGGGGTGGCCCAGGTTTCCCTCCATGTGCCACGGTCCGCCAGTaGTTGTGTCCGCGCACGAAC +
Preference number: 4 (lower is better)
Translates to: RSFRTASGTRGGPGFPPCATVRQ*LCPRTN
Trigger: GTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGC...ACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCGCCCCACGTGCACAATaGGGGGTCGTCTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPAPRAQ*GVVSAA
Trigger: AGCAGCTGAGACGACCCCGCATTGTGCACGTGGGGC...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp AGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGATCCCACCCCCGGCTTTaGGGCCGCTGGAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RGVFLTPRQALKPATLSRSHPRL*GRWSRR
Trigger: CCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGTGGGA...TCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATGGCCCTTGCGGGGGCTaGTTCCAGCAGCAACCGCCG +
Preference number: 4 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDGPCGG*FQQQPP
Trigger: CGGCGGTTGCTGCTGGAACCAGCCCCCGCAAGGGCC...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCCTCCCTCAGCCTGCTaGGTACCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSAPPSAC*VPGTTG
Trigger: GCCTGTAGTCCCAGGTACTCAGCAGGCTGAGGGAGG...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCGGCGGGCAGCCGGGTaGAGGAACCAGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSARRAAG*RNQSVE
Trigger: TTCTACAGACTGGTTCCTTCACCCGGCTGCCCGCCG...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GATCTCAGCCCCGTTGATGCTGTACATAAGCCAGTTGAGGGGGTGGTGCCGCCCGAACTGCCTGCCCTTTaGCCGCAGTGGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: DLSPVDAVHKPVEGVVPPELPAL*PQWEEV
Trigger: CACCTCCTCCCACTGCGGGCAAAGGGCAGGCAGTTC...GGGCGGCACCACCCCCTCAACTGGCTTATGTACAGCATCAACGGGGCTGAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp TTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGATGGTGGGGCTGTCCGCGCACGAACTaGCTGCCCTTTGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FLTPRQALKPATLSRWWGCPRTN*LPFARS
Trigger: ACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACA...GCCCCACCATCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp CGATCCTTCCGAACTGCGTCTGGAACACGGGGTGGCCCAGGTTTCCCTCCATGTAGGACACGTTCCTCTTaGCGCCTCCGCAGCACACGG +
Preference number: 4 (lower is better)
Translates to: RSFRTASGTRGGPGFPPCRTRSS*RLRSTR
Trigger: CCGTGTGCTGCGGAGGCGGCAAGAGGAACGTGTCCT...ACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCACTCAGCGCCCGCCATaGCCACGGTCCGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIITQRPP*PRSASA
Trigger: AGCACTGGCGGACCGTGGCCATGGCGGGCGCTGAGT...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACAGCCCTTTGCCCGCAGTaGGAGGAGGTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTALCPQ*EEVPRP
Trigger: GGGCCTGGGCACCTCCTCCCACTGCGGGCAAAGGGC...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GCGTCTGGAACACGGGGTGGCCCAGGTTTCCCTCCATGTAGTAAGTTGACTCGTGGGTGGGACCGCCCCTaGCCTTTAGCGCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ASGTRGGPGFPPCSKLTRGWDRP*PLALLR
Trigger: CCGAAGGAGCGCTAAAGGCCAGGGGCGGTCCCACCC...ACGAGTCAACTTACTACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCACCCCAAGGCAGGCACTaGAGCCGGCTACTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: EGQTVRNSRQALGCCPQAPQGRH*SRLLFH
Trigger: GTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGG...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCCCCAAGGCAGGCACTaGAGCCGGCTACTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSAPQGRH*SRLLFH
Trigger: GTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGG...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp TTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGATGGTGGGGCCCCAGACAGCTCAAGTaGGGACACGCCACTTCCTCG +
Preference number: 4 (lower is better)
Translates to: FLTPRQALKPATLSRWWGPRQLK*GHATSS
Trigger: CGAGGAAGTGGCGTGTCCTCACTTGAGCTGTCTGGG...GCCCCACCATCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCCGCGCACGAACTGCCTaGCCTTTGCCCGCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIRARTA*PLPAVG
Trigger: TCCCACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCG...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp GCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTTGTCCGCGCACGAACTaGCTGCCCTTTGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: AEGAPDSDHSSHKALGQICPRTN*LPFARS
Trigger: ACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACA...AATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCTCGGGGAGCGGCAGGTaGTTCTCCAAGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEASGSGR*FSKHSS
Trigger: GGAGGAATGCTTGGAGAAGCACCTGCCGCTCCCCGA...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp AGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCGGCAGAGACCTGTTCTaGCACAGGGGCATTTGCGGG +
Preference number: 4 (lower is better)
Translates to: RRADCQELSPSTGLLSSGGRDLF*HRGICG
Trigger: CCCGCAAATGCCCCTGTGGCAGAACAGGTCTCTGCC...GCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCGCCCAGGAGTCCGGCTaGTGTCAGGGGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIAQESG*CQGLPH
Trigger: ATGTGGCAGCCCCTGACAGCAGCCGGACTCCTGGGC...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCGACCCACCACAGCCTTaGTGTAGGCTCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPDPPQP*CRLRVS
Trigger: AGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTC...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCGGTCAGTTGCTCGCCTaGGGTTCCGTGCGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIGQLLA*GSVRLG
Trigger: ACCGAGGCGCACGGAACCGCAGGCGAGCAACTGACC...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GCGTCTGGAACACGGGGTGGCCCAGGTTTCCCTCCATGTAGTAAGTTGACTCGTTCGTCGCGCCTCGGCTaGGAGTCAGGACTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASGTRGGPGFPPCSKLTRSSRLG*ESGLRL
Trigger: CAGCCTCAGTCCTGACTCGCAGCCGAGGCGCGACGA...ACGAGTCAACTTACTACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp TTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGATGGTGGGGCAAAGGATCCGGCGCTTaGCCTTCGCCCCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FLTPRQALKPATLSRWWGKGSGA*PSPLAL
Trigger: AAGGGCAAGGGGCGAAGGGCAAGCGCCGGATCCTTT...GCCCCACCATCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GATCTCAGCCCCGTTGATGCTGTACATAAGCCAGTTGAGGGGGTGGTGCCGCCCCGCTCCTTCGGCACGTaGCAGGACACGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: DLSPVDAVHKPVEGVVPPRSFGT*QDTFLL
Trigger: CAAGAGGAACGTGTCCTGGCACGTGCCGAAGGAGCG...GGGCGGCACCACCCCCTCAACTGGCTTATGTACAGCATCAACGGGGCTGAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GGGCCAGGAGGAGGCAAGAAAGGGCTAACACTGACATCTTCCATAGGGGGAAGTACTCAGCGCCCGCCATaGCCACGGTCCGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GPGGGKKGLTLTSSIGGSTQRPP*PRSASA
Trigger: AGCACTGGCGGACCGTGGCCATGGCGGGCGCTGAGT...ACTTCCCCCTATGGAAGATGTCAGTGTTAGCCCTTTCTTGCCTCCTCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CCA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCAGTCTGGAACACGGGGTaGCCCAGGTTTCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: EGQTVRNSRQALGCCPQAVWNTG*PRFPSM
Trigger: CATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGAC...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GATCTCAGCCCCGTTGATGCTGTACATAAGCCAGTTGAGGGGGTGGTGCCGCCCGTCTGGAACACGGGGTaGCCCAGGTTTCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: DLSPVDAVHKPVEGVVPPVWNTG*PRFPSM
Trigger: CATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGAC...GGGCGGCACCACCCCCTCAACTGGCTTATGTACAGCATCAACGGGGCTGAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCCAATGGCTGCGTTTCTaGCCTCGATGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEAQWLRF*PRWATG
Trigger: CCCTGTGGCCCATCGAGGCCAGAAACGCAGCCATTG...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp AGTCTGCTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTGCCCTTTGCCCGCAGTaGGAGGAGGTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLLVGERPLKFLPLATWLALCPQ*EEVPRP
Trigger: GGGCCTGGGCACCTCCTCCCACTGCGGGCAAAGGGC...AAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp TGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTACCCTGGAGAGGTCGTaGGGGAGTCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: WRSPRLYSTKHPHARCLVTLERS*GSPGRG
Trigger: CCCGCGCCCAGGACTCCCTCACGACCTCTCCAGGGT...AACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGTCGGGGAGCGGCAGGTaGTTCTCCAAGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYESGSGR*FSKHSS
Trigger: GGAGGAATGCTTGGAGAAGCACCTGCCGCTCCCCGA...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GCGTCTGGAACACGGGGTGGCCCAGGTTTCCCTCCATGTAGTAAGTTGACTCGTACGCGCTTCACTTCCTaGAAGTCGGGGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASGTRGGPGFPPCSKLTRTRFTS*KSGSGR
Trigger: CCTGCCGCTCCCCGACTTGCAGGAAGTGAAGCGCGT...ACGAGTCAACTTACTACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCCGCTGCACTGATAACTaGCAAGGGGCTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIRCTDN*QGAPWP
Trigger: GGGCCAGGGAGCCCCTTGGCAGTTATCAGTGCAGCG...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCGTCGCCAAGCTGGAGTaGAGTGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSAVAKLE*SGVISA
Trigger: AGCCGAGATCACACCACTGCACTCCAGCTTGGCGAC...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTAAGCCAGAGGTGAGCTaGCAGGGGCTTGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: AEGAPDSDHSSHKALGQIKPEVS*QGLGPG
Trigger: ACCTGGTCCAAGCCCCTGGCAGCTCACCTCTGGCTT...AATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp ACAATAACTGTGTGGCCAGCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACGTGGGCAGCCCAGTCTaGTGGTGGGAGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TITVWPAEGAPDSDHSSHVGSPV*WWERGL
Trigger: GAGGCCTCTCTCCCACCAGCAGACTGGGCTGCCCAC...GTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGCTGGCCACACAGTTATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGCGGGCACGCGGCGGCTaGACCTCTGTCGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWRARGG*TSVVRS
Trigger: GCTCCGGACGACAGAGGTGCAGCCGCCGCGTGCCCG...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp ATGTGGTTTTTCCTGGTCTTTCCCAGGACTGCTCCGGAATTGGAGATCACCACGCTCCACAGGCGGGACTaGGCGGAGTCGTCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: MWFFLVFPRTAPELEITTLHRRD*AESSRL
Trigger: GAGGCGCGACGACTCCGCGCAGTCCCGCCTGTGGAG...CGTGGTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGGGTGGGAGGATTGCTTaGGCCTGGGATCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYEGGRIA*AWDQGC
Trigger: GCAGCCTTGATCCCAGGCCCAAGCAATCCTCCCACC...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CCA 90 bp GTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCCGGCTTTGGGGCCGCTaGAGCCGAAGGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VVGLDSFGELPCVHLIPARLWGR*SRRSVA
Trigger: AGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCG...GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GAATTGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTGTCGTGAGGGAGTCCTaGGCGCGGGCTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELEITTAVFHKTSPCSLSVVRES*ARAPGG
Trigger: GCCTCCCGGAGCCCGCGCCCAGGACTCCCTCACGAC...AGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
3UTR CAA 72 bp GCTGTGGCCAGGCAGCTCCATCAGGGTTTCTCATCCTaGGTGGCTGTCCAGGAGTACCCTAGCCCTGACATG +
Preference number: 4 (lower is better)
Translates to: AVARQLHQGFSS*VAVQEYPSPDM
Trigger: CATGTCAGGGCTAGGGTACTCCTGGACAGCCACCAAGGATGAGAAACCCTGATGGAGCTGCCTGGCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGAGGGGGATTCTGTTCTaGACCAGCCCCACGTGCACA +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYERGILF*TSPTCT
Trigger: TGTGCACGTGGGGCTGGTTCAGAACAGAATCCCCCT...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp GTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCGGCTGTAGTTGGACTTaGCAGCTTCGGCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VVGLDSFGELPCVHLIPAGCSWT*QLRRAP
Trigger: GGGAGCTCGCCGAAGCTGTCAAGTCCAACTACAGCC...GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp GCTTTCTTTCCATCTCCCGAGGTAAACTCGTTCGGGAAGTGCTCGGTGCCCACTTCGGTTAGCAAGCGATaGGGCACGCCCCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: AFFPSPEVNSFGKCSVPTSVSKR*GTPLHR
Trigger: CCTGTGGAGGGGCGTGCCTCATCGCTTGCTAACCGA...AGTGGGCACCGAGCACTTCCCGAACGAGTTTACCTCGGGAGATGGAAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp ACAATAACTGTGTGGCCAGCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACGAACTGCCTGCCCTTTaGCCGCAGTGGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TITVWPAEGAPDSDHSSHELPAL*PQWEEV
Trigger: CACCTCCTCCCACTGCGGGCAAAGGGCAGGCAGTTC...GTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGCTGGCCACACAGTTATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCCAGCTGCTCCTCCGCTaGTTCAAAGGCATATCCCTG +
Preference number: 4 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEAQLLLR*FKGISL
Trigger: CAGGGATATGCCTTTGAAGCAGCGGAGGAGCAGCTG...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp CACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTCCTTGGAGGAGCCCCACGTGCACAATaGGGGGTCGTCTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLIQTTAVTRLWGRFLGGAPRAQ*GVVSAA
Trigger: AGCAGCTGAGACGACCCCGCATTGTGCACGTGGGGC...TCCTCCAAGGAATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCGTGATTGGCAATGGCTaGGTTTCTGGCCTCGATGGG +
Preference number: 4 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEAVIGNG*VSGLDG
Trigger: CCCATCGAGGCCAGAAACGCAGCCATTGCCAATCAC...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp CAAATGTTCACCGCGATCCTTCCGAACTGCGTCTGGAACACGGGGTGGCCCAGGGTGATTGGCAATGGCTaGGTTTCTGGCCTCGATGGG +
Preference number: 4 (lower is better)
Translates to: QMFTAILPNCVWNTGWPRVIGNG*VSGLDG
Trigger: CCCATCGAGGCCAGAAACGCAGCCATTGCCAATCAC...CCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCGCGGTGAACATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGAGAAGTCACTCCCCATaGCACTCTCCCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KPATLANPLGQRCLPHPKRSHSP*HSPPAW
Trigger: CCAGGCAGGGGGAGAGTGGCATGGGGAGTGACTTCT...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATAGAAGTCACTCCCCATaGCACTCTCCCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDRSHSP*HSPPAW
Trigger: CCAGGCAGGGGGAGAGTGGCATGGGGAGTGACTTCT...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCGCGAATCCAGAGGGTaGCATCCCTTCAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSARESRG*HPFRSK
Trigger: TTTGCTCCTGAAGGGATGGCACCCTCTGGATTCGCG...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCATTCAGCCCTGCCCTCTaGCGCGTGTGTGCAAATATG +
Preference number: 4 (lower is better)
Translates to: EGQTVRNSRQALGCCPQAFSPAL*RVCANM
Trigger: CATATTTGCACACACGCGGCAGAGGGCAGGGCTGAA...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GCTTTCTTTCCATCTCCCGAGGTAAACTCGTTCGGGAAGTGCTCGGTGCCCACTGAGCCGAAGGTCAGTTaGTCGCCTGCGGTTCCGTGC +
Preference number: 4 (lower is better)
Translates to: AFFPSPEVNSFGKCSVPTEPKVS*SPAVPC
Trigger: GCACGGAACCGCAGGCGAGCAACTGACCTTCGGCTC...AGTGGGCACCGAGCACTTCCCGAACGAGTTTACCTCGGGAGATGGAAAGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp TGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTCAGGCTCGGAGTCCATaGCGCTACCTGGGTCGCGCG +
Preference number: 4 (lower is better)
Translates to: WRSPRLYSTKHPHARCLVQARSP*RYLGRA
Trigger: CGCGCGACCCAGGTAGCGGCATGGACTCCGAGCCTG...AACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCGACAGAATCTGGTGGTaGGCCCATCCTCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEADRIWW*AHPLLT
Trigger: AGTCAGCAGAGGATGGGCCCACCACCAGATTCTGTC...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCGACAGAATCTGGTGGTaGGCCCATCCTCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSADRIWW*AHPLLT
Trigger: AGTCAGCAGAGGATGGGCCCACCACCAGATTCTGTC...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp AGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCGCTTCTGACAGAATCTaGTGGTGGGCCCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRADCQELSPSTGLLSSGASDRI*WWAHPL
Trigger: CAGAGGATGGGCCCACCACCAGATTCTGTCAGAAGC...GCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp CCACTCTGGGGATGTGGTTTTTCCTGGTCTTTCCCAGGACTGCTCCGGAATTGGCTTCCGAACTGCGTCTaGAACACGGGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLWGCGFSWSFPGLLRNWLPNCV*NTGWPR
Trigger: CCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAG...CCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCCCCAGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCAGCAGTGATTGGCAATaGCTGCGTTTCTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPSSDWQ*LRFWPR
Trigger: TCGAGGCCAGAAACGCAGCCATTGCCAATCACTGCT...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGACTCTCGCCAAGCACTaGGCTGCTGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KPATLANPLGQRCLPHPKTLAKH*AAVLRQ
Trigger: CTGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGT...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCCTGCTATTTGAGACTTaGCAGGTTGGGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPLLFET*QVGLLP
Trigger: CGGCAAGAGCCCAACCTGCCAAGTCTCAAATAGCAG...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGGAAGCAGCAGGAAAGTaGGCAGCCCAGTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYEEAAGK*AAQSAG
Trigger: ACCAGCAGACTGGGCTGCCCACTTTCCTGCTGCTTC...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGCTGGTCAGGCAAGTCTaGTATCCACAGGACAAGCCA +
Preference number: 4 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLLVRQV*YPQDKP
Trigger: TGGCTTGTCCTGTGGATATCAGACTTGCCTGACCAG...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp CACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTCCTTGGAGGACCCAGACAGCTCAAGTaGGGACACGCCACTTCCTCG +
Preference number: 4 (lower is better)
Translates to: HLIQTTAVTRLWGRFLGGPRQLK*GHATSS
Trigger: CGAGGAAGTGGCGTGTCCTCACTTGAGCTGTCTGGG...TCCTCCAAGGAATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp GGGCCAGGAGGAGGCAAGAAAGGGCTAACACTGACATCTTCCATAGGGGGAAGTGGCCGGGGTTCCTGGTaGTGTGGACGGAGAATCCAT +
Preference number: 4 (lower is better)
Translates to: GPGGGKKGLTLTSSIGGSGRGSW*CGRRIH
Trigger: ATGGATTCTCCGTCCACATCACCAGGAACCCCGGCC...ACTTCCCCCTATGGAAGATGTCAGTGTTAGCCCTTTCTTGCCTCCTCCTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTTGTCCGCGCACGAACTaGCTGCCCTTTGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGCPRTN*LPFARS
Trigger: ACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACA...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp GCTTTCTTTCCATCTCCCGAGGTAAACTCGTTCGGGAAGTGCTCGGTGCCCACTTCGGGGAGCGGCAGGTaGTTCTCCAAGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: AFFPSPEVNSFGKCSVPTSGSGR*FSKHSS
Trigger: GGAGGAATGCTTGGAGAAGCACCTGCCGCTCCCCGA...AGTGGGCACCGAGCACTTCCCGAACGAGTTTACCTCGGGAGATGGAAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp AGTCTGCTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTACGCGCTTCACTTCCTaGAAGTCGGGGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLVGERPLKFLPLATWLTRFTS*KSGSGR
Trigger: CCTGCCGCTCCCCGACTTGCAGGAAGTGAAGCGCGT...AAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTCAGCTGCTCCTCCGCTaGTTCAAAGGCATATCCCTG +
Preference number: 4 (lower is better)
Translates to: AEGAPDSDHSSHKALGQIQLLLR*FKGISL
Trigger: CAGGGATATGCCTTTGAAGCAGCGGAGGAGCAGCTG...AATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp ACAATAACTGTGTGGCCAGCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACCGGGGTCGTCTCAGCTaGTCCTCCGCTGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TITVWPAEGAPDSDHSSHRGRLS*SSAASK
Trigger: CTTTGAAGCAGCGGAGGAGCAGCTGAGACGACCCCG...GTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGCTGGCCACACAGTTATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp ACAATAACTGTGTGGCCAGCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACGGCAGAGACCTGTTCTaGCACAGGGGCATTTGCGGG +
Preference number: 4 (lower is better)
Translates to: TITVWPAEGAPDSDHSSHGRDLF*HRGICG
Trigger: CCCGCAAATGCCCCTGTGGCAGAACAGGTCTCTGCC...GTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGCTGGCCACACAGTTATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGGGTCTTTCCCAGGACTaGTCCGGAATTGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLGLSQD*SGIGDH
Trigger: GTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACC...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCGCTGCTGTCAGGGGCTaGCACATAGCTCGAGCCATA +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIAAVRG*HIARAI
Trigger: TATGGCTCGAGCTATGTGGCAGCCCCTGACAGCAGC...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp GCGTCTGGAACACGGGGTGGCCCAGGTTTCCCTCCATGTAGTAAGTTGACTCGTGCTGCTGTCAGGGGCTaGCACATAGCTCGAGCCATA +
Preference number: 4 (lower is better)
Translates to: ASGTRGGPGFPPCSKLTRAAVRG*HIARAI
Trigger: TATGGCTCGAGCTATGTGGCAGCCCCTGACAGCAGC...ACGAGTCAACTTACTACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCTTCGGCGAGCTCCCGTaGGTACATCTCATACCTGCC +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIFGELP*VHLIPA
Trigger: GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAA...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGACCCACCACAGCCTTaGTGTAGGCTCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KPATLANPLGQRCLPHPKDPPQP*CRLRVS
Trigger: AGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTC...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp GGGCCAGGAGGAGGCAAGAAAGGGCTAACACTGACATCTTCCATAGGGGGAAGTCAGACAACAGCTCGGTaGGTAACAGCAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GPGGGKKGLTLTSSIGGSQTTAR*VTAGRP
Trigger: CGGCCTCCCTGCTGTTACGCACCGAGCTGTTGTCTG...ACTTCCCCCTATGGAAGATGTCAGTGTTAGCCCTTTCTTGCCTCCTCCTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACATCGCCTGCGGTTCCGTaGGCCTCGGTGGAGCTAATA +
Preference number: 4 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTSPAVP*ASVELI
Trigger: TATTAGCTCCACCGAGGCGCACGGAACCGCAGGCGA...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGTTCCACCCCTCACCTaGCCCTTGGTGTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWVPPLT*PLVSGR
Trigger: CCGGCCCGACACCAAGGGGCAGGTGAGGGGTGGAAC...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTCTTCCGAACTGCGTCTaGAACACGGGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGLPNCV*NTGWPR
Trigger: CCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAG...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTAGGATTGCTTGGGCCTaGGATCAAGGCTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: AEGAPDSDHSSHKALGQIRIAWA*DQGCSE
Trigger: CTCACTGCAGCCTTGATCCCAGGCCCAAGCAATCCT...AATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGAGCCCAGTCTGCTGGTaGGAGAGAGGCCTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYESPVCW*ERGLLS
Trigger: ACTTAAGAGGCCTCTCTCCCACCAGCAGACTGGGCT...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CCA 90 bp CAAATGTTCACCGCGATCCTTCCGAACTGCGTCTGGAACACGGGGTGGCCCAGGCGGAGCCTTTATGTCTaGGGAGTTTTAACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: QMFTAILPNCVWNTGWPRRSLYV*GVLTPE
Trigger: CTCGGGGGTTAAAACTCCCCAGACATAAAGGCTCCG...CCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCGCGGTGAACATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp TGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTCTCCAGGGCCTCACGTaGGGAGGGGGCGAAAGGATC +
Preference number: 4 (lower is better)
Translates to: WRSPRLYSTKHPHARCLVLQGLT*GGGERI
Trigger: GATCCTTTCGCCCCCTCCCCACGTGAGGCCCTGGAG...AACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGGCCTTTATGCGTCTATaGAGGGCAGAGACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLAFMRL*RAETCS
Trigger: AGAACAGGTCTCTGCCCTTCATAGACGCATAAAGGC...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATTTCTTCGCCAGCTTCTaGCAGAATCTGGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDFFASF*QNLVVG
Trigger: GCCCACCACCAGATTCTGTCAGAAGCTGGCGAAGAA...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp GTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCGCGCAGGTGAAGCAGTaGTTGGCAATGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: VVGLDSFGELPCVHLIPAAQVKQ*LAMAAF
Trigger: AAACGCAGCCATTGCCAATCACTGCTTCACCTGCGC...GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCACTCTAAGATGGGCCTaGCTGTTCTGTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSATLRWA*LFCFQA
Trigger: TGCCTGGAAACAGAACAGTCAGGCCCATCTTAGAGT...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp TGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTCAGGGACTCGCTGAGTaGTCCTATCGTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: WRSPRLYSTKHPHARCLVQGLAE*SYRGRG
Trigger: CCCTCGGCCACGATAGGAGCACTCAGCGAGTCCCTG...AACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGCCCAGGAGTCCGGCTaGTGTCAGGGGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWAQESG*CQGLPH
Trigger: ATGTGGCAGCCCCTGACAGCAGCCGGACTCCTGGGC...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCGCTCACTGCAGCCTTTaGCTCCCAGATTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSAAHCSL*LPDSSN
Trigger: ATTGCTTGAATCTGGGAGGCAAAGGCTGCAGTGAGC...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCATATGGGCACTTTCCTaGGGTAGGGTGCGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPIWALS*GRVRFK
Trigger: TTTAAAGCGCACCCTACCGCAGGAAAGTGCCCATAT...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCAGGATGTGGTTTTTCCTaGTCTTTCCCAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: EGQTVRNSRQALGCCPQAGCGFS*SFPGLL
Trigger: GAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCC...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCACATCATTCACCTGCTaGCAGAGGTTTAGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEATSFTC*QRFRSS
Trigger: GCTCGACCTAAACCTCTGCCAGCAGGTGAATGATGT...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GATCTCAGCCCCGTTGATGCTGTACATAAGCCAGTTGAGGGGGTGGTGCCGCCCACATCATTCACCTGCTaGCAGAGGTTTAGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: DLSPVDAVHKPVEGVVPPTSFTC*QRFRSS
Trigger: GCTCGACCTAAACCTCTGCCAGCAGGTGAATGATGT...GGGCGGCACCACCCCCTCAACTGGCTTATGTACAGCATCAACGGGGCTGAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGGCTACTCTTTCACGATaGTGGGGCTGTAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLATLSR*WGCSWT
Trigger: AGTCCAACTACAGCCCCACCATCGTGAAAGAGTAGC...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTACTCTCGCCAAGCACTaGGCTGCTGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGTLAKH*AAVLRQ
Trigger: CTGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGT...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGGGGTTCCTGGTGATGTaGACGGAGAATCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYEGFLVM*TENPCF
Trigger: GAAGCATGGATTCTCCGTCCACATCACCAGGAACCC...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCACCTGCCCGTCATCTTaGAGTTCCAGACATCATTCA +
Preference number: 4 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEATCPSS*SSRHHS
Trigger: TGAATGATGTCTGGAACTTCAAGATGACGGGCAGGT...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATACTCTGGGCACAAACTaGTGGCTGATGGCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDTLGTN*WLMASL
Trigger: GAGACTAGCCATCAGCCATCAGTTTGTGCCCAGAGT...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATTCTGGCTGCCTTCTCTaGTTGGGAACAATAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDSGCLL*LGTISG
Trigger: CCCGCTTATTGTTCCCAATCAGAGAAGGCAGCCAGA...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp GGGCCAGGAGGAGGCAAGAAAGGGCTAACACTGACATCTTCCATAGGGGGAAGTGGGCTGGCTCTGGGCTaGGATCTGAAGGTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GPGGGKKGLTLTSSIGGSGLALG*DLKVKK
Trigger: CTTCTTTACCTTCAGATCTCAGCCCAGAGCCAGCCC...ACTTCCCCCTATGGAAGATGTCAGTGTTAGCCCTTTCTTGCCTCCTCCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCGCTTTAAACTGTCACTaGGATGGTAGGAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSAALNCH*DGRSES
Trigger: GCTCTCACTCCTACCATCTCAGTGACAGTTTAAAGC...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp ATCAAGGCTGCAGTGAGCTGTGATTGTACTCTAAGCCTGGGTGACAGAGTAAGTCGCGCACGAACTGCCTaGCCTTTGCCCGCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: IKAAVSCDCTLSLGDRVSRARTA*PLPAVG
Trigger: TCCCACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCG...ACTTACTCTGTCACCCAGGCTTAGAGTACAATCACAGCTCACTGCAGCCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp ATCAAGGCTGCAGTGAGCTGTGATTGTACTCTAAGCCTGGGTGACAGAGTAAGTGCCACGGTCCGCCAGTaGTTGTGTCCGCGCACGAAC +
Preference number: 4 (lower is better)
Translates to: IKAAVSCDCTLSLGDRVSATVRQ*LCPRTN
Trigger: GTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGC...ACTTACTCTGTCACCCAGGCTTAGAGTACAATCACAGCTCACTGCAGCCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGGTTGACTCCACACATTaGAGCCACCTCTACGATAGC +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYEVDSTH*SHLYDS
Trigger: GCTATCGTAGAGGTGGCTGCAATGTGTGGAGTCAAC...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCCGTCATCGTTGACTCCACACATTaGAGCCACCTCTACGATAGC +
Preference number: 4 (lower is better)
Translates to: DLTASASSRAYISYLPVIVDSTH*SHLYDS
Trigger: GCTATCGTAGAGGTGGCTGCAATGTGTGGAGTCAAC...GATGACGGGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACACGCCAAGCACTGGGCTaGTGTCCTCAGGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTRQALG*CPQAEF
Trigger: AAATTCTGCCTGAGGACAGCAGCCCAGTGCTTGGCG...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp ACAATAACTGTGTGGCCAGCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACCCGGTCAGGCGCCCTTaGCTTTATCTCTTACTCTCG +
Preference number: 4 (lower is better)
Translates to: TITVWPAEGAPDSDHSSHPVRRP*LYLLLS
Trigger: CGAGAGTAAGAGATAAAGGCAAGGGCGCCTGACCGG...GTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGCTGGCCACACAGTTATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp CGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTCCAGGATGGGAGCCGGTCAGGCGCCCTTaGCTTTATCTCTTACTCTCG +
Preference number: 4 (lower is better)
Translates to: RLYSTKHPHARCLVPGWEPVRRP*LYLLLS
Trigger: CGAGAGTAAGAGATAAAGGCAAGGGCGCCTGACCGG...CTCCCATCCTGGAACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGCCCACTCTGGGGATGTaGTTTTTCCTGGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KPATLANPLGQRCLPHPKPTLGM*FFLVFP
Trigger: GGGAAAGACCAGGAAAAACCACATCCCCAGAGTGGG...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp CCACTCTGGGGATGTGGTTTTTCCTGGTCTTTCCCAGGACTGCTCCGGAATTGGTCACCCTCTTCCCACTaGTGTACGGGATGGACAGCA +
Preference number: 4 (lower is better)
Translates to: PLWGCGFSWSFPGLLRNWSPSSH*CTGWTA
Trigger: TGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGA...CCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCCCCAGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATTCAGAAAGGGCAGGCTaGAACTCTGGGCACAAACTG +
Preference number: 4 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDSERAG*NSGHKL
Trigger: CAGTTTGTGCCCAGAGTTCCAGCCTGCCCTTTCTGA...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR CAA 72 bp AGGGACTCGCTGAGTGCTCCTATCGTGGCCGAGGGGTaGAAGATGATCTCAGCCCCGTTGATGCTGTACATA +
Preference number: 4 (lower is better)
Translates to: RDSLSAPIVAEG*KMISAPLMLYI
Trigger: TATGTACAGCATCAACGGGGCTGAGATCATCTTCAACCCCTCGGCCACGATAGGAGCACTCAGCGAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACAATGGTTTCCATCTCTTaGCCTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTMVSIS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAAGAGATGGAAACCAT...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGCCTCCCGGGTTCAAGTaGTTCTCCTCCCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWPPGFK*FSSLSL
Trigger: CAGGCTGAGGGAGGAGAATCACTTGAACCCGGGAGG...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGTACTCTAAGCCTGGGTaGCAGAGTAAGTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYEYSKPG*QSKSLS
Trigger: AGACAAGGACTTACTCTGTCACCCAGGCTTAGAGTA...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGCGGGGTCGTCTCAGCTaGTCCTCCGCTGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWRGRLS*SSAASK
Trigger: CTTTGAAGCAGCGGAGGAGCAGCTGAGACGACCCCG...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GCTTTCTTTCCATCTCCCGAGGTAAACTCGTTCGGGAAGTGCTCGGTGCCCACTCACAAAACATCCCCATaGTCGCTGTCTCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AFFPSPEVNSFGKCSVPTHKTSP*SLSRSR
Trigger: CCTGGAACGAGACAGCGAGCATGGGGATGTTTTGTG...AGTGGGCACCGAGCACTTCCCGAACGAGTTTACCTCGGGAGATGGAAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGCGATCCTTCCGAACTaGGTCTGGAACACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWAILPN*VWNTGW
Trigger: CCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCGC...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCAGTGAGAGCCCCATTTaGTGTTACCGCGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIISESPI*CYRESR
Trigger: TCTGGATTCGCGGTAACAGCAAATGGGGCTCTCACT...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCGTTCAAAGTCTTCTCTaGAGGCAGCTTCGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEAVQSLL*RQLRKL
Trigger: AAGCTTTCGAAGCTGCCTCCAGAGAAGACTTTGAAC...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp AGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGAGGATGTGGTTTTTCCTaGTCTTTCCCAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: RGVFLTPRQALKPATLSRGCGFS*SFPGLL
Trigger: GAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCC...TCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GAATTGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCAATGGCTGCGTTTCTaGCCTCGATGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: ELEITTAVFHKTSPCSLSQWLRF*PRWATG
Trigger: CCCTGTGGCCCATCGAGGCCAGAAACGCAGCCATTG...AGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGGGGTTTCACCATGTTaGCCAGGATGGTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: KPATLANPLGQRCLPHPKGVSPC*PGWFPS
Trigger: AGATGGAAACCATCCTGGCCAACATGGTGAAACCCC...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp ACAATAACTGTGTGGCCAGCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACTTACCTCTGGCCACTTaGCTTGAGCCATCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: TITVWPAEGAPDSDHSSHLPLAT*LEPSRC
Trigger: ACACCGAGATGGCTCAAGCCAAGTGGCCAGAGGTAA...GTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGCTGGCCACACAGTTATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382760.2
3UTR CAA 72 bp ATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTaGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: IGENLDMLSLPH*LIHWGRGVFLT
Trigger: GGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCAGTAAGTTGACTCGTTaGAATCACCCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SGSALTLFPLVYGMDSIISKLTR*NHPLWG
Trigger: TCCCCAGAGTGGGTGATTTCAACGAGTCAACTTACT...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp AGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGAACCTGCCCGTCATCTTaGAGTTCCAGACATCATTCA +
Preference number: 4 (lower is better)
Translates to: RGVFLTPRQALKPATLSRTCPSS*SSRHHS
Trigger: TGAATGATGTCTGGAACTTCAAGATGACGGGCAGGT...TCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCAGCTTCTGTATTAGGTTaGTTACACCCTCTAGAAACC +
Preference number: 4 (lower is better)
Translates to: EGQTVRNSRQALGCCPQAASVLG*LHPLET
Trigger: GGTTTCTAGAGGGTGTAATCAACCTAATACAGAAGC...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTGCCACGGTCCGCCAGTaGTTGTGTCCGCGCACGAAC +
Preference number: 4 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESATVRQ*LCPRTN
Trigger: GTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGC...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGTTCGGCGAGCTCCCGTaGGTACATCTCATACCTGCC +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWFGELP*VHLIPA
Trigger: GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAA...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp AGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCGATACTCTGGTTAACTaGTATTTGAGACTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRADCQELSPSTGLLSSGDTLVN*YLRLGR
Trigger: CCTGCCAAGTCTCAAATAGCAGTTAACCAGAGTATC...GCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGTGGACGGAGAATCCATaGTTCCTGGAAACAGATGAT +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYEWTENP*FLETDD
Trigger: ATCATCTGTTTCCAGGAAGCATGGATTCTCCGTCCA...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTCCTCTGCCGCGTGTGTaGAAATATGGGCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGPLPRV*KYGHFP
Trigger: AGGAAAGTGCCCATATTTGCACACACGCGGCAGAGG...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCGGGCCCTGGCGCGGGTaGCTCCAGGTTCCACCCCTC +
Preference number: 4 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTGPWRG*LQVPPL
Trigger: GAGGGGTGGAACCTGGAGGCACCCGCGCCAGGGCCC...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTGTTCAAAGTCTTCTCTaGAGGCAGCTTCGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: AEGAPDSDHSSHKALGQIVQSLL*RQLRKL
Trigger: AAGCTTTCGAAGCTGCCTCCAGAGAAGACTTTGAAC...AATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTAGCAGTGATTGGCAATaGCTGCGTTTCTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGSSDWQ*LRFWPR
Trigger: TCGAGGCCAGAAACGCAGCCATTGCCAATCACTGCT...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTCACTTGCTAATCCACTaGGGCAGAGGTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGHLLIH*GRGVFL
Trigger: GAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTG...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGGTCGGGCCGGGACCCTaGAGAGGTCGTGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLVGPGP*RGREGV
Trigger: GACTCCCTCACGACCTCTCCAGGGTCCCGGCCCGAC...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCAGGGCTTCGCGGGTaGGACCGCCCCTGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLPGLRG*DRPWPL
Trigger: TAAAGGCCAGGGGCGGTCCCACCCGCGAAGCCCTGG...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGCGCAGGTGAAGCAGTaGTTGGCAATGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWAQVKQ*LAMAAF
Trigger: AAACGCAGCCATTGCCAATCACTGCTTCACCTGCGC...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp GACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCCGTCATCAGATTAGTGTCTGATTaGATTACTGGTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: DLTASASSRAYISYLPVIRLVSD*ITGDCG
Trigger: GCCACAGTCACCAGTAATTCAATCAGACACTAATCT...GATGACGGGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTAACCTCAAATCCACCTaGACAAGCAGTACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGNLKST*TSSTWA
Trigger: TGCCCAGGTACTGCTTGTGCAGGTGGATTTGAGGTT...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGATGGACAGCATCATCTaGCTAACCTCAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: KPATLANPLGQRCLPHPKMDSII*LTSNPP
Trigger: AGGTGGATTTGAGGTTAGGCAGATGATGCTGTCCAT...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATGGTAAAGTGAAAACCTaGAGCACAGAGAGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDGKVKT*STESSR
Trigger: CCTTGAACTCTCTGTGCTGCAGGTTTTCACTTTACC...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp GATCTCAGCCCCGTTGATGCTGTACATAAGCCAGTTGAGGGGGTGGTGCCGCCCATAGTCCATGCTTCCTaGAAACAGATGATGTTGACT +
Preference number: 4 (lower is better)
Translates to: DLSPVDAVHKPVEGVVPPIVHAS*KQMMLT
Trigger: AGTCAACATCATCTGTTTCCAGGAAGCATGGACTAT...GGGCGGCACCACCCCCTCAACTGGCTTATGTACAGCATCAACGGGGCTGAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGCTTCTGACAGAATCTaGTGGTGGGCCCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWASDRI*WWAHPL
Trigger: CAGAGGATGGGCCCACCACCAGATTCTGTCAGAAGC...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGCTACTCTTTCACGATaGTGGGGCTGTAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGATLSR*WGCSWT
Trigger: AGTCCAACTACAGCCCCACCATCGTGAAAGAGTAGC...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp TGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTCACTTGCTAATCCACTaGGGCAGAGGTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: WRSPRLYSTKHPHARCLVHLLIH*GRGVFL
Trigger: GAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTG...AACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGTCACCCTCTTCCCACTaGTGTACGGGATGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWSPSSH*CTGWTA
Trigger: TGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGA...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp AGTCTGCTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTAAGGTAAAGAAGTCCTaGTCAGGAGGGCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLLVGERPLKFLPLATWLKVKKS*SGGHRR
Trigger: TCTCCTGTGCCCTCCTGACCAGGACTTCTTTACCTT...AAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CCA 90 bp GGTGTAGATCTGGAAACTGTGTCCAGCGTGACCGAGCCCTGCCGCTGGTATGAGTTGGGGTTGAATGCGTaGCAAGTAGAAAACAAAGCA +
Preference number: 4 (lower is better)
Translates to: GVDLETVSSVTEPCRWYELGLNA*QVENKA
Trigger: TGCTTTGTTTTCTACTTGCCACGCATTCAACCCCAA...CTCATACCAGCGGCAGGGCTCGGTCACGCTGGACACAGTTTCCAGATCTACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CCA 90 bp TGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTGCGTGTGTGCAAATATaGGCACTTTCCTGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: WRSPRLYSTKHPHARCLVACVQI*ALSCGR
Trigger: CCTACCGCAGGAAAGTGCCCATATTTGCACACACGC...AACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp ATAGTCCATGCTTCCTGGAAACAGATGATGTTGACTCCACACATTGCAGCCACCTTCTTCGCCAGCTTCTaGCAGAATCTGGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: IVHASWKQMMLTPHIAATFFASF*QNLVVG
Trigger: GCCCACCACCAGATTCTGTCAGAAGCTGGCGAAGAA...GGTGGCTGCAATGTGTGGAGTCAACATCATCTGTTTCCAGGAAGCATGGACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCAAAGGGCATAGTCCATaGTTCCTGGAAACAGATGAT +
Preference number: 4 (lower is better)
Translates to: VVGLDSFGELPCVHLIPAKGHSP*FLETDD
Trigger: ATCATCTGTTTCCAGGAAGCATGGACTATGCCCTTT...GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp AGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCACTTACTTAGTCAATTaGGAATGGACTTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: RRADCQELSPSTGLLSSGTYLVN*EWTSVT
Trigger: TGTGACAGAAGTCCATTCCCAATTGACTAAGTAAGT...GCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCATAATCAAAGAGTTGTaGTCCATTTATTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPIIKEL*SIYSCL
Trigger: CAGGCATGAATAAATGGACCACAACTCTTTGATTAT...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp GACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCCGTCATCCTGACCCAGATTATCTaGGATAATCTCACTTACTTA +
Preference number: 4 (lower is better)
Translates to: DLTASASSRAYISYLPVILTQII*DNLTYL
Trigger: TAAGTAAGTGAGATTATCTCAGATAATCTGGGTCAG...GATGACGGGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp TGGGGCAGATTCCTTGGAGGAGATGAAACTGATAGACTGTTTGATGCGTCTAAATACAAAAGCCAGAGGTaGGCTGCCAGGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: WGRFLGGDETDRLFDASKYKSQR*AARGLD
Trigger: GTCCAAGCCCCTGGCAGCTCACCTCTGGCTTTTGTA...TTTAGACGCATCAAACAGTCTATCAGTTTCATCTCCTCCAAGGAATCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAGAACTGCCTGCCCTTTaGCCGCAGTGGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRELPAL*PQWEEV
Trigger: CACCTCCTCCCACTGCGGGCAAAGGGCAGGCAGTTC...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAACGCGCTTCACTTCCTaGAAGTCGGGGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRTRFTS*KSGSGR
Trigger: CCTGCCGCTCCCCGACTTGCAGGAAGTGAAGCGCGT...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACAAAAGGGCATAGTCCATaGTTCCTGGAAACAGATGAT +
Preference number: 4 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTKGHSP*FLETDD
Trigger: ATCATCTGTTTCCAGGAAGCATGGACTATGCCCTTT...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGGCGATCCTTCCGAACTaGGTCTGGAACACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLAILPN*VWNTGW
Trigger: CCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCGC...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp GAATTGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCAGACATCATTCACCTaGTGGCAGAGGTTTAGGTCG +
Preference number: 4 (lower is better)
Translates to: ELEITTAVFHKTSPCSLSQTSFT*WQRFRS
Trigger: CGACCTAAACCTCTGCCAGCAGGTGAATGATGTCTG...AGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR GCA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCGCCCCTTTTCAGCCCTaGCCTCTGCCGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTAPFQP*PLPRVC
Trigger: GCACACACGCGGCAGAGGGCAGGGCTGAAAAGGGGC...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGAGCCTGCTGAGTACCTaGGACTACAGGCGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLSLLST*DYRRAP
Trigger: TGGCGCACGCCTGTAGTCCCAGGTACTCAGCAGGCT...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR CAA 72 bp GCATGTTCCAGGGATGAGTTAAACCTTGAAATGACCTaGGCTGTACAGGGCCTGCATACTCTAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: ACSRDELNLEMT*AVQGLHTLRWA
Trigger: GGCCCATCTTAGAGTATGCAGGCCCTGTACAGCCAAGGTCATTTCAAGGTTTAACTCATCCCTGGAACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR CAA 72 bp AAGGGCATAGTCCATGCTTCCTGGAAACAGATGATGTaGACTCCACACATTGCAGCCACCTCTACGATAGCC +
Preference number: 4 (lower is better)
Translates to: KGIVHASWKQMM*TPHIAATSTIA
Trigger: GGCTATCGTAGAGGTGGCTGCAATGTGTGGAGTCAACATCATCTGTTTCCAGGAAGCATGGACTATGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR TCA 90 bp ATCAAGGCTGCAGTGAGCTGTGATTGTACTCTAAGCCTGGGTGACAGAGTAAGTGCCTTTATGCGTCTATaGAGGGCAGAGACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IKAAVSCDCTLSLGDRVSAFMRL*RAETCS
Trigger: AGAACAGGTCTCTGCCCTTCATAGACGCATAAAGGC...ACTTACTCTGTCACCCAGGCTTAGAGTACAATCACAGCTCACTGCAGCCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAGGCTGTAGTTGGACTTaGCAGCTTCGGCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRGCSWT*QLRRAP
Trigger: GGGAGCTCGCCGAAGCTGTCAAGTCCAACTACAGCC...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCCAGGGACTCGCTGAGTaGTCCTATCGTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTQGLAE*SYRGRG
Trigger: CCCTCGGCCACGATAGGAGCACTCAGCGAGTCCCTG...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp GGGCCAGGAGGAGGCAAGAAAGGGCTAACACTGACATCTTCCATAGGGGGAAGTAAGTTTGGGGTTGAATaGGTGGCAAGTAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: GPGGGKKGLTLTSSIGGSKFGVE*VASRKQ
Trigger: TTGTTTTCTACTTGCCACGCATTCAACCCCAAACTT...ACTTCCCCCTATGGAAGATGTCAGTGTTAGCCCTTTCTTGCCTCCTCCTGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAAGGGGGATTCTGTTCTaGACCAGCCCCACGTGCACA +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRRGILF*TSPTCT
Trigger: TGTGCACGTGGGGCTGGTTCAGAACAGAATCCCCCT...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTGGGCTAAATAGGCGCTaGACTGATAACTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESGLNRR*TDNCQG
Trigger: CCCTTGGCAGTTATCAGTGCAGCGCCTATTTAGCCC...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAGGCAGGTTGGGCTCTTaGCGTGTTGTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRGRLGS*RVVQGQ
Trigger: CTGTCCCTGAACAACACGGCAAGAGCCCAACCTGCC...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGTCTGACAGAATCTGGTaGTGGGCCCATCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLSDRIW*WAHPLL
Trigger: CAGCAGAGGATGGGCCCACCACCAGATTCTGTCAGA...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR TCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAGGGCCCATCCTCTGCTaGCTCAGCAAATTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRGPILC*LSKFCP
Trigger: TGGACAGAATTTGCTGAGTCAGCAGAGGATGGGCCC...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGCATTCAAATGTTTACTaGGCATCTGCATGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWHSNVY*ASACSR
Trigger: CCTGGAACATGCAGATGCTCAGTAAACATTTGAATG...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTGTTGACTCCACACATTaGAGCCACCTCTACGATAGC +
Preference number: 4 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESVDSTH*SHLYDS
Trigger: GCTATCGTAGAGGTGGCTGCAATGTGTGGAGTCAAC...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGGGTCTTTCCCAGGACTaGTCCGGAATTGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLGLSQD*SGIGDH
Trigger: GTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACC...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR GCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGGTGATCTCAGCTCACTaGAGCCTTTGCCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLVISAH*SLCLPD
Trigger: ATCTGGGAGGCAAAGGCTGCAGTGAGCTGAGATCAC...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGATCTGACAGAATCTGGTaGTGGGCCCATCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRSDRIW*WAHPLL
Trigger: CAGCAGAGGATGGGCCCACCACCAGATTCTGTCAGA...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTACTTACTTAGTCAATTaGGAATGGACTTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGTYLVN*EWTSVT
Trigger: TGTGACAGAAGTCCATTCCCAATTGACTAAGTAAGT...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCCCACCCCACCACACCTaGCCCAGTCCCATTTTACAG +
Preference number: 4 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTPPHHT*PSPILQ
Trigger: CTGTAAAATGGGACTGGGCCAGGTGTGGTGGGGTGG...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp GAACAAGGACACATGTATGTCGAAGGGCCAGGAGGAGGCAAGAAAGGGCTAACAAGAATCCATGCTTCCTaGAAACAGATGATGTTGACT +
Preference number: 4 (lower is better)
Translates to: EQGHMYVEGPGGGKKGLTRIHAS*KQMMLT
Trigger: AGTCAACATCATCTGTTTCCAGGAAGCATGGATTCT...TGTTAGCCCTTTCTTGCCTCCTCCTGGCCCTTCGACATACATGTGTCCTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTAGTAAGTTGACTCGTTaGAATCACCCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESSKLTR*NHPLWG
Trigger: TCCCCAGAGTGGGTGATTTCAACGAGTCAACTTACT...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGACACAAAACATCCCCATaGTCGCTGTCTCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRHKTSP*SLSRSR
Trigger: CCTGGAACGAGACAGCGAGCATGGGGATGTTTTGTG...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCCGCCAAGCACTGGGCTaGTGTCCTCAGGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTRQALG*CPQAEF
Trigger: AAATTCTGCCTGAGGACAGCAGCCCAGTGCTTGGCG...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAGGACTGCTCCGGAATTaGAGATCACCACGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRGLLRN*RSPRLY
Trigger: ATACAGCCGTGGTGATCTCCAATTCCGGAGCAGTCC...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGACCCACTCTGGGGATGTaGTTTTTCCTGGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRPTLGM*FFLVFP
Trigger: GGGAAAGACCAGGAAAAACCACATCCCCAGAGTGGG...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGGTTTCTCATCCTTGGTaGCTGTCCAGGAGTACCCTA +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLVSHPW*LSRSTL
Trigger: TAGGGTACTCCTGGACAGCCACCAAGGATGAGAAAC...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAAGGGTTTCTCATCCTTaGTGGCTGTCCAGGAGTACC +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRRVSHP*WLSRST
Trigger: GGTACTCCTGGACAGCCACCAAGGATGAGAAACCCT...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTCTACCCTCTTTACCCTaGCTCTATGGAAATAGAGTC +
Preference number: 4 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESLPSLP*LYGNRV
Trigger: GACTCTATTTCCATAGAGTCAGGGTAAAGAGGGTAG...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGACAGACATCATTCACCTaGTGGCAGAGGTTTAGGTCG +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRQTSFT*WQRFRS
Trigger: CGACCTAAACCTCTGCCAGCAGGTGAATGATGTCTG...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAAACCTCAAATCCACCTaGACAAGCAGTACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRNLKST*TSSTWA
Trigger: TGCCCAGGTACTGCTTGTGCAGGTGGATTTGAGGTT...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp TGGGGCAGATTCCTTGGAGGAGATGAAACTGATAGACTGTTTGATGCGTCTAAATTAAGTTCTTACCTCTaGCCACTTGGCTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: WGRFLGGDETDRLFDASKLSSYL*PLGLSH
Trigger: ATGGCTCAAGCCAAGTGGCCAGAGGTAAGAACTTAA...TTTAGACGCATCAAACAGTCTATCAGTTTCATCTCCTCCAAGGAATCTGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR GCA 90 bp TGGGGCAGATTCCTTGGAGGAGATGAAACTGATAGACTGTTTGATGCGTCTAAATCAAAGGCATATCCCTaGAGTTCAAAGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WGRFLGGDETDRLFDASKSKAYP*SSKSSL
Trigger: CAGAGAAGACTTTGAACTGCAGGGATATGCCTTTGA...TTTAGACGCATCAAACAGTCTATCAGTTTCATCTCCTCCAAGGAATCTGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCTGGACAATGTTATTaGGGAGAACCTGGACATGTT +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLPGQCY*GEPGHV
Trigger: AACATGTCCAGGTTCTCCCCAATAACATTGTCCAGG...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGACCATGTTGGCCAGGATaGTTTCCATCTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRPCWPG*FPSLDL
Trigger: AAGGTCAAGAGATGGAAACCATCCTGGCCAACATGG...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGTCAAAGGCATATCCCTaGAGTTCAAAGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLSKAYP*SSKSSL
Trigger: CAGAGAAGACTTTGAACTGCAGGGATATGCCTTTGA...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR GCA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCACTATTGCTGCACCATaGCATGGACTACCAACTACC +
Preference number: 4 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTTIAAP*HGLPTT
Trigger: GGTAGTTGGTAGTCCATGGCATGGTGCAGCAATAGT...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTATAGTCCATGCTTCCTaGAAACAGATGATGTTGACT +
Preference number: 4 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESIVHAS*KQMMLT
Trigger: AGTCAACATCATCTGTTTCCAGGAAGCATGGACTAT...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp GTGAGTAATCTGATGTGTAAAATGGAGCTCAACCACATTAGCAGAACTAGCAGAAGATTAGTGTCTGATTaGATTACTGGTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: VSNLMCKMELNHISRTSRRLVSD*ITGDCG
Trigger: GCCACAGTCACCAGTAATTCAATCAGACACTAATCT...TCTGCTAGTTCTGCTAATGTGGTTGAGCTCCATTTTACACATCAGATTACTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR TCA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTCTGACCCAGATTATCTaGGATAATCTCACTTACTTA +
Preference number: 4 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESLTQII*DNLTYL
Trigger: TAAGTAAGTGAGATTATCTCAGATAATCTGGGTCAG...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CCA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCACCCTAGCCCTGACATaGAGGTTTCCATATAGTTCA +
Preference number: 4 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTTLALT*RFPYSS
Trigger: TGAACTATATGGAAACCTCCATGTCAGGGCTAGGGT...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR CAA 72 bp GCAGATTCCTTGGAGGAGATGAAACTGATAGACTGTTaGATGCGTCTAAAACACATTAAGGGAGATTTAGGA +
Preference number: 4 (lower is better)
Translates to: ADSLEEMKLIDC*MRLKHIKGDLG
Trigger: TCCTAAATCTCCCTTAATGTGTTTTAGACGCATCAAACAGTCTATCAGTTTCATCTCCTCCAAGGAATCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR TCA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCTCTGTTTCCAGGCAATaGGAGTTGCAGATAATCAAA +
Preference number: 4 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTSVSRQ*ELQIIK
Trigger: TTTGATTATCTGCAACTCTCATTGCCTGGAAACAGA...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
3UTR CAA 72 bp TACCCTCTTTACCCTGACTCTATGGAAATAGAGTCATaGATGCCTTTAAGTTCAATCAAACTAGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: YPLYPDSMEIES*MPLSSIKLGKN
Trigger: ATTCTTCCCTAGTTTGATTGAACTTAAAGGCATCAATGACTCTATTTCCATAGAGTCAGGGTAAAGAGGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS CCA 90 bp GGGTCTGAGGTAAACGGCCCGGCCGCTGCGGGCCCTTGCGGGGGCTaGTTCCAGCAGCAACCGCCGGGCAGGGCCCCTCCCGACCGCGAC +
Preference number: 5 (lower is better)
Translates to: GSEVNGPAAAGPCGG*FQQQPPGRAPPDRD
Trigger: GTCGCGGTCGGGAGGGGCCCTGCCCGGCGGTTGCTGCTGGAACCAGCCCCCGCAAGGGCCCGCAGCGGCCGGGCCGTTTACCTCAGACCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 90 bp GCCGCTACCTGGGTCGCGCGTTCCCACCCCCGGCTTTGGGGCCGCTaGAGCCGAAGGTCAGTTGCTCGCCTGCGGTTCCGTGCGCCTCGG +
Preference number: 5 (lower is better)
Translates to: AATWVARSHPRLWGR*SRRSVARLRFRAPR
Trigger: CCGAGGCGCACGGAACCGCAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGTGGGAACGCGCGACCCAGGTAGCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 90 bp TGCCGCCTCCGCAGCACACGGCCAATCAGCCTCCAGGGCCTCACGTaGGGAGGGGGCGAAAGGATCCGGCGCTTGCCCTTCGCCCCTTGC +
Preference number: 5 (lower is better)
Translates to: CRLRSTRPISLQGLT*GGGERIRRLPFAPC
Trigger: GCAAGGGGCGAAGGGCAAGCGCCGGATCCTTTCGCCCCCTCCCCACGTGAGGCCCTGGAGGCTGATTGGCCGTGTGCTGCGGAGGCGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS TCA 90 bp GCTTGCCCTTCGCCCCTTGCCCTTCGCCTCTCGGTTAGCAAGCGATaGGGCACGCCCCTCCACAGGCGGGACTGCGCGGAGTCGTCGCGC +
Preference number: 5 (lower is better)
Translates to: ACPSPLALRLSVSKR*GTPLHRRDCAESSR
Trigger: GCGCGACGACTCCGCGCAGTCCCGCCTGTGGAGGGGCGTGCCTCATCGCTTGCTAACCGAGAGGCGAAGGGCAAGGGGCGAAGGGCAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 90 bp GGAGTCCATGCCGCTACCTGGGTCGCGCGTTCCCACCCCCGGCTTTaGGGCCGCTGGAGCCGAAGGTCAGTTGCTCGCCTGCGGTTCCGT +
Preference number: 5 (lower is better)
Translates to: GVHAATWVARSHPRL*GRWSRRSVARLRFR
Trigger: ACGGAACCGCAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGTGGGAACGCGCGACCCAGGTAGCGGCATGGACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 90 bp TCCAGCGACTTCCACTCAGCGCCCGCCATGGCCACGGTCCGCCAGTaGTTGTGTCCGCGCACGAACTGCCTGCCCTTTGCCCGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: SSDFHSAPAMATVRQ*LCPRTNCLPFARSG
Trigger: CCCACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGCCATGGCGGGCGCTGAGTGGAAGTCGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326010.10
ENST00000382760.2
ENST00000415388.5
CDS CCA 90 bp GCGCAGCCAATCCGCCTTCCAGGGCTTCGCGGGTGGGACCGCCCCTaGCCTTTAGCGCTCCTTCGGCACGTGCCAGGACACGTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: AQPIRLPGLRGWDRP*PLALLRHVPGHVPL
Trigger: AAGAGGAACGTGTCCTGGCACGTGCCGAAGGAGCGCTAAAGGCCAGGGGCGGTCCCACCCGCGAAGCCCTGGAAGGCGGATTGGCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 90 bp CTGGCCTTTAGCGCTCCTTCGGCACGTGCCAGGACACGTTCCTCTTaGCGCCTCCGCAGCACACGGCCAATCAGCCTCCAGGGCCTCACG +
Preference number: 5 (lower is better)
Translates to: LAFSAPSARARTRSS*RLRSTRPISLQGLT
Trigger: CGTGAGGCCCTGGAGGCTGATTGGCCGTGTGCTGCGGAGGCGGCAAGAGGAACGTGTCCTGGCACGTGCCGAAGGAGCGCTAAAGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 90 bp CCAGTGCTTGTGTCCGCGCACGAACTGCCTGCCCTTTGCCCGCAGTaGGAGGAGGTGCCCAGGCCCGGTCAGGCGCCCTTGCCTTTATCT +
Preference number: 5 (lower is better)
Translates to: PVLVSAHELPALCPQ*EEVPRPGQAPLPLS
Trigger: AGATAAAGGCAAGGGCGCCTGACCGGGCCTGGGCACCTCCTCCCACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACACAAGCACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382760.2
ENST00000415388.5
CDS-3UTR CAA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCACCCCTCACCTGCCCCTaGGTGTCGGGCCGGGACCCT +
Preference number: 5 (lower is better)
Translates to: EGQTVRNSRQALGCCPQAPLTCP*VSGRDP
Trigger: AGGGTCCCGGCCCGACACCAAGGGGCAGGTGAGGGG...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 90 bp TGTCCGCGCACGAACTGCCTGCCCTTTGCCCGCAGTGGGAGGAGGTaGCCAGGCCCGGTCAGGCGCCCTTGCCTTTATCTCTTACTCTCG +
Preference number: 5 (lower is better)
Translates to: CPRTNCLPFARSGRR*PGPVRRPCLYLLLS
Trigger: CGAGAGTAAGAGATAAAGGCAAGGGCGCCTGACCGGGCCTGGGCACCTCCTCCCACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382760.2
ENST00000415388.5
CDS CCA 90 bp GCTTCTCCAAGCATTCCTCCAGCGACTTCCACTCAGCGCCCGCCATaGCCACGGTCCGCCAGTGCTTGTGTCCGCGCACGAACTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ASPSIPPATSTQRPP*PRSASACVRARTAC
Trigger: GCAGGCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGCCATGGCGGGCGCTGAGTGGAAGTCGCTGGAGGAATGCTTGGAGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326010.10
ENST00000382760.2
ENST00000415388.5
CDS-3UTR CAA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCGGAGCCGAAGGTCAGTaGCTCGCCTGCGGTTCCGTG +
Preference number: 5 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEAGAEGQ*LACGSV
Trigger: CACGGAACCGCAGGCGAGCAACTGACCTTCGGCTCC...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCAGAAAGGATCCGGCGCTaGCCCTTCGCCCCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: EGQTVRNSRQALGCCPQAERIRR*PFAPCP
Trigger: AGGGCAAGGGGCGAAGGGCAAGCGCCGGATCCTTTC...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp AGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTGTACATAAGCCAGTaGAGGGGGTGGTGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: RPSDPPQPCCRLRVSGSALYISQ*RGWCRP
Trigger: CGGGCGGCACCACCCCCTCAACTGGCTTATGTACAG...GGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS TCA 90 bp GTCCTGGTGAGGGTGCCCACTCGATTGATGGCGCAGGTGAAGCAGTaGTTGGCAATGGCTGCGTTTCTGGCCTCGATGGGCCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: VLVRVPTRLMAQVKQ*LAMAAFLASMGHRD
Trigger: GTCCCTGTGGCCCATCGAGGCCAGAAACGCAGCCATTGCCAATCACTGCTTCACCTGCGCCATCAATCGAGTGGGCACCCTCACCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498140.1
CDS GCA 90 bp ATCCCGGCTACGGGACAGCCCAGGAGTCCGGCTGCTGTCAGGGGCTaGCACATAGCTCGAGCCATAAAAGTAGCCAAAGTCCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: IPATGQPRSPAAVRG*HIARAIKVAKVLVR
Trigger: CCTCACCAGGACTTTGGCTACTTTTATGGCTCGAGCTATGTGGCAGCCCCTGACAGCAGCCGGACTCCTGGGCTGTCCCGTAGCCGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498140.1
CDS-3UTR CAA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCCCCGGTCAGGCGCCCTaGCCTTTATCTCTTACTCTC +
Preference number: 5 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPPGQAP*PLSLTL
Trigger: GAGAGTAAGAGATAAAGGCAAGGGCGCCTGACCGGG...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 90 bp GGGCCACAGGGACTCGCTGTAAGAGAGGACCAAGAGGAACCAGGTTaGCGACTTTCCAGGCAGACTCAGTGGATGCTCAGCCCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: GPQGLAVREDQEEPG*RLSRQTQWMLSPEP
Trigger: AGGCTCAGGGCTGAGCATCCACTGAGTCTGCCTGGAAAGTCGGCAACCTGGTTCCTCTTGGTCCTCTCTTACAGCGAGTCCCTGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486043.1
CDS TCA 90 bp GGAGGGCACAGGAGACCAGCTGGAGGGAATTACAAAAGCCAGAGGTaGGCTGCCAGGGGCTTGGACCAGGTGGTGGTAGAGAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: GGHRRPAGGNYKSQR*AARGLDQVVVERWR
Trigger: TCTCCATCTCTCTACCACCACCTGGTCCAAGCCCCTGGCAGCTCACCTCTGGCTTTTGTAATTCCCTCCAGCTGGTCTCCTGTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS GCA 90 bp CAGCCCCACGTGCACAATGCGGGGTCGTCTCAGCTGCTCCTCCGCTaGTTCAAAGGCATATCCCTGCAGTTCAAAGTCTTCTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: QPHVHNAGSSQLLLR*FKGISLQFKVFSGG
Trigger: GCCTCCAGAGAAGACTTTGAACTGCAGGGATATGCCTTTGAAGCAGCGGAGGAGCAGCTGAGACGACCCCGCATTGTGCACGTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000382760.2
CDS GCA 90 bp GCACAGGAGACCAGCTGGAGGGAATTACAAAAGCCAGAGGTGAGCTaGCAGGGGCTTGGACCAGGTGGTGGTAGAGAGATGGAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: AQETSWRELQKPEVS*QGLGPGGGREMERS
Trigger: GCTCCTCTCCATCTCTCTACCACCACCTGGTCCAAGCCCCTGGCAGCTCACCTCTGGCTTTTGTAATTCCCTCCAGCTGGTCTCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS GCA 90 bp CTGCACCCTAGGGCCCCTTTTCAGCCCTGCCCTCTGCCGCGTGTGTaGAAATATGGGCACTTTCCTGCGGTAGGGTGCGCTTTAAACTGT +
Preference number: 5 (lower is better)
Translates to: LHPRAPFQPCPLPRV*KYGHFPAVGCALNC
Trigger: ACAGTTTAAAGCGCACCCTACCGCAGGAAAGTGCCCATATTTGCACACACGCGGCAGAGGGCAGGGCTGAAAAGGGGCCCTAGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCAAGGACTGCTCCGGAATaGGAGATCACCACGGCTGTA +
Preference number: 5 (lower is better)
Translates to: EGQTVRNSRQALGCCPQARTAPE*EITTAV
Trigger: TACAGCCGTGGTGATCTCCAATTCCGGAGCAGTCCT...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp CCACTCTGGGGATGTGGTTTTTCCTGGTCTTTCCCAGGACTGCTCCGGAATTGGCTGTACATAAGCCAGTaGAGGGGGTGGTGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: PLWGCGFSWSFPGLLRNWLYISQ*RGWCRP
Trigger: CGGGCGGCACCACCCCCTCAACTGGCTTATGTACAG...CCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCCCCAGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCATCGTGGCCGAGGGGTaGAAGATGATCTCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIIVAEG*KMISAP
Trigger: CGGGGCTGAGATCATCTTCAACCCCTCGGCCACGAT...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp TCCAAAGACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATTCGGTGCCCACTCGATaGATGGCGCAGGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SKDHPTHHSLAVGSGSLDSVPTR*MAQVKQ
Trigger: CTGCTTCACCTGCGCCATCAATCGAGTGGGCACCGA...ATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTCTTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCAGCTCACTGCAGCCTTaGCCTCCCAGATTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPSSLQP*PPRFKQ
Trigger: TTGCTTGAATCTGGGAGGCAAAGGCTGCAGTGAGCT...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp GAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCATGGGCTCTTGCCGTGTaGTTCAGGGACAGGGCTAAA +
Preference number: 5 (lower is better)
Translates to: EGQTVRNSRQALGCCPQAWALAV*FRDRAK
Trigger: TTTAGCCCTGTCCCTGAACAACACGGCAAGAGCCCA...TGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp GCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTCCCGGTCAGGCGCCCTaGCCTTTATCTCTTACTCTC +
Preference number: 5 (lower is better)
Translates to: AEGAPDSDHSSHKALGQIPGQAP*PLSLTL
Trigger: GAGAGTAAGAGATAAAGGCAAGGGCGCCTGACCGGG...AATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CAA 90 bp AAAGGGCATAGTCCATGCTTCCTGGAAACAGATGATGTTGACTCCACACATTGCGGCCGCTGCGGGCCCTaGCGGGGGCTGGTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KGHSPCFLETDDVDSTHCGRCGP*RGLVPA
Trigger: TGCTGGAACCAGCCCCCGCAAGGGCCCGCAGCGGCC...GCAATGTGTGGAGTCAACATCATCTGTTTCCAGGAAGCATGGACTATGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp GAACAAGGACACATGTATGTCGAAGGGCCAGGAGGAGGCAAGAAAGGGCTAACAACGGTCCGCCAGTGCTaGTGTCCGCGCACGAACTGC +
Preference number: 5 (lower is better)
Translates to: EQGHMYVEGPGGGKKGLTTVRQC*CPRTNC
Trigger: GCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGT...TGTTAGCCCTTTCTTGCCTCCTCCTGGCCCTTCGACATACATGTGTCCTTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CAA 90 bp AGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCTTAAGCCTGCCACACTaGCTAATCCACTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: RRADCQELSPSTGLLSSGLSLPH*LIHWGR
Trigger: TCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAA...GCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp AAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGTGGCAGGTTGGGCTCTaGCCGTGTTGTTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: KPATLANPLGQRCLPHPKWQVGL*PCCSGT
Trigger: TGTCCCTGAACAACACGGCAAGAGCCCAACCTGCCA...CTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS GCA 90 bp CGGGGTCGTCTCAGCTGCTCCTCCGCTGCTTCAAAGGCATATCCCTaGAGTTCAAAGTCTTCTCTGGAGGCAGCTTCGAAAGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: RGRLSCSSAASKAYP*SSKSSLEAASKASL
Trigger: CAGGGAAGCTTTCGAAGCTGCCTCCAGAGAAGACTTTGAACTGCAGGGATATGCCTTTGAAGCAGCGGAGGAGCAGCTGAGACGACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000382760.2
CDS-3UTR CAA 90 bp TCTGGATCAGCCCTCACCCTCTTCCCACTGGTGTACGGGATGGACAGCATCATCCAGGGTTTCTCATCCTaGGTGGCTGTCCAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: SGSALTLFPLVYGMDSIIQGFSS*VAVQEY
Trigger: GTACTCCTGGACAGCCACCAAGGATGAGAAACCCTG...GATGATGCTGTCCATCCCGTACACCAGTGGGAAGAGGGTGAGGGCTGATCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp AGTCTGCTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTAGGTGGGAGGATTGCTaGGGCCTGGGATCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SLLVGERPLKFLPLATWLRWEDC*GLGSRL
Trigger: CAGCCTTGATCCCAGGCCCAAGCAATCCTCCCACCT...AAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS GCA 90 bp GGTAGGAGTGAGAGCCCCATTTGCTGTTACCGCGAATCCAGAGGGTaGCATCCCTTCAGGAGCAAAGAAGCGTCCTCTTTGGGGTCCTAT +
Preference number: 5 (lower is better)
Translates to: GRSESPICCYRESRG*HPFRSKEASSLGSY
Trigger: ATAGGACCCCAAAGAGGACGCTTCTTTGCTCCTGAAGGGATGGCACCCTCTGGATTCGCGGTAACAGCAAATGGGGCTCTCACTCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCTGGAAACAGATGATGTaGACTCCACACATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEAWKQMM*TPHIAA
Trigger: GGCTGCAATGTGTGGAGTCAACATCATCTGTTTCCA...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp TGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCGTTTCGGTGCCCACTCGATaGATGGCGCAGGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: WRSPRLYSTKHPHARCLVSVPTR*MAQVKQ
Trigger: CTGCTTCACCTGCGCCATCAATCGAGTGGGCACCGA...AACGAGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGTACCTGCCCGTCATCTaGAAGTTCCAGACATCATTC +
Preference number: 5 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLYLPVI*KFQTSF
Trigger: GAATGATGTCTGGAACTTCAAGATGACGGGCAGGTA...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp GCTAATCCACTGGGGCAGAGGTGTCTTCCTCACCCCAAGGCAGGCACTGAAGCCACCTGGACAATGTTATaGGGGAGAACCTGGACATGT +
Preference number: 5 (lower is better)
Translates to: ANPLGQRCLPHPKAGTEATWTML*GRTWTC
Trigger: ACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGT...GGCTTCAGTGCCTGCCTTGGGGTGAGGAAGACACCTCTGCCCCAGTGGATTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp GAATTGGAGATCACCACGGCTGTATTCCACAAAACATCCCCATGCTCGCTGTCTCTTGCCCTTCGCCCCTaGCCCTTCGCCTCTCGGTTA +
Preference number: 5 (lower is better)
Translates to: ELEITTAVFHKTSPCSLSLALRP*PFASRL
Trigger: TAACCGAGAGGCGAAGGGCAAGGGGCGAAGGGCAAG...AGACAGCGAGCATGGGGATGTTTTGTGGAATACAGCCGTGGTGATCTCCAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp AAAGGGCATAGTCCATGCTTCCTGGAAACAGATGATGTTGACTCCACACATTGCACGGTCCGCCAGTGCTaGTGTCCGCGCACGAACTGC +
Preference number: 5 (lower is better)
Translates to: KGHSPCFLETDDVDSTHCTVRQC*CPRTNC
Trigger: GCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGT...GCAATGTGTGGAGTCAACATCATCTGTTTCCAGGAAGCATGGACTATGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp CCACTCTGGGGATGTGGTTTTTCCTGGTCTTTCCCAGGACTGCTCCGGAATTGGTTAAGCCTGCCACACTaGCTAATCCACTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: PLWGCGFSWSFPGLLRNWLSLPH*LIHWGR
Trigger: TCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAA...CCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCCCCAGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACATTGAGACTTGGCAGGTaGGGCTCTTGCCGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTLRLGR*GSCRVV
Trigger: AACAACACGGCAAGAGCCCAACCTGCCAAGTCTCAA...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp GCAGAGGGGGCACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTGGAACTAGCTCAGTGTaGATGCTGGGGATAATAGCT +
Preference number: 5 (lower is better)
Translates to: AEGAPDSDHSSHKALGQIGTSSV*MLGIIA
Trigger: AGCTATTATCCCCAGCATCAACACTGAGCTAGTTCC...AATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTGCCCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS TCA 90 bp GAGAGATGGAGAGGAGCGAATGGATTCAGAACGATGTGGGAAAACTaGAGGAATCAGACAACAGCTCGGTGCGTAACAGCAGGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: ERWRGANGFRTMWEN*RNQTTARCVTAGRP
Trigger: CGGCCTCCCTGCTGTTACGCACCGAGCTGTTGTCTGATTCCTTCAGTTTTCCCACATCGTTCTGAATCCATTCGCTCCTCTCCATCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CAA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTACGGTCCGCCAGTGCTaGTGTCCGCGCACGAACTGC +
Preference number: 5 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESTVRQC*CPRTNC
Trigger: GCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGT...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp GTAGTTGGACTTGACAGCTTCGGCGAGCTCCCGTGCGTACATCTCATACCTGCCACCTGGACAATGTTATaGGGGAGAACCTGGACATGT +
Preference number: 5 (lower is better)
Translates to: VVGLDSFGELPCVHLIPATWTML*GRTWTC
Trigger: ACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGT...GGCAGGTATGAGATGTACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp GACCATCCGACCCACCACAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCCAGATAATCAAAGAGTaGTGGTCCATTTATTCATGC +
Preference number: 5 (lower is better)
Translates to: DHPTHHSLAVGSGSLDQPQIIKE*WSIYSC
Trigger: GCATGAATAAATGGACCACAACTCTTTGATTATCTG...GGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTGTGGTGGGTCGGATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp TTTAAAACCAACCTGGACAATGTTATTGGGGAGAACCTGGACATGTTAAGCCTGCAGGACACGTTCCTCTaGCCGCCTCCGCAGCACACG +
Preference number: 5 (lower is better)
Translates to: FKTNLDNVIGENLDMLSLQDTFL*PPPQHT
Trigger: CGTGTGCTGCGGAGGCGGCAAGAGGAACGTGTCCTG...CAGGCTTAACATGTCCAGGTTCTCCCCAATAACATTGTCCAGGTTGGTTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS TCA 90 bp AAATATGGGCACTTTCCTGCGGTAGGGTGCGCTTTAAACTGTCACTaGGATGGTAGGAGTGAGAGCCCCATTTGCTGTTACCGCGAATCC +
Preference number: 5 (lower is better)
Translates to: KYGHFPAVGCALNCH*DGRSESPICCYRES
Trigger: GGATTCGCGGTAACAGCAAATGGGGCTCTCACTCCTACCATCTCAGTGACAGTTTAAAGCGCACCCTACCGCAGGAAAGTGCCCATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp ATGTGGTTTTTCCTGGTCTTTCCCAGGACTGCTCCGGAATTGGAGATCACCACGATGATCTCAGCCCCGTaGATGCTGTACATAAGCCAG +
Preference number: 5 (lower is better)
Translates to: MWFFLVFPRTAPELEITTMISAP*MLYISQ
Trigger: CTGGCTTATGTACAGCATCAACGGGGCTGAGATCAT...CGTGGTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp AGAAGGGCAGACTGTCAGGAACTCTCGCCAAGCACTGGGCTGCTGTCCTCAGGCCCAGTAGGGGATATATaGAGATTTATTGCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: RRADCQELSPSTGLLSSGPVGDI*RFIARN
Trigger: ATTCCTTGCAATAAATCTCAATATATCCCCTACTGG...GCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACAGTCTGCCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp CAGCCTTGCTGTAGGCTCAGGGTCTCTGGATCAGCCCTCACCCTCTTCCCACTGCCAGTAGGGGATATATaGAGATTTATTGCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: QPCCRLRVSGSALTLFPLPVGDI*RFIARN
Trigger: ATTCCTTGCAATAAATCTCAATATATCCCCTACTGG...CAGTGGGAAGAGGGTGAGGGCTGATCCAGAGACCCTGAGCCTACAGCAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp TTCCTCACCCCAAGGCAGGCACTGAAGCCGGCTACTCTTTCACGATGGTGGGGCTTTCTAGAACCACTTTaGGCACCAAAATCTGTATCA +
Preference number: 5 (lower is better)
Translates to: FLTPRQALKPATLSRWWGFLEPL*APKSVS
Trigger: TGATACAGATTTTGGTGCCAAAAGTGGTTCTAGAAA...GCCCCACCATCGTGAAAGAGTAGCCGGCTTCAGTGCCTGCCTTGGGGTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS-3UTR CAA 90 bp GGTGACTGTGGCCTAGCTAAGCTGACACATCCAAAGACCATCCGACCCACCACACACAAATGTACCAATTaGTCACCTAAGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GDCGLAKLTHPKTIRPTTHKCTN*SPKLAS
Trigger: AGAAGCCAGCTTAGGTGACAAATTGGTACATTTGTG...TGTGGTGGGTCGGATGGTCTTTGGATGTGTCAGCTTAGCTAGGCCACAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp GTTATTGGGGAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGAACCTTGAAATGACCTaGGCTGTACAGGGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: VIGENLDMLSLPHLLIHWNLEMT*AVQGLH
Trigger: ATGCAGGCCCTGTACAGCCAAGGTCATTTCAAGGTT...CCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTCCCCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp CACCTGATTCAGACCACAGCAGTCACAAGGCTCTGGGGCAGATTCCTTGGAGGAATAGAAAGTTTGGGGTaGAATGCGTGGCAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: HLIQTTAVTRLWGRFLGGIESLG*NAWQVE
Trigger: TTCTACTTGCCACGCATTCAACCCCAAACTTTCTAT...TCCTCCAAGGAATCTGCCCCAGAGCCTTGTGACTGCTGTGGTCTGAATCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CAA 90 bp AGTCTGCTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTGAATTGATAGAAAGTTaGGGGTTGAATGCGTGGCAA +
Preference number: 5 (lower is better)
Translates to: SLLVGERPLKFLPLATWLELIES*GLNAWQ
Trigger: TTGCCACGCATTCAACCCCAAACTTTCTATCAATTC...AAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CAA 90 bp ATCAAGGCTGCAGTGAGCTGTGATTGTACTCTAAGCCTGGGTGACAGAGTAAGTTGGAAACAGATGATGTaGACTCCACACATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: IKAAVSCDCTLSLGDRVSWKQMM*TPHIAA
Trigger: GGCTGCAATGTGTGGAGTCAACATCATCTGTTTCCA...ACTTACTCTGTCACCCAGGCTTAGAGTACAATCACAGCTCACTGCAGCCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CAA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCATCGTGGCCGAGGGGTaGAAGATGATCTCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTIVAEG*KMISAP
Trigger: CGGGGCTGAGATCATCTTCAACCCCTCGGCCACGAT...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp AGTCTGCTGGTGGGAGAGAGGCCTCTTAAGTTCTTACCTCTGGCCACTTGGCTTATGAGAGAGTTAAACTaGTATTCAACATGGATGCCG +
Preference number: 5 (lower is better)
Translates to: SLLVGERPLKFLPLATWLMRELN*YSTWMP
Trigger: CGGCATCCATGTTGAATACAAGTTTAACTCTCTCAT...AAGCCAAGTGGCCAGAGGTAAGAACTTAAGAGGCCTCTCTCCCACCAGCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS-3UTR CAA 90 bp GAGAACCTGGACATGTTAAGCCTGCCACACTTGCTAATCCACTGGGGCAGAGGTTTTCTAGAACCACTTTaGGCACCAAAATCTGTATCA +
Preference number: 5 (lower is better)
Translates to: ENLDMLSLPHLLIHWGRGFLEPL*APKSVS
Trigger: TGATACAGATTTTGGTGCCAAAAGTGGTTCTAGAAA...ACCTCTGCCCCAGTGGATTAGCAAGTGTGGCAGGCTTAACATGTCCAGGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCATGATCTCAGCCCCGTaGATGCTGTACATAAGCCAG +
Preference number: 5 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTMISAP*MLYISQ
Trigger: CTGGCTTATGTACAGCATCAACGGGGCTGAGATCAT...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS-3UTR CAA 90 bp TTAAAGGTGCAAGAAGGGCCATTAGGTAAAGTGAAAACCTGCAGCACAGAGAGTGGCTTCTGTATTAGGTaGATTACACCCTCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: LKVQEGPLGKVKTCSTESGFCIR*ITPSRN
Trigger: GTTTCTAGAGGGTGTAATCAACCTAATACAGAAGCC...ACTCTCTGTGCTGCAGGTTTTCACTTTACCTAATGGCCCTTCTTGCACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326010.10
CDS-3UTR CAA 90 bp GTCAATTGGGAATGGACTTCTGTCACATCTACAAAATACCTTCACAGAAATACCTACCTGCCCGTCATCTaGAAGTTCCAGACATCATTC +
Preference number: 5 (lower is better)
Translates to: VNWEWTSVTSTKYLHRNTYLPVI*KFQTSF
Trigger: GAATGATGTCTGGAACTTCAAGATGACGGGCAGGTA...GGTATTTCTGTGAAGGTATTTTGTAGATGTGACAGAAGTCCATTCCCAATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS CCA 72 bp GTAAACGGCCCGGCCGCTGCGGGCCCTTGCGGGGGCTaGTTCCAGCAGCAACCGCCGGGCAGGGCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: VNGPAAAGPCGG*FQQQPPGRAPP
Trigger: GGGAGGGGCCCTGCCCGGCGGTTGCTGCTGGAACCAGCCCCCGCAAGGGCCCGCAGCGGCCGGGCCGTTTAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS TCA 72 bp GCCCCTTGGTGTCGGGCCGGGACCCTGGAGAGGTCGTaGGGGAGTCCTGGGCGCGGGCTCCGGGAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: APWCRAGTLERS*GSPGRGLREAA
Trigger: CGCAGCCTCCCGGAGCCCGCGCCCAGGACTCCCTCACGACCTCTCCAGGGTCCCGGCCCGACACCAAGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 72 bp ACCCCTCACCTGCCCCTTGGTGTCGGGCCGGGACCCTaGAGAGGTCGTGAGGGAGTCCTGGGCGCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: TPHLPLGVGPGP*RGREGVLGAGS
Trigger: GGAGCCCGCGCCCAGGACTCCCTCACGACCTCTCCAGGGTCCCGGCCCGACACCAAGGGGCAGGTGAGGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 72 bp GCCGCTACCTGGGTCGCGCGTTCCCACCCCCGGCTTTaGGGCCGCTGGAGCCGAAGGTCAGTTGCTCGCCTG +
Preference number: 6 (lower is better)
Translates to: AATWVARSHPRL*GRWSRRSVARL
Trigger: CAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGTGGGAACGCGCGACCCAGGTAGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CAA 90 bp CGGAGTCCATGCCGCTACCTGGGTCGCGCGTTCCCACCCCCGGCTTaGGGGCCGCTGGAGCCGAAGGTCAGTTGCTCGCCTGCGGTTCCG +
Preference number: 6 (lower is better)
Translates to: RSPCRYLGRAFPPPA*GPLEPKVSCSPAVP
Trigger: CGGAACCGCAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGTGGGAACGCGCGACCCAGGTAGCGGCATGGACTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 72 bp CGGTCCGCCAGTGCTTGTGTCCGCGCACGAACTGCCTaGCCTTTGCCCGCAGTGGGAGGAGGTGCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RSASACVRARTA*PLPAVGGGAQA
Trigger: GGCCTGGGCACCTCCTCCCACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACACAAGCACTGGCGGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382760.2
ENST00000415388.5
CDS GCA 72 bp CCCCCGGCTTTGGGGCCGCTGGAGCCGAAGGTCAGTTaGTCGCCTGCGGTTCCGTGCGCCTCGGTGGAGCTA +
Preference number: 6 (lower is better)
Translates to: PPALGPLEPKVS*SPAVPCASVEL
Trigger: TAGCTCCACCGAGGCGCACGGAACCGCAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 72 bp TGGGTCGCGCGTTCCCACCCCCGGCTTTGGGGCCGCTaGAGCCGAAGGTCAGTTGCTCGCCTGCGGTTCCGT +
Preference number: 6 (lower is better)
Translates to: WVARSHPRLWGR*SRRSVARLRFR
Trigger: ACGGAACCGCAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGTGGGAACGCGCGACCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CAA 72 bp CACTCAGCGCCCGCCATGGCCACGGTCCGCCAGTGCTaGTGTCCGCGCACGAACTGCCTGCCCTTTGCCCGC +
Preference number: 6 (lower is better)
Translates to: HSAPAMATVRQC*CPRTNCLPFAR
Trigger: GCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGCCATGGCGGGCGCTGAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326010.10
ENST00000382760.2
ENST00000415388.5
CDS CAA 72 bp ACCCCCGGCTTTGGGGCCGCTGGAGCCGAAGGTCAGTaGCTCGCCTGCGGTTCCGTGCGCCTCGGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: TPGFGAAGAEGQ*LACGSVRLGGA
Trigger: AGCTCCACCGAGGCGCACGGAACCGCAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CAA 72 bp TGCCGCTACCTGGGTCGCGCGTTCCCACCCCCGGCTTaGGGGCCGCTGGAGCCGAAGGTCAGTTGCTCGCCT +
Preference number: 6 (lower is better)
Translates to: CRYLGRAFPPPA*GPLEPKVSCSP
Trigger: AGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGTGGGAACGCGCGACCCAGGTAGCGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CAA 90 bp AGCGACTTCCACTCAGCGCCCGCCATGGCCACGGTCCGCCAGTGCTaGTGTCCGCGCACGAACTGCCTGCCCTTTGCCCGCAGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SDFHSAPAMATVRQC*CPRTNCLPFARSGR
Trigger: CCTCCCACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGCCATGGCGGGCGCTGAGTGGAAGTCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326010.10
ENST00000382760.2
ENST00000415388.5
CDS TCA 72 bp TCGCCCCTTGCCCTTCGCCTCTCGGTTAGCAAGCGATaGGGCACGCCCCTCCACAGGCGGGACTGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: SPLALRLSVSKR*GTPLHRRDCAE
Trigger: CTCCGCGCAGTCCCGCCTGTGGAGGGGCGTGCCTCATCGCTTGCTAACCGAGAGGCGAAGGGCAAGGGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 72 bp GCCACGGTCCGCCAGTGCTTGTGTCCGCGCACGAACTaGCTGCCCTTTGCCCGCAGTGGGAGGAGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: ATVRQCLCPRTN*LPFARSGRRCP
Trigger: TGGGCACCTCCTCCCACTGCGGGCAAAGGGCAGGCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382760.2
ENST00000415388.5
CDS CCA 72 bp CGCAGCACACGGCCAATCAGCCTCCAGGGCCTCACGTaGGGAGGGGGCGAAAGGATCCGGCGCTTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: RSTRPISLQGLT*GGGERIRRLPF
Trigger: GAAGGGCAAGCGCCGGATCCTTTCGCCCCCTCCCCACGTGAGGCCCTGGAGGCTGATTGGCCGTGTGCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 72 bp ATCCGCCTTCCAGGGCTTCGCGGGTGGGACCGCCCCTaGCCTTTAGCGCTCCTTCGGCACGTGCCAGGACAC +
Preference number: 6 (lower is better)
Translates to: IRLPGLRGWDRP*PLALLRHVPGH
Trigger: GTGTCCTGGCACGTGCCGAAGGAGCGCTAAAGGCCAGGGGCGGTCCCACCCGCGAAGCCCTGGAAGGCGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS TCA 72 bp GGGACTCGCTGCTGGGCTGGGCAGAACCTCTCCTGGTaGATGCCAGAAGGGAGCCGGGGGCCTGGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: GTRCWAGQNLSW*MPEGSRGPGGL
Trigger: AAGCCCACCAGGCCCCCGGCTCCCTTCTGGCATTCACCAGGAGAGGTTCTGCCCAGCCCAGCAGCGAGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498140.1
CDS GCA 72 bp AGCGCTCCTTCGGCACGTGCCAGGACACGTTCCTCTTaGCGCCTCCGCAGCACACGGCCAATCAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SAPSARARTRSS*RLRSTRPISLQ
Trigger: CTGGAGGCTGATTGGCCGTGTGCTGCGGAGGCGGCAAGAGGAACGTGTCCTGGCACGTGCCGAAGGAGCGCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CAA 90 bp CGCGTTCCCACCCCCGGCTTTGGGGCCGCTGGAGCCGAAGGTCAGTaGCTCGCCTGCGGTTCCGTGCGCCTCGGTGGAGCTAATATTGTA +
Preference number: 6 (lower is better)
Translates to: RVPTPGFGAAGAEGQ*LACGSVRLGGANIV
Trigger: TACAATATTAGCTCCACCGAGGCGCACGGAACCGCAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAAGCCGGGGGTGGGAACGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CAA 72 bp AGGGGGCGAAAGGATCCGGCGCTTGCCCTTCGCCCCTaGCCCTTCGCCTCTCGGTTAGCAAGCGATGAGGCA +
Preference number: 6 (lower is better)
Translates to: RGRKDPALALRP*PFASRLASDEA
Trigger: TGCCTCATCGCTTGCTAACCGAGAGGCGAAGGGCAAGGGGCGAAGGGCAAGCGCCGGATCCTTTCGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 72 bp CCCTGCACCCTAGGGCCCCTTTTCAGCCCTGCCCTCTaGCGCGTGTGTGCAAATATGGGCACTTTCCTGCGG +
Preference number: 6 (lower is better)
Translates to: PCTLGPLFSPAL*RVCANMGTFLR
Trigger: CCGCAGGAAAGTGCCCATATTTGCACACACGCGGCAGAGGGCAGGGCTGAAAAGGGGCCCTAGGGTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 72 bp GGGAAGAGTTTCAGTGTCCCACGGGCACGCGGCGGCTaGACCTCTGTCGTCCGGAGCCTTTATGTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: GKSFSVPRARGG*TSVVRSLYVWG
Trigger: TCCCCAGACATAAAGGCTCCGGACGACAGAGGTGCAGCCGCCGCGTGCCCGTGGGACACTGAAACTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CAA 72 bp CAGTGGGAGGAGGTGCCCAGGCCCGGTCAGGCGCCCTaGCCTTTATCTCTTACTCTCGCTCCCAGACAGCTC +
Preference number: 6 (lower is better)
Translates to: QWEEVPRPGQAP*PLSLTLAPRQL
Trigger: GAGCTGTCTGGGAGCGAGAGTAAGAGATAAAGGCAAGGGCGCCTGACCGGGCCTGGGCACCTCCTCCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382760.2
ENST00000415388.5
CDS GCA 72 bp AGTGGGAGGAGGTGCCCAGGCCCGGTCAGGCGCCCTTaGCTTTATCTCTTACTCTCGCTCCCAGACAGCTCA +
Preference number: 6 (lower is better)
Translates to: SGRRCPGPVRRP*LYLLLSLPDSS
Trigger: TGAGCTGTCTGGGAGCGAGAGTAAGAGATAAAGGCAAGGGCGCCTGACCGGGCCTGGGCACCTCCTCCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382760.2
ENST00000415388.5
CDS GCA 72 bp AGGGCCCCTTTTCAGCCCTGCCCTCTGCCGCGTGTGTaGAAATATGGGCACTTTCCTGCGGTAGGGTGCGCT +
Preference number: 6 (lower is better)
Translates to: RAPFQPCPLPRV*KYGHFPAVGCA
Trigger: AGCGCACCCTACCGCAGGAAAGTGCCCATATTTGCACACACGCGGCAGAGGGCAGGGCTGAAAAGGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 72 bp ACCAGCCCCACGTGCACAATGCGGGGTCGTCTCAGCTaGTCCTCCGCTGCTTCAAAGGCATATCCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: TSPTCTMRGRLS*SSAASKAYPCS
Trigger: ACTGCAGGGATATGCCTTTGAAGCAGCGGAGGAGCAGCTGAGACGACCCCGCATTGTGCACGTGGGGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000382760.2
CDS GCA 72 bp TTTGGGGCCGCTGGAGCCGAAGGTCAGTTGCTCGCCTaGGGTTCCGTGCGCCTCGGTGGAGCTAATATTGTA +
Preference number: 6 (lower is better)
Translates to: FGAAGAEGQLLA*GSVRLGGANIV
Trigger: TACAATATTAGCTCCACCGAGGCGCACGGAACCGCAGGCGAGCAACTGACCTTCGGCTCCAGCGGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS TCA 72 bp AGGGTGCCCACTCGATTGATGGCGCAGGTGAAGCAGTaGTTGGCAATGGCTGCGTTTCTGGCCTCGATGGGC +
Preference number: 6 (lower is better)
Translates to: RVPTRLMAQVKQ*LAMAAFLASMG
Trigger: GCCCATCGAGGCCAGAAACGCAGCCATTGCCAATCACTGCTTCACCTGCGCCATCAATCGAGTGGGCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498140.1
CDS GCA 72 bp ACGCGCTTCACTTCCTGCAAGTCGGGGAGCGGCAGGTaGTTCTCCAAGCATTCCTCCAGCGACTTCCACTCA +
Preference number: 6 (lower is better)
Translates to: TRFTSCKSGSGR*FSKHSSSDFHS
Trigger: TGAGTGGAAGTCGCTGGAGGAATGCTTGGAGAAGCACCTGCCGCTCCCCGACTTGCAGGAAGTGAAGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326010.10
ENST00000382760.2
ENST00000415388.5
CDS CAA 90 bp GTGCCATCCCTTCAGGAGCAAAGAAGCGTCCTCTTTGGGGTCCTATaGAGAATTAGGGCAGTAAGGCCCGCTTACTTCGGCGGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: VPSLQEQRSVLFGVL*RIRAVRPAYFGGQP
Trigger: CGGCTGCCCGCCGAAGTAAGCGGGCCTTACTGCCCTAATTCTCAATAGGACCCCAAAGAGGACGCTTCTTTGCTCCTGAAGGGATGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS TCA 72 bp GGCAGTAAGGCCCGCTTACTTCGGCGGGCAGCCGGGTaGAGGAACCAGTCTGTAGAAATCCTATTCAGCCAC +
Preference number: 6 (lower is better)
Translates to: GSKARLLRRAAG*RNQSVEILFSH
Trigger: GTGGCTGAATAGGATTTCTACAGACTGGTTCCTTCACCCGGCTGCCCGCCGAAGTAAGCGGGCCTTACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 72 bp ACCAGCTGGAGGGAATTACAAAAGCCAGAGGTGAGCTaGCAGGGGCTTGGACCAGGTGGTGGTAGAGAGATG +
Preference number: 6 (lower is better)
Translates to: TSWRELQKPEVS*QGLGPGGGREM
Trigger: CATCTCTCTACCACCACCTGGTCCAAGCCCCTGGCAGCTCACCTCTGGCTTTTGTAATTCCCTCCAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS CCA 72 bp AGCAGTGATTGGCAATGGCTGCGTTTCTGGCCTCGATaGGCCACAGGGACTCGCTGTAAGAGAGGACCAAGA +
Preference number: 6 (lower is better)
Translates to: SSDWQWLRFWPR*ATGTRCKRGPR
Trigger: TCTTGGTCCTCTCTTACAGCGAGTCCCTGTGGCCCATCGAGGCCAGAAACGCAGCCATTGCCAATCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486043.1
CDS GCA 72 bp GTGCACAATGCGGGGTCGTCTCAGCTGCTCCTCCGCTaGTTCAAAGGCATATCCCTGCAGTTCAAAGTCTTC +
Preference number: 6 (lower is better)
Translates to: VHNAGSSQLLLR*FKGISLQFKVF
Trigger: GAAGACTTTGAACTGCAGGGATATGCCTTTGAAGCAGCGGAGGAGCAGCTGAGACGACCCCGCATTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000382760.2
CDS GCA 72 bp CCCTCTGCCGCGTGTGTGCAAATATGGGCACTTTCCTaGGGTAGGGTGCGCTTTAAACTGTCACTGAGATGG +
Preference number: 6 (lower is better)
Translates to: PSAACVQIWALS*GRVRFKLSLRW
Trigger: CCATCTCAGTGACAGTTTAAAGCGCACCCTACCGCAGGAAAGTGCCCATATTTGCACACACGCGGCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CCA 72 bp AAAGAAGTCCTGGTCAGGAGGGCACAGGAGACCAGCTaGAGGGAATTACAAAAGCCAGAGGTGAGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: KEVLVRRAQETS*RELQKPEVSCQ
Trigger: CTGGCAGCTCACCTCTGGCTTTTGTAATTCCCTCCAGCTGGTCTCCTGTGCCCTCCTGACCAGGACTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS CCA 72 bp TTTTCAGCCCTGCCCTCTGCCGCGTGTGTGCAAATATaGGCACTTTCCTGCGGTAGGGTGCGCTTTAAACTG +
Preference number: 6 (lower is better)
Translates to: FSALPSAACVQI*ALSCGRVRFKL
Trigger: CAGTTTAAAGCGCACCCTACCGCAGGAAAGTGCCCATATTTGCACACACGCGGCAGAGGGCAGGGCTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS GCA 72 bp CTCAGCTGCTCCTCCGCTGCTTCAAAGGCATATCCCTaGAGTTCAAAGTCTTCTCTGGAGGCAGCTTCGAAA +
Preference number: 6 (lower is better)
Translates to: LSCSSAASKAYP*SSKSSLEAASK
Trigger: TTTCGAAGCTGCCTCCAGAGAAGACTTTGAACTGCAGGGATATGCCTTTGAAGCAGCGGAGGAGCAGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000382760.2
CDS CAA 72 bp CTTCAGGAGCAAAGAAGCGTCCTCTTTGGGGTCCTATaGAGAATTAGGGCAGTAAGGCCCGCTTACTTCGGC +
Preference number: 6 (lower is better)
Translates to: LQEQRSVLFGVL*RIRAVRPAYFG
Trigger: GCCGAAGTAAGCGGGCCTTACTGCCCTAATTCTCAATAGGACCCCAAAGAGGACGCTTCTTTGCTCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS TCA 72 bp ATTGCAGCCACCTCTACGATAGCCTTTATGCGTCTATaGAGGGCAGAGACCTGTTCTGCCACAGGGGCATTT +
Preference number: 6 (lower is better)
Translates to: IAATSTIAFMRL*RAETCSATGAF
Trigger: AAATGCCCCTGTGGCAGAACAGGTCTCTGCCCTTCATAGACGCATAAAGGCTATCGTAGAGGTGGCTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000382760.2
CDS TCA 72 bp CACTTTCCTGCGGTAGGGTGCGCTTTAAACTGTCACTaGGATGGTAGGAGTGAGAGCCCCATTTGCTGTTAC +
Preference number: 6 (lower is better)
Translates to: HFPAVGCALNCH*DGRSESPICCY
Trigger: GTAACAGCAAATGGGGCTCTCACTCCTACCATCTCAGTGACAGTTTAAAGCGCACCCTACCGCAGGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415388.5
CDS CAA 72 bp GGACGGAGAATCCATGCTTCCTGGAAACAGATGATGTaGACTCCACACATTGCAGCCACCTCTACGATAGCC +
Preference number: 6 (lower is better)
Translates to: GRRIHASWKQMM*TPHIAATSTIA
Trigger: GGCTATCGTAGAGGTGGCTGCAATGTGTGGAGTCAACATCATCTGTTTCCAGGAAGCATGGATTCTCCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382760.2
CDS CAA 90 bp CAGAAGGCAAAGGGCATAGTCCATGCTTCCTGGAAACAGATGATGTaGACTCCACACATTGCAGCCACCTCTACGATAGCCTTTATGCGT +
Preference number: 6 (lower is better)
Translates to: QKAKGIVHASWKQMM*TPHIAATSTIAFMR
Trigger: ACGCATAAAGGCTATCGTAGAGGTGGCTGCAATGTGTGGAGTCAACATCATCTGTTTCCAGGAAGCATGGACTATGCCCTTTGCCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326010.10
ENST00000415388.5
CDS TCA 72 bp AGAGGAGCGAATGGATTCAGAACGATGTGGGAAAACTaGAGGAATCAGACAACAGCTCGGTGCGTAACAGCA +
Preference number: 6 (lower is better)
Translates to: RGANGFRTMWEN*RNQTTARCVTA
Trigger: TGCTGTTACGCACCGAGCTGTTGTCTGATTCCTTCAGTTTTCCCACATCGTTCTGAATCCATTCGCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382760.2