RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNKL (Homo sapiens)

Ensembl gene IDs: ENSG00000059145

Ensembl transcript IDs: ENST00000248104.11, ENST00000301712.5, ENST00000382757.9, ENST00000389221.9, ENST00000397464.5, ENST00000402641.6, ENST00000403703.5, ENST00000502438.6, ENST00000503648.1, ENST00000508903.7, ENST00000509981.1, ENST00000511095.2, ENST00000513783.1, ENST00000515195.1, ENST00000562537.1, ENST00000566707.1, ENST00000674376.1

Found 917 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCGCAGGACAGCACCGTGGGCCCGCTCCCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAGATCACGCCGTCCACCGCCTCCAGG +
Preference number: 1 (lower is better)
Translates to: GRRTAPWARSRQATH*LARSWKITPSTASR
Trigger: CCTGGAGGCGGTGGACGGCGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGTCCTGCGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR TCA 90 bp CACTCAGGTGCGGTGGCCGCACACGGCTCACAGAGGATGTGGTGCTaGCAGGGCCGCAGGACAGCACCGTGGGCCCGCTCCCGGCAGGCC +
Preference number: 1 (lower is better)
Translates to: HSGAVAAHGSQRMWC*QGRRTAPWARSRQA
Trigger: GGCCTGCCGGGAGCGGGCCCACGGTGCTGTCCTGCGGCCCTGTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 90 bp GGCTGCAGATCCGGGACCCCTTCCCCGCCGCCCAGCTGGCCGTTCTaGAAGGCTTCCTGGGCCTGCAGCTCCCTGACGTCACACACGGGC +
Preference number: 1 (lower is better)
Translates to: GCRSGTPSPPPSWPF*KASWACSSLTSHTG
Trigger: GCCCGTGTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGCCTTGCAGAACGGCCAGCTGGGCGGCGGGGAAGGGGTCCCGGATCTGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR CCA 90 bp AGCGCGGGTCAGGTGACTGCCACATACACCCGGCACCCCGGACCCTaGCGCACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGG +
Preference number: 1 (lower is better)
Translates to: SAGQVTATYTRHPGP*RTHGPSISHTSRTR
Trigger: CCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 90 bp AGCTGCCGGTCGCTATCGGCCACACGGGCACGCTCCTTGGCCTCCTaGGCCTCTCGCTGCCAGGCATCGCAGACCTGCTTCACCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SCRSLSATRARSLAS*ASRCQASQTCFTCC
Trigger: GCAGCAGGTGAAGCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGTGGCCGATAGCGACCGGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR TCA 90 bp AGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCC +
Preference number: 1 (lower is better)
Translates to: RAPSLGPHVGGTRSE*RHVRGQEERWSQGA
Trigger: GGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR GCA 90 bp GGCGGCACAGGCGTGGCGGCTTCGGGCACTGCTCCGTCTTGTAGCTaGCCAGCACGAAGTTGGCATCTTGCCACCGGGGGTCCTCGCTCA +
Preference number: 1 (lower is better)
Translates to: GGTGVAASGTAPSCS*PARSWHLATGGPRS
Trigger: TGAGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGCAGTGCCCGAAGCCGCCACGCCTGTGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR CCA 90 bp GGCGCACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGGGTaGTCACGGGTGCTGGGGAGGCAACCACTCTCCCAGTTCACTGCC +
Preference number: 1 (lower is better)
Translates to: GAHTARASPTRAGPG*SRVLGRQPLSQFTA
Trigger: GGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR CCA 90 bp ACCACTGCAGGGGCTGGCCCTTGCAGTAGGGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGAGGATGTGGTGCTGACAGGGCCGCA +
Preference number: 1 (lower is better)
Translates to: TTAGAGPCSRGTQVR*PHTAHRGCGADRAA
Trigger: TGCGGCCCTGTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGCAGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 90 bp AGGTCACCACTGCAGGGGCTGGCCCTTGCAGTAGGGGCACTCAGGTaGGGTGGCCGCACACGGCTCACAGAGGATGTGGTGCTGACAGGG +
Preference number: 1 (lower is better)
Translates to: RSPLQGLALAVGALR*GGRTRLTEDVVLTG
Trigger: CCCTGTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGCAGTGGTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR CCA 90 bp CCCGAGCATCTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCTaGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAG +
Preference number: 1 (lower is better)
Translates to: PEHLPHEQDQGGHGC*GGNHSPSSLPDPCQ
Trigger: CTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR TCA 90 bp AGCTGGAAGATCACGCCGTCCACCGCCTCCAGGTCCAGGCGCAGCTaGCTCTGCAGCGAGTGCAGCTTCGGCAGGGGAATGGTGCCGATG +
Preference number: 1 (lower is better)
Translates to: SWKITPSTASRSRRS*LCSECSFGRGMVPM
Trigger: CATCGGCACCATTCCCCTGCCGAAGCTGCACTCGCTGCAGAGTCAGCTGCGCCTGGACCTGGAGGCGGTGGACGGCGTGATCTTCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 90 bp ACATGGATGAGCTCCGATGATAACTGGCAGCGCGGGTCAGGTGACTaGCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCC +
Preference number: 1 (lower is better)
Translates to: TWMSSDDNWQRGSGD*HIHPAPRTLAHTRP
Trigger: GGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCGCTGCCAGTTATCATCGGAGCTCATCCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR CCA 90 bp AACACGTCGGTGCCGCTTCCCACTCGTGTGCCCTCACCACCCACGTaGCCCGCGGAGAGCCAGGTCGCCGTAAACCACAGATGCCTGTTC +
Preference number: 1 (lower is better)
Translates to: NTSVPLPTRVPSPPT*PAESQVAVNHRCLF
Trigger: GAACAGGCATCTGTGGTTTACGGCGACCTGGCTCTCCGCGGGCCACGTGGGTGGTGAGGGCACACGAGTGGGAAGCGGCACCGACGTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCC +
Preference number: 1 (lower is better)
Translates to: PSSQWPSHSSVRTTN*CDHSAAWIPEAPGP
Trigger: GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR CCA 90 bp CACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGCCCCTCAGGGACAGGCAGGCGGGTT +
Preference number: 1 (lower is better)
Translates to: HSSVRTTNCCDHSAA*IPEAPGPSGTGRRV
Trigger: AACCCGCCTGCCTGTCCCTGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR CCA 90 bp CCTGAGGGGCGGGCGCCACCTCCTTCCCAGAAAGAGCAGAGCAGCTaGCAGACTAGAGCTCAGCTGCTCCTGACCACTGACAACCGGGAG +
Preference number: 1 (lower is better)
Translates to: PEGRAPPPSQKEQSS*QTRAQLLLTTDNRE
Trigger: CTCCCGGTTGTCAGTGGTCAGGAGCAGCTGAGCTCTAGTCTGCCAGCTGCTCTGCTCTTTCTGGGAAGGAGGTGGCGCCCGCCCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 90 bp AAGGGTCAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTGCTaGGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGG +
Preference number: 1 (lower is better)
Translates to: KGQVIAGMRSQSRFC*GRNHTVAPGADGTG
Trigger: CCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR TCA 90 bp TGGTCACGGGTGCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTaGCCCCTGCCAGGACGCCCAGCGACATCTCCAAGGAGCTACAAA +
Preference number: 1 (lower is better)
Translates to: WSRVLGRQPLSQFTA*PLPGRPATSPRSYK
Trigger: TTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 90 bp GGGTGCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTaGCAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCAT +
Preference number: 1 (lower is better)
Translates to: GCWGGNHSPSSLPDP*QDAQRHLQGATKHH
Trigger: ATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 90 bp CAGAAGGGTCAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTaGTGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACA +
Preference number: 1 (lower is better)
Translates to: QKGQVIAGMRSQSRF*CGRNHTVAPGADGT
Trigger: TGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 90 bp GGGACAGTCCCAGCCCTGAGCAGAAGGGTCAGGTCATCGCGGGGATaGGTTCTCAGTCACGTTTCTGCTGCGGCCGAAACCACACTGTCG +
Preference number: 1 (lower is better)
Translates to: GTVPALSRRVRSSRG*VLSHVSAAAETTLS
Trigger: CGACAGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACCCTTCTGCTCAGGGCTGGGACTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 90 bp ATTAAAAGTCTTTGGCAAAGCCACGGTCGGGGAGAAACACGTCGGTaGCGCTTCCCACTCGTGTGCCCTCACCACCCACGTGGCCCGCGG +
Preference number: 1 (lower is better)
Translates to: IKSLWQSHGRGETRR*RFPLVCPHHPRGPR
Trigger: CCGCGGGCCACGTGGGTGGTGAGGGCACACGAGTGGGAAGCGGCACCGACGTGTTTCTCCCCGACCGTGGCTTTGCCAAAGACTTTTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR CCA 90 bp TCTCCTGTGACCTCACTGGCCACATGGATGAGCTCCGATGATAACTaGCAGCGCGGGTCAGGTGACTGCCACATACACCCGGCACCCCGG +
Preference number: 1 (lower is better)
Translates to: SPVTSLATWMSSDDN*QRGSGDCHIHPAPR
Trigger: CCGGGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCGCTGCCAGTTATCATCGGAGCTCATCCATGTGGCCAGTGAGGTCACAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR CCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCG +
Preference number: 1 (lower is better)
Translates to: ITCNRKGSQPRSSRR*HQKRVTTCPWSGGA
Trigger: CGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR CCA 90 bp GTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCTaGACACAGACAGGGCCTCAGGGAGGCCAAGGCCATGGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: VIQKRRGWLSAQRKS*TQTGPQGGQGHGPG
Trigger: GCCTGGGCCATGGCCTTGGCCTCCCTGAGGCCCTGTCTGTGTCCAGCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR CCA 90 bp CCGGGGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTaGCTCTCTGCTCAAAGGAAGAGCTGGACACAGACAGGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: PGHARQHQVIQKRRG*LSAQRKSWTQTGPQ
Trigger: CTGAGGCCCTGTCTGTGTCCAGCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR TCA 90 bp CCCAGAAAGAGCAGAGCAGCTGGCAGACTAGAGCTCAGCTGCTCCTaGCCACTGACAACCGGGAGATGTCTCGGCAGACACCACTTATCC +
Preference number: 1 (lower is better)
Translates to: PRKSRAAGRLELSCS*PLTTGRCLGRHHLS
Trigger: GGATAAGTGGTGTCTGCCGAGACATCTCCCGGTTGTCAGTGGTCAGGAGCAGCTGAGCTCTAGTCTGCCAGCTGCTCTGCTCTTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 90 bp TTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTaGTCACCTGTCCTCAGAGCCAGTACTGATCTAGGGGAGCAGGTG +
Preference number: 1 (lower is better)
Translates to: FPTLAALPAILWSSH*SPVLRASTDLGEQV
Trigger: CACCTGCTCCCCTAGATCAGTACTGGCTCTGAGGACAGGTGAGCAGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR TCA 90 bp TACAGCCGTTCAGGTCCTTTACTCGGAAGCTGCTCAGAGGGAGACTaGACGTGGCATAACAACAAGGAGTGGGGCGTCCTTCCCAAAGGA +
Preference number: 1 (lower is better)
Translates to: YSRSGPLLGSCSEGD*TWHNNKEWGVLPKG
Trigger: TCCTTTGGGAAGGACGCCCCACTCCTTGTTGTTATGCCACGTTCAGTCTCCCTCTGAGCAGCTTCCGAGTAAAGGACCTGAACGGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR TCA 90 bp GTTTTTGAGGAAAATACCTTGAAACCGTCGGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGG +
Preference number: 1 (lower is better)
Translates to: VFEENTLKPSVGLDR*QRVTGKAVRPSAGG
Trigger: CCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACGTTGTCACCTATCTAGTCCTACCGACGGTTTCAAGGTATTTTCCTCAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR CCA 90 bp TTTCTTTCCATGACGGGCGATGACAAAATCTCAGACACTAATTTGTaGTTTGTTCTACAGCCGTTCAGGTCCTTTACTCGGAAGCTGCTC +
Preference number: 1 (lower is better)
Translates to: FLSMTGDDKISDTNL*FVLQPFRSFTRKLL
Trigger: GAGCAGCTTCCGAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCATCGCCCGTCATGGAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR TCA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCGTCCAGCTGCCGCCTaGCCCGGGCCAGCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHRPAAA*PGPAQL
Trigger: GAGCTGAGCTGGCCCGGGTCAGGCGGCAGCTGGACG...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp GGGGGTCGCTTCCCCCGTGTGCTCCAGGCCACTGAGAGGCTGTGGCCGGGTCCTCGGGCTGGAGTGCGGTaGCGCGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GGRFPRVLQATERLWPGPRAGVR*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCCG...AGGACCCGGCCACAGCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCTTGGCCTCGTCCAGCTaGCGCCTGACCCGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: AGEATTLPVHCLTPARTPLASSS*RLTRAS
Trigger: GCTGGCCCGGGTCAGGCGGCAGCTGGACGAGGCCAA...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp CAGGGCCGCAGGACAGCACCGTGGGCCCGCTCCCGGCAGGCCACACACTGCTTGGCTTCGGCAGGGGAATaGTGCCGATGTCCCCACAGC +
Preference number: 2 (lower is better)
Translates to: QGRRTAPWARSRQATHCLASAGE*CRCPHS
Trigger: GCTGTGGGGACATCGGCACCATTCCCCTGCCGAAGC...CAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGTCCTGCGGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR TCA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATTCCCAGTTCACTGCCTaGCCCCTGCCAGGACGCCCA +
Preference number: 2 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHSQFTA*PLPGRP
Trigger: TGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGA...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp CAGGGCCGCAGGACAGCACCGTGGGCCCGCTCCCGGCAGGCCACACACTGCTTGGCGTGGGGGAACCTGTaGGCAGCAGGTCATGTGGTT +
Preference number: 2 (lower is better)
Translates to: QGRRTAPWARSRQATHCLAWGNL*AAGHVV
Trigger: AACCACATGACCTGCTGCTCACAGGTTCCCCCACGC...CAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGTCCTGCGGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATGGTGGTCACGGGTGCTaGGGAGGCAACCACTCTCCC +
Preference number: 2 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHGGHGC*GGNHSP
Trigger: GGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCACC...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp ACCGCCGGGGGTTGCGCCGCCTGTCCCGGCTATTGTGGTAGTGTGGGCACGCATTCCCCGCCGCCCAGCTaGCCGTTCTGCAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: TAGGCAACPGYCGSVGTHSPPPS*PFCKAS
Trigger: GGAAGCCTTGCAGAACGGCCAGCTGGGCGGCGGGGA...ATGCGTGCCCACACTACCACAATAGCCGGGACAGGCGGCGCAACCCCCGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR-3UTR CCA 90 bp GAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACGCAGCCCCGGCAGTGTaGAGGCTACGCCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: EATTLPVHCLTPARTPSDAAPAV*RLRPGP
Trigger: AGGGCCTGGGCGTAGCCTCCACACTGCCGGGGCTGC...GTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR GCA 90 bp TGCTGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACTCCTGCGCCTCTCGCTaGCAGGCATCGCAGACCTGC +
Preference number: 2 (lower is better)
Translates to: CCGRNHTVAPGADGTGDHSCASR*QASQTC
Trigger: GCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGA...GTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp GCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACAGGGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGC +
Preference number: 2 (lower is better)
Translates to: APTPRGWNISPSAWCTHRDHSAA*IPEAPG
Trigger: GCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATC...CCTGTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR GCA 90 bp GAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACCGCGGGTCAGGTGACTaGCACATACACCCGGCACCC +
Preference number: 2 (lower is better)
Translates to: EATTLPVHCLTPARTPSDRGSGD*HIHPAP
Trigger: GGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCG...GTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATGGAGAAACACGTCGGTaGCGCTTCCCACTCGTGTGC +
Preference number: 2 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHGETRR*RFPLVC
Trigger: GCACACGAGTGGGAAGCGGCACCGACGTGTTTCTCC...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp TGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGAGGGTTCCCAAGGCTTCCTGGGCCTaGAGCTCCCTGACGTCACAC +
Preference number: 2 (lower is better)
Translates to: CGSGNTGSRRRHRSVRVPKASWA*SSLTSH
Trigger: GTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGCCTT...GGGAACCCTCACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR-3UTR GCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGTCGGCAGGGGAATGGTaGCGATGTCCCCACAGCCCC +
Preference number: 2 (lower is better)
Translates to: APEASDDMSVVRRSAGARSAGEW*RCPHSP
Trigger: GGGGCTGTGGGGACATCGGCACCATTCCCCTGCCGA...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGC +
Preference number: 2 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQDHSAA*IPEAPG
Trigger: GCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATC...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGCCCACGCCACGAGGCTaGAACATCAGCCCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQPTPRG*NISPSA
Trigger: GGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGG...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR CCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCCACGGGCACGCTCCTTaGCCTCCTGCGCCTCTCGCT +
Preference number: 2 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCHGHAP*PPAPLA
Trigger: AGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTG...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGA +
Preference number: 2 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTGTQVR*PHTAHR
Trigger: TCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCC...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR TCA 90 bp CAGCCCCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTCCCAGTTCACTGCCTaGCCCCTGCCAGGACGCCCA +
Preference number: 2 (lower is better)
Translates to: QPQDLAPISNPGSAASHSSQFTA*PLPGRP
Trigger: TGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGA...AGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp ACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTCACCCGGGCTGGAGTaGGGTGGCGCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: TPARTPSDISKELQSTIASPGLE*GGAISA
Trigger: AGCCGAGATCGCGCCACCGCACTCCAGCCCGGGTGA...GGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCAGCTCCTCCTGCAGCTaGTTCACCTGTGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: APSLALRGAGAQKQRPRTSSSCS*FTCAST
Trigger: GGTGGAGGCACAGGTGAAGCAGCTGCAGGAGGAGCT...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp TGCTCCGTGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGAGTTCTCAATCATGGCCTaGCTGGCCAAGACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: CSVREWQYWQPSPPSQREFSIMA*LAKTPG
Trigger: GCCTGGGGTCTTGGCCAGCCAGGCCATGATTGAGAA...CTCACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR-3UTR CCA 90 bp TGCTCCGTGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGAGGCTATTGTGGTAGTGTaGGCACGCATAGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: CSVREWQYWQPSPPSQREAIVVV*ARIALA
Trigger: CGCCAGGGCTATGCGTGCCCACACTACCACAATAGC...CTCACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR-3UTR TCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACTCCTGACCTTAGGTaGTCCACCCGCCTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: APSLALRGAGAQKQRPRTTPDLR*STRLPK
Trigger: CTTTGGGAGGCGGGTGGATCACCTAAGGTCAGGAGT...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR TCA 90 bp TGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACAGCCACTGGCCACATGGATaGGCTCCGATGATAACTGGC +
Preference number: 2 (lower is better)
Translates to: CGRNHTVAPGADGTGDHSHWPHG*APMITG
Trigger: GCCAGTTATCATCGGAGCTCATCCATGTGGCCAGTG...GCTGTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATGCCGTAAACCACAGATaGCTGTTCCTGCTCAACTCC +
Preference number: 2 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHAVNHR*LFLLNS
Trigger: GGAGTTGAGCAGGAACAGGCATCTGTGGTTTACGGC...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp TGCTCCGTGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGAGGCTCCGTCTTGTAGCTaGCCAGCACGAAGTTGGCAT +
Preference number: 2 (lower is better)
Translates to: CSVREWQYWQPSPPSQREAPSCS*PARSWH
Trigger: ATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGC...CTCACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR-3UTR GCA 90 bp CTCAGGTGCGGTGGCCGCACACGGCTCACAGAGGATGTGGTGCTGACAGGGCCGAGCTCCGTTTGGACTTaGACTCGAAGAGGATGGGGG +
Preference number: 2 (lower is better)
Translates to: LRCGGRTRLTEDVVLTGPSSVWT*TRRGWG
Trigger: CCCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCT...CGGCCCTGTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR GCA 90 bp GGTCAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTGCTGCGGCCGAAACCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: GQVIAGMRSQSRFCCGRNRQATH*LARSWK
Trigger: CTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCG...GTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp CAGCCCCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTCGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACG +
Preference number: 2 (lower is better)
Translates to: QPQDLAPISNPGSAASHSRSSRR*HQKRVT
Trigger: CGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG...AGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACCAGCTCAGCTCCGTTTaGACTTGCACTCGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHQLSSV*TCTRRG
Trigger: TCCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTG...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR TCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPGTRSE*RHVRGQ
Trigger: CTGACCACGGACATGTCGTCACTCGCTTCTGGTGCC...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR TCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 2 (lower is better)
Translates to: APEASDDMSVVRRSAGARDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR TCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACGCAGCGCGGGTCAGGTaGCTGCCACATACACCCGGC +
Preference number: 2 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDAARVR*LPHTPG
Trigger: GCCGGGTGTATGTGGCAGTCACCTGACCCGCGCTGC...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp CAGCCCCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTGGACAGTCCCAGCCCTaGGCAGAAGGGTCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: QPQDLAPISNPGSAASHSGQSQP*AEGSGH
Trigger: ATGACCTGACCCTTCTGCTCAGGGCTGGGACTGTCC...AGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCG +
Preference number: 2 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQVRTTN*CDHSAA
Trigger: CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR GCA 90 bp CCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTGCTCACTGCCTGACCCCTaGCAGGACGCCCAGCGACAT +
Preference number: 2 (lower is better)
Translates to: PPFPTLAALPAILWSSHCSLPDP*QDAQRH
Trigger: ATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGA...GCAGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp TGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTCGCTTCCCACTCGTGTaGCCTCACCACCCACGTGGC +
Preference number: 2 (lower is better)
Translates to: CPHFQPWQRCQPFFGLPTRFPLV*PHHPRG
Trigger: GCCACGTGGGTGGTGAGGGCACACGAGTGGGAAGCG...AGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp GCGTCCTTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCGAGGCAGCACCAGCGAGGGTGGCTCTCTaGTCAAAGGAAGAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: ASFPKEAQVLSGACEAAPARVAL*SKEELD
Trigger: GTCCAGCTCTTCCTTTGAGCAGAGAGCCACCCTCGC...TGGTGCTGCCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR GCA 90 bp GGCTGTGGCCGGGTCCTCTCCTGTGACCTCACTGGCCACATGGATGAGCTCCGAGGCTGGGGGAGAAGCTaGCGGAAACAAAGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: GCGRVLSCDLTGHMDELRGWGRS*RKQSPR
Trigger: TCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC...TCGGAGCTCATCCATGTGGCCAGTGAGGTCACAGGAGAGGACCCGGCCACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp CCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTGCTGCTTGGCGCGGAGCTaGAAGATCACGCCGTCCACC +
Preference number: 2 (lower is better)
Translates to: PPFPTLAALPAILWSSHCCLARS*KITPST
Trigger: GGTGGACGGCGTGATCTTCCAGCTCCGCGCCAAGCA...GCAGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCA +
Preference number: 2 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDRPHTA*RGAGRS
Trigger: TGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCT...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR TCA 90 bp GAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATAGGTGACAACGTGTaGCAGGAAAGGCTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: EATTLPVHCLTPARTPSDIGDNV*QERLSG
Trigger: GCCTGACAGCCTTTCCTGTCACACGTTGTCACCTAT...GTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 2 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR TCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 2 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR GCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCACACGGACCACAGAAATaGAGGACGGAGCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPHGPQK*RTELSC
Trigger: GCAGGAGAGCTCCGTCCTGCATTTCTGTGGTCCGTG...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR GCA 90 bp CTGAGCAGAAGGGTCAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTGCTGTCGCTTCCCCCGTGTaGTCCAGGCCACTGAGAGGC +
Preference number: 2 (lower is better)
Translates to: LSRRVRSSRGCVLSHVSAVASPV*SRPLRG
Trigger: GCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGAC...AGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACCCTTCTGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp ACGAAGTTGGCATCTTGCCACCGGGGGTCCTCGCTCAGGATCTTCTCAATCATGAGGTCCAGGGGGCCGTaGGCGAAGGCACAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: TKLASCHRGSSLRIFSIMRSRGP*AKAQCS
Trigger: GCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCT...CATGATTGAGAAGATCCTGAGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR-3UTR CCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 2 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGDPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR CCA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 2 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQDPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: QATRTCRAGRQPAPTPRAVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp ACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCACTCCTGACCTTAGGTaGTCCACCCGCCTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: TPARTPSDISKELQSTIATPDLR*STRLPK
Trigger: CTTTGGGAGGCGGGTGGATCACCTAAGGTCAGGAGT...GGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp TCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCGCTGCTCCTGACCACTaGCAACCGGGAGATGTCTCG +
Preference number: 2 (lower is better)
Translates to: SCPHFQPWQRCQPFFGLPAAPDH*QPGDVS
Trigger: CGAGACATCTCCCGGTTGTCAGTGGTCAGGAGCAGC...GGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp TGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTGAGCTCAGCTGCTCCTaGCCACTGACAACCGGGAGA +
Preference number: 2 (lower is better)
Translates to: CPHFQPWQRCQPFFGLPTELSCS*PLTTGR
Trigger: TCTCCCGGTTGTCAGTGGTCAGGAGCAGCTGAGCTC...AGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACCCTAGGAGCCATCCCTaGGGCCATGGCCACCAAGAC +
Preference number: 2 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDPRSHP*GHGHQD
Trigger: GTCTTGGTGGCCATGGCCTCAGGGATGGCTCCTAGG...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGAGGACGGAGCTCTCCTaGTCCCACGCCACGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQRTELS*SHATRL
Trigger: CAGCCTCGTGGCGTGGGAGCAGGAGAGCTCCGTCCT...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR GCA 90 bp ACAAGGAGTGGGGCGTCCTTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCCTCTCAGGTGCAAACTaGAGACAGGAGGCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: TRSGASFPKEAQVLSGACLSGAN*RQEASQ
Trigger: CTGGCTTGCCTCCTGTCTGCAGTTTGCACCTGAGAG...GCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGACGCCCCACTCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR GCA 90 bp GGGGCCGCGCGGGCAGTACCCGGTTTGGCGCATGTCGTTGCATTTTGTAGATTTTCGGGATGGAACTGCTaGTCCGTGCGGGAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: GAARAVPGLAHVVAFCRFSGWNC*SVREWQ
Trigger: TTGCCACTCCCGCACGGAGCAGCAGTTCCATCCCGA...AAATCTACAAAATGCAACGACATGCGCCAAACCGGGTACTGCCCGCGCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR-3UTR CCA 90 bp TCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: SCPHFQPWQRCQPFFGLPVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...GGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCCCACGCCACGAGGCTaGAACATCAGCCCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQPTPRG*NISPSA
Trigger: GGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGG...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR CCA 90 bp GCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACCGGGCTGGAGTGCGGTaGCGCGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: AEQGLLTTVTHVVTPLYHRAGVR*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCCG...GTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAATAGGTGACAACGTGTaGCAGGAAAGGCTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPIGDNV*QERLSG
Trigger: GCCTGACAGCCTTTCCTGTCACACGTTGTCACCTAT...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR TCA 90 bp GCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACAGGGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: APTPRGWNISPSAWCTHRVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...CCTGTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR TCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR TCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR TCA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCTGCCTAGGACAGCTCTaGGTAATCAGAAAACAGCTT +
Preference number: 2 (lower is better)
Translates to: QATRTCRAGRQPAPTPRACLGQL*VIRKQL
Trigger: AAGCTGTTTTCTGATTACTCAGAGCTGTCCTAGGCA...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGCTTCCCACTCGTGTaGCCTCACCACCCACGTGGC +
Preference number: 2 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECRFPLV*PHHPRG
Trigger: GCCACGTGGGTGGTGAGGGCACACGAGTGGGAAGCG...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAAVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR CCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACG +
Preference number: 2 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQRSSRR*HQKRVT
Trigger: CGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR CCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCCCACGCCACGAGGCTaGAACATCAGCCCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECPTPRG*NISPSA
Trigger: GGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGG...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTGCCGGATCTTCCTCTTaGCCTCGTCCAGCTGCCGCC +
Preference number: 2 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECAGSSS*PRPAAA
Trigger: GGCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGC...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR TCA 90 bp CAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTAGGACAGACTCCTGACCTTAGGTaGTCCACCCGCCTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: QDAQRHLQGATKHHCLGQTPDLR*STRLPK
Trigger: CTTTGGGAGGCGGGTGGATCACCTAAGGTCAGGAGT...CTGTCCTAGGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp GATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGATCCCAGTTCACTGCCTaGCCCCTGCCAGGACGCCCA +
Preference number: 2 (lower is better)
Translates to: DVSADTTYPRKDQRLQMGSQFTA*PLPGRP
Trigger: TGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGA...TCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACAGGTGGCTGTCCCCGCTaGGGTCACCACTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTGGCPR*GHHCRG
Trigger: GCCCCTGCAGTGGTGACCTCAGCGGGGACAGCCACC...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCGGAAGCTGAGCCCTaGAGACACCCTGAGGGGCGG +
Preference number: 2 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWEPEAEP*RHPEGR
Trigger: CCGCCCCTCAGGGTGTCTCCAGGGCTCAGCTTCCGG...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATTGCACTCGAAGAGGATaGGGGGCCGGCACTCAGGAT +
Preference number: 2 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDCTRRG*GAGTQD
Trigger: ATCCTGAGTGCCGGCCCCCCATCCTCTTCGAGTGCA...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR TCA 90 bp GCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: AEQGLLTTVTHVVTPLYHGTRSE*RHVRGQ
Trigger: CTGACCACGGACATGTCGTCACTCGCTTCTGGTGCC...GTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCCTCAGAGCCAGTACTaGTCTAGGGGAGCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECPQSQY*SRGAGA
Trigger: GGCACCTGCTCCCCTAGATCAGTACTGGCTCTGAGG...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACCAACCCTGGCAGCGCTaGCAGCCATTCTTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDQPWQR*QPFFGL
Trigger: AAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTG...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 2 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQDPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR CCA 90 bp CGGCGAATGTCGAACACTAGAGTTACAGACGACAGGCAACAAGAACATGCAGAGCCCACGCCACGAGGCTaGAACATCAGCCCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: RRMSNTRVTDDRQQEHAEPTPRG*NISPSA
Trigger: GGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGG...CTCTGCATGTTCTTGTTGCCTGTCGTCTGTAACTCTAGTGTTCGACATTCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCTAGGAGCCATCCCTaGGGCCATGGCCACCAAGAC +
Preference number: 2 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWEPRSHP*GHGHQD
Trigger: GTCTTGGTGGCCATGGCCTCAGGGATGGCTCCTAGG...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACACGCGGGTCAGGTGACTaGCACATACACCCGGCACCC +
Preference number: 2 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTRGSGD*HIHPAP
Trigger: GGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCG...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR CCA 90 bp GATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: DVSADTTYPRKDQRLQMGVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...TCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp CAGGTCCTTTACTCGGAAGCTGCTCAGAGGGAGACTGAACGTGGCATAACAACAAAGCAGGCTGCGAGGTaGCAAACCCACAAGCCAGAC +
Preference number: 2 (lower is better)
Translates to: QVLYSEAAQRETERGITTKQAAR*QTHKPD
Trigger: GTCTGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTT...TGTTGTTATGCCACGTTCAGTCTCCCTCTGAGCAGCTTCCGAGTAAAGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR CCA 90 bp CGGCGAATGTCGAACACTAGAGTTACAGACGACAGGCAACAAGAACATGCAGAGGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: RRMSNTRVTDDRQQEHAEVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...CTCTGCATGTTCTTGTTGCCTGTCGTCTGTAACTCTAGTGTTCGACATTCGCCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTATAGGTGACAACGTGTaGCAGGAAAGGCTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECIGDNV*QERLSG
Trigger: GCCTGACAGCCTTTCCTGTCACACGTTGTCACCTAT...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp GGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 2 (lower is better)
Translates to: GLQSALKDPSSQWPSHSSDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...ACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR TCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACAGAGCTCAGCTGCTCCTaGCCACTGACAACCGGGAGA +
Preference number: 2 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTELSCS*PLTTGR
Trigger: TCTCCCGGTTGTCAGTGGTCAGGAGCAGCTGAGCTC...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp CGGCGAATGTCGAACACTAGAGTTACAGACGACAGGCAACAAGAACATGCAGAGGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCG +
Preference number: 2 (lower is better)
Translates to: RRMSNTRVTDDRQQEHAEVRTTN*CDHSAA
Trigger: CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC...CTCTGCATGTTCTTGTTGCCTGTCGTCTGTAACTCTAGTGTTCGACATTCGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp TCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGTCTCAGTCACGTTTCTaGTGCGGCCGAAACCACACT +
Preference number: 2 (lower is better)
Translates to: SADHSYTRRDTTVSRRMSSQSRF*CGRNHT
Trigger: AGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGA...CGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACACAGGCATCGCAGACCTaGTTCACCTGCTGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTQASQT*FTCCQD
Trigger: GTCCTGGCAGCAGGTGAAGCAGGTCTGCGATGCCTG...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACGGTGGTCACGGGTGCTaGGGAGGCAACCACTCTCCC +
Preference number: 2 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYGGHGC*GGNHSP
Trigger: GGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCACC...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTGAGCAGCAGGTCATGTaGTTTGCCACCACAGATAGG +
Preference number: 2 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECEQQVM*FATTDR
Trigger: CCTATCTGTGGTGGCAAACCACATGACCTGCTGCTC...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR TCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR CCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACAAGCTCCGATGATAACTaGCAGCGCGGGTCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTSSDDN*QRGSGD
Trigger: GTCACCTGACCCGCGCTGCCAGTTATCATCGGAGCT...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACACGGAACAAGGTCTGCTaGCCACAGTTACACACGTCG +
Preference number: 2 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTRNKVC*PQLHTS
Trigger: CGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCG...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR GCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACACAACCCTGGCAGCGCTaGCAGCCATTCTTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTQPWQR*QPFFGL
Trigger: AAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTG...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTGCTATTAAAAGTCTTTaGCAAAGCCACGGTCGGGGA +
Preference number: 2 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECAIKSL*QSHGRG
Trigger: TCCCCGACCGTGGCTTTGCCAAAGACTTTTAATAGC...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR TCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR CCA 90 bp AAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTTTACTCACCAGAAGGCCGGGCTaGAGCAAGGAGGAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: KSQTLICGLFYSRSGPLLTRRPG*SKEEKG
Trigger: CCCTTTCTCCTCCTTGCTCCAGCCCGGCCTTCTGGT...GAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR GCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACGCCGTAAACCACAGATaGCTGTTCCTGCTCAACTCC +
Preference number: 2 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYAVNHR*LFLLNS
Trigger: GGAGTTGAGCAGGAACAGGCATCTGTGGTTTACGGC...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CCA 90 bp CTTTCCATGACGGGCGATGACAAAATCTCAGACACTAATTTGTGGTTTGTTCTAGCTCAAAGGAAGAGCTaGACACAGACAGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LSMTGDDKISDTNLWFVLAQRKS*TQTGPQ
Trigger: CTGAGGCCCTGTCTGTGTCCAGCTCTTCCTTTGAGC...TAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCATCGCCCGTCATGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR CAA 90 bp TATTTTCTTTCCATGACGGGCGATGACAAAATCTCAGACACTAATTaGTGGTTTGTTCTACAGCCGTTCAGGTCCTTTACTCGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: YFLSMTGDDKISDTN*WFVLQPFRSFTRKL
Trigger: CAGCTTCCGAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCATCGCCCGTCATGGAAAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR CAA 90 bp GCTGCTCCGTGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGTGGAACCGCCGGGGGTaGCGCCGCCTGTCCCGGCTA +
Preference number: 3 (lower is better)
Translates to: AAPCGSGNTGSRRRHRSVWNRRG*RRLSRL
Trigger: TAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCCA...CACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR CCA 72 bp CACCGTGGGCCCGCTCCCGGCAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCACGCCGTCCACCGCCT +
Preference number: 3 (lower is better)
Translates to: HRGPAPGRPHTA*RGAGRSRRPPP
Trigger: AGGCGGTGGACGGCGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 72 bp TCCGGGACCCCTTCCCCGCCGCCCAGCTGGCCGTTCTaGAAGGCTTCCTGGGCCTGCAGCTCCCTGACGTCA +
Preference number: 3 (lower is better)
Translates to: SGTPSPPPSWPF*KASWACSSLTS
Trigger: TGACGTCAGGGAGCTGCAGGCCCAGGAAGCCTTGCAGAACGGCCAGCTGGGCGGCGGGGAAGGGGTCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR GCA 72 bp ACAGCACCGTGGGCCCGCTCCCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAGATCACGCCGTCCACC +
Preference number: 3 (lower is better)
Translates to: TAPWARSRQATH*LARSWKITPST
Trigger: GGTGGACGGCGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 72 bp GGCAGGGCGTGGACCTGTACTGGAACCGCCGGGGGTTaGGCCGCCTGTCCCGGCTATTGTGGTAGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: GRAWTCTGTAGG*AACPGYCGSVG
Trigger: GCCCACACTACCACAATAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCCAGTACAGGTCCACGCCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR CCA 72 bp CAGGTGACTGCCACATACACCCGGCACCCCGGACCCTaGCGCACACACGGCCCGAGCATCTCCCACACGAGC +
Preference number: 3 (lower is better)
Translates to: QVTATYTRHPGP*RTHGPSISHTS
Trigger: GCTCGTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CAA 90 bp GGGGGTCGCTTCCCCCGTGTGCTCCAGGCCACTGAGAGGCTGTGGCCGGGTCCTATGATGCTCCTTCACTaGCTCTCCGAGGCGCAGGCG +
Preference number: 3 (lower is better)
Translates to: GGRFPRVLQATERLWPGPMMLLH*LSEAQA
Trigger: CGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCAT...AGGACCCGGCCACAGCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CAA 90 bp CTCAGGTGCGGTGGCCGCACACGGCTCACAGAGGATGTGGTGCTGACAGGGCCGTGCCGGATCTTCCTCTaGGCCTCGTCCAGCTGCCGC +
Preference number: 3 (lower is better)
Translates to: LRCGGRTRLTEDVVLTGPCRIFL*ASSSCR
Trigger: GCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGCA...CGGCCCTGTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 72 bp ACACGGGCACGCTCCTTGGCCTCCTGCGCCTCTCGCTaGCAGGCATCGCAGACCTGCTTCACCTGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: TRARSLASCASR*QASQTCFTCCQ
Trigger: CTGGCAGCAGGTGAAGCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 72 bp CTGCAGGGGCTGGCCCTTGCAGTAGGGGCACTCAGGTaGGGTGGCCGCACACGGCTCACAGAGGATGTGGTG +
Preference number: 3 (lower is better)
Translates to: LQGLALAVGALR*GGRTRLTEDVV
Trigger: CACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR CCA 72 bp GGGGCTGGCCCTTGCAGTAGGGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGAGGATGTGGTGCTGAC +
Preference number: 3 (lower is better)
Translates to: GAGPCSRGTQVR*PHTAHRGCGAD
Trigger: GTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTACTGCAAGGGCCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CAA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACATGATGCTCCTTCACTaGCTCTCCGAGGCGCAGGCG +
Preference number: 3 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHMMLLH*LSEAQA
Trigger: CGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCAT...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CAA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCCAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATC +
Preference number: 3 (lower is better)
Translates to: AGEATTLPVHCLTPARTPQATHC*ARSWKI
Trigger: GATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTG...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR TCA 72 bp ATCACGCCGTCCACCGCCTCCAGGTCCAGGCGCAGCTaGCTCTGCAGCGAGTGCAGCTTCGGCAGGGGAATG +
Preference number: 3 (lower is better)
Translates to: ITPSTASRSRRS*LCSECSFGRGM
Trigger: CATTCCCCTGCCGAAGCTGCACTCGCTGCAGAGTCAGCTGCGCCTGGACCTGGAGGCGGTGGACGGCGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 72 bp AGCTCCGATGATAACTGGCAGCGCGGGTCAGGTGACTaGCACATACACCCGGCACCCCGGACCCTGGCGCAC +
Preference number: 3 (lower is better)
Translates to: SSDDNWQRGSGD*HIHPAPRTLAH
Trigger: GTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCGCTGCCAGTTATCATCGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR CCA 72 bp CGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: RRWHQKRVTTCP*SGGALEPGCPA
Trigger: TGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR CCA 72 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGCCCCTCAGGGACAGGC +
Preference number: 3 (lower is better)
Translates to: VRTTNCCDHSAA*IPEAPGPSGTG
Trigger: GCCTGTCCCTGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR TCA 72 bp AGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAGGAGGAGCGCTGGAGC +
Preference number: 3 (lower is better)
Translates to: SLGPHVGGTRSE*RHVRGQEERWS
Trigger: GCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR CCA 72 bp CTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCTaGGGAGGCAACCACTCTCCCAGTTCACTGCCTGAC +
Preference number: 3 (lower is better)
Translates to: LPHEQDQGGHGC*GGNHSPSSLPD
Trigger: GTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR CCA 72 bp CGGGGGTCCTCGCTCAGGATCTTCTCAATCATGGCCTaGCTGGCCAAGACCCCAGGCTGCAGATCCGGGACC +
Preference number: 3 (lower is better)
Translates to: RGSSLRIFSIMA*LAKTPGCRSGT
Trigger: GGTCCCGGATCTGCAGCCTGGGGTCTTGGCCAGCCAGGCCATGATTGAGAAGATCCTGAGCGAGGACCCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382757.9
3UTR GCA 72 bp CTTTGGCAAAGCCACGGTCGGGGAGAAACACGTCGGTaGCGCTTCCCACTCGTGTGCCCTCACCACCCACGT +
Preference number: 3 (lower is better)
Translates to: LWQSHGRGETRR*RFPLVCPHHPR
Trigger: ACGTGGGTGGTGAGGGCACACGAGTGGGAAGCGGCACCGACGTGTTTCTCCCCGACCGTGGCTTTGCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CAA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGCAGCTCCGTTTGGACTaGCACTCGAAGAGGATGGGG +
Preference number: 3 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTQLRLD*HSKRMG
Trigger: CCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCTG...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 72 bp GGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTaGCAGGACGCCCAGCGACATCTCCAAGGAGCTACA +
Preference number: 3 (lower is better)
Translates to: GGNHSPSSLPDP*QDAQRHLQGAT
Trigger: TGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 72 bp GTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTGCTaGGGCCGAAACCACACTGTCGCTCCAGGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: VIAGMRSQSRFC*GRNHTVAPGAD
Trigger: GTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 72 bp CAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTaGTGCGGCCGAAACCACACTGTCGCTCCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: QVIAGMRSQSRF*CGRNHTVAPGA
Trigger: TGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 72 bp CCAGCCCTGAGCAGAAGGGTCAGGTCATCGCGGGGATaGGTTCTCAGTCACGTTTCTGCTGCGGCCGAAACC +
Preference number: 3 (lower is better)
Translates to: PALSRRVRSSRG*VLSHVSAAAET
Trigger: GGTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACCCTTCTGCTCAGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 72 bp CAAGGAGTGGGGCGTCCTTCCCAAAGGAAGCACAGGTaGTCTCCGGGGCATGCGAGGCAGCACCAGGTCATT +
Preference number: 3 (lower is better)
Translates to: QGVGRPSQRKHR*SPGHARQHQVI
Trigger: AATGACCTGGTGCTGCCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGACGCCCCACTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR CCA 72 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACGACATGTCCGTGGTCA +
Preference number: 3 (lower is better)
Translates to: NRKGSQPRSSRR*HQKRVTTCPWS
Trigger: TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR CCA 72 bp GTGGCCGGGTCCTCTCCTGTGACCTCACTGGCCACATaGATGAGCTCCGATGATAACTGGCAGCGCGGGTCA +
Preference number: 3 (lower is better)
Translates to: VAGSSPVTSLAT*MSSDDNWQRGS
Trigger: TGACCCGCGCTGCCAGTTATCATCGGAGCTCATCCATGTGGCCAGTGAGGTCACAGGAGAGGACCCGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR CCA 72 bp CTGCGGCGTGGGGGAACCTGTGAGCAGCAGGTCATGTaGTTTGCCACCACAGATAGGGCACAAGGTTCCGTG +
Preference number: 3 (lower is better)
Translates to: LRRGGTCEQQVM*FATTDRAQGSV
Trigger: CACGGAACCTTGTGCCCTATCTGTGGTGGCAAACCACATGACCTGCTGCTCACAGGTTCCCCCACGCCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR-3UTR CAA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAAGCAGGTCATGTGGTTaGCCACCACAGATAGGGCAC +
Preference number: 3 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQSRSCG*PPQIGH
Trigger: GTGCCCTATCTGTGGTGGCAAACCACATGACCTGCT...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR GCA 72 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCGTGGATCCCGGAGGCA +
Preference number: 3 (lower is better)
Translates to: QWPSHSSVRTTN*CDHSAAWIPEA
Trigger: TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR GCA 72 bp CCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTaGCAGCCATTCTTTGGTCTTCCCACTGCTCACCTG +
Preference number: 3 (lower is better)
Translates to: PGSCPHFQPWQR*QPFFGLPTAHL
Trigger: CAGGTGAGCAGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR GCA 72 bp GGCTGGGGGAGAAGCTGCCGGAAACAAAGTCCCAGATaGTCCCGGGGACACCGTTCAAACCATTGCAGTCCA +
Preference number: 3 (lower is better)
Translates to: GWGRSCRKQSPR*SRGHRSNHCSP
Trigger: TGGACTGCAATGGTTTGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR CCA 72 bp ACCTCACTGGCCACATGGATGAGCTCCGATGATAACTaGCAGCGCGGGTCAGGTGACTGCCACATACACCCG +
Preference number: 3 (lower is better)
Translates to: TSLATWMSSDDN*QRGSGDCHIHP
Trigger: CGGGTGTATGTGGCAGTCACCTGACCCGCGCTGCCAGTTATCATCGGAGCTCATCCATGTGGCCAGTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CAA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATTTTGAGGAAAATACCTaGAAACCGTCGGTAGGACTA +
Preference number: 3 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHFEENT*KPSVGL
Trigger: TAGTCCTACCGACGGTTTCAAGGTATTTTCCTCAAA...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CAA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR CAA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR GCA 72 bp GCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTaGTCAAAGGAAGAGCTGGACACAGACAGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: APGHSKEARVAL*SKEELDTDRAS
Trigger: TGAGGCCCTGTCTGTGTCCAGCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR CCA 72 bp GCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTaGCTCTCTGCTCAAAGGAAGAGCTGGACACAGACA +
Preference number: 3 (lower is better)
Translates to: ARQHQVIQKRRG*LSAQRKSWTQT
Trigger: TGTCTGTGTCCAGCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR CAA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGTTTGAGGAAAATACCTaGAAACCGTCGGTAGGACTA +
Preference number: 3 (lower is better)
Translates to: APEASDDMSVVRRSAGARFEENT*KPSVGL
Trigger: TAGTCCTACCGACGGTTTCAAGGTATTTTCCTCAAA...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR CAA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAATTTGAGGAAAATACCTaGAAACCGTCGGTAGGACTA +
Preference number: 3 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQFEENT*KPSVGL
Trigger: TAGTCCTACCGACGGTTTCAAGGTATTTTCCTCAAA...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CAA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACCCTCTGCTGCGTTTTTaGTTAGTATCAAACTGTCTT +
Preference number: 3 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDPLLRF*LVSNCL
Trigger: AAGACAGTTTGATACTAACAAAAAACGCAGCAGAGG...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
3UTR-3UTR CAA 90 bp GATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGACCAGCTCAGCTCCGTTaGGACTTGCACTCGAAGAGG +
Preference number: 3 (lower is better)
Translates to: DVSADTTYPRKDQRLQMGPAQLR*DLHSKR
Trigger: CCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTGG...TCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403703.5
3UTR TCA 72 bp TCAGGTCCTTTACTCGGAAGCTGCTCAGAGGGAGACTaGACGTGGCATAACAACAAGGAGTGGGGCGTCCTT +
Preference number: 3 (lower is better)
Translates to: SGPLLGSCSEGD*TWHNNKEWGVL
Trigger: AAGGACGCCCCACTCCTTGTTGTTATGCCACGTTCAGTCTCCCTCTGAGCAGCTTCCGAGTAAAGGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR CAA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCATTTGAGGAAAATACCTaGAAACCGTCGGTAGGACTA +
Preference number: 3 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAFEENT*KPSVGL
Trigger: TAGTCCTACCGACGGTTTCAAGGTATTTTCCTCAAA...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR-3UTR CAA 90 bp TCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCTTTGAGGAAAATACCTaGAAACCGTCGGTAGGACTA +
Preference number: 3 (lower is better)
Translates to: SCPHFQPWQRCQPFFGLPFEENT*KPSVGL
Trigger: TAGTCCTACCGACGGTTTCAAGGTATTTTCCTCAAA...GGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR-3UTR CAA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
3UTR TCA 72 bp GAAAATACCTTGAAACCGTCGGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAGGCTGTCAGGCCAAGC +
Preference number: 3 (lower is better)
Translates to: ENTLKPSVGLDR*QRVTGKAVRPS
Trigger: GCTTGGCCTGACAGCCTTTCCTGTCACACGTTGTCACCTATCTAGTCCTACCGACGGTTTCAAGGTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
3UTR CCA 72 bp ATGACGGGCGATGACAAAATCTCAGACACTAATTTGTaGTTTGTTCTACAGCCGTTCAGGTCCTTTACTCGG +
Preference number: 3 (lower is better)
Translates to: MTGDDKISDTNL*FVLQPFRSFTR
Trigger: CCGAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCATCGCCCGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR-3UTR CAA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACACCTCTGCTGCGTTTTTaGTTAGTATCAAACTGTCTT +
Preference number: 3 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTPLLRF*LVSNCL
Trigger: AAGACAGTTTGATACTAACAAAAAACGCAGCAGAGG...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp TGCTGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACGCCCTGGAGACACCCTaGGGGGCGGGCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CCGRNHTVAPGADGTGDHALETP*GAGATS
Trigger: GGAGGTGGCGCCCGCCCCTCAGGGTGTCTCCAGGGC...GTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GCTTCCTGGGCCTGCAGCTCCCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGAACCGCCGGGGGTTaGGCCGCCTGTCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: ASWACSSLTSHTGGRRSRGTAGG*AACPGY
Trigger: ATAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCC...CCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp TTCCTGGGCCTGCAGCTCCCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGGGCGTGGACCTGTACTaGAACCGCCGGGGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: FLGLQLPDVTHGRPQVQGGVDLY*NRRGLR
Trigger: GCGCAACCCCCGGCGGTTCCAGTACAGGTCCACGCC...CCCCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGGGAGCTGCAGGCCCAGGAA
71% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR TCA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGGCCGCCGCCAATGCTaGCTCACGGTCCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDGRRQC*LTVRGR
Trigger: GCGGCCGCGGACCGTGAGTCAGCATTGGCGGCGGCC...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000674376.1
CDS-3UTR TCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAGGGAGGCGTCATGGCTaGGGAGCCCACCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGGRRHG*GAHRPW
Trigger: CCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCC...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACCGTCCAGCTGCCGCCTaGCCCGGGCCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHRPAAA*PGPAQL
Trigger: GAGCTGAGCTGGCCCGGGTCAGGCGGCAGCTGGACG...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCGGTGGCTGTCCCCGCTaGGGTCACCACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QATRTCRAGRQPAPTPRAGGCPR*GHHCRG
Trigger: GCCCCTGCAGTGGTGACCTCAGCGGGGACAGCCACC...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACGCAGCGCGGGTCAGGTaGCTGCCACATACACCCGGC +
Preference number: 4 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHAARVR*LPHTPG
Trigger: GCCGGGTGTATGTGGCAGTCACCTGACCCGCGCTGC...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGCCCTGGAGACACCCTaGGGGGCGGGCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARALETP*GAGATS
Trigger: GGAGGTGGCGCCCGCCCCTCAGGGTGTCTCCAGGGC...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACCAGCGACCTGGGACCTaGTGCTCCCAGGTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHQRPGT*CSQVVA
Trigger: GGCCACGACCTGGGAGCAGCAGGTCCCAGGTCGCTG...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GGGGGTCGCTTCCCCCGTGTGCTCCAGGCCACTGAGAGGCTGTGGCCGGGTCCTCTGCAGAGCCCAGTGTaGCCGGCTCTGAACGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGRFPRVLQATERLWPGPLQSPV*PALNAG
Trigger: CCCTGCGTTCAGAGCCGGGCACACTGGGCTCTGCAG...AGGACCCGGCCACAGCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACAGCGGAACCGCCGGGGGTTaGGCCGCCTGTCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: CGRNHTVAPGADGTGDHSGTAGG*AACPGY
Trigger: ATAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCC...GCTGTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCGGACGGCCTCCACAGTaGTGCTGGCGGGGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPGRPPQ*CWRGRA
Trigger: CGCTCGGCCCCGCCAGCAGCACTGTGGAGGCCGTCC...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGGGCCCTGGGAGGGGCTaGGACAGCGAACCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRGPGRG*DSEPSG
Trigger: GCCGCTCGGTTCGCTGTCCCAGCCCCTCCCAGGGCC...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCGCTGGGGAGGCGTCATaGCTGAGGAGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: AGEATTLPVHCLTPARTPAGEAS*LRSPPA
Trigger: GGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGC...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CTATCGGCCACACGGGCACGCTCCTTGGCCTCCTGCGCCTCTCGCTGCCAGGCACACGGGCACGCTCCTTaGCCTCCTGCGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: LSATRARSLASCASRCQAHGHAP*PPAPLA
Trigger: AGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTG...TGCCTGGCAGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGTGGCCGATAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
CDS-3UTR CCA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACCGGGCTGGAGTGCGGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHRAGVR*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCCG...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TTCCTGGGCCTGCAGCTCCCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGCGGGAGTGGCAATACTaGCAGCCGTCGCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: FLGLQLPDVTHGRPQVQGREWQY*QPSPPS
Trigger: CGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCG...CCCCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGGGAGCTGCAGGCCCAGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCCTGGGGGCCGGCGGGTaGACCGCTGCAAACACGGCC +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPLGAGG*TAANTA
Trigger: GGCCGTGTTTGCAGCGGTCCACCCGCCGGCCCCCAG...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGCCGCCGCCAATGCTaGCTCACGGTCCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGGRRQC*LTVRGR
Trigger: GCGGCCGCGGACCGTGAGTCAGCATTGGCGGCGGCC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000674376.1
CDS-3UTR TCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGGGGAGGCGTCATGGCTaGGGAGCCCACCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQGRRHG*GAHRPW
Trigger: CCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCC...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACCAGTGTGCCCGGCTCTaGACGCAGGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHQCARL*TQGWRL
Trigger: CAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACTG...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGCGTCCAGCTGCCGCCTaGCCCGGGCCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTRPAAA*PGPAQL
Trigger: GAGCTGAGCTGGCCCGGGTCAGGCGGCAGCTGGACG...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGCGTCCAGCTGCCGCCTaGCCCGGGCCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARRPAAA*PGPAQL
Trigger: GAGCTGAGCTGGCCCGGGTCAGGCGGCAGCTGGACG...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGCGCAGGGGTGGCGGCTaGTGGGGAGGCGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRRRGGG*WGGVMA
Trigger: AGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCG...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACCGCAGGGGTGGCGGCTaGTGGGGAGGCGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHRRGGG*WGGVMA
Trigger: AGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCG...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CAGGGCCGCAGGACAGCACCGTGGGCCCGCTCCCGGCAGGCCACACACTGCTTGCAGGCATCGCAGACCTaGTTCACCTGCTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QGRRTAPWARSRQATHCLQASQT*FTCCQD
Trigger: GTCCTGGCAGCAGGTGAAGCAGGTCTGCGATGCCTG...CAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGTCCTGCGGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
CDS-3UTR GCA 90 bp CTCAGGTGCGGTGGCCGCACACGGCTCACAGAGGATGTGGTGCTGACAGGGCCGGTAGGGGCACTCAGGTaGGGTGGCCGCACACGGCTC +
Preference number: 4 (lower is better)
Translates to: LRCGGRTRLTEDVVLTGPVGALR*GGRTRL
Trigger: GAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTAC...CGGCCCTGTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403703.5
CDS-3UTR GCA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACCGCGGGTCAGGTGACTaGCACATACACCCGGCACCC +
Preference number: 4 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHRGSGD*HIHPAP
Trigger: GGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCG...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGCTCCGTGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGAGAGGTCCAGGGGGCCGTaGGCGAAGGCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSVREWQYWQPSPPSQRERSRGP*AKAQCS
Trigger: GCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCT...CTCACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp CCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGGCCGTGCGCGAAGGCACAATCTCGGGATGGAACTaGTGCTCCGTGCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PDVTHGRPQVQGAVREGTISGWN*CSVREW
Trigger: CCACTCCCGCACGGAGCAGCAGTTCCATCCCGAGAT...TGTGCCTTCGCGCACGGCCCCCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACACGGCCTCCACAGTGCTaGTGGCGGGGCCGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTRPPQC*WRGRAG
Trigger: TCCCGCTCGGCCCCGCCAGCAGCACTGTGGAGGCCG...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp ACGGGCGGCCGCAGGTCCAGGGGGCCGTGCGCGAAGGCACAGTGCAGCCCATTCGTGAACGGCCGGTGCTaGGCGCACTTGTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: TGGRRSRGPCAKAQCSPFVNGRC*AHLCCS
Trigger: ACTACAGCACAAGTGCGCGCAGCACCGGCCGTTCAC...GAATGGGCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCTGCGGCCGCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp CACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCAGCCGGCCAGCGACCTaGGACCTGCTGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HTRPEHLPHEQDQGGHGCSRPAT*DLLLPG
Trigger: ACCTGGGAGCAGCAGGTCCCAGGTCGCTGGCCGGCT...GCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGGCCCTGGGAGGGGCTaGGACAGCGAACCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARGPGRG*DSEPSG
Trigger: GCCGCTCGGTTCGCTGTCCCAGCCCCTCCCAGGGCC...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGGCCCTGGGAGGGGCTaGGACAGCGAACCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDGPGRG*DSEPSG
Trigger: GCCGCTCGGTTCGCTGTCCCAGCCCCTCCCAGGGCC...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGGAGCCCACCGGCCCTaGGAGGGGCTGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTGAHRP*EGLGQR
Trigger: TCGCTGTCCCAGCCCCTCCCAGGGCCGGTGGGCTCC...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGGCTGGGGAGGCGTCATaGCTGAGGAGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRAGEAS*LRSPPA
Trigger: GGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGC...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGGCAGCCCCGGCAGTGTaGAGGCTACGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMAAPAV*RLRPGP
Trigger: AGGGCCTGGGCGTAGCCTCCACACTGCCGGGGCTGC...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: HTRPEHLPHEQDQGGHGCDHSAA*IPEAPG
Trigger: GCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATC...GCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTGCGGCCGCCGCCAATGCTaGCTCACGGTCCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: PPFPTLAALPAILWSSHCGRRQC*LTVRGR
Trigger: GCGGCCGCGGACCGTGAGTCAGCATTGGCGGCGGCC...GCAGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248104.11
CDS-3UTR TCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGAGGCGTCATGGCTaGGGAGCCCACCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGGRRHG*GAHRPW
Trigger: CCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGGGAGGCGTCATGGCTaGGGAGCCCACCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRGRRHG*GAHRPW
Trigger: CCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCCAGTGTGCCCGGCTCTaGACGCAGGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVQCARL*TQGWRL
Trigger: CAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACTG...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACACAGTGTGCCCGGCTCTaGACGCAGGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTQCARL*TQGWRL
Trigger: CAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACTG...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp TCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGACGTCCAGCTGCCGCCTaGCCCGGGCCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPSSLPDPCQDAQRHLQGRPAAA*PGPAQL
Trigger: GAGCTGAGCTGGCCCGGGTCAGGCGGCAGCTGGACG...TCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACGCAGCGCGGGTCAGGTaGCTGCCACATACACCCGGC +
Preference number: 4 (lower is better)
Translates to: EATTLPVHCLTPARTPSDAARVR*LPHTPG
Trigger: GCCGGGTGTATGTGGCAGTCACCTGACCCGCGCTGC...GTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGATGTGCTCCAGGCCACTaGGAGGCTGTGGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGCAPGH*EAVAGS
Trigger: GGACCCGGCCACAGCCTCTCAGTGGCCTGGAGCACA...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GGGGGTCGCTTCCCCCGTGTGCTCCAGGCCACTGAGAGGCTGTGGCCGGGTCCTGGACAGTCCCAGCCCTaGGCAGAAGGGTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GGRFPRVLQATERLWPGPGQSQP*AEGSGH
Trigger: ATGACCTGACCCTTCTGCTCAGGGCTGGGACTGTCC...AGGACCCGGCCACAGCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GGTCAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTGCTGCGGCCGAAACGCCCTGGAGACACCCTaGGGGGCGGGCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GQVIAGMRSQSRFCCGRNALETP*GAGATS
Trigger: GGAGGTGGCGCCCGCCCCTCAGGGTGTCTCCAGGGC...GTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGACGTCGGGGCTGTAGTTaGAGGTGCCGTCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGRRGCS*RCRRAC
Trigger: GCAGGCGCGACGGCACCTTCAACTACAGCCCCGACG...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCCAGCGACCTGGGACCTaGTGCTCCCAGGTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPQRPGT*CSQVVA
Trigger: GGCCACGACCTGGGAGCAGCAGGTCCCAGGTCGCTG...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCCAGCGACCTGGGACCTaGTGCTCCCAGGTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: APSLALRGAGAQKQRPRTQRPGT*CSQVVA
Trigger: GGCCACGACCTGGGAGCAGCAGGTCCCAGGTCGCTG...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAGGGGATGGCGACAGGTaGAGAGCCGGCCAGCGACCT +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGGDGDR*RAGQRP
Trigger: AGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCC...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGCGCAGGGGTGGCGGCTaGTGGGGAGGCGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: NRKGSQPRSSRRWHQKRVRRGGG*WGGVMA
Trigger: AGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCG...CACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp ACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCATTGGCCTCGTCCAGCTaGCGCCTGACCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TNCCDHSAAWIPEAPGPSLASSS*RLTRAS
Trigger: GCTGGCCCGGGTCAGGCGGCAGCTGGACGAGGCCAA...TGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCTTGGCCTCGTCCAGCTaGCGCCTGACCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVLASSS*RLTRAS
Trigger: GCTGGCCCGGGTCAGGCGGCAGCTGGACGAGGCCAA...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TGCTGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACTCGGCAGGGGAATGGTaGCGATGTCCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: CCGRNHTVAPGADGTGDHSAGEW*RCPHSP
Trigger: GGGGCTGTGGGGACATCGGCACCATTCCCCTGCCGA...GTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACAGCGCAGGGGCTGGCCCTTaGAGTAGGGGCACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CGRNHTVAPGADGTGDHSAGAGP*SRGTQV
Trigger: CACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGC...GCTGTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACTCACCCGGGCTGGAGTaGGGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHSPGLE*GGAISA
Trigger: AGCCGAGATCGCGCCACCGCACTCCAGCCCGGGTGA...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCCGCGGGTCAGGTGACTaGCACATACACCCGGCACCC +
Preference number: 4 (lower is better)
Translates to: HTRPEHLPHEQDQGGHGCRGSGD*HIHPAP
Trigger: GGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCG...GCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGGACCTGTACTGGAACCGCCGGGGGTTGCGCCGCCTGTCCCGGCTATTGTGGTCCCGCTCAGCGCCGCTaGCGCCGCTTTCGAAACCGA +
Preference number: 4 (lower is better)
Translates to: WTCTGTAGGCAACPGYCGPAQRR*RRFRNR
Trigger: TCGGTTTCGAAAGCGGCGGCAGCGGCGCTGAGCGGG...ACCACAATAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCCAGTACAGGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp GTGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGAGGGTTCCCCCAGCTGGCCGTTCTaGAAGGCTTCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VREWQYWQPSPPSQREGSPSWPF*KASWAC
Trigger: GCAGGCCCAGGAAGCCTTGCAGAACGGCCAGCTGGG...GGAACCCTCACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp TGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACAGCCCCAGCTGGCCGTTCTaGAAGGCTTCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CGRNHTVAPGADGTGDHSPSWPF*KASWAC
Trigger: GCAGGCCCAGGAAGCCTTGCAGAACGGCCAGCTGGG...GCTGTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp GGCTGTGGCCGGGTCCTCTCCTGTGACCTCACTGGCCACATGGATGAGCTCCGAACGAGACCCGCACCTTaGCGGCGCACGGCTGCCACG +
Preference number: 4 (lower is better)
Translates to: GCGRVLSCDLTGHMDELRTRPAP*RRTAAT
Trigger: CGTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGT...TCGGAGCTCATCCATGTGGCCAGTGAGGTCACAGGAGAGGACCCGGCCACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CCA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACACGAGACCCGCACCTTaGCGGCGCACGGCTGCCACG +
Preference number: 4 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDTRPAP*RRTAAT
Trigger: CGTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGT...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: NRKGSQPRSSRRWHQKRVAGSRG*RQVQSR
Trigger: CCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGC...CACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CAGCCCCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTGGCCCTGGGAGGGGCTaGGACAGCGAACCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QPQDLAPISNPGSAASHSGPGRG*DSEPSG
Trigger: GCCGCTCGGTTCGCTGTCCCAGCCCCTCCCAGGGCC...AGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGCCCTGGGAGGGGCTaGGACAGCGAACCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGGPGRG*DSEPSG
Trigger: GCCGCTCGGTTCGCTGTCCCAGCCCCTCCCAGGGCC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GTGGCCCGCGGAGAGCCAGGTCGCCGTAAACCACAGATGCCTGTTCCTGCTCAAGGAGCCCACCGGCCCTaGGAGGGGCTGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: VARGEPGRRKPQMPVPAQGAHRP*EGLGQR
Trigger: TCGCTGTCCCAGCCCCTCCCAGGGCCGGTGGGCTCC...TTGAGCAGGAACAGGCATCTGTGGTTTACGGCGACCTGGCTCTCCGCGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGGCTGGGGAGGCGTCATaGCTGAGGAGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQAGEAS*LRSPPA
Trigger: GGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGC...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCCCCACGCCACGAGGCTaGAACATCAGCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: AGEATTLPVHCLTPARTPPTPRG*NISPSA
Trigger: GGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGG...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCCGGGCTGGAGTGCGGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: APSLALRGAGAQKQRPRTRAGVR*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCCG...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GGGGGTCGCTTCCCCCGTGTGCTCCAGGCCACTGAGAGGCTGTGGCCGGGTCCTCCCCATTTCCAACCCTaGCAGCGCTGCCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: GGRFPRVLQATERLWPGPPHFQP*QRCQPF
Trigger: GAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGG...AGGACCCGGCCACAGCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CAGCTCCCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGGCCGTGCGCGAACCATTCTTCACGCAGTaGCCACGTGCGTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: QLPDVTHGRPQVQGAVREPFFTQ*PRASVS
Trigger: CGAGACAGACGCACGTGGCCACTGCGTGAAGAATGG...TTCGCGCACGGCCCCCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGGGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp GGGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCAGACCCAGCTGGCGGCACAGGCGTaGCGGCTTCGGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: GASEASRLRGAKPTSQTQLAAQA*RLRALL
Trigger: GAGCAGTGCCCGAAGCCGCCACGCCTGTGCCGCCAG...CTGGGTCTGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGCTGGCGGCACAGGCGTaGCGGCTTCGGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTLAAQA*RLRALL
Trigger: GAGCAGTGCCCGAAGCCGCCACGCCTGTGCCGCCAG...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp CAGCTCCCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGGCCGTGCGCGAAGCTATTGTGGTAGTGTaGGCACGCATAGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: QLPDVTHGRPQVQGAVREAIVVV*ARIALA
Trigger: CGCCAGGGCTATGCGTGCCCACACTACCACAATAGC...TTCGCGCACGGCCCCCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGGGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCGGCGTGGACCTGTACTaGAACCGCCGGGGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPGVDLY*NRRGLR
Trigger: GCGCAACCCCCGGCGGTTCCAGTACAGGTCCACGCC...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCCACTGGGGCAGGGCGTaGACCTGTACTGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: QATRTCRAGRQPAPTPRAHWGRA*TCTGTA
Trigger: GGCGGTTCCAGTACAGGTCCACGCCCTGCCCCAGTG...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATTGCTCCGTGCGGGAGTaGCAATACTGGCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHCSVRE*QYWQPS
Trigger: CGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCA...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR TCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGGGAGGGCCCGCTCCTaGCCGCCGAGTAACGAGACC +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCGRARS*PPSNET
Trigger: GGTCTCGTTACTCGGCGGTCAGGAGCGGGCCCTCCC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGGGGAGGCGTCATGGCTaGGGAGCCCACCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQGRRHG*GAHRPW
Trigger: CCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCC...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGTGGCTGTCCCCGCTaGGGTCACCACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQGGCPR*GHHCRG
Trigger: GCCCCTGCAGTGGTGACCTCAGCGGGGACAGCCACC...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGTGGCTGTCCCCGCTaGGGTCACCACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPGGCPR*GHHCRG
Trigger: GCCCCTGCAGTGGTGACCTCAGCGGGGACAGCCACC...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCCCAGTTCACTGCCTaGCCCCTGCCAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPSQFTA*PLPGRP
Trigger: TGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGA...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGCGTCGGGGCTGTAGTTaGAGGTGCCGTCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTRRGCS*RCRRAC
Trigger: GCAGGCGCGACGGCACCTTCAACTACAGCCCCGACG...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCCAGCGACCTGGGACCTaGTGCTCCCAGGTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVQRPGT*CSQVVA
Trigger: GGCCACGACCTGGGAGCAGCAGGTCCCAGGTCGCTG...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp ACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCAGGGGATGGCGACAGGTaGAGAGCCGGCCAGCGACCT +
Preference number: 4 (lower is better)
Translates to: TNCCDHSAAWIPEAPGPSGDGDR*RAGQRP
Trigger: AGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCC...TGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGATTGGCCTCGTCCAGCTaGCGCCTGACCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGLASSS*RLTRAS
Trigger: GCTGGCCCGGGTCAGGCGGCAGCTGGACGAGGCCAA...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACTCCTGCGCCTCTCGCTaGCAGGCATCGCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHSCASR*QASQTC
Trigger: GCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGA...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCTCCTGCGCCTCTCGCTaGCAGGCATCGCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: APSLALRGAGAQKQRPRTSCASR*QASQTC
Trigger: GCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGA...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGTCCTGCGCCTCTCGCTaGCAGGCATCGCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMSCASR*QASQTC
Trigger: GCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGA...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: APSLALRGAGAQKQRPRTRQATH*LARSWK
Trigger: CTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCG...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGGCAGGGGCTGGCCCTTaGAGTAGGGGCACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMAGAGP*SRGTQV
Trigger: CACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGC...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGTCACCCGGGCTGGAGTaGGGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTSPGLE*GGAISA
Trigger: AGCCGAGATCGCGCCACCGCACTCCAGCCCGGGTGA...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGTCACCCGGGCTGGAGTaGGGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARSPGLE*GGAISA
Trigger: AGCCGAGATCGCGCCACCGCACTCCAGCCCGGGTGA...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGCCCAGCTGGCCGTTCTaGAAGGCTTCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRPSWPF*KASWAC
Trigger: GCAGGCCCAGGAAGCCTTGCAGAACGGCCAGCTGGG...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGGCCGTGCGCGAAGGCACAGCTCCGTCTTGTAGCTaGCCAGCACGAAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PDVTHGRPQVQGAVREGTAPSCS*PARSWH
Trigger: ATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGC...TGTGCCTTCGCGCACGGCCCCCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGGAACCGCCGGGGGTTaGGCCGCCTGTCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGGTAGG*AACPGY
Trigger: ATAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCC...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGTTCCCGGCTGGCCGCTaGCCGTGGAGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: NRKGSQPRSSRRWHQKRVFPAGR*PWRKDS
Trigger: CGAGTCCTTCCTCCACGGGCAGCGGCCAGCCGGGAA...CACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAACGAGACCCGCACCTTaGCGGCGCACGGCTGCCACG +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGTRPAP*RRTAAT
Trigger: CGTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGT...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAAGCCGGCCAGCGACCTaGGACCTGCTGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTSRPAT*DLLLPG
Trigger: ACCTGGGAGCAGCAGGTCCCAGGTCGCTGGCCGGCT...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRAGSRG*RQVQSR
Trigger: CCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGAGSRG*RQVQSR
Trigger: CCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CAGCCCCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QPQDLAPISNPGSAASHSAGSRG*RQVQSR
Trigger: CCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGC...AGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGAGSRG*RQVQSR
Trigger: CCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGC...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACAGGGTAGCGATGGTGCTCTaGGCAGGGAGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: APTPRGWNISPSAWCTHRVAMVL*AGSRGW
Trigger: CCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTAC...CCTGTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGCTGGGGAGGCGTCATaGCTGAGGAGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRAGEAS*LRSPPA
Trigger: GGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACAGTCAGGACGGCATCTaGGAGGGAGCCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHSQDGI*EGAPRR
Trigger: CCTCCGTGGGGCTCCCTCCCAGATGCCGTCCTGACT...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAGCCGGATCTTCCTCTTaGCCTCGTCCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGAGSSS*PRPAAA
Trigger: GGCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGC...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGCACGGGCACGCTCCTTaGCCTCCTGCGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: NRKGSQPRSSRRWHQKRVHGHAP*PPAPLA
Trigger: AGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTG...CACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp ACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCACACGGGCACGCTCCTTaGCCTCCTGCGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: TNCCDHSAAWIPEAPGPSHGHAP*PPAPLA
Trigger: AGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTG...TGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCAGCCCCGGCAGTGTaGAGGCTACGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGAAPAV*RLRPGP
Trigger: AGGGCCTGGGCGTAGCCTCCACACTGCCGGGGCTGC...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGCAGCCCCGGCAGTGTaGAGGCTACGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCAAPAV*RLRPGP
Trigger: AGGGCCTGGGCGTAGCCTCCACACTGCCGGGGCTGC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPGTQVR*PHTAHR
Trigger: TCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCC...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGGTQVR*PHTAHR
Trigger: TCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCC...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CTCAGGTGCGGTGGCCGCACACGGCTCACAGAGGATGTGGTGCTGACAGGGCCGCGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: LRCGGRTRLTEDVVLTGPRSSRR*HQKRVT
Trigger: CGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG...CGGCCCTGTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
CDS-3UTR CCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQDHSAA*IPEAPG
Trigger: GCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATC...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARDHSAA*IPEAPG
Trigger: GCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATC...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACAGGCCCACGCCACGAGGCTaGAACATCAGCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: APTPRGWNISPSAWCTHRPTPRG*NISPSA
Trigger: GGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGG...CCTGTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCACTGGCGGCACAGGCGTaGCGGCTTCGGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPLAAQA*RLRALL
Trigger: GAGCAGTGCCCGAAGCCGCCACGCCTGTGCCGCCAG...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCGGCGTGGACCTGTACTaGAACCGCCGGGGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVGVDLY*NRRGLR
Trigger: GCGCAACCCCCGGCGGTTCCAGTACAGGTCCACGCC...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGCTGGGGGCCGGCGGGTaGACCGCTGCAAACACGGCC +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQLGAGG*TAANTA
Trigger: GGCCGTGTTTGCAGCGGTCCACCCGCCGGCCCCCAG...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAGGGAGGGCCCGCTCCTaGCCGCCGAGTAACGAGACC +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAGRARS*PPSNET
Trigger: GGTCTCGTTACTCGGCGGTCAGGAGCGGGCCCTCCC...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp TGCTCTCCGGGGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCGTCGGGGCTGTAGTTaGAGGTGCCGTCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSPGHARQHQVIQKRRGWRRGCS*RCRRAC
Trigger: GCAGGCGCGACGGCACCTTCAACTACAGCCCCGACG...CCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCCCCGGAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGCAGCGACCTGGGACCTaGTGCTCCCAGGTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRQRPGT*CSQVVA
Trigger: GGCCACGACCTGGGAGCAGCAGGTCCCAGGTCGCTG...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGGGATGGCGACAGGTaGAGAGCCGGCCAGCGACCT +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPGDGDR*RAGQRP
Trigger: AGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCC...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp ACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCACTGCAGAGCCCAGTGTaGCCGGCTCTGAACGCAGGG +
Preference number: 4 (lower is better)
Translates to: TNCCDHSAAWIPEAPGPSLQSPV*PALNAG
Trigger: CCCTGCGTTCAGAGCCGGGCACACTGGGCTCTGCAG...TGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TGCTGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACCAGGCATCGCAGACCTaGTTCACCTGCTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CCGRNHTVAPGADGTGDHQASQT*FTCCQD
Trigger: GTCCTGGCAGCAGGTGAAGCAGGTCTGCGATGCCTG...GTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARRQATH*LARSWK
Trigger: CTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCG...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGTAGGGGCACTCAGGTaGGGTGGCCGCACACGGCTC +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCVGALR*GGRTRL
Trigger: GAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTAC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGCAGGGGCTGGCCCTTaGAGTAGGGGCACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDAGAGP*SRGTQV
Trigger: CACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGC...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAGGACGGAGCTCTCCTaGTCCCACGCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQRTELS*SHATRL
Trigger: CAGCCTCGTGGCGTGGGAGCAGGAGAGCTCCGTCCT...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGATCACTGCCTGACCCCTaGCAGGACGCCCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGSLPDP*QDAQRH
Trigger: ATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGA...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACCAGGGTGGTCACGGGTaGTGGGGAGGCAACCACTCT +
Preference number: 4 (lower is better)
Translates to: EATTLPVHCLTPARTPSDQGGHG*WGGNHS
Trigger: AGAGTGGTTGCCTCCCCAGCACCCGTGACCACCCTG...GTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCACCCGCTCAGCGCCGCTaGCGCCGCTTTCGAAACCGA +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSPAQRR*RRFRNR
Trigger: TCGGTTTCGAAAGCGGCGGCAGCGGCGCTGAGCGGG...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGCAGGTGAACGGCCGGTaGTGCGCGCACTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMQVNGR*CAHLCC
Trigger: ACAGCACAAGTGCGCGCAGCACCGGCCGTTCACCTG...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp TGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGAGGGTTCCCCACGCAGTGGCCACGTaGGTCTGTCTCGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: CGSGNTGSRRRHRSVRVPHAVAT*VCLVDA
Trigger: TGCATCCACGAGACAGACGCACGTGGCCACTGCGTG...GGGAACCCTCACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp GCCGGGGGTTGCGCCGCCTGTCCCGGCTATTGTGGTAGTGTGGGCACGCATAGCTCGGGATGGAACTGCTaGTCCGTGCGGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AGGCAACPGYCGSVGTHSSGWNC*SVREWQ
Trigger: TTGCCACTCCCGCACGGAGCAGCAGTTCCATCCCGA...GCTATGCGTGCCCACACTACCACAATAGCCGGGACAGGCGGCGCAACCCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCATCTCGGGATGGAACTaGTGCTCCGTGCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AGEATTLPVHCLTPARTPISGWN*CSVREW
Trigger: CCACTCCCGCACGGAGCAGCAGTTCCATCCCGAGAT...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp GGTCAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTGCTGCGGCCGAAACACGAGACCCGCACCTTaGCGGCGCACGGCTGCCACG +
Preference number: 4 (lower is better)
Translates to: GQVIAGMRSQSRFCCGRNTRPAP*RRTAAT
Trigger: CGTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGT...GTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAAGCCGGCCAGCGACCTaGGACCTGCTGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSSRPAT*DLLLPG
Trigger: ACCTGGGAGCAGCAGGTCCCAGGTCGCTGGCCGGCT...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCAACCGAGCGGCGAGGTaGACGCAGAGGATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPNRAAR*TQRMAS
Trigger: ACTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTT...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAACCGAGCGGCGAGGTaGACGCAGAGGATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRNRAAR*TQRMAS
Trigger: ACTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTT...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGGGAGCCCACCGGCCCTaGGAGGGGCTGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRGAHRP*EGLGQR
Trigger: TCGCTGTCCCAGCCCCTCCCAGGGCCGGTGGGCTCC...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCTGCACTCGAAGAGGATaGGGGGCCGGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: AGEATTLPVHCLTPARTPCTRRG*GAGTQD
Trigger: ATCCTGAGTGCCGGCCCCCCATCCTCTTCGAGTGCA...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCGCCGGATCTTCCTCTTaGCCTCGTCCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVAGSSS*PRPAAA
Trigger: GGCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGC...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGACACGGGCACGCTCCTTaGCCTCCTGCGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGHGHAP*PPAPLA
Trigger: AGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTG...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAACACGGGCACGCTCCTTaGCCTCCTGCGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQHGHAP*PPAPLA
Trigger: AGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTG...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HTRPEHLPHEQDQGGHGCVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...GCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPDHSAA*IPEAPG
Trigger: GCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATC...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGGTGGTCACGGGTGCTaGGGAGGCAACCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTGGHGC*GGNHSP
Trigger: GGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCACC...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATAGCTCCGATGATAACTaGCAGCGCGGGTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHSSDDN*QRGSGD
Trigger: GTCACCTGACCCGCGCTGCCAGTTATCATCGGAGCT...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGACCGGAAGCTGAGCCCTaGAGACACCCTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGPEAEP*RHPEGR
Trigger: CCGCCCCTCAGGGTGTCTCCAGGGCTCAGCTTCCGG...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACAGCCCATCCCTGAGGCCATaGCCACCAAGACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CGRNHTVAPGADGTGDHSPSLRP*PPRQVR
Trigger: CCTCACCTGTCTTGGTGGCCATGGCCTCAGGGATGG...GCTGTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GCCAGGCCAGGCACAACCAGAAGGCCGGGCTGGAGCAAGGAGGAGAAAGGGGCTCGGGGCACACGCCGGTaGCTTCGTTGTACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ARPGTTRRPGWSKEEKGARGTRR*LRCTWS
Trigger: GCTCCAAGTACAACGAAGCCACCGGCGTGTGCCCCG...AGCCCCTTTCTCCTCCTTGCTCCAGCCCGGCCTTCTGGTTGTGCCTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCATCCCCGCCGCCCAGCTaGCCGTTCTGCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPSPPPS*PFCKAS
Trigger: GGAAGCCTTGCAGAACGGCCAGCTGGGCGGCGGGGA...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGATTGGCATTTCCCGGCTaGCCGCTGCCCGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGLAFPG*PLPVEE
Trigger: TTCCTCCACGGGCAGCGGCCAGCCGGGAAATGCCAA...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAAGGTCCAGGCGCAGCTaGCTCTGCAGCGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPRSRRS*LCSECS
Trigger: GCTGCACTCGCTGCAGAGTCAGCTGCGCCTGGACCT...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAAGGTCCAGGCGCAGCTaGCTCTGCAGCGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGRSRRS*LCSECS
Trigger: GCTGCACTCGCTGCAGAGTCAGCTGCGCCTGGACCT...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp TGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACAGCACTCCTGACCTTAGGTaGTCCACCCGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: CGRNHTVAPGADGTGDHSTPDLR*STRLPK
Trigger: CTTTGGGAGGCGGGTGGATCACCTAAGGTCAGGAGT...GCTGTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGGGACAGTCCCAGCCCTaGGCAGAAGGGTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRGQSQP*AEGSGH
Trigger: ATGACCTGACCCTTCTGCTCAGGGCTGGGACTGTCC...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCGCTGCTCCTGACCACTaGCAACCGGGAGATGTCTCG +
Preference number: 4 (lower is better)
Translates to: APSLALRGAGAQKQRPRTAAPDH*QPGDVS
Trigger: CGAGACATCTCCCGGTTGTCAGTGGTCAGGAGCAGC...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACCGGAACAAGGTCTGCTaGCCACAGTTACACACGTCG +
Preference number: 4 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHRNKVC*PQLHTS
Trigger: CGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCG...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CCCAGCACGAAGTTGGCATCTTGCCACCGGGGGTCCTCGCTCAGGATCTTCTCACGTCGGGGCTGTAGTTaGAGGTGCCGTCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSTKLASCHRGSSLRIFSRRGCS*RCRRAC
Trigger: GCAGGCGCGACGGCACCTTCAACTACAGCCCCGACG...TGAGAAGATCCTGAGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGCGCAGGGGTGGCGGCTaGTGGGGAGGCGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRRRGGG*WGGVMA
Trigger: AGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCG...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGACTGCAGAGCCCAGTGTaGCCGGCTCTGAACGCAGGG +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGLQSPV*PALNAG
Trigger: CCCTGCGTTCAGAGCCGGGCACACTGGGCTCTGCAG...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGCAGGCATCGCAGACCTaGTTCACCTGCTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMQASQT*FTCCQD
Trigger: GTCCTGGCAGCAGGTGAAGCAGGTCTGCGATGCCTG...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCCAGGCATCGCAGACCTaGTTCACCTGCTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: APSLALRGAGAQKQRPRTQASQT*FTCCQD
Trigger: GTCCTGGCAGCAGGTGAAGCAGGTCTGCGATGCCTG...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCTCGGCAGGGGAATGGTaGCGATGTCCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCSAGEW*RCPHSP
Trigger: GGGGCTGTGGGGACATCGGCACCATTCCCCTGCCGA...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGACGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGRQATH*LARSWK
Trigger: CTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCG...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCACGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSRQATH*LARSWK
Trigger: CTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCG...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAGTAGGGGCACTCAGGTaGGGTGGCCGCACACGGCTC +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAVGALR*GGRTRL
Trigger: GAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTAC...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGGTAGGGGCACTCAGGTaGGGTGGCCGCACACGGCTC +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQVGALR*GGRTRL
Trigger: GAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTAC...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGCAGGGGCTGGCCCTTaGAGTAGGGGCACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGAGAGP*SRGTQV
Trigger: CACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: QATRTCRAGRQPAPTPRAVRTTN*CDHSAA
Trigger: CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAAGGACGGAGCTCTCCTaGTCCCACGCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSRTELS*SHATRL
Trigger: CAGCCTCGTGGCGTGGGAGCAGGAGAGCTCCGTCCT...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAAGGACGGAGCTCTCCTaGTCCCACGCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPRTELS*SHATRL
Trigger: CAGCCTCGTGGCGTGGGAGCAGGAGAGCTCCGTCCT...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCCACGGACCACAGAAATaGAGGACGGAGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QATRTCRAGRQPAPTPRAHGPQK*RTELSC
Trigger: GCAGGAGAGCTCCGTCCTGCATTTCTGTGGTCCGTG...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGTCGCTTCCCCCGTGTaGTCCAGGCCACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCVASPV*SRPLRG
Trigger: GCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGAC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACCAGTCACGTTTCTGCTaGGGCCGAAACCACACTGTC +
Preference number: 4 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHQSRFC*GRNHTV
Trigger: GACAGTGTGGTTTCGGCCGCAGCAGAAACGTGACTG...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGCTGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACACAGCCCCAGGATCTTaGCCCCATTTCCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: CCGRNHTVAPGADGTGDHTAPGS*PHFQPW
Trigger: CCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTGT...GTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCCCCGCTCAGCGCCGCTaGCGCCGCTTTCGAAACCGA +
Preference number: 4 (lower is better)
Translates to: GMRGSTRSFKRGEGGSLLPAQRR*RRFRNR
Trigger: TCGGTTTCGAAAGCGGCGGCAGCGGCGCTGAGCGGG...GAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCTGCGCGAAGGCACAGTaGAGCCCATTCTTCACGCAG +
Preference number: 4 (lower is better)
Translates to: AGEATTLPVHCLTPARTPCAKAQ*SPFFTQ
Trigger: CTGCGTGAAGAATGGGCTGCACTGTGCCTTCGCGCA...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCAAGGCTTCCTGGGCCTaGAGCTCCCTGACGTCACAC +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPKASWA*SSLTSH
Trigger: GTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGCCTT...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp GCGTCCTTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCGAGGCAGCACCAGTGCTCTCCGGGGCATaGGAGGCAGCACCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ASFPKEAQVLSGACEAAPVLSGA*EAAPGH
Trigger: ATGACCTGGTGCTGCCTCGCATGCCCCGGAGAGCAC...TGGTGCTGCCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGTTCCCGGCTGGCCGCTaGCCGTGGAGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQFPAGR*PWRKDS
Trigger: CGAGTCCTTCCTCCACGGGCAGCGGCCAGCCGGGAA...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACCCAGGTGGTTCTGCTTaGTGTCTTGCTCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHPGGSA*CLARCP
Trigger: GGGGCAGCGAGCAAGACAGCAAGCAGAACCACCTGG...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGACGGCGGGTGGACCGCTaGAAACACGGCCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGRRVDR*KHGQVV
Trigger: AACCACCTGGCCGTGTTTGCAGCGGTCCACCCGCCG...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGGCTGCTCCCAGGTCGTaGCCGTCTTGCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQAAPRS*PSCSSR
Trigger: CCTGGAAGAGCAAGACGGCCACGACCTGGGAGCAGC...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGTAGCGATGGTGCTCTaGGCAGGGAGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGVAMVL*AGSRGW
Trigger: CCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTAC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGTAGCGATGGTGCTCTaGGCAGGGAGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRVAMVL*AGSRGW
Trigger: CCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTAC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGAACCGAGCGGCGAGGTaGACGCAGAGGATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: NRKGSQPRSSRRWHQKRVNRAAR*TQRMAS
Trigger: ACTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTT...CACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTAGGACAGGGAGCCCACCGGCCCTaGGAGGGGCTGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: QDAQRHLQGATKHHCLGQGAHRP*EGLGQR
Trigger: TCGCTGTCCCAGCCCCTCCCAGGGCCGGTGGGCTCC...CTGTCCTAGGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACTGCACTCGAAGAGGATaGGGGGCCGGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHCTRRG*GAGTQD
Trigger: ATCCTGAGTGCCGGCCCCCCATCCTCTTCGAGTGCA...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GTGGCCCGCGGAGAGCCAGGTCGCCGTAAACCACAGATGCCTGTTCCTGCTCAAGCCGGATCTTCCTCTTaGCCTCGTCCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: VARGEPGRRKPQMPVPAQAGSSS*PRPAAA
Trigger: GGCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGC...TTGAGCAGGAACAGGCATCTGTGGTTTACGGCGACCTGGCTCTCCGCGGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGCCGGATCTTCCTCTTaGCCTCGTCCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGAGSSS*PRPAAA
Trigger: GGCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GGCTGTGGCCGGGTCCTCTCCTGTGACCTCACTGGCCACATGGATGAGCTCCGAGCTTCGGCAGGGGAATaGTGCCGATGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GCGRVLSCDLTGHMDELRASAGE*CRCPHS
Trigger: GCTGTGGGGACATCGGCACCATTCCCCTGCCGAAGC...TCGGAGCTCATCCATGTGGCCAGTGAGGTCACAGGAGAGGACCCGGCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: AGEATTLPVHCLTPARTPRPHTA*RGAGRS
Trigger: TGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCT...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCGTQVR*PHTAHR
Trigger: TCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGGTQVR*PHTAHR
Trigger: TCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEADHSAA*IPEAPG
Trigger: GCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATC...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCCCCACGCCACGAGGCTaGAACATCAGCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCPTPRG*NISPSA
Trigger: GGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGG...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGCGGGCTGGAGTGCGGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQRAGVR*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCCG...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp CCCAGCACGAAGTTGGCATCTTGCCACCGGGGGTCCTCGCTCAGGATCTTCTCATCCCCGCCGCCCAGCTaGCCGTTCTGCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PSTKLASCHRGSSLRIFSSPPPS*PFCKAS
Trigger: GGAAGCCTTGCAGAACGGCCAGCTGGGCGGCGGGGA...TGAGAAGATCCTGAGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp ACCGCCGGGGGTTGCGCCGCCTGTCCCGGCTATTGTGGTAGTGTGGGCACGCATTTCTCAATCATGGCCTaGCTGGCCAAGACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TAGGCAACPGYCGSVGTHFSIMA*LAKTPG
Trigger: GCCTGGGGTCTTGGCCAGCCAGGCCATGATTGAGAA...ATGCGTGCCCACACTACCACAATAGCCGGGACAGGCGGCGCAACCCCCGGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp GGGGCCGCGCGGGCAGTACCCGGTTTGGCGCATGTCGTTGCATTTTGTAGATTTCTGGCGGCACAGGCGTaGCGGCTTCGGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: GAARAVPGLAHVVAFCRFLAAQA*RLRALL
Trigger: GAGCAGTGCCCGAAGCCGCCACGCCTGTGCCGCCAG...AAATCTACAAAATGCAACGACATGCGCCAAACCGGGTACTGCCCGCGCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp GCGTCCTTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCGAGGCAGCACCACTGGGGCTCAGGCGGTaGAGGAAGGTCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ASFPKEAQVLSGACEAAPLGLRR*RKVLCA
Trigger: TGCACACAGGACCTTCCTCCACCGCCTGAGCCCCAG...TGGTGCTGCCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGACGGGAGTGGCAATACTaGCAGCCGTCGCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGREWQY*QPSPPS
Trigger: CGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCG...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp GCTTCCTGGGCCTGCAGCTCCCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGGCAGTACCCGGTTTaGCGCATGTCGTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: ASWACSSLTSHTGGRRSRGQYPV*RMSLHF
Trigger: AAAATGCAACGACATGCGCCAAACCGGGTACTGCCC...CCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCTGCTTGGCGCGGAGCTaGAAGATCACCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: APSLALRGAGAQKQRPRTCLARS*KITCAS
Trigger: GGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCA...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397464.5
ENST00000674376.1
CDS-3UTR TCA 90 bp CAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTAGGACAGCAGTGTGCCCGGCTCTaGACGCAGGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QDAQRHLQGATKHHCLGQQCARL*TQGWRL
Trigger: CAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACTG...CTGTCCTAGGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGCACAAGGTTCCGTGTaGGGCCCCTCAGTCAGGACG +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRAQGSV*GPSVRT
Trigger: CGTCCTGACTGAGGGGCCTCACACGGAACCTTGTGC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR TCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCGTCCAGCTGCCGCCTaGCCCGGGCCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITARPAAA*PGPAQL
Trigger: GAGCTGAGCTGGCCCGGGTCAGGCGGCAGCTGGACG...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGTCCAGCTGCCGCCTaGCCCGGGCCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQRPAAA*PGPAQL
Trigger: GAGCTGAGCTGGCCCGGGTCAGGCGGCAGCTGGACG...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCACTCCTGACCTTAGGTaGTCCACCCGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPTPDLR*STRLPK
Trigger: CTTTGGGAGGCGGGTGGATCACCTAAGGTCAGGAGT...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp CACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCCACTGGCCACATGGATaGGCTCCGATGATAACTGGC +
Preference number: 4 (lower is better)
Translates to: HTRPEHLPHEQDQGGHGCHWPHG*APMITG
Trigger: GCCAGTTATCATCGGAGCTCATCCATGTGGCCAGTG...GCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGCCTCAGAGCCAGTACTaGTCTAGGGGAGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQPQSQY*SRGAGA
Trigger: GGCACCTGCTCCCCTAGATCAGTACTGGCTCTGAGG...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGACCTAGGAGCCATCCCTaGGGCCATGGCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGPRSHP*GHGHQD
Trigger: GTCTTGGTGGCCATGGCCTCAGGGATGGCTCCTAGG...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAACCTAGGAGCCATCCCTaGGGCCATGGCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQPRSHP*GHGHQD
Trigger: GTCTTGGTGGCCATGGCCTCAGGGATGGCTCCTAGG...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCGTGAGGTGGAGGTCGTaGCAGCCCCATTCATTCACC +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPVRWRS*QPHSFT
Trigger: GGTGAATGAATGGGGCTGTCACGACCTCCACCTCAC...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp TCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCGGGGATGGCGACAGGTaGAGAGCCGGCCAGCGACCT +
Preference number: 4 (lower is better)
Translates to: SCPHFQPWQRCQPFFGLPGDGDR*RAGQRP
Trigger: AGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCC...GGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACTGCAGAGCCCAGTGTaGCCGGCTCTGAACGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEALQSPV*PALNAG
Trigger: CCCTGCGTTCAGAGCCGGGCACACTGGGCTCTGCAG...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTAGGACAGTTGGCCTCGTCCAGCTaGCGCCTGACCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QDAQRHLQGATKHHCLGQLASSS*RLTRAS
Trigger: GCTGGCCCGGGTCAGGCGGCAGCTGGACGAGGCCAA...CTGTCCTAGGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCATCCTGCGCCTCTCGCTaGCAGGCATCGCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEASCASR*QASQTC
Trigger: GCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGA...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GGCTGTGGCCGGGTCCTCTCCTGTGACCTCACTGGCCACATGGATGAGCTCCGAAGCTCCTCCTGCAGCTaGTTCACCTGTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GCGRVLSCDLTGHMDELRSSSCS*FTCAST
Trigger: GGTGGAGGCACAGGTGAAGCAGCTGCAGGAGGAGCT...TCGGAGCTCATCCATGTGGCCAGTGAGGTCACAGGAGAGGACCCGGCCACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGAGCTCCTCCTGCAGCTaGTTCACCTGTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARSSSCS*FTCAST
Trigger: GGTGGAGGCACAGGTGAAGCAGCTGCAGGAGGAGCT...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGTCGGCAGGGGAATGGTaGCGATGTCCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQSAGEW*RCPHSP
Trigger: GGGGCTGTGGGGACATCGGCACCATTCCCCTGCCGA...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMVRTTN*CDHSAA
Trigger: CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAAGGACGGAGCTCTCCTaGTCCCACGCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEARTELS*SHATRL
Trigger: CAGCCTCGTGGCGTGGGAGCAGGAGAGCTCCGTCCT...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGCACGGACCACAGAAATaGAGGACGGAGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMHGPQK*RTELSC
Trigger: GCAGGAGAGCTCCGTCCTGCATTTCTGTGGTCCGTG...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAACAGGGTGGTCACGGGTaGTGGGGAGGCAACCACTCT +
Preference number: 4 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQQGGHG*WGGNHS
Trigger: AGAGTGGTTGCCTCCCCAGCACCCGTGACCACCCTG...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACGCGGGTCAGGTGACTaGCACATACACCCGGCACCC +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEARGSGD*HIHPAP
Trigger: GGGTGCCGGGTGTATGTGGCAGTCACCTGACCCGCG...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACGCTTCCCACTCGTGTaGCCTCACCACCCACGTGGC +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEARFPLV*PHHPRG
Trigger: GCCACGTGGGTGGTGAGGGCACACGAGTGGGAAGCG...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTGCTGCGCGCACTTGTaGTGTGAAAACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPCCAHL*CENRGH
Trigger: GTGCCCCCTGTTTTCACAGCACAAGTGCGCGCAGCA...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGTGAACGGCCGGTGCTaGGCGCACTTGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDVNGRC*AHLCCE
Trigger: TTCACAGCACAAGTGCGCGCAGCACCGGCCGTTCAC...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp TCCTTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCGAGGCAGCACCAGGTCAGGTGAACGGCCGGTaGTGCGCGCACTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SFPKEAQVLSGACEAAPGQVNGR*CAHLCC
Trigger: ACAGCACAAGTGCGCGCAGCACCGGCCGTTCACCTG...ACCTGGTGCTGCCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGCACGCAGTGGCCACGTaGGTCTGTCTCGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQHAVAT*VCLVDA
Trigger: TGCATCCACGAGACAGACGCACGTGGCCACTGCGTG...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp GGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCAGACCCAGGAAGGCTTCCTGGGCCTaGAGCTCCCTGACGTCACAC +
Preference number: 4 (lower is better)
Translates to: GLQRQAGCEVPNPQARPRKASWA*SSLTSH
Trigger: GTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGCCTT...CCTGGGTCTGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAAAGGCTTCCTGGGCCTaGAGCTCCCTGACGTCACAC +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTKASWA*SSLTSH
Trigger: GTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGCCTT...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp GGAGAAAGGGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCAACCCGGCGTCCCAGCTaGCAGCTGTACTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GERGFRGKQAARCQTHKPTRRPS*QLYWNR
Trigger: GCGGTTCCAGTACAGCTGGCAGCTGGGACGCCGGGT...TGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCCCTTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp GAGAAAGGGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCAGGAGGAAGGTCCTGTGTaGACCCTGGGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: EKGASEASRLRGAKPTSQEEGPV*TLGRAT
Trigger: GGTCGCCCTGCCCAGGGTGCACACAGGACCTTCCTC...CTGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCCCTTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCGCTCTTCTCAACGTGTaGAAAGGCACAGAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AGEATTLPVHCLTPARTPALLNV*KGTEGA
Trigger: GGCCCCTTCTGTGCCTTTGCACACGTTGAGAAGAGC...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGTTCTGCTTGCTGTCTTaGTCGCTGCCCCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMFCLLS*SLPLGP
Trigger: TGGCCCTAGGGGCAGCGAGCAAGACAGCAAGCAGAA...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAACCGAGCGGCGAGGTaGACGCAGAGGATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRNRAAR*TQRMAS
Trigger: ACTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTT...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATGGAGCCCACCGGCCCTaGGAGGGGCTGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDGAHRP*EGLGQR
Trigger: TCGCTGTCCCAGCCCCTCCCAGGGCCGGTGGGCTCC...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp ACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCATGCACTCGAAGAGGATaGGGGGCCGGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TNCCDHSAAWIPEAPGPSCTRRG*GAGTQD
Trigger: ATCCTGAGTGCCGGCCCCCCATCCTCTTCGAGTGCA...TGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCATGCTTGGCGCGGAGCTaGAAGATCACGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSCLARS*KITPST
Trigger: GGTGGACGGCGTGATCTTCCAGCTCCGCGCCAAGCA...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCATGCTTGGCGCGGAGCTaGAAGATCACGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPCLARS*KITPST
Trigger: GGTGGACGGCGTGATCTTCCAGCTCCGCGCCAAGCA...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GGTCAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTGCTGCGGCCGAAACGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GQVIAGMRSQSRFCCGRNGTQVR*PHTAHR
Trigger: TCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCC...GTTTCGGCCGCAGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GGCTGTGGCCGGGTCCTCTCCTGTGACCTCACTGGCCACATGGATGAGCTCCGAGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GCGRVLSCDLTGHMDELRVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...TCGGAGCTCATCCATGTGGCCAGTGAGGTCACAGGAGAGGACCCGGCCACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCACGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPRSSRR*HQKRVT
Trigger: CGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGDPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMDPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACACCCCATTTCCAACCCTaGCAGCGCTGCCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTPHFQP*QRCQPF
Trigger: GAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGG...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGCCCCATTTCCAACCCTaGCAGCGCTGCCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTPHFQP*QRCQPF
Trigger: GAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGG...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACAGCTGGCTTCGTTGTACTTaGAGCAGTACACGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: CGRNHTVAPGADGTGDHSWLRCT*SSTRRG
Trigger: GCCCCGACGTGTACTGCTCCAAGTACAACGAAGCCA...GCTGTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGCCATTCTTCACGCAGTaGCCACGTGCGTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRPFFTQ*PRASVS
Trigger: CGAGACAGACGCACGTGGCCACTGCGTGAAGAATGG...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp AGGCACAGAAGGGGCCGCGCGGGCAGTACCCGGTTTGGCGCATGTCGTTGCATTCAATCATGGCCTGGCTaGCCAAGACCCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RHRRGRAGSTRFGACRCIQSWPG*PRPQAA
Trigger: TGCAGCCTGGGGTCTTGGCCAGCCAGGCCATGATTG...AATGCAACGACATGCGCCAAACCGGGTACTGCCCGCGCGGCCCCTTCTGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp TGCAAAGGCACAGAAGGGGCCGCGCGGGCAGTACCCGGTTTGGCGCATGTCGTTTGCCCAGCACGAAGTTaGCATCTTGCCACCGGGGGT +
Preference number: 4 (lower is better)
Translates to: CKGTEGAARAVPGLAHVVCPARS*HLATGG
Trigger: ACCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCA...AACGACATGCGCCAAACCGGGTACTGCCCGCGCGGCCCCTTCTGTGCCTTTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp CAGAAGGGGCCGCGCGGGCAGTACCCGGTTTGGCGCATGTCGTTGCATTTTGTACACTGGGGCAGGGCGTaGACCTGTACTGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: QKGPRGQYPVWRMSLHFVHWGRA*TCTGTA
Trigger: GGCGGTTCCAGTACAGGTCCACGCCCTGCCCCAGTG...TACAAAATGCAACGACATGCGCCAAACCGGGTACTGCCCGCGCGGCCCCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp GGCACTGCTCCGTCTTGTAGCTGCCCAGCACGAAGTTGGCATCTTGCCACCGGGTGCTCCGTGCGGGAGTaGCAATACTGGCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: GTAPSCSCPARSWHLATGCSVRE*QYWQPS
Trigger: CGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCA...CCCGGTGGCAAGATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGCAGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCGCAAACACGGCCAGGTaGTTCTGCTTGCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: QATRTCRAGRQPAPTPRAANTAR*FCLLSC
Trigger: GCAAGACAGCAAGCAGAACCACCTGGCCGTGTTTGC...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR TCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGGGAGGCGTCATGGCTaGGGAGCCCACCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSGRRHG*GAHRPW
Trigger: CCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCC...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCAGTGTGCCCGGCTCTaGACGCAGGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQQCARL*TQGWRL
Trigger: CAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACTG...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAGCACAAGGTTCCGTGTaGGGCCCCTCAGTCAGGACG +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAAQGSV*GPSVRT
Trigger: CGTCCTGACTGAGGGGCCTCACACGGAACCTTGTGC...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR TCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGCGTGGGGGAACCTGTaGGCAGCAGGTCATGTGGTT +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRAWGNL*AAGHVV
Trigger: AACCACATGACCTGCTGCTCACAGGTTCCCCCACGC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR TCA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGTCCAGGCGCAGCTaGCTCTGCAGCGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRRSRRS*LCSECS
Trigger: GCTGCACTCGCTGCAGAGTCAGCTGCGCCTGGACCT...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCGGTGGCTGTCCCCGCTaGGGTCACCACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTGGCPR*GHHCRG
Trigger: GCCCCTGCAGTGGTGACCTCAGCGGGGACAGCCACC...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCGTRSE*RHVRGQ
Trigger: CTGACCACGGACATGTCGTCACTCGCTTCTGGTGCC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACTGTGCTCCAGGCCACTaGGAGGCTGTGGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDCAPGH*EAVAGS
Trigger: GGACCCGGCCACAGCCTCTCAGTGGCCTGGAGCACA...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGGACAGTCCCAGCCCTaGGCAGAAGGGTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRGQSQP*AEGSGH
Trigger: ATGACCTGACCCTTCTGCTCAGGGCTGGGACTGTCC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGCTGCTCCTGACCACTaGCAACCGGGAGATGTCTCG +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGAAPDH*QPGDVS
Trigger: CGAGACATCTCCCGGTTGTCAGTGGTCAGGAGCAGC...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAGAGCTCAGCTGCTCCTaGCCACTGACAACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQELSCS*PLTTGR
Trigger: TCTCCCGGTTGTCAGTGGTCAGGAGCAGCTGAGCTC...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACCAGTTACACACGTCGTaGCACCACTGTATCACGGCG +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHQLHTS*HHCITA
Trigger: CGCCGTGATACAGTGGTGTCACGACGTGTGTAACTG...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGGGCACTGCTCCGTCCTaGACTCCTTCAGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: NRKGSQPRSSRRWHQKRVGTAPS*TPSGTC
Trigger: ACAGGTACCTGAAGGAGTTCAGGACGGAGCAGTGCC...CACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCAGGTCGTGGCCGTCTTaGTCTTCCAGGTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: APSLALRGAGAQKQRPRTRSWPS*SSRSFS
Trigger: AGAGAAGGACCTGGAAGAGCAAGACGGCCACGACCT...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCGCAGGGGTGGCGGCTaGTGGGGAGGCGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDRRGGG*WGGVMA
Trigger: AGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCG...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCAAACAAAGTCCCAGATaGTCCCGGGGACACCGTTCA +
Preference number: 4 (lower is better)
Translates to: HTRPEHLPHEQDQGGHGCKQSPR*SRGHRS
Trigger: TGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTT...GCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAAGCTCCGTTTGGACTTaGACTCGAAGAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGSSVWT*TRRGWG
Trigger: CCCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCT...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATTTGGCCTCGTCCAGCTaGCGCCTGACCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDLASSS*RLTRAS
Trigger: GCTGGCCCGGGTCAGGCGGCAGCTGGACGAGGCCAA...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGCACGGACCACAGAAATaGAGGACGGAGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NRKGSQPRSSRRWHQKRVHGPQK*RTELSC
Trigger: GCAGGAGAGCTCCGTCCTGCATTTCTGTGGTCCGTG...CACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTCACCCGGGCTGGAGTaGGGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAASPGLE*GGAISA
Trigger: AGCCGAGATCGCGCCACCGCACTCCAGCCCGGGTGA...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACTCACCCGGGCTGGAGTaGGGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDSPGLE*GGAISA
Trigger: AGCCGAGATCGCGCCACCGCACTCCAGCCCGGGTGA...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGGTCATCGCGGGGATaGGTTCTCAGTCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: AGEATTLPVHCLTPARTPRSSRG*VLSHVS
Trigger: AGAAACGTGACTGAGAACGCATCCCCGCGATGACCT...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGAGGAGAAACACGTCGGTaGCGCTTCCCACTCGTGTGC +
Preference number: 4 (lower is better)
Translates to: SPSSLPDPCQDAQRHLQGGETRR*RFPLVC
Trigger: GCACACGAGTGGGAAGCGGCACCGACGTGTTTCTCC...TCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGACAGCCCCAGGATCTTaGCCCCATTTCCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTTAPGS*PHFQPW
Trigger: CCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTGT...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGTGAACGGCCGGTGCTaGGCGCACTTGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSVNGRC*AHLCCE
Trigger: TTCACAGCACAAGTGCGCGCAGCACCGGCCGTTCAC...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp AAGCCAGGCCAGGCACAACCAGAAGGCCGGGCTGGAGCAAGGAGGAGAAAGGGGAACGCAGGTGGTACTTaGGTTCTGTGTCCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: KPGQAQPEGRAGARRRKGNAGGT*VLCPPS
Trigger: CGACGGGGGACACAGAACGCAAGTACCACCTGCGTT...CCCCTTTCTCCTCCTTGCTCCAGCCCGGCCTTCTGGTTGTGCCTGGCCTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp TGGCGGCTTCGGGCACTGCTCCGTCTTGTAGCTGCCCAGCACGAAGTTGGCATCAAGGCTTCCTGGGCCTaGAGCTCCCTGACGTCACAC +
Preference number: 4 (lower is better)
Translates to: WRLRALLRLVAAQHEVGIKASWA*SSLTSH
Trigger: GTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGCCTT...GATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGCAGTGCCCGAAGCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp GCCAGGCCAGGCACAACCAGAAGGCCGGGCTGGAGCAAGGAGGAGAAAGGGGCTGCTCCGTCTTGTAGCTaGCCAGCACGAAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ARPGTTRRPGWSKEEKGAAPSCS*PARSWH
Trigger: ATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGC...AGCCCCTTTCTCCTCCTTGCTCCAGCCCGGCCTTCTGGTTGTGCCTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCGGAACCGCCGGGGGTTaGGCCGCCTGTCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: QHQVIQKRRGWLSAQRKSGTAGG*AACPGY
Trigger: ATAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCC...GCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp GGGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCAGACCCAGGCGAGGGTGGCTCTCTaGTCAAAGGAAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GASEASRLRGAKPTSQTQARVAL*SKEELD
Trigger: GTCCAGCTCTTCCTTTGAGCAGAGAGCCACCCTCGC...CTGGGTCTGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCACCAGGTGGTTCTGCTTaGTGTCTTGCTCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSPGGSA*CLARCP
Trigger: GGGGCAGCGAGCAAGACAGCAAGCAGAACCACCTGG...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGAGCCGGCCAGCGACCTaGGACCTGCTGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAASRPAT*DLLLPG
Trigger: ACCTGGGAGCAGCAGGTCCCAGGTCGCTGGCCGGCT...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATGCTGGGGAGGCGTCATaGCTGAGGAGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDAGEAS*LRSPPA
Trigger: GGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGC...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGATGCACTCGAAGAGGATaGGGGGCCGGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGCTRRG*GAGTQD
Trigger: ATCCTGAGTGCCGGCCCCCCATCCTCTTCGAGTGCA...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQRPHTA*RGAGRS
Trigger: TGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCT...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVRPHTA*RGAGRS
Trigger: TGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCT...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEARSSRR*HQKRVT
Trigger: CGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARDPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCCCATTCTTCACGCAGTaGCCACGTGCGTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVPFFTQ*PRASVS
Trigger: CGAGACAGACGCACGTGGCCACTGCGTGAAGAATGG...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp ACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCATTCTCAATCATGGCCTaGCTGGCCAAGACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TNCCDHSAAWIPEAPGPSFSIMA*LAKTPG
Trigger: GCCTGGGGTCTTGGCCAGCCAGGCCATGATTGAGAA...TGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp TCCTTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCGAGGCAGCACCAGGTTGCCCAGCACGAAGTTaGCATCTTGCCACCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SFPKEAQVLSGACEAAPGCPARS*HLATGG
Trigger: ACCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCA...ACCTGGTGCTGCCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCATGCCCAGCACGAAGTTaGCATCTTGCCACCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSCPARS*HLATGG
Trigger: ACCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCA...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCGCTATTGTGGTAGTGTaGGCACGCATAGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVAIVVV*ARIALA
Trigger: CGCCAGGGCTATGCGTGCCCACACTACCACAATAGC...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGGCAAACACGGCCAGGTaGTTCTGCTTGCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMANTAR*FCLLSC
Trigger: GCAAGACAGCAAGCAGAACCACCTGGCCGTGTTTGC...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGGTGGCTGTCCCCGCTaGGGTCACCACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSGGCPR*GHHCRG
Trigger: GCCCCTGCAGTGGTGACCTCAGCGGGGACAGCCACC...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQGTRSE*RHVRGQ
Trigger: CTGACCACGGACATGTCGTCACTCGCTTCTGGTGCC...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATGCAGCGCGGGTCAGGTaGCTGCCACATACACCCGGC +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDAARVR*LPHTPG
Trigger: GCCGGGTGTATGTGGCAGTCACCTGACCCGCGCTGC...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp ACAAGGAGTGGGGCGTCCTTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCGGCACTGCTCCGTCCTaGACTCCTTCAGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: TRSGASFPKEAQVLSGACGTAPS*TPSGTC
Trigger: ACAGGTACCTGAAGGAGTTCAGGACGGAGCAGTGCC...GCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGACGCCCCACTCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCGGGGATGGCGACAGGTaGAGAGCCGGCCAGCGACCT +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTGDGDR*RAGQRP
Trigger: AGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCC...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCCGCAGGGGTGGCGGCTaGTGGGGAGGCGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSRRGGG*WGGVMA
Trigger: AGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCG...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACCTGCAGAGCCCAGTGTaGCCGGCTCTGAACGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDLQSPV*PALNAG
Trigger: CCCTGCGTTCAGAGCCGGGCACACTGGGCTCTGCAG...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGAAACAAAGTCCCAGATaGTCCCGGGGACACCGTTCA +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMKQSPR*SRGHRS
Trigger: TGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTT...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGGCTGGGGGAGAAGCTaGCGGAAACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRGWGRS*RKQSPR
Trigger: TCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGGCTGGGGGAGAAGCTaGCGGAAACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGGWGRS*RKQSPR
Trigger: TCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCTGGGGGAGAAGCTaGCGGAAACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPGWGRS*RKQSPR
Trigger: TCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACAGCTCCGTTTGGACTTaGACTCGAAGAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDSSVWT*TRRGWG
Trigger: CCCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCT...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCTTGGCCTCGTCCAGCTaGCGCCTGACCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSLASSS*RLTRAS
Trigger: GCTGGCCCGGGTCAGGCGGCAGCTGGACGAGGCCAA...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRVRTTN*CDHSAA
Trigger: CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSVRTTN*CDHSAA
Trigger: CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCVRTTN*CDHSAA
Trigger: CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGCACGGACCACAGAAATaGAGGACGGAGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRHGPQK*RTELSC
Trigger: GCAGGAGAGCTCCGTCCTGCATTTCTGTGGTCCGTG...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGATCTCAGTCACGTTTCTaGTGCGGCCGAAACCACACT +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGSQSRF*CGRNHT
Trigger: AGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGA...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGCAACCCTGGCAGCGCTaGCAGCCATTCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTQPWQR*QPFFGL
Trigger: AAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTG...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGCTCTCCGGGGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGTGCTGCGCGCACTTGTaGTGTGAAAACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: CSPGHARQHQVIQKRRGWCCAHL*CENRGH
Trigger: GTGCCCCCTGTTTTCACAGCACAAGTGCGCGCAGCA...CCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCCCCGGAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CAGAGGGAGACTGAACGTGGCATAACAACAAGGAGTGGGGCGTCCTTCCCAAAGAGGTCCAGGGGGCCGTaGGCGAAGGCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QRETERGITTRSGASFPKRSRGP*AKAQCS
Trigger: GCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCT...CTTTGGGAAGGACGCCCCACTCCTTGTTGTTATGCCACGTTCAGTCTCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGAGGTCCAGGGGGCCGTaGGCGAAGGCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITARSRGP*AKAQCS
Trigger: GCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCT...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGCTCTTCTCAACGTGTaGAAAGGCACAGAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: APEASDDMSVVRRSAGARALLNV*KGTEGA
Trigger: GGCCCCTTCTGTGCCTTTGCACACGTTGAGAAGAGC...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGGAGCAGCAGGTCATGTaGTTTGCCACCACAGATAGG +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSREQQVM*FATTDR
Trigger: CCTATCTGTGGTGGCAAACCACATGACCTGCTGCTC...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CCA 90 bp CCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTGCTGCACTCGAAGAGGATaGGGGGCCGGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PPFPTLAALPAILWSSHCCTRRG*GAGTQD
Trigger: ATCCTGAGTGCCGGCCCCCCATCCTCTTCGAGTGCA...GCAGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGTGCACTCGAAGAGGATaGGGGGCCGGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQCTRRG*GAGTQD
Trigger: ATCCTGAGTGCCGGCCCCCCATCCTCTTCGAGTGCA...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGACAGCTCAGCTCCGTTTaGACTTGCACTCGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGQLSSV*TCTRRG
Trigger: TCCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTG...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCCGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: SCPHFQPWQRCQPFFGLPRSSRR*HQKRVT
Trigger: CGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG...GGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCDPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCGGGCTGGAGTGCGGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDRAGVR*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCCG...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp CTCAGGTGCGGTGGCCGCACACGGCTCACAGAGGATGTGGTGCTGACAGGGCCGACCTCACTGGCCACATaGATGAGCTCCGATGATAAC +
Preference number: 4 (lower is better)
Translates to: LRCGGRTRLTEDVVLTGPTSLAT*MSSDDN
Trigger: GTTATCATCGGAGCTCATCCATGTGGCCAGTGAGGT...CGGCCCTGTCAGCACCACATCCTCTGTGAGCCGTGTGCGGCCACCGCACCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403703.5
CDS-3UTR CCA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCAAAGAGCAGAGCAGCTaGCAGACTAGAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPKEQSS*QTRAQL
Trigger: CAGCTGAGCTCTAGTCTGCCAGCTGCTCTGCTCTTT...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAAAGAGCAGAGCAGCTaGCAGACTAGAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRKEQSS*QTRAQL
Trigger: CAGCTGAGCTCTAGTCTGCCAGCTGCTCTGCTCTTT...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGGAAGCTGAGCCCTaGAGACACCCTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITAPEAEP*RHPEGR
Trigger: CCGCCCCTCAGGGTGTCTCCAGGGCTCAGCTTCCGG...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCCGGAAGCTGAGCCCTaGAGACACCCTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDPEAEP*RHPEGR
Trigger: CCGCCCCTCAGGGTGTCTCCAGGGCTCAGCTTCCGG...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCATCCCTGAGGCCATaGCCACCAAGACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAPSLRP*PPRQVR
Trigger: CCTCACCTGTCTTGGTGGCCATGGCCTCAGGGATGG...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GCGTCCTTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCGAGGCAGCACCATGGCTTCGTTGTACTTaGAGCAGTACACGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: ASFPKEAQVLSGACEAAPWLRCT*SSTRRG
Trigger: GCCCCGACGTGTACTGCTCCAAGTACAACGAAGCCA...TGGTGCTGCCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAAGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGTGCCCAGCACGAAGTTaGCATCTTGCCACCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQCPARS*HLATGG
Trigger: ACCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCA...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp GAGAAAGGGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCAGACCAGAAGGCCGGGCTaGAGCAAGGAGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: EKGASEASRLRGAKPTSQTRRPG*SKEEKG
Trigger: CCCTTTCTCCTCCTTGCTCCAGCCCGGCCTTCTGGT...CTGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCCCTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp AAGCCAGGCCAGGCACAACCAGAAGGCCGGGCTGGAGCAAGGAGGAGAAAGGGGGCTCAAAGGAAGAGCTaGACACAGACAGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KPGQAQPEGRAGARRRKGAQRKS*TQTGPQ
Trigger: CTGAGGCCCTGTCTGTGTCCAGCTCTTCCTTTGAGC...CCCCTTTCTCCTCCTTGCTCCAGCCCGGCCTTCTGGTTGTGCCTGGCCTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGCACTGGGGCAGGGCGTaGACCTGTACTGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAAHWGRA*TCTGTA
Trigger: GGCGGTTCCAGTACAGGTCCACGCCCTGCCCCAGTG...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGTTGGCATTTCCCGGCTaGCCGCTGCCCGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRLAFPG*PLPVEE
Trigger: TTCCTCCACGGGCAGCGGCCAGCCGGGAAATGCCAA...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGGCGTGGGGGAACCTGTaGGCAGCAGGTCATGTGGTT +
Preference number: 4 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRAWGNL*AAGHVV
Trigger: AACCACATGACCTGCTGCTCACAGGTTCCCCCACGC...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR TCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGTCCCAGTTCACTGCCTaGCCCCTGCCAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQSQFTA*PLPGRP
Trigger: TGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGA...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAACACTGGCCACATGGATaGGCTCCGATGATAACTGGC +
Preference number: 4 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQHWPHG*APMITG
Trigger: GCCAGTTATCATCGGAGCTCATCCATGTGGCCAGTG...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp TCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGACACTGGCCACATGGATaGGCTCCGATGATAACTGGC +
Preference number: 4 (lower is better)
Translates to: SPSSLPDPCQDAQRHLQGHWPHG*APMITG
Trigger: GCCAGTTATCATCGGAGCTCATCCATGTGGCCAGTG...TCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGCGGAACAAGGTCTGCTaGCCACAGTTACACACGTCG +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRRNKVC*PQLHTS
Trigger: CGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCG...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp TCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCCGCGCACTTGTGCTGTaGAAACAGGGGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: SCPHFQPWQRCQPFFGLPRALVL*KQGALL
Trigger: GAGCAGTGCCCCCTGTTTTCACAGCACAAGTGCGCG...GGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR TCA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGCGCGCACTTGTGCTGTaGAAACAGGGGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRRALVL*KQGALL
Trigger: GAGCAGTGCCCCCTGTTTTCACAGCACAAGTGCGCG...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCCTGCAGAGCCCAGTGTaGCCGGCTCTGAACGCAGGG +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSALQSPV*PALNAG
Trigger: CCCTGCGTTCAGAGCCGGGCACACTGGGCTCTGCAG...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAACAAAGTCCCAGATaGTCCCGGGGACACCGTTCA +
Preference number: 4 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQKQSPR*SRGHRS
Trigger: TGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTT...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAAGCTCCGTTTGGACTTaGACTCGAAGAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGSSVWT*TRRGWG
Trigger: CCCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCT...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGTCCTGCGCCTCTCGCTaGCAGGCATCGCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQSCASR*QASQTC
Trigger: GCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGA...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSARQATH*LARSWK
Trigger: CTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCG...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAGTCAGGACCACAAACTaGTGTGATCACAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAVRTTN*CDHSAA
Trigger: CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp CTGAGCAGAAGGGTCAGGTCATCGCGGGGATGCGTTCTCAGTCACGTTTCTGCTTCACTGCCTGACCCCTaGCAGGACGCCCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: LSRRVRSSRGCVLSHVSASLPDP*QDAQRH
Trigger: ATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGA...AGCAGAAACGTGACTGAGAACGCATCCCCGCGATGACCTGACCCTTCTGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGCCGTAAACCACAGATaGCTGTTCCTGCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTAVNHR*LFLLNS
Trigger: GGAGTTGAGCAGGAACAGGCATCTGTGGTTTACGGC...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGCTCTCCGGGGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGTTTCAGTCAAAACAATaGAGCGCGCATGCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: CSPGHARQHQVIQKRRGWFQSKQ*SAHAPR
Trigger: GCGCGGCGCATGCGCGCTGCATTGTTTTGACTGAAA...CCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCCCCGGAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGAAAACAGGGGGCACTaGTCCGTCCTGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGENRGH*SVLNSF
Trigger: GAAGGAGTTCAGGACGGAGCAGTGCCCCCTGTTTTC...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CAGAAGGGGCCGCGCGGGCAGTACCCGGTTTGGCGCATGTCGTTGCATTTTGTATGCGCGAAGGCACAGTaGAGCCCATTCTTCACGCAG +
Preference number: 4 (lower is better)
Translates to: QKGPRGQYPVWRMSLHFVCAKAQ*SPFFTQ
Trigger: CTGCGTGAAGAATGGGCTGCACTGTGCCTTCGCGCA...TACAAAATGCAACGACATGCGCCAAACCGGGTACTGCCCGCGCGGCCCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGTGCGCGAAGGCACAGTaGAGCCCATTCTTCACGCAG +
Preference number: 4 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQCAKAQ*SPFFTQ
Trigger: CTGCGTGAAGAATGGGCTGCACTGTGCCTTCGCGCA...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CAGAGGGAGACTGAACGTGGCATAACAACAAGGAGTGGGGCGTCCTTCCCAAAGCCCAGCTGGCCGTTCTaGAAGGCTTCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QRETERGITTRSGASFPKPSWPF*KASWAC
Trigger: GCAGGCCCAGGAAGCCTTGCAGAACGGCCAGCTGGG...CTTTGGGAAGGACGCCCCACTCCTTGTTGTTATGCCACGTTCAGTCTCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGCTCCGTCTTGTAGCTaGCCAGCACGAAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSAPSCS*PARSWH
Trigger: ATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGC...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp GGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAGCAGGCTGCGAGGTaGCAAACCCACAAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GMRGSTRSFKRGEGGSLLKQAAR*QTHKPD
Trigger: GTCTGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTT...GAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp GGGGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCCTCTCAGGTGCAAACTaGAGACAGGAGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GACEAAPGHSKEARVALCLSGAN*RQEASQ
Trigger: CTGGCTTGCCTCCTGTCTGCAGTTTGCACCTGAGAG...GCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCGGCGGGTGGACCGCTaGAAACACGGCCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDRRVDR*KHGQVV
Trigger: AACCACCTGGCCGTGTTTGCAGCGGTCCACCCGCCG...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CGGCGAATGTCGAACACTAGAGTTACAGACGACAGGCAACAAGAACATGCAGAGGGACGGCCTCCACAGTaGTGCTGGCGGGGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: RRMSNTRVTDDRQQEHAEGRPPQ*CWRGRA
Trigger: CGCTCGGCCCCGCCAGCAGCACTGTGGAGGCCGTCC...CTCTGCATGTTCTTGTTGCCTGTCGTCTGTAACTCTAGTGTTCGACATTCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp TCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAGCCGGCCAGCGACCTaGGACCTGCTGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SADHSYTRRDTTVSRRMSSRPAT*DLLLPG
Trigger: ACCTGGGAGCAGCAGGTCCCAGGTCGCTGGCCGGCT...CGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCAGCCGGCCAGCGACCTaGGACCTGCTGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSSRPAT*DLLLPG
Trigger: ACCTGGGAGCAGCAGGTCCCAGGTCGCTGGCCGGCT...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGGTAGCGATGGTGCTCTaGGCAGGGAGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITAVAMVL*AGSRGW
Trigger: CCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTAC...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCGTAGCGATGGTGCTCTaGGCAGGGAGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTVAMVL*AGSRGW
Trigger: CCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTAC...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACAACCGAGCGGCGAGGTaGACGCAGAGGATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDNRAAR*TQRMAS
Trigger: ACTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTT...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGGCCGGATCTTCCTCTTaGCCTCGTCCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQAGSSS*PRPAAA
Trigger: GGCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGC...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp CCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTGCAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: PPFPTLAALPAILWSSHCRPHTA*RGAGRS
Trigger: TGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCT...GCAGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEARPHTA*RGAGRS
Trigger: TGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCT...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTAGGACAGCGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: QDAQRHLQGATKHHCLGQRSSRR*HQKRVT
Trigger: CGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG...CTGTCCTAGGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATGGTGGTCACGGGTGCTaGGGAGGCAACCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDGGHGC*GGNHSP
Trigger: GGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCACC...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACACCTCACTGGCCACATaGATGAGCTCCGATGATAAC +
Preference number: 4 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHTSLAT*MSSDDN
Trigger: GTTATCATCGGAGCTCATCCATGTGGCCAGTGAGGT...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GGCACTGCTCCGTCTTGTAGCTGCCCAGCACGAAGTTGGCATCTTGCCACCGGGTGGCTTCGTTGTACTTaGAGCAGTACACGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GTAPSCSCPARSWHLATGWLRCT*SSTRRG
Trigger: GCCCCGACGTGTACTGCTCCAAGTACAACGAAGCCA...CCCGGTGGCAAGATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp GGAGAAAGGGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCACCATTCTTCACGCAGTaGCCACGTGCGTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: GERGFRGKQAARCQTHKPPFFTQ*PRASVS
Trigger: CGAGACAGACGCACGTGGCCACTGCGTGAAGAATGG...TGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCCCTTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp TCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCCAATCATGGCCTGGCTaGCCAAGACCCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SCPHFQPWQRCQPFFGLPQSWPG*PRPQAA
Trigger: TGCAGCCTGGGGTCTTGGCCAGCCAGGCCATGATTG...GGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp CAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCAGCTGCCAGCTGTACTaGAACCGCCGGGGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: QHQVIQKRRGWLSAQRKSSCQLY*NRRGLR
Trigger: GCGCAACCCCCGGCGGTTCCAGTACAGCTGGCAGCT...GCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp CAGAGGGAGACTGAACGTGGCATAACAACAAGGAGTGGGGCGTCCTTCCCAAAGGGGCAGGGCGACCCTTaGGTTGTTGGCCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: QRETERGITTRSGASFPKGQGDP*VVGPGT
Trigger: AGTCCCAGGGCCAACAACCCAAGGGTCGCCCTGCCC...CTTTGGGAAGGACGCCCCACTCCTTGTTGTTATGCCACGTTCAGTCTCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp CAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCGTCCTGTGTGCACCCTaGGCAGGGCGACCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QHQVIQKRRGWLSAQRKSVLCAP*AGRPLG
Trigger: ACCCAAGGGTCGCCCTGCCCAGGGTGCACACAGGAC...GCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR CAA 72 bp GGCGTGGGGGAACCTGTGAGCAGCAGGTCATGTGGTTaGCCACCACAGATAGGGCACAAGGTTCCGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GVGEPVSSRSCG*PPQIGHKVPCE
Trigger: CTCACACGGAACCTTGTGCCCTATCTGTGGTGGCAAACCACATGACCTGCTGCTCACAGGTTCCCCCACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403703.5
CDS-3UTR TCA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAATAGGTGACAACGTGTaGCAGGAAAGGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGIGDNV*QERLSG
Trigger: GCCTGACAGCCTTTCCTGTCACACGTTGTCACCTAT...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGATAGGTGACAACGTGTaGCAGGAAAGGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRIGDNV*QERLSG
Trigger: GCCTGACAGCCTTTCCTGTCACACGTTGTCACCTAT...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTAGGACAGCCTCAGAGCCAGTACTaGTCTAGGGGAGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QDAQRHLQGATKHHCLGQPQSQY*SRGAGA
Trigger: GGCACCTGCTCCCCTAGATCAGTACTGGCTCTGAGG...CTGTCCTAGGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTAGGACAGCAGGCATCGCAGACCTaGTTCACCTGCTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QDAQRHLQGATKHHCLGQQASQT*FTCCQD
Trigger: GTCCTGGCAGCAGGTGAAGCAGGTCTGCGATGCCTG...CTGTCCTAGGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AEQGLLTTVTHVVTPLYHRQATH*LARSWK
Trigger: CTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCG...GTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAGTAGGGGCACTCAGGTaGGGTGGCCGCACACGGCTC +
Preference number: 4 (lower is better)
Translates to: DVSADTTYPRKDQRLQMGVGALR*GGRTRL
Trigger: GAGCCGTGTGCGGCCACCGCACCTGAGTGCCCCTAC...TCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCAGGGGCTGGCCCTTaGAGTAGGGGCACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSAGAGP*SRGTQV
Trigger: CACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGC...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCAGGACGGAGCTCTCCTaGTCCCACGCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSRTELS*SHATRL
Trigger: CAGCCTCGTGGCGTGGGAGCAGGAGAGCTCCGTCCT...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGATCTCAGTCACGTTTCTaGTGCGGCCGAAACCACACT +
Preference number: 4 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGSQSRF*CGRNHT
Trigger: AGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGA...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAAGGTCATCGCGGGGATaGGTTCTCAGTCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPRSSRG*VLSHVS
Trigger: AGAAACGTGACTGAGAACGCATCCCCGCGATGACCT...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCGCCGTAAACCACAGATaGCTGTTCCTGCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: LLSEAQAHRNSGHGPQKCAVNHR*LFLLNS
Trigger: GGAGTTGAGCAGGAACAGGCATCTGTGGTTTACGGC...GCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GGAGAAAGGGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCAGAAAACAGGGGGCACTaGTCCGTCCTGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: GERGFRGKQAARCQTHKPENRGH*SVLNSF
Trigger: GAAGGAGTTCAGGACGGAGCAGTGCCCCCTGTTTTC...TGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCCCTTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp ACGAAGTTGGCATCTTGCCACCGGGGGTCCTCGCTCAGGATCTTCTCAATCATGCAGGTGAACGGCCGGTaGTGCGCGCACTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TKLASCHRGSSLRIFSIMQVNGR*CAHLCC
Trigger: ACAGCACAAGTGCGCGCAGCACCGGCCGTTCACCTG...CATGATTGAGAAGATCCTGAGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGCACGCAGTGGCCACGTaGGTCTGTCTCGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAAHAVAT*VCLVDA
Trigger: TGCATCCACGAGACAGACGCACGTGGCCACTGCGTG...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTCGGGATGGAACTGCTaGTCCGTGCGGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAASGWNC*SVREWQ
Trigger: TTGCCACTCCCGCACGGAGCAGCAGTTCCATCCCGA...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCGGCCTCCACAGTGCTaGTGGCGGGGCCGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSRPPQC*WRGRAG
Trigger: TCCCGCTCGGCCCCGCCAGCAGCACTGTGGAGGCCG...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp GCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGTAGCGATGGTGCTCTaGGCAGGGAGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: AEQGLLTTVTHVVTPLYHVAMVL*AGSRGW
Trigger: CCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTAC...GTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCAACCGAGCGGCGAGGTaGACGCAGAGGATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTNRAAR*TQRMAS
Trigger: ACTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTT...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAGTCAGGACGGCATCTaGGAGGGAGCCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: SADHSYTRRDTTVSRRMSSQDGI*EGAPRR
Trigger: CCTCCGTGGGGCTCCCTCCCAGATGCCGTCCTGACT...CGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGCAGCTCAGCTCCGTTTaGACTTGCACTCGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRQLSSV*TCTRRG
Trigger: TCCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTG...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGGCCGGATCTTCCTCTTaGCCTCGTCCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SADHSYTRRDTTVSRRMSAGSSS*PRPAAA
Trigger: GGCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGC...CGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACCACGGGCACGCTCCTTaGCCTCCTGCGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHHGHAP*PPAPLA
Trigger: AGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTG...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCTTCGGCAGGGGAATaGTGCCGATGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSAASAGE*CRCPHS
Trigger: GCTGTGGGGACATCGGCACCATTCCCCTGCCGAAGC...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTGGCACTCAGGTGCGGTaGCCGCACACGGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECGTQVR*PHTAHR
Trigger: TCTGTGAGCCGTGTGCGGCCACCGCACCTGAGTGCC...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACGATCACAGCGCCGCGTaGATCCCGGAGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHDHSAA*IPEAPG
Trigger: GCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATC...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp ACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCAACCTCACTGGCCACATaGATGAGCTCCGATGATAAC +
Preference number: 4 (lower is better)
Translates to: TNCCDHSAAWIPEAPGPSTSLAT*MSSDDN
Trigger: GTTATCATCGGAGCTCATCCATGTGGCCAGTGAGGT...TGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGAAAAGAGCAGAGCAGCTaGCAGACTAGAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPSSLPDPCQDAQRHLQGKEQSS*QTRAQL
Trigger: CAGCTGAGCTCTAGTCTGCCAGCTGCTCTGCTCTTT...TCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp ACGAAGTTGGCATCTTGCCACCGGGGGTCCTCGCTCAGGATCTTCTCAATCATGCGGGGCACACGCCGGTaGCTTCGTTGTACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TKLASCHRGSSLRIFSIMRGTRR*LRCTWS
Trigger: GCTCCAAGTACAACGAAGCCACCGGCGTGTGCCCCG...CATGATTGAGAAGATCCTGAGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCCGGGGCACACGCCGGTaGCTTCGTTGTACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTRGTRR*LRCTWS
Trigger: GCTCCAAGTACAACGAAGCCACCGGCGTGTGCCCCG...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCGGGGCACACGCCGGTaGCTTCGTTGTACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDRGTRR*LRCTWS
Trigger: GCTCCAAGTACAACGAAGCCACCGGCGTGTGCCCCG...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp TGCTCTCCGGGGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCAAAAGAGGCGAGGGTaGCTCTCTGCTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: CSPGHARQHQVIQKRRGWQKRRG*LSAQRK
Trigger: CTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTG...CCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCCCCGGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGGGAGTGGCAATACTaGCAGCCGTCGCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECREWQY*QPSPPS
Trigger: CGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCG...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGGCAGTACCCGGTTTaGCGCATGTCGTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSGQYPV*RMSLHF
Trigger: AAAATGCAACGACATGCGCCAAACCGGGTACTGCCC...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGCTTGGCGCGGAGCTaGAAGATCACCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAACLARS*KITCAS
Trigger: GGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCA...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397464.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTGGTGGCTGTCCCCGCTaGGGTCACCACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSGGCPR*GHHCRG
Trigger: GCCCCTGCAGTGGTGACCTCAGCGGGGACAGCCACC...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDGTRSE*RHVRGQ
Trigger: CTGACCACGGACATGTCGTCACTCGCTTCTGGTGCC...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSAGTRSE*RHVRGQ
Trigger: CTGACCACGGACATGTCGTCACTCGCTTCTGGTGCC...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCCTCAGAGCCAGTACTaGTCTAGGGGAGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDPQSQY*SRGAGA
Trigger: GGCACCTGCTCCCCTAGATCAGTACTGGCTCTGAGG...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGCTGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACTTCACATTGCTAAGATaGAGGTCTAACGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: CCGRNHTVAPGADGTGDHFTLLR*RSNAEP
Trigger: AGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAA...GTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR GCA 90 bp ACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCAAACAAAGTCCCAGATaGTCCCGGGGACACCGTTCA +
Preference number: 4 (lower is better)
Translates to: TPARTPSDISKELQSTIAKQSPR*SRGHRS
Trigger: TGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTT...GGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGCTCCGTTTGGACTTaGACTCGAAGAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRSSVWT*TRRGWG
Trigger: CCCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCT...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp GATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGATCCTGCGCCTCTCGCTaGCAGGCATCGCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: DVSADTTYPRKDQRLQMGSCASR*QASQTC
Trigger: GCAGGTCTGCGATGCCTGGCAGCGAGAGGCGCAGGA...TCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGAGCTCCTCCTGCAGCTaGTTCACCTGTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITASSSCS*FTCAST
Trigger: GGTGGAGGCACAGGTGAAGCAGCTGCAGGAGGAGCT...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACGTCGCTTCCCCCGTGTaGTCCAGGCCACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHVASPV*SRPLRG
Trigger: GCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGAC...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACCGCTTCCCACTCGTGTaGCCTCACCACCCACGTGGC +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHRFPLV*PHHPRG
Trigger: GCCACGTGGGTGGTGAGGGCACACGAGTGGGAAGCG...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGGAGAAACACGTCGGTaGCGCTTCCCACTCGTGTGC +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSAGETRR*RFPLVC
Trigger: GCACACGAGTGGGAAGCGGCACCGACGTGTTTCTCC...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGGGAGAAACACGTCGGTaGCGCTTCCCACTCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITAGETRR*RFPLVC
Trigger: GCACACGAGTGGGAAGCGGCACCGACGTGTTTCTCC...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTCAACCCTGGCAGCGCTaGCAGCCATTCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CPHFQPWQRCQPFFGLPTQPWQR*QPFFGL
Trigger: AAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTG...AGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCCGCTCAGCGCCGCTaGCGCCGCTTTCGAAACCGA +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWEPAQRR*RRFRNR
Trigger: TCGGTTTCGAAAGCGGCGGCAGCGGCGCTGAGCGGG...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp CAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCGTGAACGGCCGGTGCTaGGCGCACTTGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: QHQVIQKRRGWLSAQRKSVNGRC*AHLCCE
Trigger: TTCACAGCACAAGTGCGCGCAGCACCGGCCGTTCAC...GCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGTCGGGATGGAACTGCTaGTCCGTGCGGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITASGWNC*SVREWQ
Trigger: TTGCCACTCCCGCACGGAGCAGCAGTTCCATCCCGA...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCATCTCGGGATGGAACTaGTGCTCCGTGCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSAISGWN*CSVREW
Trigger: CCACTCCCGCACGGAGCAGCAGTTCCATCCCGAGAT...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSAGSRG*RQVQSR
Trigger: CCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGC...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSAVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCGTGACGACATGTCCGTaGTCAGGAGGAGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTVTTCP*SGGALE
Trigger: CTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACCCCACGCCACGAGGCTaGAACATCAGCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHPTPRG*NISPSA
Trigger: GGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGG...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAATCCCCGCCGCCCAGCTaGCCGTTCTGCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWESPPPS*PFCKAS
Trigger: GGAAGCCTTGCAGAACGGCCAGCTGGGCGGCGGGGA...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp CAGAGGGAGACTGAACGTGGCATAACAACAAGGAGTGGGGCGTCCTTCCCAAAGCAATCATGGCCTGGCTaGCCAAGACCCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QRETERGITTRSGASFPKQSWPG*PRPQAA
Trigger: TGCAGCCTGGGGTCTTGGCCAGCCAGGCCATGATTG...CTTTGGGAAGGACGCCCCACTCCTTGTTGTTATGCCACGTTCAGTCTCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp TGCTCTCCGGGGCATGCGAGGCAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCATAACAACAAGGAGTaGGGCGTCCTTCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CSPGHARQHQVIQKRRGWHNNKE*GVLPKG
Trigger: TCCTTTGGGAAGGACGCCCCACTCCTTGTTGTTATG...CCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCCTCGCATGCCCCGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGTGCTTGGCGCGGAGCTaGAAGATCACCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITACLARS*KITCAS
Trigger: GGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCA...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397464.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGGCACCAGAAGCGAGTaGCGACATGTCCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSGTRSE*RHVRGQ
Trigger: CTGACCACGGACATGTCGTCACTCGCTTCTGGTGCC...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGGACCACAAACTGCTGTaGTCACAGCGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQDHKLL*SQRRVD
Trigger: ATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTC...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGACTCCTGACCTTAGGTaGTCCACCCGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQTPDLR*STRLPK
Trigger: CTTTGGGAGGCGGGTGGATCACCTAAGGTCAGGAGT...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp TCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGGAGCTCAGCTGCTCCTaGCCACTGACAACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SADHSYTRRDTTVSRRMSELSCS*PLTTGR
Trigger: TCTCCCGGTTGTCAGTGGTCAGGAGCAGCTGAGCTC...CGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATGGCACTGCTCCGTCCTaGACTCCTTCAGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDGTAPS*TPSGTC
Trigger: ACAGGTACCTGAAGGAGTTCAGGACGGAGCAGTGCC...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCGTGAGGTGGAGGTCGTaGCAGCCCCATTCATTCACC +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTVRWRS*QPHSFT
Trigger: GGTGAATGAATGGGGCTGTCACGACCTCCACCTCAC...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGGGCTCCCAGCCTCATGTTCACATTGCTAAGATaGAGGTCTAACGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: RVTGKAVRPSAGGAPSLMFTLLR*RSNAEP
Trigger: AGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAA...CATGAGGCTGGGAGCCCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTGGGGATGGCGACAGGTaGAGAGCCGGCCAGCGACCT +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSGDGDR*RAGQRP
Trigger: AGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCC...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCCAGGCATCGCAGACCTaGTTCACCTGCTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSQASQT*FTCCQD
Trigger: GTCCTGGCAGCAGGTGAAGCAGGTCTGCGATGCCTG...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACTCACTGCCTGACCCCTaGCAGGACGCCCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHSLPDP*QDAQRH
Trigger: ATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGA...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CGGCGAATGTCGAACACTAGAGTTACAGACGACAGGCAACAAGAACATGCAGAGGTCGCTTCCCCCGTGTaGTCCAGGCCACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RRMSNTRVTDDRQQEHAEVASPV*SRPLRG
Trigger: GCCTCTCAGTGGCCTGGAGCACACGGGGGAAGCGAC...CTCTGCATGTTCTTGTTGCCTGTCGTCTGTAACTCTAGTGTTCGACATTCGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACCAGTCACGTTTCTGCTaGGGCCGAAACCACACTGTC +
Preference number: 4 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDQSRFC*GRNHTV
Trigger: GACAGTGTGGTTTCGGCCGCAGCAGAAACGTGACTG...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp TCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGCAGGCAACAAGAACATaGAGAGCCGGCCGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SADHSYTRRDTTVSRRMSQATRT*RAGRQP
Trigger: TGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG...CGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp ACGAAGTTGGCATCTTGCCACCGGGGGTCCTCGCTCAGGATCTTCTCAATCATGAACGCAGGTGGTACTTaGGTTCTGTGTCCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: TKLASCHRGSSLRIFSIMNAGGT*VLCPPS
Trigger: CGACGGGGGACACAGAACGCAAGTACCACCTGCGTT...CATGATTGAGAAGATCCTGAGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR GCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCAACGCAGGTGGTACTTaGGTTCTGTGTCCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTNAGGT*VLCPPS
Trigger: CGACGGGGGACACAGAACGCAAGTACCACCTGCGTT...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp CAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCTGCGCGAAGGCACAGTaGAGCCCATTCTTCACGCAG +
Preference number: 4 (lower is better)
Translates to: QHQVIQKRRGWLSAQRKSCAKAQ*SPFFTQ
Trigger: CTGCGTGAAGAATGGGCTGCACTGTGCCTTCGCGCA...GCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTAGGTCCAGGGGGCCGTaGGCGAAGGCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSRSRGP*AKAQCS
Trigger: GCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCT...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp TGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTCAGCTCAGCTCCGTTTaGACTTGCACTCGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CPHFQPWQRCQPFFGLPTQLSSV*TCTRRG
Trigger: TCCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTG...AGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACCGGTCCTCACGTCGGTaGCACCAGAAGCGAGTGACG +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHRSSRR*HQKRVT
Trigger: CGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITADPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAAGGTGGTCACGGGTGCTaGGGAGGCAACCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWEGGHGC*GGNHSP
Trigger: GGGAGAGTGGTTGCCTCCCCAGCACCCGTGACCACC...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGGCTATTAAAAGTCTTTaGCAAAGCCACGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: VLTSVAPEASDDMSVVRRAIKSL*QSHGRG
Trigger: TCCCCGACCGTGGCTTTGCCAAAGACTTTTAATAGC...CCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCCATCCCTGAGGCCATaGCCACCAAGACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECPSLRP*PPRQVR
Trigger: CCTCACCTGTCTTGGTGGCCATGGCCTCAGGGATGG...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCTATTGTGGTAGTGTaGGCACGCATAGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSAAIVVV*ARIALA
Trigger: CGCCAGGGCTATGCGTGCCCACACTACCACAATAGC...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTACTCCTGACCTTAGGTaGTCCACCCGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECTPDLR*STRLPK
Trigger: CTTTGGGAGGCGGGTGGATCACCTAAGGTCAGGAGT...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACATCCCAGTTCACTGCCTaGCCCCTGCCAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTSQFTA*PLPGRP
Trigger: TGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGA...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp ACTGACAACCGGGAGATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGAGCTCAGCTGCTCCTaGCCACTGACAACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: TDNREMSRQTPLIPEKTRELSCS*PLTTGR
Trigger: TCTCCCGGTTGTCAGTGGTCAGGAGCAGCTGAGCTC...TCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATCTCCCGGTTGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCAGCTCCGTTTGGACTTaGACTCGAAGAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSASSVWT*TRRGWG
Trigger: CCCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCT...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACAGGGTGGTCACGGGTaGTGGGGAGGCAACCACTCT +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWEQGGHG*WGGNHS
Trigger: AGAGTGGTTGCCTCCCCAGCACCCGTGACCACCCTG...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCAACCCTGGCAGCGCTaGCAGCCATTCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQQPWQR*QPFFGL
Trigger: AAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTG...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATGAAAACAGGGGGCACTaGTCCGTCCTGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDENRGH*SVLNSF
Trigger: GAAGGAGTTCAGGACGGAGCAGTGCCCCCTGTTTTC...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp GGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTCAGGTGAACGGCCGGTaGTGCGCGCACTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLQSALKDPSSQWPSHSSQVNGR*CAHLCC
Trigger: ACAGCACAAGTGCGCGCAGCACCGGCCGTTCACCTG...ACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp GCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACAACGCAGGTGGTACTTaGGTTCTGTGTCCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: AEQGLLTTVTHVVTPLYHNAGGT*VLCPPS
Trigger: CGACGGGGGACACAGAACGCAAGTACCACCTGCGTT...GTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACCAGCTCAGCTCCGTTTaGACTTGCACTCGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDQLSSV*TCTRRG
Trigger: TCCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTG...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp GGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGCTTCGGCAGGGGAATaGTGCCGATGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GLQSALKDPSSQWPSHSSASAGE*CRCPHS
Trigger: GCTGTGGGGACATCGGCACCATTCCCCTGCCGAAGC...ACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSRPHTA*RGAGRS
Trigger: TGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCT...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATTGGCTTCGTTGTACTTaGAGCAGTACACGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDWLRCT*SSTRRG
Trigger: GCCCCGACGTGTACTGCTCCAAGTACAACGAAGCCA...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACCAATCATGGCCTGGCTaGCCAAGACCCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHQSWPG*PRPQAA
Trigger: TGCAGCCTGGGGTCTTGGCCAGCCAGGCCATGATTG...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCATAGGTGACAACGTGTaGCAGGAAAGGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSAIGDNV*QERLSG
Trigger: GCCTGACAGCCTTTCCTGTCACACGTTGTCACCTAT...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGATAGGTGACAACGTGTaGCAGGAAAGGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITAIGDNV*QERLSG
Trigger: GCCTGACAGCCTTTCCTGTCACACGTTGTCACCTAT...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR TCA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACACTCCTGACCTTAGGTaGTCCACCCGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHTPDLR*STRLPK
Trigger: CTTTGGGAGGCGGGTGGATCACCTAAGGTCAGGAGT...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR TCA 90 bp ACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCTGCCTAGGACAGCTCTaGGTAATCAGAAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: TPARTPSDISKELQSTIACLGQL*VIRKQL
Trigger: AAGCTGTTTTCTGATTACTCAGAGCTGTCCTAGGCA...GGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACTGTGCTCCAGGCCACTaGGAGGCTGTGGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYCAPGH*EAVAGS
Trigger: GGACCCGGCCACAGCCTCTCAGTGGCCTGGAGCACA...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CGGCGAATGTCGAACACTAGAGTTACAGACGACAGGCAACAAGAACATGCAGAGGCTGCTCCTGACCACTaGCAACCGGGAGATGTCTCG +
Preference number: 4 (lower is better)
Translates to: RRMSNTRVTDDRQQEHAEAAPDH*QPGDVS
Trigger: CGAGACATCTCCCGGTTGTCAGTGGTCAGGAGCAGC...CTCTGCATGTTCTTGTTGCCTGTCGTCTGTAACTCTAGTGTTCGACATTCGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp TCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGCAGTTACACACGTCGTaGCACCACTGTATCACGGCG +
Preference number: 4 (lower is better)
Translates to: SADHSYTRRDTTVSRRMSQLHTS*HHCITA
Trigger: CGCCGTGATACAGTGGTGTCACGACGTGTGTAACTG...CGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GTGGCCCGCGGAGAGCCAGGTCGCCGTAAACCACAGATGCCTGTTCCTGCTCAATTCACATTGCTAAGATaGAGGTCTAACGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: VARGEPGRRKPQMPVPAQFTLLR*RSNAEP
Trigger: AGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAA...TTGAGCAGGAACAGGCATCTGTGGTTTACGGCGACCTGGCTCTCCGCGGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR GCA 90 bp GTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCATTCACATTGCTAAGATaGAGGTCTAACGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: VRTTNCCDHSAAWIPEAPFTLLR*RSNAEP
Trigger: AGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAA...TGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCAAACAAAGTCCCAGATaGTCCCGGGGACACCGTTCA +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTKQSPR*SRGHRS
Trigger: TGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTT...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGAAACAAAGTCCCAGATaGTCCCGGGGACACCGTTCA +
Preference number: 4 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQKQSPR*SRGHRS
Trigger: TGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTT...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR GCA 90 bp ACTGACAACCGGGAGATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGACACGGACCACAGAAATaGAGGACGGAGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TDNREMSRQTPLIPEKTRHGPQK*RTELSC
Trigger: GCAGGAGAGCTCCGTCCTGCATTTCTGTGGTCCGTG...TCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATCTCCCGGTTGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACAGCCCCAGGATCTTaGCCCCATTTCCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: DVSADTTYPRKDQRLQMGTAPGS*PHFQPW
Trigger: CCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTGT...TCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACAGGCAACAAGAACATaGAGAGCCGGCCGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWEQATRT*RAGRQP
Trigger: TGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCGAGCAGCAGGTCATGTaGTTTGCCACCACAGATAGG +
Preference number: 4 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTEQQVM*FATTDR
Trigger: CCTATCTGTGGTGGCAAACCACATGACCTGCTGCTC...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CCA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCAGCTCAGCTCCGTTTaGACTTGCACTCGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDQLSSV*TCTRRG
Trigger: TCCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTG...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACATGCTTGGCGCGGAGCTaGAAGATCACGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTCLARS*KITPST
Trigger: GGTGGACGGCGTGATCTTCCAGCTCCGCGCCAAGCA...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACCGGGCTGGAGTGCGGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYRAGVR*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCCG...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTTGCTCCGTGCGGGAGTaGCAATACTGGCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSCSVRE*QYWQPS
Trigger: CGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCA...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGGGCAGTACCCGGTTTaGCGCATGTCGTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSAGQYPV*RMSLHF
Trigger: AAAATGCAACGACATGCGCCAAACCGGGTACTGCCC...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR TCA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp GATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGACAGTTACACACGTCGTaGCACCACTGTATCACGGCG +
Preference number: 4 (lower is better)
Translates to: DVSADTTYPRKDQRLQMGQLHTS*HHCITA
Trigger: CGCCGTGATACAGTGGTGTCACGACGTGTGTAACTG...TCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGGCTGGGGGAGAAGCTaGCGGAAACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GLQSALKDPSSQWPSHSSGWGRS*RKQSPR
Trigger: TCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC...ACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp ACTGACAACCGGGAGATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAAGCTCCGTTTGGACTTaGACTCGAAGAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TDNREMSRQTPLIPEKTRSSVWT*TRRGWG
Trigger: CCCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCT...TCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACATCTCCCGGTTGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACTCTCAGTCACGTTTCTaGTGCGGCCGAAACCACACT +
Preference number: 4 (lower is better)
Translates to: AEQGLLTTVTHVVTPLYHSQSRF*CGRNHT
Trigger: AGTGTGGTTTCGGCCGCAGCAGAAACGTGACTGAGA...GTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGCCGTAAACCACAGATaGCTGTTCCTGCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: AEQGLLTTVTHVVTPLYHAVNHR*LFLLNS
Trigger: GGAGTTGAGCAGGAACAGGCATCTGTGGTTTACGGC...GTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCAGGCAACAAGAACATaGAGAGCCGGCCGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSQATRT*RAGRQP
Trigger: TGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTTTCTGCTTGCTGTCTTaGTCGCTGCCCCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLQSALKDPSSQWPSHSSFCLLS*SLPLGP
Trigger: TGGCCCTAGGGGCAGCGAGCAAGACAGCAAGCAGAA...ACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp CGGCGAATGTCGAACACTAGAGTTACAGACGACAGGCAACAAGAACATGCAGAGGACCCCAGCTCCCAGTaGCCTAGTCACAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: RRMSNTRVTDDRQQEHAEDPSSQ*PSHSSV
Trigger: GACACTACTGTGACTAGGCCACTGGGAGCTGGGGTC...CTCTGCATGTTCTTGTTGCCTGTCGTCTGTAACTCTAGTGTTCGACATTCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAAAGCTCCGATGATAACTaGCAGCGCGGGTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWESSDDN*QRGSGD
Trigger: GTCACCTGACCCGCGCTGCCAGTTATCATCGGAGCT...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACCCTAGGAGCCATCCCTaGGGCCATGGCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYPRSHP*GHGHQD
Trigger: GTCTTGGTGGCCATGGCCTCAGGGATGGCTCCTAGG...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACGGAACAAGGTCTGCTaGCCACAGTTACACACGTCG +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWERNKVC*PQLHTS
Trigger: CGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCG...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTGGCTGGGGGAGAAGCTaGCGGAAACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSGWGRS*RKQSPR
Trigger: TCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR GCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACAGTCACGTTTCTGCTaGGGCCGAAACCACACTGTC +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWEQSRFC*GRNHTV
Trigger: GACAGTGTGGTTTCGGCCGCAGCAGAAACGTGACTG...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTTGCTGCGCGCACTTGTaGTGTGAAAACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSCCAHL*CENRGH
Trigger: GTGCCCCCTGTTTTCACAGCACAAGTGCGCGCAGCA...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR GCA 90 bp ATGTCTCGGCAGACACCACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAAGCTCCGTCTTGTAGCTaGCCAGCACGAAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: MSRQTPLIPEKTRGSKWEAPSCS*PARSWH
Trigger: ATGCCAACTTCGTGCTGGGCAGCTACAAGACGGAGC...TTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTGGTGTCTGCCGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CCA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGGCTATTAAAAGTCTTTaGCAAAGCCACGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PSGLVTVVSGPQTAVITAAIKSL*QSHGRG
Trigger: TCCCCGACCGTGGCTTTGCCAAAGACTTTTAATAGC...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTTTACTCTCCCCGCCGCCCAGCTaGCCGTTCTGCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KSQTLICGLFYSRSGPLLSPPPS*PFCKAS
Trigger: GGAAGCCTTGCAGAACGGCCAGCTGGGCGGCGGGGA...GAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR TCA 90 bp CAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCTGCCTAGGACAGCTCTaGGTAATCAGAAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: QWPSHSSVRTTNCCDHSACLGQL*VIRKQL
Trigger: AAGCTGTTTTCTGATTACTCAGAGCTGTCCTAGGCA...GGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACGGCTGGGGGAGAAGCTaGCGGAAACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYGWGRS*RKQSPR
Trigger: TCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR GCA 90 bp GGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTTTCACATTGCTAAGATaGAGGTCTAACGCAGAACCG +
Preference number: 4 (lower is better)
Translates to: GLLTTVTHVVTPLYHGECFTLLR*RSNAEP
Trigger: CGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAA...ACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR GCA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCTTCACATTGCTAAGATaGAGGTCTAACGCAGAACCG +
Preference number: 4 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSFTLLR*RSNAEP
Trigger: CGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAA...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACAGCTCCGATGATAACTaGCAGCGCGGGTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYSSDDN*QRGSGD
Trigger: GTCACCTGACCCGCGCTGCCAGTTATCATCGGAGCT...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACTTCTCAATCATGGCCTaGCTGGCCAAGACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYFSIMA*LAKTPG
Trigger: GCCTGGGGTCTTGGCCAGCCAGGCCATGATTGAGAA...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR TCA 90 bp CGGCGAATGTCGAACACTAGAGTTACAGACGACAGGCAACAAGAACATGCAGAGGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RRMSNTRVTDDRQQEHAEVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...CTCTGCATGTTCTTGTTGCCTGTCGTCTGTAACTCTAGTGTTCGACATTCGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp ATGACAAAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTCGCGCACTTGTGCTGTaGAAACAGGGGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: MTKSQTLICGLFYSRSGPRALVL*KQGALL
Trigger: GAGCAGTGCCCCCTGTTTTCACAGCACAAGTGCGCG...AGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp AAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTTTACTCCACGCAGTGGCCACGTaGGTCTGTCTCGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: KSQTLICGLFYSRSGPLLHAVAT*VCLVDA
Trigger: TGCATCCACGAGACAGACGCACGTGGCCACTGCGTG...GAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR GCA 90 bp ATGACAAAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTCAAAGGAAGCACAGGTaGTCTCCGGGGCATGCGAGG +
Preference number: 4 (lower is better)
Translates to: MTKSQTLICGLFYSRSGPQRKHR*SPGHAR
Trigger: CCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTG...AGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp TCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCTGGACACAGACAGGTCAGACACTAATTTGTaGTTTGTTCTACAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SKEARVALCSKEELDTDRSDTNL*FVLQPF
Trigger: GAACGGCTGTAGAACAAACCACAAATTAGTGTCTGA...CCTGTCTGTGTCCAGCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR TCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACATAGGTGACAACGTGTaGCAGGAAAGGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYIGDNV*QERLSG
Trigger: GCCTGACAGCCTTTCCTGTCACACGTTGTCACCTAT...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR TCA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSVGLDR*QRVTGK
Trigger: CTTTCCTGTCACACGTTGTCACCTATCTAGTCCTAC...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CCA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACCAGCTCAGCTCCGTTTaGACTTGCACTCGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYQLSSV*TCTRRG
Trigger: TCCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTG...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp TACACACGTCGTGACACCACTGTATCACGGCGAATGTCGAACACTAGAGTTACAGCTATTAAAAGTCTTTaGCAAAGCCACGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: YTRRDTTVSRRMSNTRVTAIKSL*QSHGRG
Trigger: TCCCCGACCGTGGCTTTGCCAAAGACTTTTAATAGC...TGTAACTCTAGTGTTCGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CCA 90 bp AAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTTTACTCTTCTCAATCATGGCCTaGCTGGCCAAGACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSQTLICGLFYSRSGPLLFSIMA*LAKTPG
Trigger: GCCTGGGGTCTTGGCCAGCCAGGCCATGATTGAGAA...GAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CCA 90 bp ATGACAAAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTGCTATTGTGGTAGTGTaGGCACGCATAGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: MTKSQTLICGLFYSRSGPAIVVV*ARIALA
Trigger: CGCCAGGGCTATGCGTGCCCACACTACCACAATAGC...AGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR CAA 72 bp CGGGCGATGACAAAATCTCAGACACTAATTTGTGGTTaGTTCTACAGCCGTTCAGGTCCTTTACTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RAMTKSQTLICG*FYSRSGPLLGS
Trigger: GCTTCCGAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCATCGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR TCA 90 bp AAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTTTACTCTGCTCAGAGGGAGACTaGACGTGGCATAACAACAAG +
Preference number: 4 (lower is better)
Translates to: KSQTLICGLFYSRSGPLLCSEGD*TWHNNK
Trigger: CTTGTTGTTATGCCACGTTCAGTCTCCCTCTGAGCA...GAGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
3UTR CAA 72 bp TCCATGACGGGCGATGACAAAATCTCAGACACTAATTaGTGGTTTGTTCTACAGCCGTTCAGGTCCTTTACT +
Preference number: 4 (lower is better)
Translates to: SMTGDDKISDTN*WFVLQPFRSFT
Trigger: AGTAAAGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCATCGCCCGTCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR TCA 90 bp GGCGATGACAAAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTTTATTTTCTTTCCATaGCGGGCGATGACAAAATCT +
Preference number: 4 (lower is better)
Translates to: GDDKISDTNLWFVLQPFRFIFFP*RAMTKS
Trigger: AGATTTTGTCATCGCCCGTCATGGAAAGAAAATAAA...CCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCATCGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS CCA 90 bp GCAGAGCCCAGTGTGCCCGGCTCTGAACGCAGGGGTGGCGGCTGCTaGGGAGGCGTCATGGCTGAGGAGCCCACCGGCCCTGGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: AEPSVPGSERRGGGC*GGVMAEEPTGPGRG
Trigger: GCCCCTCCCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACTGGGCTCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000674376.1
CDS-3UTR CAA 90 bp CTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGGCCGTGCGCGAAGGCACAGTGGAACCGCCGGGGGTaGCGCCGCCTGTCCCGGCTA +
Preference number: 5 (lower is better)
Translates to: LTSHTGGRRSRGPCAKAQWNRRG*RRLSRL
Trigger: TAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCCA...CTGTGCCTTCGCGCACGGCCCCCTGGACCTGCGGCCGCCCGTGTGTGACGTCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS GCA 90 bp GCTGCAGAGCCCAGTGTGCCCGGCTCTGAACGCAGGGGTGGCGGCTaGTGGGGAGGCGTCATGGCTGAGGAGCCCACCGGCCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: AAEPSVPGSERRGGG*WGGVMAEEPTGPGR
Trigger: CCTCCCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACTGGGCTCTGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000674376.1
CDS CCA 90 bp TGGGGAGGCGTCATGGCTGAGGAGCCCACCGGCCCTGGGAGGGGCTaGGACAGCGAACCGAGCGGCGAGGTGGACGCAGAGGATGGCGAG +
Preference number: 5 (lower is better)
Translates to: WGGVMAEEPTGPGRG*DSEPSGEVDAEDGE
Trigger: CTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTTCGCTGTCCCAGCCCCTCCCAGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000674376.1
CDS GCA 90 bp GGCCGCAGGACAGCACCGTGGGCCCGCTCCCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAGATCACCTGTGCCTCCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GRRTAPWARSRQATH*LARSWKITCASTSS
Trigger: GGAGGAGGTGGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGTCCTGCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397464.5
ENST00000508903.7
ENST00000674376.1
CDS CCA 90 bp GCGGCGAGGTGGACGCAGAGGATGGCGAGTGTAGCGATGGTGCTCTaGGCAGGGAGCCGGGGATGGCGACAGGTGCAGAGCCGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: AARWTQRMASVAMVL*AGSRGWRQVQSRPA
Trigger: CGCTGGCCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTACACTCGCCATCCTCTGCGTCCACCTCGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000515195.1
ENST00000674376.1
CDS CCA 90 bp CCACCGGCCCTGGGAGGGGCTGGGACAGCGAACCGAGCGGCGAGGTaGACGCAGAGGATGGCGAGTGTAGCGATGGTGCTCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PPALGGAGTANRAAR*TQRMASVAMVLWAG
Trigger: CCCTGCCCAGAGCACCATCGCTACACTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTTCGCTGTCCCAGCCCCTCCCAGGGCCGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000674376.1
CDS-3UTR CAA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATACACGGGCACGCTCCTaGGCCTCCTGCGCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHTRARS*ASCASR
Trigger: GCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGT...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS CCA 90 bp GCCAGGCTGGACGCCACGCTGGAGCTCACGCTGGGGGCCGGCGGGTaGACCGCTGCAAACACGGCCAGGTGGTTCTGCTTGCTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: ARLDATLELTLGAGG*TAANTARWFCLLSC
Trigger: GCAAGACAGCAAGCAGAACCACCTGGCCGTGTTTGCAGCGGTCCACCCGCCGGCCCCCAGCGTGAGCTCCAGCGTGGCGTCCAGCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp GCTGGGGAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAACGAGACCCGCACCTaGGCGGCGCACGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: AGEATTLPVHCLTPARTPNETRT*AAHGCH
Trigger: GTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGTT...GGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTCCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CAA 90 bp GCTTCCTGGGCCTGCAGCTCCCTGACGTCACACACGGGCGGCCGCAGGTCCAGGCGGTGCTGCGCGCACTaGTGCTGTAGTGGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: ASWACSSLTSHTGGRRSRRCCAH*CCSGSA
Trigger: AGCCGACCCACTACAGCACAAGTGCGCGCAGCACCG...CCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGGGAGCTGCAGGCCCAGGAAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS TCA 90 bp GCCAGGCTGCCTCAGCCCCGGGCGTTAGGAAACCACCGGCCCCGCTaGGTCACCGCGACACAGCCCGGCTCTGCCGTGACACAGCACATT +
Preference number: 5 (lower is better)
Translates to: ARLPQPRALGNHRPR*VTATQPGSAVTQHI
Trigger: AATGTGCTGTGTCACGGCAGAGCCGGGCTGTGTCGCGGTGACTCAGCGGGGCCGGTGGTTTCCTAACGCCCGGGGCTGAGGCAGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513783.1
ENST00000515195.1
CDS GCA 90 bp AGCTCCCTGACGTCACACACGGGCGGCCGCAGGTCCAGGGGGCCGTaGGCGAAGGCACAGTGCAGCCCATTCTTCACGCAGTGGCCACGT +
Preference number: 5 (lower is better)
Translates to: SSLTSHTGGRRSRGP*AKAQCSPFFTQWPR
Trigger: ACGTGGCCACTGCGTGAAGAATGGGCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCTGCGGCCGCCCGTGTGTGACGTCAGGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301712.5
ENST00000382757.9
ENST00000389221.9
ENST00000503648.1
ENST00000508903.7
CDS GCA 90 bp CGCGTGGGCCTCCATGGCACCTCCCACAGCCACTGTGCTTGGAGATaGCCTCCCCTCCCGGGGATGATGGTGCCACAAGGGCAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RVGLHGTSHSHCAWR*PPLPGMMVPQGQPS
Trigger: GGAGGGCTGCCCTTGTGGCACCATCATCCCCGGGAGGGGAGGGCATCTCCAAGCACAGTGGCTGTGGGAGGTGCCATGGAGGCCCACGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502438.6
CDS CCA 90 bp AGGATGGCGAGTGTAGCGATGGTGCTCTGGGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGGCCAGCGACCTGGGACCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RMASVAMVLWAGSRG*RQVQSRPATWDLLL
Trigger: GAGCAGCAGGTCCCAGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTACACTCGCCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000515195.1
ENST00000674376.1
CDS CCA 90 bp GGCGGTGGAGGAAGGTCCTGTGTGCACCCTGGGCAGGGCGACCCTTaGGTTGTTGGCCCTGGGACTCAGCCTAAGGACCCGGCGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GGGGRSCVHPGQGDP*VVGPGTQPKDPASQ
Trigger: CTGGGACGCCGGGTCCTTAGGCTGAGTCCCAGGGCCAACAACCCAAGGGTCGCCCTGCCCAGGGTGCACACAGGACCTTCCTCCACCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CAA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACACACGGGCACGCTCCTaGGCCTCCTGCGCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHTRARS*ASCASR
Trigger: GCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGT...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS GCA 90 bp TCCTGGACCCCACCAGGCTCAGGAAGAGGCGCTGACAGTGACACCTaGCCCGGCCGGTCTCCCCACCAGATCTACGCCTTCCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: SWTPPGSGRGADSDT*PGRSPHQIYAFLAT
Trigger: GGTGGCCAGGAAGGCGTAGATCTGGTGGGGAGACCGGCCGGGGCAGGTGTCACTGTCAGCGCCTCTTCCTGAGCCTGGTGGGGTCCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS-3UTR CAA 90 bp CACACACGGCCCGAGCATCTCCCACACGAGCAGGACCAGGGTGGTCACGGGTGCTGCCGGATCTTCCTCTaGGCCTCGTCCAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: HTRPEHLPHEQDQGGHGCCRIFL*ASSSCR
Trigger: GCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGCA...GCACCCGTGACCACCCTGGTCCTGCTCGTGTGGGAGATGCTCGGGCCGTGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp ACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCTCAACACGGGCACGCTCCTaGGCCTCCTGCGCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: TNCCDHSAAWIPEAPGPSTRARS*ASCASR
Trigger: GCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGT...TGAGGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp GACTGCCACATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCGGTGCTGCGCGCACTaGTGCTGTGAAAACAGGGGG +
Preference number: 5 (lower is better)
Translates to: DCHIHPAPRTLAHTRPEHRCCAH*CCENRG
Trigger: CCCCCTGTTTTCACAGCACAAGTGCGCGCAGCACCG...ATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTATGTGGCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CAA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGATGGAACCGCCGGGGGTaGCGCCGCCTGTCCCGGCTA +
Preference number: 5 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGWNRRG*RRLSRL
Trigger: TAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCCA...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS GCA 90 bp CCGGCAGGCCACACACTGCTTGGCGCGGAGCTGGAAGATCACCTGTaGCTCCACCTCCTCCTTCTTCTGCAGCGCCAGCTGCCGGTCGCT +
Preference number: 5 (lower is better)
Translates to: PAGHTLLGAELEDHL*LHLLLLLQRQLPVA
Trigger: AGCGACCGGCAGCTGGCGCTGCAGAAGAAGGAGGAGGTGGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397464.5
ENST00000508903.7
ENST00000674376.1
CDS CCA 90 bp AGGATGGCGAGTGTAGCGATGGTGCTCTGGGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGGCCAGCGACCTGGGACCTCACTGTT +
Preference number: 5 (lower is better)
Translates to: RMASVAMVLWAGSRG*RQVQSRPATWDLTV
Trigger: AACAGTGAGGTCCCAGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTACACTCGCCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513783.1
CDS-3UTR CAA 90 bp CCGGGGGTTGCGCCGCCTGTCCCGGCTATTGTGGTAGTGTGGGCACGCATAGCCCACGAAGTTGGCATCTaGCCACCGGGGGTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: PGVAPPVPAIVVVWARIAHEVGI*PPGVLA
Trigger: AGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGTG...GGCTATGCGTGCCCACACTACCACAATAGCCGGGACAGGCGGCGCAACCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CAA 90 bp GAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACCTGCCCAGCACGAAGTaGGCATCTTGCCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: EATTLPVHCLTPARTPSDLPSTK*ASCHRG
Trigger: CCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCAG...GTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CAA 90 bp TTCCCAAAGGAAGCACAGGTGCTCTCCGGGGCATGCGAGGCAGCACCAGGTCATTGGAACCGCCGGGGGTaGCGCCGCCTGTCCCGGCTA +
Preference number: 5 (lower is better)
Translates to: FPKEAQVLSGACEAAPGHWNRRG*RRLSRL
Trigger: TAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCCA...ATGACCTGGTGCTGCCTCGCATGCCCCGGAGAGCACCTGTGCTTCCTTTGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS CCA 90 bp GGGAAGGCGCCTGGGCCCAAATCCCACTCGGCACCCACCCCCTGTTaGGGAGGGCTTGGTATTGGACTCCACGAGCCTCGGTTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: GKAPGPKSHSAPTPC*GGLGIGLHEPRFPH
Trigger: ATGGGGAAACCGAGGCTCGTGGAGTCCAATACCAAGCCCTCCCCAACAGGGGGTGGGTGCCGAGTGGGATTTGGGCCCAGGCGCCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503648.1
CDS-3UTR CAA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAAACGAGACCCGCACCTaGGCGGCGCACGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEANETRT*AAHGCH
Trigger: GTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGTT...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAACACGGGCACGCTCCTaGGCCTCCTGCGCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEATRARS*ASCASR
Trigger: GCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGT...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp GCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCCAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: APSLALRGAGAQKQRPRTQATHC*ARSWKI
Trigger: GATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTG...GGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp GAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACCAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: EATTLPVHCLTPARTPSDQATHC*ARSWKI
Trigger: GATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTG...GTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCATGATGCTCCTTCACTaGCTCTCCGAGGCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: QATRTCRAGRQPAPTPRAMMLLH*LSEAQA
Trigger: CGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCAT...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp ATACACCCGGCACCCCGGACCCTGGCGCACACACGGCCCGAGCATCTCCCACACGCTGCCAGCCATTCTTaGGTCTTCCCACTGCTCACC +
Preference number: 5 (lower is better)
Translates to: IHPAPRTLAHTRPEHLPHAASHS*VFPLLT
Trigger: GGTGAGCAGTGGGAAGACCAAAGAATGGCTGGCAGC...GTGTGGGAGATGCTCGGGCCGTGTGTGCGCCAGGGTCCGGGGTGCCGGGTGTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp GCTGCTCCGTGCGGGAGTGGCAATACTGGCAGCCGTCGCCGCCATCGCAGCGTGGTGGCTTCGTTGTACTaGGAGCAGTACACGTCGGGG +
Preference number: 5 (lower is better)
Translates to: AAPCGSGNTGSRRRHRSVVASLY*EQYTSG
Trigger: CCCCGACGTGTACTGCTCCAAGTACAACGAAGCCAC...CACGCTGCGATGGCGGCGACGGCTGCCAGTATTGCCACTCCCGCACGGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS TCA 90 bp GCTTGGCATTTCCCGGCTGGCCGCTGCCCGTGGAGGAAGGACTCGTaGGGTGGAGGTCGTGACAGCCCCATTCATTCACCATCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: AWHFPAGRCPWRKDS*GGGRDSPIHSPSPG
Trigger: GCCTGGGGATGGTGAATGAATGGGGCTGTCACGACCTCCACCTCACGAGTCCTTCCTCCACGGGCAGCGGCCAGCCGGGAAATGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS GCA 90 bp TTCAAACCTGAGTGTGAAACGGTCGATGACGGCCCAGCCCTGCTGTaGTCGCGGCCTGGTGGGATTGGTGGGTGCTATGCCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: FKPECETVDDGPALL*SRPGGIGGCYAPGP
Trigger: GGGGCCTGGGGCATAGCACCCACCAATCCCACCAGGCCGCGAGCACAGCAGGGCTGGGCCGTCATCGACCGTTTCACACTCAGGTTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS-3UTR CAA 90 bp TGCTGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACCCAGCTCAGCTCCGTTaGGACTTGCACTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: CCGRNHTVAPGADGTGDHPAQLR*DLHSKR
Trigger: CCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTGG...GTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAATGCCGGATCTTCCTCTaGGCCTCGTCCAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQCRIFL*ASSSCR
Trigger: GCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGCA...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACCAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDQATHC*ARSWKI
Trigger: GATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTG...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCATGATGCTCCTTCACTaGCTCTCCGAGGCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPMMLLH*LSEAQA
Trigger: CGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCAT...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp CAGGCAACAAGAACATGCAGAGCCGGCCGCCAGCCAGCTCCTACGCCCCGTGCCACGCCGGTGGCTTCGTaGTACTTGGAGCAGTACACG +
Preference number: 5 (lower is better)
Translates to: QATRTCRAGRQPAPTPRATPVAS*YLEQYT
Trigger: CGTGTACTGCTCCAAGTACAACGAAGCCACCGGCGT...GGCACGGGGCGTAGGAGCTGGCTGGCGGCCGGCTCTGCATGTTCTTGTTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CAA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGCACGAAGTTGGCATCTaGCCACCGGGGGTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: APEASDDMSVVRRSAGARHEVGI*PPGVLA
Trigger: AGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGTG...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp GGCCAGGCACAACCAGAAGGCCGGGCTGGAGCAAGGAGGAGAAAGGGGCTTCAGGCGACCCTTGGGTTGTaGGCCCTGGGACTCAGCCTA +
Preference number: 5 (lower is better)
Translates to: GQAQPEGRAGARRRKGLQATLGL*ALGLSL
Trigger: TAGGCTGAGTCCCAGGGCCAACAACCCAAGGGTCGC...CTGAAGCCCCTTTCTCCTCCTTGCTCCAGCCCGGCCTTCTGGTTGTGCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CAA 90 bp GGAGAAAGGGGCTTCAGAGGCAAGCAGGCTGCGAGGTGCCAAACCCACAAGCCATGGGCAGGGCGACCCTaGGGTTGTTGGCCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GERGFRGKQAARCQTHKPWAGRP*GCWPWD
Trigger: GTCCCAGGGCCAACAACCCAAGGGTCGCCCTGCCCA...TGGCTTGTGGGTTTGGCACCTCGCAGCCTGCTTGCCTCTGAAGCCCCTTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS GCA 90 bp CACCGTTCAAACCTGAGTGTGAAACGGTCGATGACGGCCCAGCCCTaGTGTGCTCGCGGCCTGGTGGGATTGGTGGGTGCTATGCCCCAG +
Preference number: 5 (lower is better)
Translates to: HRSNLSVKRSMTAQP*CARGLVGLVGAMPQ
Trigger: CTGGGGCATAGCACCCACCAATCCCACCAGGCCGCGAGCACAGCAGGGCTGGGCCGTCATCGACCGTTTCACACTCAGGTTTGAACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS-3UTR CAA 90 bp ACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACCAGGCCCCCAGCTCCGTTTGGACTaGCACTCGAAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: TTNCCDHSAAWIPEAPGPQLRLD*HSKRMG
Trigger: CCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCTG...GGGGCCTGGTGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp AGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGCCAGCTCAGCTCCGTTaGGACTTGCACTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SDDMSVVRRSAGARVPSRPAQLR*DLHSKR
Trigger: CCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTGG...CCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp CAGCCCCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTCAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: QPQDLAPISNPGSAASHSQATHC*ARSWKI
Trigger: GATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTG...AGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCACAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSQATHC*ARSWKI
Trigger: GATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTG...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp CCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAATGATGCTCCTTCACTaGCTCTCCGAGGCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: PSLALRGAGAQKQRPRTTMMLLH*LSEAQA
Trigger: CGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCAT...TGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCATGATGCTCCTTCACTaGCTCTCCGAGGCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVMMLLH*LSEAQA
Trigger: CGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCAT...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp GTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGGTGCCCAGCAGGAGTGGCTTCGTTGTACTaGGAGCAGTACACGTCGGGG +
Preference number: 5 (lower is better)
Translates to: VTTCPWSGGALEPGCPAGVASLY*EQYTSG
Trigger: CCCCGACGTGTACTGCTCCAAGTACAACGAAGCCAC...TCCTGCTGGGCACCCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp CACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACATCTCCAACACGAAGTTGGCATCTaGCCACCGGGGGTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: HSPSSLPDPCQDAQRHLQHEVGI*PPGVLA
Trigger: AGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGTG...TTGGAGATGTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CAA 90 bp TCAACGTGTGCAAAGGCACAGAAGGGGCCGCGCGGGCAGTACCCGGTTTGGCGCCGGGCAGTACCCGGTTaGGCGCATGTCGTTGCATTT +
Preference number: 5 (lower is better)
Translates to: STCAKAQKGPRGQYPVWRRAVPG*AHVVAF
Trigger: AAATGCAACGACATGCGCCAAACCGGGTACTGCCCG...GCGCCAAACCGGGTACTGCCCGCGCGGCCCCTTCTGTGCCTTTGCACACGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CAA 90 bp CCTGCTCCCACGCCACGAGGCTGGAACATCAGCCCCAGTGCCTGGTGCACACACCGGGCAGTACCCGGTTaGGCGCATGTCGTTGCATTT +
Preference number: 5 (lower is better)
Translates to: PAPTPRGWNISPSAWCTHRAVPG*AHVVAF
Trigger: AAATGCAACGACATGCGCCAAACCGGGTACTGCCCG...GTGTGTGCACCAGGCACTGGGGCTGATGTTCCAGCCTCGTGGCGTGGGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CAA 90 bp GTGGCCCGCGGAGAGCCAGGTCGCCGTAAACCACAGATGCCTGTTCCTGCTCAAGCCAGGTGGTTCTGCTaGCTGTCTTGCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VARGEPGRRKPQMPVPAQARWFC*LSCSLP
Trigger: GGGCAGCGAGCAAGACAGCAAGCAGAACCACCTGGC...TTGAGCAGGAACAGGCATCTGTGGTTTACGGCGACCTGGCTCTCCGCGGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS TCA 90 bp CAGGTCATGTGGTTTGCCACCACAGATAGGGCACAAGGTTCCGTGTaGGGCCCCTCAGTCAGGACGGCATCTGGGAGGGAGCCCCACGGA +
Preference number: 5 (lower is better)
Translates to: QVMWFATTDRAQGSV*GPSVRTASGREPHG
Trigger: TCCGTGGGGCTCCCTCCCAGATGCCGTCCTGACTGAGGGGCCTCACACGGAACCTTGTGCCCTATCTGTGGTGGCAAACCACATGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CAA 90 bp CCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATAACGAGACCCGCACCTaGGCGGCGCACGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: PSSQWPSHSSVRTTNCCDNETRT*AAHGCH
Trigger: GTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGTT...ATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp AAAACCCATGATGCTCCTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGAACGAGACCCGCACCTaGGCGGCGCACGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: KTHDAPSLALRGAGAQKQNETRT*AAHGCH
Trigger: GTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGTT...CTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCATGGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp AACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGCAGCTCCGTTTGGACTaGCACTCGAAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: NRKGSQPRSSRRWHQKRVQLRLD*HSKRMG
Trigger: CCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCTG...CACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp GCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGAGCCAGGCCAGCTCAGCTCCGTTaGGACTTGCACTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: APEASDDMSVVRRSAGARPAQLR*DLHSKR
Trigger: CCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTGG...CCTGGCTCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp CTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACCCAGCTCAGCTCCGTTaGGACTTGCACTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LRGAGAQKQRPRTTEMQDPAQLR*DLHSKR
Trigger: CCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTGG...GTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGTGCCGGATCTTCCTCTaGGCCTCGTCCAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRCRIFL*ASSSCR
Trigger: GCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGCA...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGGTTCTGCTTGCTGTCTaGCTCGCTGCCCCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQVLLAV*LAAPRA
Trigger: GGCCCTAGGGGCAGCGAGCAAGACAGCAAGCAGAAC...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp CAGCCCCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTCAGCTCCGTTTGGACTaGCACTCGAAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: QPQDLAPISNPGSAASHSQLRLD*HSKRMG
Trigger: CCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCTG...AGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp TCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGAGGAGCGCTGGACCAGCTCAGCTCCGTTaGGACTTGCACTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SVAPEASDDMSVVRRSAGPAQLR*DLHSKR
Trigger: CCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTGG...TCCAGCGCTCCTCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCACACGGGCACGCTCCTaGGCCTCCTGCGCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSTRARS*ASCASR
Trigger: GCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGT...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp ACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGCAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: TVVSGPQTAVITAPRGSRQATHC*ARSWKI
Trigger: GATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTG...CCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp TGCGGCCGAAACCACACTGTCGCTCCAGGGGCAGACGGGACAGGGGACCACAGCGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: CGRNHTVAPGADGTGDHSGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...GCTGTGGTCCCCTGTCCCGTCTGCCCCTGGAGCGACAGTGTGGTTTCGGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCACTGCCACAGCCCCAGGATCTaGCCCCCATTTCCAACCCTG +
Preference number: 5 (lower is better)
Translates to: PPFPTLAALPAILWSSHCHSPRI*PPFPTL
Trigger: CAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTGTG...GCAGTGGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CAGCCCCAGGATCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTGTGGCTTCGTTGTACTaGGAGCAGTACACGTCGGGG +
Preference number: 5 (lower is better)
Translates to: QPQDLAPISNPGSAASHSVASLY*EQYTSG
Trigger: CCCCGACGTGTACTGCTCCAAGTACAACGAAGCCAC...AGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389221.9
CDS-3UTR CAA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACAGCTCCGTTTGGACTaGCACTCGAAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAQLRLD*HSKRMG
Trigger: CCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCTG...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp TCTTGCCCCCATTTCCAACCCTGGCAGCGCTGCCAGCCATTCTTTGGTCTTCCCCACAGCCCCAGGATCTaGCCCCCATTTCCAACCCTG +
Preference number: 5 (lower is better)
Translates to: SCPHFQPWQRCQPFFGLPHSPRI*PPFPTL
Trigger: CAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTGTG...GGGAAGACCAAAGAATGGCTGGCAGCGCTGCCAGGGTTGGAAATGGGGGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp GAGGCAACCACTCTCCCAGTTCACTGCCTGACCCCTGCCAGGACGCCCAGCGACCAGAAATTAATCCACTaGAGGCGTCCACGCGGAACA +
Preference number: 5 (lower is better)
Translates to: EATTLPVHCLTPARTPSDQKLIH*RRPRGT
Trigger: TGTTCCGCGTGGACGCCTCAAGTGGATTAATTTCTG...GTCGCTGGGCGTCCTGGCAGGGGTCAGGCAGTGAACTGGGAGAGTGGTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CAGAAGGGGCCGCGCGGGCAGTACCCGGTTTGGCGCATGTCGTTGCATTTTGTAACGCCGGTGGCTTCGTaGTACTTGGAGCAGTACACG +
Preference number: 5 (lower is better)
Translates to: QKGPRGQYPVWRMSLHFVTPVAS*YLEQYT
Trigger: CGTGTACTGCTCCAAGTACAACGAAGCCACCGGCGT...TACAAAATGCAACGACATGCGCCAAACCGGGTACTGCCCGCGCGGCCCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CAA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGACGCCGGTGGCTTCGTaGTACTTGGAGCAGTACACG +
Preference number: 5 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQTPVAS*YLEQYT
Trigger: CGTGTACTGCTCCAAGTACAACGAAGCCACCGGCGT...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp GCCGTTCAGGTCCTTTACTCGGAAGCTGCTCAGAGGGAGACTGAACGTGGCATACTGCCCAGCACGAAGTaGGCATCTTGCCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: AVQVLYSEAAQRETERGILPSTK*ASCHRG
Trigger: CCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCAG...TATGCCACGTTCAGTCTCCCTCTGAGCAGCTTCCGAGTAAAGGACCTGAACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CAA 90 bp CACGAAGTTGGCATCTTGCCACCGGGGGTCCTCGCTCAGGATCTTCTCAATCATCTGCCCAGCACGAAGTaGGCATCTTGCCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: HEVGILPPGVLAQDLLNHLPSTK*ASCHRG
Trigger: CCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCAG...ATGATTGAGAAGATCCTGAGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382757.9
CDS-3UTR CAA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCACGGGCAGTACCCGGTTaGGCGCATGTCGTTGCATTT +
Preference number: 5 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEARAVPG*AHVVAF
Trigger: AAATGCAACGACATGCGCCAAACCGGGTACTGCCCG...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGGCCAGGTGGTTCTGCTaGCTGTCTTGCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAAARWFC*LSCSLP
Trigger: GGGCAGCGAGCAAGACAGCAAGCAGAACCACCTGGC...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS GCA 90 bp CCGGCCAGCGACCTGGGACCTGCTGCTCCCAGGTCGTGGCCGTCTTaGTCTTCCAGGTCCTTCTCTAGGGATGCAATATTCACATTGCTA +
Preference number: 5 (lower is better)
Translates to: PASDLGPAAPRSWPS*SSRSFSRDAIFTLL
Trigger: TAGCAATGTGAATATTGCATCCCTAGAGAAGGACCTGGAAGAGCAAGACGGCCACGACCTGGGAGCAGCAGGTCCCAGGTCGCTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000515195.1
ENST00000674376.1
CDS-3UTR CAA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCTGCCGGATCTTCCTCTaGGCCTCGTCCAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSCRIFL*ASSSCR
Trigger: GCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGCA...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp TCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGAAATGCAGGACGGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SEAQAHRNSGHGPQKCRTGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...CGTCCTGCATTTCTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACATGATGCTCCTTCACTaGCTCTCCGAGGCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDMMLLH*LSEAQA
Trigger: CGCCTGCGCCTCGGAGAGCAAGTGAAGGAGCATCAT...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACCACAGCCCCAGGATCTaGCCCCCATTTCCAACCCTG +
Preference number: 5 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDHSPRI*PPFPTL
Trigger: CAGGGTTGGAAATGGGGGCAAGATCCTGGGGCTGTG...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS TCA 90 bp TGTCACGGACCCACTTCCTTGAAACCGTCGGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAGGCTGTCAGGCCAAGCGCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: CHGPTSLKPSVGLDR*QRVTGKAVRPSAGG
Trigger: CCCGCCTGCGCTTGGCCTGACAGCCTTTCCTGTCACACGTTGTCACCTATCTAGTCCTACCGACGGTTTCAAGGAAGTGGGTCCGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562537.1
CDS-3UTR CAA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACCAGCTCCGTTTGGACTaGCACTCGAAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDQLRLD*HSKRMG
Trigger: CCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCTG...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PRSSRRWHQKRVTTCPWSGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...TGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp TACTCGGAAGCTGCTCAGAGGGAGACTGAACGTGGCATAACAACAAGGAGTGGGCACGAAGTTGGCATCTaGCCACCGGGGGTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: YSEAAQRETERGITTRSGHEVGI*PPGVLA
Trigger: AGCGAGGACCCCCGGTGGCAAGATGCCAACTTCGTG...CCCACTCCTTGTTGTTATGCCACGTTCAGTCTCCCTCTGAGCAGCTTCCGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CAA 90 bp CCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCAGCTCAGCTCCGTTaGGACTTGCACTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PSGLVTVVSGPQTAVITAPAQLR*DLHSKR
Trigger: CCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTGG...CGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp AGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTGGATCCCGGAGGCAGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SVRTTNCCDHSAAWIPEAGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...TGCCTCCGGGATCCACGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp ACCCCTGCCAGGACGCCCAGCGACATCTCCAAGGAGCTACAAAGCACCATTGCCCAGAAATTAATCCACTaGAGGCGTCCACGCGGAACA +
Preference number: 5 (lower is better)
Translates to: TPARTPSDISKELQSTIAQKLIH*RRPRGT
Trigger: TGTTCCGCGTGGACGCCTCAAGTGGATTAATTTCTG...GGCAATGGTGCTTTGTAGCTCCTTGGAGATGTCGCTGGGCGTCCTGGCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp CAGCACCAGGTCATTCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCGTGGCTTCGTTGTACTaGGAGCAGTACACGTCGGGG +
Preference number: 5 (lower is better)
Translates to: QHQVIQKRRGWLSAQRKSVASLY*EQYTSG
Trigger: CCCCGACGTGTACTGCTCCAAGTACAACGAAGCCAC...GCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CAA 90 bp GGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTCTGCCCAGCACGAAGTaGGCATCTTGCCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: GLQSALKDPSSQWPSHSSLPSTK*ASCHRG
Trigger: CCCCCGGTGGCAAGATGCCAACTTCGTGCTGGGCAG...ACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp GCCAGGCCAGGCACAACCAGAAGGCCGGGCTGGAGCAAGGAGGAGAAAGGGGCTATCTCAGACACTAATTaGTGGTTTGTTCTACAGCCG +
Preference number: 5 (lower is better)
Translates to: ARPGTTRRPGWSKEEKGAISDTN*WFVLQP
Trigger: CGGCTGTAGAACAAACCACAAATTAGTGTCTGAGAT...AGCCCCTTTCTCCTCCTTGCTCCAGCCCGGCCTTCTGGTTGTGCCTGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CAA 90 bp TCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGCGAATGTCGCAGCTCCGTTTGGACTaGCACTCGAAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SADHSYTRRDTTVSRRMSQLRLD*HSKRMG
Trigger: CCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCTG...CGACATTCGCCGTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTTGCCGGATCTTCCTCTaGGCCTCGTCCAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSCRIFL*ASSSCR
Trigger: GCGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGCA...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS TCA 90 bp TCGGCCAAAGTTAATCACTGTTCCTTCTGTGTGATAACCACGCTGTaGACCCCACAGCTTCTCTGGGACCTTCCAGCGACCCCTACGCCT +
Preference number: 5 (lower is better)
Translates to: SAKVNHCSFCVITTL*TPQLLWDLPATPTP
Trigger: AGGCGTAGGGGTCGCTGGAAGGTCCCAGAGAAGCTGTGGGGTTCACAGCGTGGTTATCACACAGAAGGAACAGTGATTAACTTTGGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509981.1
CDS-3UTR CAA 90 bp TCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCAGCAGGTCATGTGGTTaGCCACCACAGATAGGGCAC +
Preference number: 5 (lower is better)
Translates to: SQWPSHSSVRTTNCCDHSSRSCG*PPQIGH
Trigger: GTGCCCTATCTGTGGTGGCAAACCACATGACCTGCT...GCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCACTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS-3UTR CAA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGATTTGAGGAAAATACCTaGAAACCGTCGGTAGGACTA +
Preference number: 5 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGFEENT*KPSVGL
Trigger: TAGTCCTACCGACGGTTTCAAGGTATTTTCCTCAAA...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp CTTCACTTGCTCTCCGAGGCGCAGGCGCACAGAAACAGCGGCCACGGACCACAGCCTCTGCTGCGTTTTTaGTTAGTATCAAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: LHLLSEAQAHRNSGHGPQPLLRF*LVSNCL
Trigger: AAGACAGTTTGATACTAACAAAAAACGCAGCAGAGG...CTGTGGTCCGTGGCCGCTGTTTCTGTGCGCCTGCGCCTCGGAGAGCAAGTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp GCCTCGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCCCTCTGCTGCGTTTTTaGTTAGTATCAAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: ASVLTSVAPEASDDMSVVPLLRF*LVSNCL
Trigger: AAGACAGTTTGATACTAACAAAAAACGCAGCAGAGG...GACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp TTGAGGCGTCCACGCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACCAGAAATTAATCCACTaGAGGCGTCCACGCGGAACA +
Preference number: 5 (lower is better)
Translates to: LRRPRGTRSADHSYTRRDQKLIH*RRPRGT
Trigger: TGTTCCGCGTGGACGCCTCAAGTGGATTAATTTCTG...GTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGCGTGGACGCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCGGTGCTGCGCGCACTaGTGCTGTGAAAACAGGGGG +
Preference number: 5 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSRCCAH*CCENRG
Trigger: CCCCCTGTTTTCACAGCACAAGTGCGCGCAGCACCG...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp AAATTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTGTTCTGCTTGCTGTCTaGCTCGCTGCCCCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: KFLGLQSALKDPSSQWPSVLLAV*LAAPRA
Trigger: GGCCCTAGGGGCAGCGAGCAAGACAGCAAGCAGAAC...ACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS-3UTR CAA 90 bp CGGTCCTCACGTCGGTGGCACCAGAAGCGAGTGACGACATGTCCGTGGTCAGGACCTCTGCTGCGTTTTTaGTTAGTATCAAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: RSSRRWHQKRVTTCPWSGPLLRF*LVSNCL
Trigger: AAGACAGTTTGATACTAACAAAAAACGCAGCAGAGG...TCCTGACCACGGACATGTCGTCACTCGCTTCTGGTGCCACCGACGTGAGGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp GGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGCTGCCAGCCATTCTTaGGTCTTCCCACTGCTCACC +
Preference number: 5 (lower is better)
Translates to: GLQSALKDPSSQWPSHSSAASHS*VFPLLT
Trigger: GGTGAGCAGTGGGAAGACCAAAGAATGGCTGGCAGC...ACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp GCGGAACAAGGTCTGCTGACCACAGTTACACACGTCGTGACACCACTGTATCACGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: AEQGLLTTVTHVVTPLYHGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...GTGATACAGTGGTGTCACGACGTGTGTAACTGTGGTCAGCAGACCTTGTTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp ATAACGTGTAACAGGAAGGGCTCCCAGCCTCGGTCCTCACGTCGGTGGCACCAGCCTCTGCTGCGTTTTTaGTTAGTATCAAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: ITCNRKGSQPRSSRRWHQPLLRF*LVSNCL
Trigger: AAGACAGTTTGATACTAACAAAAAACGCAGCAGAGG...CTGGTGCCACCGACGTGAGGACCGAGGCTGGGAGCCCTTCCTGTTACACGTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp TGGCCTAGTCACAGTAGTGTCAGGACCACAAACTGCTGTGATCACAGCGCCGCGTTTGAGGAAAATACCTaGAAACCGTCGGTAGGACTA +
Preference number: 5 (lower is better)
Translates to: WPSHSSVRTTNCCDHSAAFEENT*KPSVGL
Trigger: TAGTCCTACCGACGGTTTCAAGGTATTTTCCTCAAA...CGCGGCGCTGTGATCACAGCAGTTTGTGGTCCTGACACTACTGTGACTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp TTCCTCGGTTTACAAAGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACGGTTTACAAAGTGCTTaGAAAGACCCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: FLGLQSALKDPSSQWPSHGLQSA*KDPSSQ
Trigger: CTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACC...GTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACTTTGTAAACCGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000508903.7
ENST00000674376.1
CDS-3UTR CAA 90 bp CACTTATCCCAGAAAAGACCAGAGGCTCCAAATGGGAACCAAGTGCATAAATACGCTGCCAGCCATTCTTaGGTCTTCCCACTGCTCACC +
Preference number: 5 (lower is better)
Translates to: HLSQKRPEAPNGNQVHKYAASHS*VFPLLT
Trigger: GGTGAGCAGTGGGAAGACCAAAGAATGGCTGGCAGC...GTATTTATGCACTTGGTTCCCATTTGGAGCCTCTGGTCTTTTCTGGGATAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000403703.5
CDS-3UTR CAA 90 bp ATGACAAAATCTCAGACACTAATTTGTGGTTTGTTCTACAGCCGTTCAGGTCCTCGGTGCTGCGCGCACTaGTGCTGTGAAAACAGGGGG +
Preference number: 5 (lower is better)
Translates to: MTKSQTLICGLFYSRSGPRCCAH*CCENRG
Trigger: CCCCCTGTTTTCACAGCACAAGTGCGCGCAGCACCG...AGGACCTGAACGGCTGTAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CAA 90 bp TCAAAAGAGGCGAGGGTGGCTCTCTGCTCAAAGGAAGAGCTGGACACAGACAGGACACTAATTTGTGGTTaGTTCTACAGCCGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SKEARVALCSKEELDTDRTLICG*FYSRSG
Trigger: ACCTGAACGGCTGTAGAACAAACCACAAATTAGTGT...CCTGTCTGTGTCCAGCTCTTCCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS-3UTR CAA 90 bp AGTGCTTTGAAAGACCCCAGCTCCCAGTGGCCTAGTCACAGTAGTGTCAGGACCCCTCTGCTGCGTTTTTaGTTAGTATCAAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: SALKDPSSQWPSHSSVRTPLLRF*LVSNCL
Trigger: AAGACAGTTTGATACTAACAAAAAACGCAGCAGAGG...GGTCCTGACACTACTGTGACTAGGCCACTGGGAGCTGGGGTCTTTCAAAGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS-3UTR CAA 90 bp CTTTCCATGACGGGCGATGACAAAATCTCAGACACTAATTTGTGGTTTGTTCTAACGCCGGTGGCTTCGTaGTACTTGGAGCAGTACACG +
Preference number: 5 (lower is better)
Translates to: LSMTGDDKISDTNLWFVLTPVAS*YLEQYT
Trigger: CGTGTACTGCTCCAAGTACAACGAAGCCACCGGCGT...TAGAACAAACCACAAATTAGTGTCTGAGATTTTGTCATCGCCCGTCATGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS CCA 72 bp CGGAGCCGGCGCTGGACGCCAGGCTGGACGCCACGCTaGAGCTCACGCTGGGGGCCGGCGGGTGGACCGCTG +
Preference number: 6 (lower is better)
Translates to: RSRRWTPGWTPR*SSRWGPAGGPL
Trigger: CAGCGGTCCACCCGCCGGCCCCCAGCGTGAGCTCCAGCGTGGCGTCCAGCCTGGCGTCCAGCGCCGGCTCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS CCA 72 bp GGGAGGAGCTGCCGGAGCCGGCGCTGGACGCCAGGCTaGACGCCACGCTGGAGCTCACGCTGGGGGCCGGCG +
Preference number: 6 (lower is better)
Translates to: GRSCRSRRWTPG*TPRWSSRWGPA
Trigger: CGCCGGCCCCCAGCGTGAGCTCCAGCGTGGCGTCCAGCCTGGCGTCCAGCGCCGGCTCCGGCAGCTCCTCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS CCA 72 bp CCCGCTCCTGACCGCCGAGTAACGAGACCCGCACCTTaGCGGCGCACGGCTGCCACGCGCTGGGGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PAPDRRVTRPAP*RRTAATRWGRR
Trigger: GCGGCGGCCCCAGCGCGTGGCAGCCGTGCGCCGCCAAGGTGCGGGTCTCGTTACTCGGCGGTCAGGAGCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248104.11
ENST00000397464.5
ENST00000403703.5
ENST00000674376.1
CDS GCA 72 bp CCCAGTGTGCCCGGCTCTGAACGCAGGGGTGGCGGCTaGTGGGGAGGCGTCATGGCTGAGGAGCCCACCGGC +
Preference number: 6 (lower is better)
Translates to: PSVPGSERRGGG*WGGVMAEEPTG
Trigger: GCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000674376.1
CDS TCA 72 bp CCCGCTGAGTCACCGCGACACAGCCCGGCTCTGCCGTaGCACAGCACATTCAAGGCGCCGCGGTCCCCCGGG +
Preference number: 6 (lower is better)
Translates to: PAESPRHSPALP*HSTFKAPRSPG
Trigger: CCCGGGGGACCGCGGCGCCTTGAATGTGCTGTGTCACGGCAGAGCCGGGCTGTGTCGCGGTGACTCAGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515195.1
CDS GCA 72 bp GCCCTGCTGTGCTCGCGGCCTGGTGGGATTGGTGGGTaGTATGCCCCAGGCCCCACCGCTACGTGGGCACCC +
Preference number: 6 (lower is better)
Translates to: ALLCSRPGGIGG*YAPGPTATWAP
Trigger: GGGTGCCCACGTAGCGGTGGGGCCTGGGGCATAGCACCCACCAATCCCACCAGGCCGCGAGCACAGCAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS GCA 72 bp CCGGCCCCGCTGAGTCACCGCGACACAGCCCGGCTCTaGCGTGACACAGCACATTCAAGGCGCCGCGGTCCC +
Preference number: 6 (lower is better)
Translates to: PAPLSHRDTARL*RDTAHSRRRGP
Trigger: GGGACCGCGGCGCCTTGAATGTGCTGTGTCACGGCAGAGCCGGGCTGTGTCGCGGTGACTCAGCGGGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515195.1
CDS CCA 72 bp AGTGTGCCCGGCTCTGAACGCAGGGGTGGCGGCTGCTaGGGAGGCGTCATGGCTGAGGAGCCCACCGGCCCT +
Preference number: 6 (lower is better)
Translates to: SVPGSERRGGGC*GGVMAEEPTGP
Trigger: AGGGCCGGTGGGCTCCTCAGCCATGACGCCTCCCCAGCAGCCGCCACCCCTGCGTTCAGAGCCGGGCACACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000674376.1
CDS CCA 72 bp CCCAGCCCTGCTGTGCTCGCGGCCTGGTGGGATTGGTaGGTGCTATGCCCCAGGCCCCACCGCTACGTGGGC +
Preference number: 6 (lower is better)
Translates to: PSPAVLAAWWDW*VLCPRPHRYVG
Trigger: GCCCACGTAGCGGTGGGGCCTGGGGCATAGCACCCACCAATCCCACCAGGCCGCGAGCACAGCAGGGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS CAA 90 bp CGGTCGATGACGGCCCAGCCCTGCTGTGCTCGCGGCCTGGTGGGATaGGTGGGTGCTATGCCCCAGGCCCCACCGCTACGTGGGCACCCT +
Preference number: 6 (lower is better)
Translates to: RSMTAQPCCARGLVG*VGAMPQAPPLRGHP
Trigger: AGGGTGCCCACGTAGCGGTGGGGCCTGGGGCATAGCACCCACCAATCCCACCAGGCCGCGAGCACAGCAGGGCTGGGCCGTCATCGACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS TCA 72 bp CCTCAGCCCCGGGCGTTAGGAAACCACCGGCCCCGCTaGGTCACCGCGACACAGCCCGGCTCTGCCGTGACA +
Preference number: 6 (lower is better)
Translates to: PQPRALGNHRPR*VTATQPGSAVT
Trigger: TGTCACGGCAGAGCCGGGCTGTGTCGCGGTGACTCAGCGGGGCCGGTGGTTTCCTAACGCCCGGGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513783.1
ENST00000515195.1
CDS GCA 72 bp GCTGTGCTCGCGGCCTGGTGGGATTGGTGGGTGCTATaGCCCAGGCCCCACCGCTACGTGGGCACCCTCTGG +
Preference number: 6 (lower is better)
Translates to: AVLAAWWDWWVL*PRPHRYVGTLW
Trigger: CCAGAGGGTGCCCACGTAGCGGTGGGGCCTGGGGCATAGCACCCACCAATCCCACCAGGCCGCGAGCACAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS CCA 72 bp GACGCCACGCTGGAGCTCACGCTGGGGGCCGGCGGGTaGACCGCTGCAAACACGGCCAGGTGGTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: DATLELTLGAGG*TAANTARWFCL
Trigger: CAAGCAGAACCACCTGGCCGTGTTTGCAGCGGTCCACCCGCCGGCCCCCAGCGTGAGCTCCAGCGTGGCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS CCA 72 bp TGCCACAAGGGCAGCCCTCCCATTAGAACCCCGGGGTaGGCAACGCGAGCCACGGGCCGGGAAGGACGCCCA +
Preference number: 6 (lower is better)
Translates to: CHKGSPPIRTPG*ATRATGREGRP
Trigger: TGGGCGTCCTTCCCGGCCCGTGGCTCGCGTTGCCCACCCCGGGGTTCTAATGGGAGGGCTGCCCTTGTGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502438.6
CDS CAA 72 bp GCACCGTGGGCCCGCTCCCGGCAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATCACCTGTGCCTCCACC +
Preference number: 6 (lower is better)
Translates to: APWARSRQATHC*ARSWKITCAST
Trigger: GGTGGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397464.5
ENST00000508903.7
ENST00000674376.1
CDS CAA 72 bp ACGGCCCAGCCCTGCTGTGCTCGCGGCCTGGTGGGATaGGTGGGTGCTATGCCCCAGGCCCCACCGCTACGT +
Preference number: 6 (lower is better)
Translates to: TAQPCCARGLVG*VGAMPQAPPLR
Trigger: ACGTAGCGGTGGGGCCTGGGGCATAGCACCCACCAATCCCACCAGGCCGCGAGCACAGCAGGGCTGGGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS CAA 90 bp CGCAGGACAGCACCGTGGGCCCGCTCCCGGCAGGCCACACACTGCTaGGCGCGGAGCTGGAAGATCACCTGTGCCTCCACCTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RRTAPWARSRQATHC*ARSWKITCASTSSF
Trigger: GAAGGAGGAGGTGGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGTCCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397464.5
ENST00000508903.7
ENST00000674376.1
CDS TCA 72 bp ACGGGCCGGGAAGGACGCCCACCAGCCGGAGTCCTCTaGGCACGGTCCCGCAGGCTCACCTGTACTGGAACC +
Preference number: 6 (lower is better)
Translates to: TGREGRPPAGVL*ARSRRLTCTGT
Trigger: GGTTCCAGTACAGGTGAGCCTGCGGGACCGTGCTCAGAGGACTCCGGCTGGTGGGCGTCCTTCCCGGCCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502438.6
CDS GCA 72 bp GGCCGCAGGTCCAGGGGGCCGTGCGCGAAGGCACAGTaGAGCCCATTCTTCACGCAGTGGCCACGTGCGTCT +
Preference number: 6 (lower is better)
Translates to: GRRSRGPCAKAQ*SPFFTQWPRAS
Trigger: AGACGCACGTGGCCACTGCGTGAAGAATGGGCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCTGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301712.5
ENST00000382757.9
ENST00000389221.9
ENST00000503648.1
ENST00000508903.7
CDS GCA 72 bp ACGTCACACACGGGCGGCCGCAGGTCCAGGGGGCCGTaGGCGAAGGCACAGTGCAGCCCATTCTTCACGCAG +
Preference number: 6 (lower is better)
Translates to: TSHTGGRRSRGP*AKAQCSPFFTQ
Trigger: CTGCGTGAAGAATGGGCTGCACTGTGCCTTCGCGCACGGCCCCCTGGACCTGCGGCCGCCCGTGTGTGACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301712.5
ENST00000382757.9
ENST00000389221.9
ENST00000503648.1
ENST00000508903.7
CDS GCA 72 bp ACAGCACCGTGGGCCCGCTCCCGGCAGGCCACACACTaGTTGGCGCGGAGCTGGAAGATCACCTGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: TAPWARSRQATH*LARSWKITCAS
Trigger: GGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397464.5
ENST00000508903.7
ENST00000674376.1
CDS CCA 72 bp AGTGTAGCGATGGTGCTCTGGGCAGGGAGCCGGGGATaGCGACAGGTGCAGAGCCGGCCAGCGACCTGGGAC +
Preference number: 6 (lower is better)
Translates to: SVAMVLWAGSRG*RQVQSRPATWD
Trigger: GTCCCAGGTCGCTGGCCGGCTCTGCACCTGTCGCCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTACACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000515195.1
ENST00000674376.1
CDS CCA 72 bp GGGCTCAGGCGGTGGAGGAAGGTCCTGTGTGCACCCTaGGCAGGGCGACCCTTGGGTTGTTGGCCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: GLRRWRKVLCAP*AGRPLGCWPWD
Trigger: GTCCCAGGGCCAACAACCCAAGGGTCGCCCTGCCCAGGGTGCACACAGGACCTTCCTCCACCGCCTGAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS CCA 72 bp CACCGTGGGCCCGCTCCCGGCAGGCCACACACTGCTTaGCGCGGAGCTGGAAGATCACCTGTGCCTCCACCT +
Preference number: 6 (lower is better)
Translates to: HRGPAPGRPHTA*RGAGRSPVPPP
Trigger: AGGTGGAGGCACAGGTGATCTTCCAGCTCCGCGCCAAGCAGTGTGTGGCCTGCCGGGAGCGGGCCCACGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397464.5
ENST00000508903.7
ENST00000674376.1
CDS CAA 90 bp GTGGAGGAAGGTCCTGTGTGCACCCTGGGCAGGGCGACCCTTGGGTaGTTGGCCCTGGGACTCAGCCTAAGGACCCGGCGTCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: VEEGPVCTLGRATLG*LALGLSLRTRRPSC
Trigger: GCAGCTGGGACGCCGGGTCCTTAGGCTGAGTCCCAGGGCCAACAACCCAAGGGTCGCCCTGCCCAGGGTGCACACAGGACCTTCCTCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS GCA 72 bp GTCCCAGCTGCCAGCTGTACTGGAACCGCCGGGGGTTaGGCCGCCTGTCCCGGCTATTGTGGTAGTGTGGGC +
Preference number: 6 (lower is better)
Translates to: VPAASCTGTAGG*AACPGYCGSVG
Trigger: GCCCACACTACCACAATAGCCGGGACAGGCGGCGCAACCCCCGGCGGTTCCAGTACAGCTGGCAGCTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS CCA 72 bp CTGGGAGGGGCTGGGACAGCGAACCGAGCGGCGAGGTaGACGCAGAGGATGGCGAGTGTAGCGATGGTGCTC +
Preference number: 6 (lower is better)
Translates to: LGGAGTANRAAR*TQRMASVAMVL
Trigger: GAGCACCATCGCTACACTCGCCATCCTCTGCGTCCACCTCGCCGCTCGGTTCGCTGTCCCAGCCCCTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000674376.1
CDS CCA 72 bp AGGTTCCGTGTGAGGCCCCTCAGTCAGGACGGCATCTaGGAGGGAGCCCCACGGAGGCTTCACGGCAACGCC +
Preference number: 6 (lower is better)
Translates to: RFRVRPLSQDGI*EGAPRRLHGNA
Trigger: GGCGTTGCCGTGAAGCCTCCGTGGGGCTCCCTCCCAGATGCCGTCCTGACTGAGGGGCCTCACACGGAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS CCA 72 bp CCGCAGAGATTCAGAGCAGGTGCGGGGGAAGGCGCCTaGGCCCAAATCCCACTCGGCACCCACCCCCTGTTG +
Preference number: 6 (lower is better)
Translates to: PQRFRAGAGEGA*AQIPLGTHPLL
Trigger: CAACAGGGGGTGGGTGCCGAGTGGGATTTGGGCCCAGGCGCCTTCCCCCGCACCTGCTCTGAATCTCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503648.1
CDS CAA 72 bp GGTCCTGTGTGCACCCTGGGCAGGGCGACCCTTGGGTaGTTGGCCCTGGGACTCAGCCTAAGGACCCGGCGT +
Preference number: 6 (lower is better)
Translates to: GPVCTLGRATLG*LALGLSLRTRR
Trigger: ACGCCGGGTCCTTAGGCTGAGTCCCAGGGCCAACAACCCAAGGGTCGCCCTGCCCAGGGTGCACACAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS TCA 72 bp CGTTGTACTTGGAGCAGTACACGTCGGGGCTGTAGTTaGAGGTGCCGTCGCGCCTGCGGAGGGGCCTGCGGC +
Preference number: 6 (lower is better)
Translates to: RCTWSSTRRGCS*RCRRACGGACG
Trigger: GCCGCAGGCCCCTCCGCAGGCGCGACGGCACCTTCAACTACAGCCCCGACGTGTACTGCTCCAAGTACAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301712.5
ENST00000382757.9
ENST00000389221.9
ENST00000503648.1
ENST00000508903.7
ENST00000566707.1
CDS GCA 72 bp CCACCAGGCTCAGGAAGAGGCGCTGACAGTGACACCTaGCCCGGCCGGTCTCCCCACCAGATCTACGCCTTC +
Preference number: 6 (lower is better)
Translates to: PPGSGRGADSDT*PGRSPHQIYAF
Trigger: GAAGGCGTAGATCTGGTGGGGAGACCGGCCGGGGCAGGTGTCACTGTCAGCGCCTCTTCCTGAGCCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS CCA 72 bp TGGACGCAGAGGATGGCGAGTGTAGCGATGGTGCTCTaGGCAGGGAGCCGGGGATGGCGACAGGTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: WTQRMASVAMVL*AGSRGWRQVQS
Trigger: GCTCTGCACCTGTCGCCATCCCCGGCTCCCTGCCCAGAGCACCATCGCTACACTCGCCATCCTCTGCGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000513783.1
ENST00000515195.1
ENST00000674376.1
CDS CCA 72 bp GGAAGGTCCTGTGTGCACCCTGGGCAGGGCGACCCTTaGGTTGTTGGCCCTGGGACTCAGCCTAAGGACCCG +
Preference number: 6 (lower is better)
Translates to: GRSCVHPGQGDP*VVGPGTQPKDP
Trigger: CGGGTCCTTAGGCTGAGTCCCAGGGCCAACAACCCAAGGGTCGCCCTGCCCAGGGTGCACACAGGACCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301712.5
CDS CCA 72 bp CCTGGGCCCAAATCCCACTCGGCACCCACCCCCTGTTaGGGAGGGCTTGGTATTGGACTCCACGAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: PGPKSHSAPTPC*GGLGIGLHEPR
Trigger: CCGAGGCTCGTGGAGTCCAATACCAAGCCCTCCCCAACAGGGGGTGGGTGCCGAGTGGGATTTGGGCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503648.1
CDS GCA 72 bp GAGTGTGAAACGGTCGATGACGGCCCAGCCCTGCTGTaGTCGCGGCCTGGTGGGATTGGTGGGTGCTATGCC +
Preference number: 6 (lower is better)
Translates to: ECETVDDGPALL*SRPGGIGGCYA
Trigger: GGCATAGCACCCACCAATCCCACCAGGCCGCGAGCACAGCAGGGCTGGGCCGTCATCGACCGTTTCACACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS CCA 72 bp CCGGCCAGCGACCTGGGACCTGCTGCTCCCAGGTCGTaGCCGTCTTGCTCTTCCAGGTCCTTCTCTAGGGAT +
Preference number: 6 (lower is better)
Translates to: PASDLGPAAPRS*PSCSSRSFSRD
Trigger: ATCCCTAGAGAAGGACCTGGAAGAGCAAGACGGCCACGACCTGGGAGCAGCAGGTCCCAGGTCGCTGGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248104.11
ENST00000389221.9
ENST00000397464.5
ENST00000402641.6
ENST00000403703.5
ENST00000508903.7
ENST00000515195.1
ENST00000674376.1
CDS TCA 72 bp TTCCCGGCTGGCCGCTGCCCGTGGAGGAAGGACTCGTaGGGTGGAGGTCGTGACAGCCCCATTCATTCACCA +
Preference number: 6 (lower is better)
Translates to: FPAGRCPWRKDS*GGGRDSPIHSP
Trigger: TGGTGAATGAATGGGGCTGTCACGACCTCCACCTCACGAGTCCTTCCTCCACGGGCAGCGGCCAGCCGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS TCA 72 bp GCCACTGTGCTTGGAGATGCCCTCCCCTCCCGGGGATaGTGGTGCCACAAGGGCAGCCCTCCCATTAGAACC +
Preference number: 6 (lower is better)
Translates to: ATVLGDALPSRG*WCHKGSPPIRT
Trigger: GGTTCTAATGGGAGGGCTGCCCTTGTGGCACCATCATCCCCGGGAGGGGAGGGCATCTCCAAGCACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502438.6
CDS GCA 72 bp AACCTGAGTGTGAAACGGTCGATGACGGCCCAGCCCTaGTGTGCTCGCGGCCTGGTGGGATTGGTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: NLSVKRSMTAQP*CARGLVGLVGA
Trigger: AGCACCCACCAATCCCACCAGGCCGCGAGCACAGCAGGGCTGGGCCGTCATCGACCGTTTCACACTCAGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS CAA 90 bp TCGGTCTGCGGCGTGGGGGAACCTGTGAGCAGCAGGTCATGTGGTTaGCCACCACAGATAGGGCACAAGGTTCCGTGTGAGGCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: SVCGVGEPVSSRSCG*PPQIGHKVPCEAPQ
Trigger: CTGAGGGGCCTCACACGGAACCTTGTGCCCTATCTGTGGTGGCAAACCACATGACCTGCTGCTCACAGGTTCCCCCACGCCGCAGACCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS TCA 72 bp TGGTTTGCCACCACAGATAGGGCACAAGGTTCCGTGTaGGGCCCCTCAGTCAGGACGGCATCTGGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: WFATTDRAQGSV*GPSVRTASGRE
Trigger: CTCCCTCCCAGATGCCGTCCTGACTGAGGGGCCTCACACGGAACCTTGTGCCCTATCTGTGGTGGCAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248104.11
ENST00000403703.5
CDS GCA 72 bp GGCTGGGGGAGAAGCTGCCGGAAACAAAGTCCCAGATaGTCCCGGGGACACCGTTCAAACCTGAGTGTGAAA +
Preference number: 6 (lower is better)
Translates to: GWGRSCRKQSPR*SRGHRSNLSVK
Trigger: TTTCACACTCAGGTTTGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS TCA 72 bp CCCACTTCCTTGAAACCGTCGGTAGGACTAGATAGGTaGCAACGTGTGACAGGAAAGGCTGTCAGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: PTSLKPSVGLDR*QRVTGKAVRPS
Trigger: GCTTGGCCTGACAGCCTTTCCTGTCACACGTTGTCACCTATCTAGTCCTACCGACGGTTTCAAGGAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562537.1
CDS CCA 72 bp GAATTAAATTCAAGTTCCTGGGACCACACCATGAGGTaGGAGGGGCAGTGGTTCTCAGACTCCACTCCCAGG +
Preference number: 6 (lower is better)
Translates to: ELNSSSWDHTMR*EGQWFSDSTPR
Trigger: CCTGGGAGTGGAGTCTGAGAACCACTGCCCCTCCCACCTCATGGTGTGGTCCCAGGAACTTGAATTTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511095.2
CDS CAA 90 bp CCGTCTTGCTCTTCCAGGTCCTTCTCTAGGGATGCAATATTCACATaGCTAAGATGCAGGTCTAACGCAGAACCTTGGCGGCGCACGGCT +
Preference number: 6 (lower is better)
Translates to: PSCSSRSFSRDAIFT*LRCRSNAEPWRRTA
Trigger: AGCCGTGCGCCGCCAAGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAATATTGCATCCCTAGAGAAGGACCTGGAAGAGCAAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402641.6
CDS TCA 72 bp GTTAATCACTGTTCCTTCTGTGTGATAACCACGCTGTaGACCCCACAGCTTCTCTGGGACCTTCCAGCGACC +
Preference number: 6 (lower is better)
Translates to: VNHCSFCVITTL*TPQLLWDLPAT
Trigger: GGTCGCTGGAAGGTCCCAGAGAAGCTGTGGGGTTCACAGCGTGGTTATCACACAGAAGGAACAGTGATTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509981.1
CDS CAA 90 bp CCGTCTTGCTCTTCCAGGTCCTTCTCTAGGGATGCAATATTCACATaGCTAAGATGCAGGTCTAACGCAGAACCGAGGACGGCCTCCACA +
Preference number: 6 (lower is better)
Translates to: PSCSSRSFSRDAIFT*LRCRSNAEPRTAST
Trigger: TGTGGAGGCCGTCCTCGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAATATTGCATCCCTAGAGAAGGACCTGGAAGAGCAAGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS GCA 72 bp TCCTTCTCTAGGGATGCAATATTCACATTGCTAAGATaGAGGTCTAACGCAGAACCTTGGCGGCGCACGGCT +
Preference number: 6 (lower is better)
Translates to: SFSRDAIFTLLR*RSNAEPWRRTA
Trigger: AGCCGTGCGCCGCCAAGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAATATTGCATCCCTAGAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402641.6
CDS GCA 72 bp TCCTTCTCTAGGGATGCAATATTCACATTGCTAAGATaGAGGTCTAACGCAGAACCGAGGACGGCCTCCACA +
Preference number: 6 (lower is better)
Translates to: SFSRDAIFTLLR*RSNAEPRTAST
Trigger: TGTGGAGGCCGTCCTCGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAATATTGCATCCCTAGAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389221.9
ENST00000508903.7
CDS CAA 90 bp CCGTCTTGCTCTTCCAGGTCCTTCTCTAGGGATGCAATATTCACATaGCTAAGATGCAGGTCTAACGCAGAACCTCACTGTTTCAAGGTT +
Preference number: 6 (lower is better)
Translates to: PSCSSRSFSRDAIFT*LRCRSNAEPHCFKV
Trigger: AACCTTGAAACAGTGAGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAATATTGCATCCCTAGAGAAGGACCTGGAAGAGCAAGACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515195.1
CDS GCA 72 bp TCCTTCTCTAGGGATGCAATATTCACATTGCTAAGATaGAGGTCTAACGCAGAACCTCACTGTTTCAAGGTT +
Preference number: 6 (lower is better)
Translates to: SFSRDAIFTLLR*RSNAEPHCFKV
Trigger: AACCTTGAAACAGTGAGGTTCTGCGTTAGACCTGCATCTTAGCAATGTGAATATTGCATCCCTAGAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515195.1