RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC93A (Homo sapiens)

Ensembl gene IDs: ENSG00000112494

Ensembl transcript IDs: ENST00000230256.8, ENST00000366829.2, ENST00000366830.2, ENST00000503433.5, ENST00000504706.1

Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp AGGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTaGCTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGA +
Preference number: 3 (lower is better)
Translates to: RNPEPQSGFVTP*LCEVESADLSG
Trigger: TCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
3UTR-3UTR CAA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCGTTGAGTCAGCTGACTaGTCAGGACCCCTTTGTAAA +
Preference number: 3 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVVESAD*SGPLCK
Trigger: TTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAAC...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR GCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTCTGCCAGACGGCATCTaGCACGCCCCACAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSLPDGI*HAPQAR
Trigger: TCTGGCCTGTGGGGCGTGGCAGATGCCGTCTGGCAG...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTAGCCCAGCCTCTCGATaGGGAGCGGTGGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSSPASR*GAVGGT
Trigger: TGTTCCTCCCACCGCTCCTCATCGAGAGGCTGGGCT...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTATCATGCAGGACACGTaGGTCACCGCGCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSIMQDT*VTAPST
Trigger: CGTGCTGGGCGCGGTGACCCACGTGTCCTGCATGAT...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCGAGGTATGTGCACTGTaGAGACCACAGCGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVEVCAL*RPQRGG
Trigger: GCCGCCCCGCTGTGGTCTGCACAGTGCACATACCTC...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR GCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTCGTACAGCACAGCCCTaGCCGTGTACTGCGAGACCT +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSRTAQP*PCTARP
Trigger: AGGTCTCGCAGTACACGGGCAGGGCTGTGCTGTACG...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCTGCCAGACGGCATCTaGCACGCCCCACAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFLPDGI*HAPQAR
Trigger: TCTGGCCTGTGGGGCGTGGCAGATGCCGTCTGGCAG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTCACACATGGAGAGGATaGTGGTCCCCTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSHTWRG*WSPCSP
Trigger: TGGGCTGCAAGGGGACCATCATCCTCTCCATGTGTG...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCGCGGTGGGAGGAACATaGAGGACAGGAGCATGCCTC +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVAVGGT*RTGACL
Trigger: GAGGCATGCTCCTGTCCTCCATGTTCCTCCCACCGC...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGCCTCTGGGTGCTGTTaGTGGTTGTGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSASGCC*WLWWPS
Trigger: TGATGGCCACCACAACCACCAACAGCACCCAGAGGC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCTGCTGGGAGGGCCTCTaGGTGCTGTTGGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVCWEGL*VLLVVV
Trigger: CACAACCACCAACAGCACCCAGAGGCCCTCCCAGCA...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTATCATGCAGGACACGTaGGTCACCGCGCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFIMQDT*VTAPST
Trigger: CGTGCTGGGCGCGGTGACCCACGTGTCCTGCATGAT...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGGCTTTGTCACCCCCTaGCTCTGTGAGGTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSGFVTP*LCEVES
Trigger: TGACTCAACCTCACAGAGTCAGGGGGTGACAAAGCC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCCTCGCTGTACAGGCTaGTCTGCAGGCTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFPRCTG*SAGSAD
Trigger: GTCTGCAGAGCCTGCAGAGCAGCCTGTACAGCGAGG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCAGCTGGCGAAGAAGTTaGCCACGGAGAAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVSWRRS*PRRRPR
Trigger: ACGTGGCCTTCTCCGTGGGCAACTTCTTCGCCAGCT...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR GCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTCCACAGGACGTGAGCTaGTCTTCTGGAAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSPQDVS*SSGRVS
Trigger: AGAGACCCTTCCAGAAGAGCAGCTCACGTCCTGTGG...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCTCTGGGTGCTGTTGGTaGTTGTGGTGGCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVSGCCW*LWWPSG
Trigger: GCCTGATGGCCACCACAACCACCAACAGCACCCAGA...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTAGCACAGCGCGTCAGTaGCCGAGAAGCAGATCATCA +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSSTARQ*PRSRSS
Trigger: TGATGATCTGCTTCTCGGCCACTGACGCGCTGTGCT...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCACACATGGAGAGGATaGTGGTCCCCTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFHTWRG*WSPCSP
Trigger: TGGGCTGCAAGGGGACCATCATCCTCTCCATGTGTG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGCCAAATACCAGCGATaGGATCAAGTTGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSAKYQR*DQVAPH
Trigger: GTGTGGGGCAACTTGATCTCATCGCTGGTATTTGGC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTCCTTCACTTTCCCGCTaGACATCTCGTATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSPSLSR*TSRMGW
Trigger: CCAACCCATACGAGATGTTCAGCGGGAAAGTGAAGG...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTTGCCCAGGGTGCAGGTaGCATAGGACCTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSCPGCR*HRTLCI
Trigger: AATACACAAGGTCCTATGTCACCTGCACCCTGGGCA...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGGTTCACCATGTCTTTaGCACGCTTTCCCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSGSPCL*HAFPPS
Trigger: AGAAGGCGGGAAAGCGTGGCAAAGACATGGTGAACC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGCGATGAGATCAAGTTaGCCCACACACCGGATGACT +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSAMRSS*PTHRMT
Trigger: AGTCATCCGGTGTGTGGGGCAACTTGATCTCATCGC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCCACTCCCAGTGTAGATaGCCAGGAGGGTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVHSQCR*PGGCRP
Trigger: TGGTCTACACCCTCCTGGGCATCTACACTGGGAGTG...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR GCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGAGAGGAATCCTTGCTaGAATCCACTGTACAGCGGC +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSERNPC*NPLYSG
Trigger: GCCGCTGTACAGTGGATTGCAGCAAGGATTCCTCTC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGCAGTAGGGCAATCATaGAGGACACGTGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFAVGQS*RTRGSP
Trigger: CGGTGACCCACGTGTCCTGCATGATTGCCCTACTGC...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCTCGATGAGGAGCGGTaGGAGGAACATGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFLDEER*EEHGGQ
Trigger: CTGTCCTCCATGTTCCTCCCACCGCTCCTCATCGAG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTTCTTGGCTGGGAGTCTaGCCAAATACCAGCGATGAG +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSSWLGV*PNTSDE
Trigger: CTCATCGCTGGTATTTGGCCAGACTCCCAGCCAAGA...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCTGTTGGTGGTTGTGGTaGCCATCAGGCAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVCWWLW*PSGSHW
Trigger: CCAGTGACTGCCTGATGGCCACCACAACCACCAACA...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR GCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGCCCTGCCCGTGTACTaGGAGACCTTTCCATACAAC +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFALPVY*ETFPYN
Trigger: GTTGTATGGAAAGGTCTCGCAGTACACGGGCAGGGC...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGAATACGAAGAACACTaGCAGATGGTCAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSEYEEH*QMVSTR
Trigger: CCTCGTGCTGACCATCTGGCAGTGTTCTTCGTATTC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCGCATTGTTTTGTGTCTaGCAGACGGCATCTGCCACG +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVALFCV*QTASAT
Trigger: CGTGGCAGATGCCGTCTGGCAGACACAAAACAATGC...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCTCAAAGTGTACCAGCTaGCGAAGAAGTTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVSKCTS*RRSCPR
Trigger: CCGTGGGCAACTTCTTCGCCAGCTGGTACACTTTGA...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCCCAGCAGTATGGAGGTaGGGATCAAAGTGTACCAGC +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVPAVWR*GSKCTS
Trigger: GCTGGTACACTTTGATCCCCACCTCCATACTGCTGG...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGCTGAACATCTCGTATaGGTTGGAGGAACGCAGCTA +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSAEHLV*VGGTQL
Trigger: TAGCTGCGTTCCTCCAACCCATACGAGATGTTCAGC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCCTTGGCTGGGAGTCTaGCCAAATACCAGCGATGAG +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFPWLGV*PNTSDE
Trigger: CTCATCGCTGGTATTTGGCCAGACTCCCAGCCAAGG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366829.2
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCACCACTCCCTTGGCTaGGAGTCTGGCCAAATACCA +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFHHSLG*ESGQIP
Trigger: TGGTATTTGGCCAGACTCCCAGCCAAGGGAGTGGTG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366829.2
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTAGGACACCACTCCCTTaGCTGGGAGTCTGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFRTPLP*LGVWPN
Trigger: ATTTGGCCAGACTCCCAGCCAAGGGAGTGGTGTCCT...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366829.2
CDS-3UTR TCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGCCCCACACACCGGATaGCTGGAATATGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFAPHTG*LEYEEE
Trigger: TTCTTCCTCATATTCCAGTCATCCGGTGTGTGGGGC...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTTGCCCAGGGTGCAGGTaGCATAGGACCTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFCPGCR*HRTLCI
Trigger: AATACACAAGGTCCTATGTCACCTGCACCCTGGGCA...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTTCTGGAAGGGTCTCTTaGCTGGGAGTCTGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFSGRVS*LGVWPN
Trigger: ATTTGGCCAGACTCCCAGCCAAGAGACCCTTCCAGA...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTAAGAACACTGCCAGATaGTCAGCACGAGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFKNTAR*SARGLH
Trigger: GTGGAGACCTCGTGCTGACCATCTGGCAGTGTTCTT...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
3UTR CAA 72 bp CCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTaGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: PSLALSPPDSVR*SQLTCQDPFVK
Trigger: TTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGTCCATTGTGCTGGATaGAAAGATCAATCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSVHCAG*KDQSPV
Trigger: CACTGGTGATTGATCTTTTCATCCAGCACAATGGAC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR TCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTAGCCCAGCCTCTCGATaGGGAGCGGTGGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVSPASR*GAVGGT
Trigger: TGTTCCTCCCACCGCTCCTCATCGAGAGGCTGGGCT...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGAGGTATGTGCACTGTaGAGACCACAGCGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVEVCAL*RPQRGG
Trigger: GCCGCCCCGCTGTGGTCTGCACAGTGCACATACCTC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTCACACACCGGATGACTaGAATATGAGGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSHTPDD*NMRKKM
Trigger: CATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTG...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCGGACCAGAAAGGTACTaGTTTCTTCTCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVGPERY*FLLSFT
Trigger: AGTGAAGGAGAGAAGAAATCAGTACCTTTCTGGTCC...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTCCTCGCTGTACAGGCTaGTCTGCAGGCTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVPRCTG*SAGSAD
Trigger: GTCTGCAGAGCCTGCAGAGCAGCCTGTACAGCGAGG...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTCGTACAGCACAGCCCTaGCCGTGTACTGCGAGACCT +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVRTAQP*PCTARP
Trigger: AGGTCTCGCAGTACACGGGCAGGGCTGTGCTGTACG...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGCGGTGGGAGGAACATaGAGGACAGGAGCATGCCTC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVAVGGT*RTGACL
Trigger: GAGGCATGCTCCTGTCCTCCATGTTCCTCCCACCGC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGCAGTAGGGCAATCATaGAGGACACGTGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVAVGQS*RTRGSP
Trigger: CGGTGACCCACGTGTCCTGCATGATTGCCCTACTGC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTCTCGATGAGGAGCGGTaGGAGGAACATGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVLDEER*EEHGGQ
Trigger: CTGTCCTCCATGTTCCTCCCACCGCTCCTCATCGAG...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCACACACCGGATGACTaGAATATGAGGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFHTPDD*NMRKKM
Trigger: CATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTAAGTCGACAGTAAAGTaGACCAGAAAGGTACTGATT +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSKSTVK*TRKVLI
Trigger: AATCAGTACCTTTCTGGTCCACTTTACTGTCGACTT...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTTATCTCTATATAGCTTaGAAGTCGACAGTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GILSPSLALSPPDSVRLSYLYIA*KSTVKW
Trigger: CCACTTTACTGTCGACTTTCAAGCTATATAGAGATA...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGGCTTTGTCACCCCCTaGCTCTGTGAGGTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVGFVTP*LCEVES
Trigger: TGACTCAACCTCACAGAGTCAGGGGGTGACAAAGCC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCGACTTCTGTCCATTGTaGTGGATGAAAAGATCAATC +
Preference number: 4 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVDFCPL*WMKRSI
Trigger: GATTGATCTTTTCATCCAGCACAATGGACAGAAGTC...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTAGCACAGCGCGTCAGTaGCCGAGAAGCAGATCATCA +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVSTARQ*PRSRSS
Trigger: TGATGATCTGCTTCTCGGCCACTGACGCGCTGTGCT...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGGTTCACCATGTCTTTaGCACGCTTTCCCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVGSPCL*HAFPPS
Trigger: AGAAGGCGGGAAAGCGTGGCAAAGACATGGTGAACC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGCGATGAGATCAAGTTaGCCCACACACCGGATGACT +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVAMRSS*PTHRMT
Trigger: AGTCATCCGGTGTGTGGGGCAACTTGATCTCATCGC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGAGAGGAATCCTTGCTaGAATCCACTGTACAGCGGC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVERNPC*NPLYSG
Trigger: GCCGCTGTACAGTGGATTGCAGCAAGGATTCCTCTC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGCATTGTTTTGTGTCTaGCAGACGGCATCTGCCACG +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVALFCV*QTASAT
Trigger: CGTGGCAGATGCCGTCTGGCAGACACAAAACAATGC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTTCAAAGTGTACCAGCTaGCGAAGAAGTTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVSKCTS*RRSCPR
Trigger: CCGTGGGCAACTTCTTCGCCAGCTGGTACACTTTGA...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTCCAGCAGTATGGAGGTaGGGATCAAAGTGTACCAGC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVPAVWR*GSKCTS
Trigger: GCTGGTACACTTTGATCCCCACCTCCATACTGCTGG...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGAAGGGTCTCTTGGCTaGGAGTCTGGCCAAATACCA +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVEGSLG*ESGQIP
Trigger: TGGTATTTGGCCAGACTCCCAGCCAAGAGACCCTTC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTAAGTCGACAGTAAAGTaGACCAGAAAGGTACTGATT +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFKSTVK*TRKVLI
Trigger: AATCAGTACCTTTCTGGTCCACTTTACTGTCGACTT...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTAAGAACACTGCCAGATaGTCAGCACGAGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVKNTAR*SARGLH
Trigger: GTGGAGACCTCGTGCTGACCATCTGGCAGTGTTCTT...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCTAAAAGAAACCAATTaGGGCATGGGAAAAACAATC +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFLKETN*GMGKTI
Trigger: GATTGTTTTTCCCATGCCTCAATTGGTTTCTTTTAG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR TCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTAAGATCAATCACCAGTaGACACGTAAATTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFKINHQ*TRKFVA
Trigger: AGCTACAAATTTACGTGTTCACTGGTGATTGATCTT...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR TCA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTTATCTCTATATAGCTTaGAAGTCGACAGTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFYLYIA*KSTVKW
Trigger: CCACTTTACTGTCGACTTTCAAGCTATATAGAGATA...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTCTTTCCCGCCTTCTCTaGATGTGTGTTTCCCGTGAT +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVLSRLL*MCVSRD
Trigger: ATCACGGGAAACACACATGCAGAGAAGGCGGGAAAG...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTCTGGAGAGGAATCCTTaGTGCAATCCACTGTACAGC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVLERNP*CNPLYS
Trigger: GCTGTACAGTGGATTGCAGCAAGGATTCCTCTCCAG...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGAATACGAAGAACACTaGCAGATGGTCAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVEYEEH*QMVSTR
Trigger: CCTCGTGCTGACCATCTGGCAGTGTTCTTCGTATTC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGCTGAACATCTCGTATaGGTTGGAGGAACGCAGCTA +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVAEHLV*VGGTQL
Trigger: TAGCTGCGTTCCTCCAACCCATACGAGATGTTCAGC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTACATCTCGTATGGGTTaGAGGAACGCAGCTATCATC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVTSRMG*RNAAII
Trigger: GATGATAGCTGCGTTCCTCCAACCCATACGAGATGT...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR TCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGGACCAGAAAGGTACTaGTTTCTTCTCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVGPERY*FLLSFT
Trigger: AGTGAAGGAGAGAAGAAATCAGTACCTTTCTGGTCC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR GCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGACTTCTGTCCATTGTaGTGGATGAAAAGATCAATC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVDFCPL*WMKRSI
Trigger: GATTGATCTTTTCATCCAGCACAATGGACAGAAGTC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CCA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTTTCTGTCCATTGTGCTaGATGAAAAGATCAATCACC +
Preference number: 4 (lower is better)
Translates to: CEVESADLSGPLCKMYEVFCPLC*MKRSIT
Trigger: GGTGATTGATCTTTTCATCCAGCACAATGGACAGAA...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 90 bp GCTAGGGACCCTGCCCTGGGCCGATGGAGCTCGTACCAGTGTAGATaGCCAGGAGGGTGTAGACCAGCTGCTGGGAGGGCCTCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: ARDPALGRWSSYQCR*PGGCRPAAGRASGC
Trigger: GCACCCAGAGGCCCTCCCAGCAGCTGGTCTACACCCTCCTGGGCATCTACACTGGTACGAGCTCCATCGGCCCAGGGCAGGGTCCCTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504706.1
CDS GCA 90 bp TGGGTCACCGCGCCCAGCACGTACAGCACAGCCCTGCCCGTGTACTaGGAGACCTTTCCATACAACACGGAGCACAGCGCGTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: WVTAPSTYSTALPVY*ETFPYNTEHSASVA
Trigger: GGCCACTGACGCGCTGTGCTCCGTGTTGTATGGAAAGGTCTCGCAGTACACGGGCAGGGCTGTGCTGTACGTGCTGGGCGCGGTGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 90 bp CTGCCAGATGGTCAGCACGAGGTCTCCACAGCAGTAGGGCAATCATaGAGGACACGTGGGTCACCGCGCCCAGCACGTACAGCACAGCCC +
Preference number: 5 (lower is better)
Translates to: LPDGQHEVSTAVGQS*RTRGSPRPARTAQP
Trigger: GGGCTGTGCTGTACGTGCTGGGCGCGGTGACCCACGTGTCCTGCATGATTGCCCTACTGCTGTGGAGACCTCGTGCTGACCATCTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CCA 90 bp GAGGATGATGGTCCCCTTGCAGCCCAGCCTCTCGATGAGGAGCGGTaGGAGGAACATGGAGGACAGGAGCATGCCTCCATAGAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: EDDGPLAAQPLDEER*EEHGGQEHASIEGA
Trigger: AGCACCCTCTATGGAGGCATGCTCCTGTCCTCCATGTTCCTCCCACCGCTCCTCATCGAGAGGCTGGGCTGCAAGGGGACCATCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000366830.2
ENST00000503433.5
ENST00000504706.1
CDS GCA 90 bp CTTCTCTGCATGTGTGTTTCCCGTGATCGTGAGGTATGTGCACTGTaGAGACCACAGCGGGGCGGCCCCGAGTCCCAGCAGTATGGAGGT +
Preference number: 5 (lower is better)
Translates to: LLCMCVSRDREVCAL*RPQRGGPESQQYGG
Trigger: ACCTCCATACTGCTGGGACTCGGGGCCGCCCCGCTGTGGTCTGCACAGTGCACATACCTCACGATCACGGGAAACACACATGCAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000366830.2
ENST00000503433.5
ENST00000504706.1
CDS GCA 90 bp ATTGGGAGAGACAGTCTTTGTCAGCCCAGGAAGGAGGCTTGGCTCTaGTTTGCTAGGGACCCTGCCCTGGGCCGATGGAGCTCGTACCAG +
Preference number: 5 (lower is better)
Translates to: IGRDSLCQPRKEAWL*FARDPALGRWSSYQ
Trigger: CTGGTACGAGCTCCATCGGCCCAGGGCAGGGTCCCTAGCAAAGCAGAGCCAAGCCTCCTTCCTGGGCTGACAAAGACTGTCTCTCCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504706.1
CDS-3UTR CAA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTAGGATGATGGTCCCCTaGCAGCCCAGCCTCTCGATG +
Preference number: 5 (lower is better)
Translates to: GILSPSLALSPPDSVRLSRMMVP*QPSLSM
Trigger: CATCGAGAGGCTGGGCTGCAAGGGGACCATCATCCT...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGGGTGCTGTTGGTGGTaGTGGTGGCCATCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: GILSPSLALSPPDSVRLSGCCWW*WWPSGS
Trigger: ACTGCCTGATGGCCACCACAACCACCAACAGCACCC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS GCA 90 bp TCTGCACAGCTGAGCCCCGCCCAGAATTGCAATTCCCTCCCTTGCTaGCTAATGACTCCCAGGTGCTTTCCTTCAGGCCTCCTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SAQLSPAQNCNSLPC*LMTPRCFPSGLLLR
Trigger: CCTCAACAGGAGGCCTGAAGGAAAGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAGCTGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS CCA 90 bp TCTGCCACGCCCCACAGGCCAGAGAATACGAAGAACACTGCCAGATaGTCAGCACGAGGTCTCCACAGCAGTAGGGCAATCATGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SATPHRPENTKNTAR*SARGLHSSRAIMQD
Trigger: GTCCTGCATGATTGCCCTACTGCTGTGGAGACCTCGTGCTGACCATCTGGCAGTGTTCTTCGTATTCTCTGGCCTGTGGGGCGTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 90 bp AACTCTGCACAGCTGAGCCCCGCCCAGAATTGCAATTCCCTCCCTTaGTGCCTAATGACTCCCAGGTGCTTTCCTTCAGGCCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: NSAQLSPAQNCNSLP*CLMTPRCFPSGLLL
Trigger: CAACAGGAGGCCTGAAGGAAAGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAGCTGTGCAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS CCA 90 bp TGTACTGCGAGACCTTTCCATACAACACGGAGCACAGCGCGTCAGTaGCCGAGAAGCAGATCATCACGTAGCCGACGAACTGGATGCCCA +
Preference number: 5 (lower is better)
Translates to: CTARPFHTTRSTARQ*PRSRSSRSRRTGCP
Trigger: TGGGCATCCAGTTCGTCGGCTACGTGATGATCTGCTTCTCGGCCACTGACGCGCTGTGCTCCGTGTTGTATGGAAAGGTCTCGCAGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTTGGTTCACCATGTCTTaGCCACGCTTTCCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: GILSPSLALSPPDSVRLSWFTMS*PRFPAF
Trigger: GAAGGCGGGAAAGCGTGGCAAAGACATGGTGAACCA...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTAGCGATGAGATCAAGTaGCCCCACACACCGGATGAC +
Preference number: 5 (lower is better)
Translates to: GILSPSLALSPPDSVRLSSDEIK*PHTPDD
Trigger: GTCATCCGGTGTGTGGGGCAACTTGATCTCATCGCT...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTTTCTGGAAGGGTCTCTaGGCTGGGAGTCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GILSPSLALSPPDSVRLSFWKGL*AGSLAK
Trigger: TTTGGCCAGACTCCCAGCCAAGAGACCCTTCCAGAA...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS GCA 90 bp CAGAACGCCGTAGAGAGCATTGTTTTGTGTCTGCCAGACGGCATCTaGCACGCCCCACAGGCCAGAGAATACGAAGAACACTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: QNAVESIVLCLPDGI*HAPQAREYEEHCQM
Trigger: CATCTGGCAGTGTTCTTCGTATTCTCTGGCCTGTGGGGCGTGGCAGATGCCGTCTGGCAGACACAAAACAATGCTCTCTACGGCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 90 bp CTGGAGACCTTGCTAAACTCTGCACAGCTGAGCCCCGCCCAGAATTaGAATTCCCTCCCTTGCTGCCTAATGACTCCCAGGTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LETLLNSAQLSPAQN*NSLPCCLMTPRCFP
Trigger: AGGAAAGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAGCTGTGCAGAGTTTAGCAAGGTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS-3UTR CAA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTTGGTTCACCATGTCTTaGCCACGCTTTCCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFWFTMS*PRFPAF
Trigger: GAAGGCGGGAAAGCGTGGCAAAGACATGGTGAACCA...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTAGCGATGAGATCAAGTaGCCCCACACACCGGATGAC +
Preference number: 5 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFSDEIK*PHTPDD
Trigger: GTCATCCGGTGTGTGGGGCAACTTGATCTCATCGCT...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTGTAGAGAGCATTGTTTaGTGTCTGCCAGACGGCATC +
Preference number: 5 (lower is better)
Translates to: GILSPSLALSPPDSVRLSVESIV*CLPDGI
Trigger: GATGCCGTCTGGCAGACACAAAACAATGCTCTCTAC...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTAACATCTCGTATGGGTaGGAGGAACGCAGCTATCAT +
Preference number: 5 (lower is better)
Translates to: GILSPSLALSPPDSVRLSNISYG*EERSYH
Trigger: ATGATAGCTGCGTTCCTCCAACCCATACGAGATGTT...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGCTGGAGAGGAATCCTaGCTGCAATCCACTGTACAG +
Preference number: 5 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFAGEES*LQSTVQ
Trigger: CTGTACAGTGGATTGCAGCAAGGATTCCTCTCCAGC...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp AGAAACGCAGACCCCACACGTTTCAGGAATCCTGAGCCCCAGTCTGGCTTTGTCGTAGAGAGCATTGTTTaGTGTCTGCCAGACGGCATC +
Preference number: 5 (lower is better)
Translates to: RNADPTRFRNPEPQSGFVVESIV*CLPDGI
Trigger: GATGCCGTCTGGCAGACACAAAACAATGCTCTCTAC...GACAAAGCCAGACTGGGGCTCAGGATTCCTGAAACGTGTGGGGTCTGCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS-3UTR CAA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTCAGCTGGCGAAGAAGTaGCCCACGGAGAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: CEVESADLSGPLCKMYEVQLAKK*PTEKAT
Trigger: CGTGGCCTTCTCCGTGGGCAACTTCTTCGCCAGCTG...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTAGGATGATGGTCCCCTaGCAGCCCAGCCTCTCGATG +
Preference number: 5 (lower is better)
Translates to: CEVESADLSGPLCKMYEVRMMVP*QPSLSM
Trigger: CATCGAGAGGCTGGGCTGCAAGGGGACCATCATCCT...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTAACATCTCGTATGGGTaGGAGGAACGCAGCTATCAT +
Preference number: 5 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFNISYG*EERSYH
Trigger: ATGATAGCTGCGTTCCTCCAACCCATACGAGATGTT...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTTGAGTCAGCTGACTaGTCAGGACCCCTTTGTAAA +
Preference number: 5 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFVESAD*SGPLCK
Trigger: TTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAAC...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS-3UTR CAA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTCAGGACACCACTCCCTaGGCTGGGAGTCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: CEVESADLSGPLCKMYEVQDTTP*AGSLAK
Trigger: TTTGGCCAGACTCCCAGCCAAGGGAGTGGTGTCCTG...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366829.2
CDS GCA 90 bp AAAATACTGGTTCACCATGTCTTTGCCACGCTTTCCCGCCTTCTCTaGATGTGTGTTTCCCGTGATCGTGAGGTATGTGCACTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: KILVHHVFATLSRLL*MCVSRDREVCALCR
Trigger: TCTGCACAGTGCACATACCTCACGATCACGGGAAACACACATGCAGAGAAGGCGGGAAAGCGTGGCAAAGACATGGTGAACCAGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000366830.2
ENST00000503433.5
ENST00000504706.1
CDS-3UTR CAA 90 bp GGAATCCTGAGCCCCAGTCTGGCTTTGTCACCCCCTGACTCTGTGAGGTTGAGTTTAGACTTCTGTCCATaGTGCTGGATGAAAAGATCA +
Preference number: 5 (lower is better)
Translates to: GILSPSLALSPPDSVRLSLDFCP*CWMKRS
Trigger: TGATCTTTTCATCCAGCACAATGGACAGAAGTCTAA...ACTCAACCTCACAGAGTCAGGGGGTGACAAAGCCAGACTGGGGCTCAGGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS TCA 90 bp CCAGCGATGAGATCAAGTTGCCCCACACACCGGATGACTGGAATATaGGGAAGAAGATGCCAAAATACTGGTTCACCATGTCTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: PAMRSSCPTHRMTGI*GRRCQNTGSPCLCH
Trigger: GTGGCAAAGACATGGTGAACCAGTATTTTGGCATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTGGGGCAACTTGATCTCATCGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000504706.1
CDS CCA 90 bp CACACACCGGATGACTGGAATATGAGGAAGAAGATGCCAAAATACTaGTTCACCATGTCTTTGCCACGCTTTCCCGCCTTCTCTGCATGT +
Preference number: 5 (lower is better)
Translates to: HTPDDWNMRKKMPKY*FTMSLPRFPAFSAC
Trigger: ACATGCAGAGAAGGCGGGAAAGCGTGGCAAAGACATGGTGAACCAGTATTTTGGCATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000504706.1
CDS-3UTR CAA 90 bp TGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTGTAAAATGTATGAGGTTGCTGGAGAGGAATCCTaGCTGCAATCCACTGTACAG +
Preference number: 5 (lower is better)
Translates to: CEVESADLSGPLCKMYEVAGEES*LQSTVQ
Trigger: CTGTACAGTGGATTGCAGCAAGGATTCCTCTCCAGC...AACCTCATACATTTTACAAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CCA 90 bp CCAAATACCAGCGATGAGATCAAGTTGCCCCACACACCGGATGACTaGAATATGAGGAAGAAGATGCCAAAATACTGGTTCACCATGTCT +
Preference number: 5 (lower is better)
Translates to: PNTSDEIKLPHTPDD*NMRKKMPKYWFTMS
Trigger: AGACATGGTGAACCAGTATTTTGGCATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTGGGGCAACTTGATCTCATCGCTGGTATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000504706.1
CDS-3UTR CAA 90 bp TTGTCACCCCCTGACTCTGTGAGGTTGAGTCAGCTGACTTGTCAGGACCCCTTTCCTAAAAGAAACCAATaGAGGCATGGGAAAAACAAT +
Preference number: 5 (lower is better)
Translates to: LSPPDSVRLSQLTCQDPFPKRNQ*RHGKNN
Trigger: ATTGTTTTTCCCATGCCTCAATTGGTTTCTTTTAGG...AAAGGGGTCCTGACAAGTCAGCTGACTCAACCTCACAGAGTCAGGGGGTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000230256.8
CDS TCA 90 bp GCGGCAGCAGAATTAAGAGGCACAGACGTTTATCTCTATATAGCTTaGAAGTCGACAGTAAAGTGGACCAGAAAGGTACTGATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: AAAELRGTDVYLYIA*KSTVKWTRKVLISS
Trigger: AGAAGAAATCAGTACCTTTCTGGTCCACTTTACTGTCGACTTTCAAGCTATATAGAGATAAACGTCTGTGCCTCTTAATTCTGCTGCCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 72 bp GCGCCCAGCACGTACAGCACAGCCCTGCCCGTGTACTaGGAGACCTTTCCATACAACACGGAGCACAGCGCG +
Preference number: 6 (lower is better)
Translates to: APSTYSTALPVY*ETFPYNTEHSA
Trigger: CGCGCTGTGCTCCGTGTTGTATGGAAAGGTCTCGCAGTACACGGGCAGGGCTGTGCTGTACGTGCTGGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 72 bp CGTGGGTCACCGCGCCCAGCACGTACAGCACAGCCCTaGCCGTGTACTGCGAGACCTTTCCATACAACACGG +
Preference number: 6 (lower is better)
Translates to: RGSPRPARTAQP*PCTARPFHTTR
Trigger: CCGTGTTGTATGGAAAGGTCTCGCAGTACACGGGCAGGGCTGTGCTGTACGTGCTGGGCGCGGTGACCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CCA 72 bp GGTCTCCACAGCAGTAGGGCAATCATGCAGGACACGTaGGTCACCGCGCCCAGCACGTACAGCACAGCCCTG +
Preference number: 6 (lower is better)
Translates to: GLHSSRAIMQDT*VTAPSTYSTAL
Trigger: CAGGGCTGTGCTGTACGTGCTGGGCGCGGTGACCCACGTGTCCTGCATGATTGCCCTACTGCTGTGGAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 72 bp ATGTGTGTTTCCCGTGATCGTGAGGTATGTGCACTGTaGAGACCACAGCGGGGCGGCCCCGAGTCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: MCVSRDREVCAL*RPQRGGPESQQ
Trigger: CTGCTGGGACTCGGGGCCGCCCCGCTGTGGTCTGCACAGTGCACATACCTCACGATCACGGGAAACACACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000366830.2
ENST00000503433.5
ENST00000504706.1
CDS GCA 72 bp GGTCAGCACGAGGTCTCCACAGCAGTAGGGCAATCATaGAGGACACGTGGGTCACCGCGCCCAGCACGTACA +
Preference number: 6 (lower is better)
Translates to: GQHEVSTAVGQS*RTRGSPRPART
Trigger: TGTACGTGCTGGGCGCGGTGACCCACGTGTCCTGCATGATTGCCCTACTGCTGTGGAGACCTCGTGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 72 bp GACAGTCTTTGTCAGCCCAGGAAGGAGGCTTGGCTCTaGTTTGCTAGGGACCCTGCCCTGGGCCGATGGAGC +
Preference number: 6 (lower is better)
Translates to: DSLCQPRKEAWL*FARDPALGRWS
Trigger: GCTCCATCGGCCCAGGGCAGGGTCCCTAGCAAAGCAGAGCCAAGCCTCCTTCCTGGGCTGACAAAGACTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504706.1
CDS CCA 72 bp ACAGCGGGGCGGCCCCGAGTCCCAGCAGTATGGAGGTaGGGATCAAAGTGTACCAGCTGGCGAAGAAGTTGC +
Preference number: 6 (lower is better)
Translates to: TAGRPRVPAVWR*GSKCTSWRRSC
Trigger: GCAACTTCTTCGCCAGCTGGTACACTTTGATCCCCACCTCCATACTGCTGGGACTCGGGGCCGCCCCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000366830.2
ENST00000503433.5
ENST00000504706.1
CDS CCA 72 bp AGGAGGCTTGGCTCTGCTTTGCTAGGGACCCTGCCCTaGGCCGATGGAGCTCGTACCAGTGTAGATGCCCAG +
Preference number: 6 (lower is better)
Translates to: RRLGSALLGTLP*ADGARTSVDAQ
Trigger: CTGGGCATCTACACTGGTACGAGCTCCATCGGCCCAGGGCAGGGTCCCTAGCAAAGCAGAGCCAAGCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504706.1
CDS CAA 72 bp GTCTTTGTCAGCCCAGGAAGGAGGCTTGGCTCTGCTTaGCTAGGGACCCTGCCCTGGGCCGATGGAGCTCGT +
Preference number: 6 (lower is better)
Translates to: VFVSPGRRLGSA*LGTLPWADGAR
Trigger: ACGAGCTCCATCGGCCCAGGGCAGGGTCCCTAGCAAAGCAGAGCCAAGCCTCCTTCCTGGGCTGACAAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504706.1
CDS CAA 90 bp GGAGAGACAGTCTTTGTCAGCCCAGGAAGGAGGCTTGGCTCTGCTTaGCTAGGGACCCTGCCCTGGGCCGATGGAGCTCGTACCAGTGTA +
Preference number: 6 (lower is better)
Translates to: GETVFVSPGRRLGSA*LGTLPWADGARTSV
Trigger: TACACTGGTACGAGCTCCATCGGCCCAGGGCAGGGTCCCTAGCAAAGCAGAGCCAAGCCTCCTTCCTGGGCTGACAAAGACTGTCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504706.1
CDS GCA 72 bp CTGAGCCCCGCCCAGAATTGCAATTCCCTCCCTTGCTaGCTAATGACTCCCAGGTGCTTTCCTTCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: LSPAQNCNSLPC*LMTPRCFPSGL
Trigger: GAGGCCTGAAGGAAAGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS GCA 72 bp CAGCTGAGCCCCGCCCAGAATTGCAATTCCCTCCCTTaGTGCCTAATGACTCCCAGGTGCTTTCCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: QLSPAQNCNSLP*CLMTPRCFPSG
Trigger: GCCTGAAGGAAAGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS CCA 72 bp AGGACAGCCAGGACACCACTCCCTTGGCTGGGAGTCTaGCCAAATACCAGCGATGAGATCAAGTTGCCCCAC +
Preference number: 6 (lower is better)
Translates to: RTARTPLPWLGV*PNTSDEIKLPH
Trigger: GTGGGGCAACTTGATCTCATCGCTGGTATTTGGCCAGACTCCCAGCCAAGGGAGTGGTGTCCTGGCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366829.2
CDS CAA 90 bp CCTGGAGACCTTGCTAAACTCTGCACAGCTGAGCCCCGCCCAGAATaGCAATTCCCTCCCTTGCTGCCTAATGACTCCCAGGTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: PGDLAKLCTAEPRPE*QFPPLLPNDSQVLS
Trigger: GGAAAGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAGCTGTGCAGAGTTTAGCAAGGTCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS GCA 72 bp CCCTCAGCAGAAGCACCTGGAGACCTTGCTAAACTCTaGACAGCTGAGCCCCGCCCAGAATTGCAATTCCCT +
Preference number: 6 (lower is better)
Translates to: PSAEAPGDLAKL*TAEPRPELQFP
Trigger: AGGGAATTGCAATTCTGGGCGGGGCTCAGCTGTGCAGAGTTTAGCAAGGTCTCCAGGTGCTTCTGCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS CCA 72 bp CCCCACAGGCCAGAGAATACGAAGAACACTGCCAGATaGTCAGCACGAGGTCTCCACAGCAGTAGGGCAATC +
Preference number: 6 (lower is better)
Translates to: PHRPENTKNTAR*SARGLHSSRAI
Trigger: GATTGCCCTACTGCTGTGGAGACCTCGTGCTGACCATCTGGCAGTGTTCTTCGTATTCTCTGGCCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CAA 72 bp ACAGCTGAGCCCCGCCCAGAATTGCAATTCCCTCCCTaGCTGCCTAATGACTCCCAGGTGCTTTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: TAEPRPELQFPP*LPNDSQVLSFR
Trigger: CCTGAAGGAAAGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS CAA 72 bp CTTAACTCTGGCCCTCAGCAGAAGCACCTGGAGACCTaGCTAAACTCTGCACAGCTGAGCCCCGCCCAGAAT +
Preference number: 6 (lower is better)
Translates to: LNSGPQQKHLET*LNSAQLSPAQN
Trigger: ATTCTGGGCGGGGCTCAGCTGTGCAGAGTTTAGCAAGGTCTCCAGGTGCTTCTGCTGAGGGCCAGAGTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS CAA 90 bp AAACTCTGCACAGCTGAGCCCCGCCCAGAATTGCAATTCCCTCCCTaGCTGCCTAATGACTCCCAGGTGCTTTCCTTCAGGCCTCCTGTT +
Preference number: 6 (lower is better)
Translates to: KLCTAEPRPELQFPP*LPNDSQVLSFRPPV
Trigger: AACAGGAGGCCTGAAGGAAAGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAGCTGTGCAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS GCA 72 bp TTGCTAAACTCTGCACAGCTGAGCCCCGCCCAGAATTaGAATTCCCTCCCTTGCTGCCTAATGACTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LLNSAQLSPAQN*NSLPCCLMTPR
Trigger: CCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCAATTCTGGGCGGGGCTCAGCTGTGCAGAGTTTAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS CCA 72 bp AGACCTTTCCATACAACACGGAGCACAGCGCGTCAGTaGCCGAGAAGCAGATCATCACGTAGCCGACGAACT +
Preference number: 6 (lower is better)
Translates to: RPFHTTRSTARQ*PRSRSSRSRRT
Trigger: AGTTCGTCGGCTACGTGATGATCTGCTTCTCGGCCACTGACGCGCTGTGCTCCGTGTTGTATGGAAAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS GCA 72 bp GTAGAGAGCATTGTTTTGTGTCTGCCAGACGGCATCTaGCACGCCCCACAGGCCAGAGAATACGAAGAACAC +
Preference number: 6 (lower is better)
Translates to: VESIVLCLPDGI*HAPQAREYEEH
Trigger: GTGTTCTTCGTATTCTCTGGCCTGTGGGGCGTGGCAGATGCCGTCTGGCAGACACAAAACAATGCTCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CAA 72 bp CTCTCCTTCACTTTCCCGCTGAACATCTCGTATGGGTaGGAGGAACGCAGCTATCATCAGGACAGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: LSFTFPLNISYG*EERSYHQDSQD
Trigger: GTCCTGGCTGTCCTGATGATAGCTGCGTTCCTCCAACCCATACGAGATGTTCAGCGGGAAAGTGAAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CAA 90 bp CTCCCTTGGCTGGGAGTCTGGCCAAATACCAGCGATGAGATCAAGTaGCCCCACACACCGGATGACTGGAATATGAGGAAGAAGATGCCA +
Preference number: 6 (lower is better)
Translates to: LPWLGVWPNTSDEIK*PHTPDDWNMRKKMP
Trigger: TGGCATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTGGGGCAACTTGATCTCATCGCTGGTATTTGGCCAGACTCCCAGCCAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366829.2
CDS GCA 72 bp GTTCACCATGTCTTTGCCACGCTTTCCCGCCTTCTCTaGATGTGTGTTTCCCGTGATCGTGAGGTATGTGCA +
Preference number: 6 (lower is better)
Translates to: VHHVFATLSRLL*MCVSRDREVCA
Trigger: TGCACATACCTCACGATCACGGGAAACACACATGCAGAGAAGGCGGGAAAGCGTGGCAAAGACATGGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000366830.2
ENST00000503433.5
ENST00000504706.1
CDS CAA 72 bp CTGGGAGTCTGGCCAAATACCAGCGATGAGATCAAGTaGCCCCACACACCGGATGACTGGAATATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LGVWPNTSDEIK*PHTPDDWNMRK
Trigger: CTTCCTCATATTCCAGTCATCCGGTGTGTGGGGCAACTTGATCTCATCGCTGGTATTTGGCCAGACTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000504706.1
CDS CAA 90 bp GTCTCTTGGCTGGGAGTCTGGCCAAATACCAGCGATGAGATCAAGTaGCCCCACACACCGGATGACTGGAATATGAGGAAGAAGATGCCA +
Preference number: 6 (lower is better)
Translates to: VSWLGVWPNTSDEIK*PHTPDDWNMRKKMP
Trigger: TGGCATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTGGGGCAACTTGATCTCATCGCTGGTATTTGGCCAGACTCCCAGCCAAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000504706.1
CDS CCA 72 bp TCTTCTCTCCTTCACTTTCCCGCTGAACATCTCGTATaGGTTGGAGGAACGCAGCTATCATCAGGACAGCCA +
Preference number: 6 (lower is better)
Translates to: SSLLHFPAEHLV*VGGTQLSSGQP
Trigger: TGGCTGTCCTGATGATAGCTGCGTTCCTCCAACCCATACGAGATGTTCAGCGGGAAAGTGAAGGAGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CCA 72 bp ACAACCACAGTGCTTAATGGCTGCTGTGTTGGGCTCTaGAGATGTATAACAATCTCATCACCCCAGGATCCT +
Preference number: 6 (lower is better)
Translates to: TTTVLNGCCVGL*RCITISSPQDP
Trigger: AGGATCCTGGGGTGATGAGATTGTTATACATCTCCAGAGCCCAACACAGCAGCCATTAAGCACTGTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504706.1
CDS CAA 72 bp GAAGAGAGATTACTTTTACATTGGGAGAGACAGTCTTaGTCAGCCCAGGAAGGAGGCTTGGCTCTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: EERLLLHWERQS*SAQEGGLALLC
Trigger: GCAAAGCAGAGCCAAGCCTCCTTCCTGGGCTGACAAAGACTGTCTCTCCCAATGTAAAAGTAATCTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504706.1
CDS CAA 90 bp TGGAATATGAGGAAGAAGATGCCAAAATACTGGTTCACCATGTCTTaGCCACGCTTTCCCGCCTTCTCTGCATGTGTGTTTCCCGTGATC +
Preference number: 6 (lower is better)
Translates to: WNMRKKMPKYWFTMS*PRFPAFSACVFPVI
Trigger: GATCACGGGAAACACACATGCAGAGAAGGCGGGAAAGCGTGGCAAAGACATGGTGAACCAGTATTTTGGCATCTTCTTCCTCATATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000504706.1
CDS TCA 72 bp AAAGGTACTGATTTCTTCTCTCCTTCACTTTCCCGCTaGACATCTCGTATGGGTTGGAGGAACGCAGCTATC +
Preference number: 6 (lower is better)
Translates to: KGTDFFSPSLSR*TSRMGWRNAAI
Trigger: GATAGCTGCGTTCCTCCAACCCATACGAGATGTTCAGCGGGAAAGTGAAGGAGAGAAGAAATCAGTACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CCA 72 bp AGCGATGAGATCAAGTTGCCCCACACACCGGATGACTaGAATATGAGGAAGAAGATGCCAAAATACTGGTTC +
Preference number: 6 (lower is better)
Translates to: SDEIKLPHTPDD*NMRKKMPKYWF
Trigger: GAACCAGTATTTTGGCATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTGGGGCAACTTGATCTCATCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000504706.1
CDS CAA 72 bp AGGAAGAAGATGCCAAAATACTGGTTCACCATGTCTTaGCCACGCTTTCCCGCCTTCTCTGCATGTGTGTTT +
Preference number: 6 (lower is better)
Translates to: RKKMPKYWFTMS*PRFPAFSACVF
Trigger: AAACACACATGCAGAGAAGGCGGGAAAGCGTGGCAAAGACATGGTGAACCAGTATTTTGGCATCTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000366830.2
ENST00000503433.5
ENST00000504706.1
CDS TCA 72 bp AGATCAAGTTGCCCCACACACCGGATGACTGGAATATaGGGAAGAAGATGCCAAAATACTGGTTCACCATGT +
Preference number: 6 (lower is better)
Translates to: RSSCPTHRMTGI*GRRCQNTGSPC
Trigger: ACATGGTGAACCAGTATTTTGGCATCTTCTTCCTCATATTCCAGTCATCCGGTGTGTGGGGCAACTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366829.2
ENST00000504706.1
CDS TCA 72 bp CTGTCCATTGTGCTGGATGAAAAGATCAATCACCAGTaGACACGTAAATTTGTAGCTCCCTGTGCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: LSIVLDEKINHQ*TRKFVAPCAVS
Trigger: GGAAACAGCACAGGGAGCTACAAATTTACGTGTTCACTGGTGATTGATCTTTTCATCCAGCACAATGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503433.5
CDS CAA 72 bp AGGAAACCACAAGGACGTTCCTTAGACTTCTGTCCATaGTGCTGGATGAAAAGATCAATCACCAGTGAACAC +
Preference number: 6 (lower is better)
Translates to: RKPQGRSLDFCP*CWMKRSITSEH
Trigger: GTGTTCACTGGTGATTGATCTTTTCATCCAGCACAATGGACAGAAGTCTAAGGAACGTCCTTGTGGTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366830.2
ENST00000503433.5
CDS CAA 90 bp GGAACCCAAAGGAAACCACAAGGACGTTCCTTAGACTTCTGTCCATaGTGCTGGATGAAAAGATCAATCACCAGTGAACACGTAAATTTG +
Preference number: 6 (lower is better)
Translates to: GTQRKPQGRSLDFCP*CWMKRSITSEHVNL
Trigger: CAAATTTACGTGTTCACTGGTGATTGATCTTTTCATCCAGCACAATGGACAGAAGTCTAAGGAACGTCCTTGTGGTTTCCTTTGGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366830.2
ENST00000503433.5
CDS GCA 72 bp AAACCACAAGGACGTTCCTTAGACTTCTGTCCATTGTaGTGGATGAAAAGATCAATCACCAGTGAACACGTA +
Preference number: 6 (lower is better)
Translates to: KPQGRSLDFCPL*WMKRSITSEHV
Trigger: TACGTGTTCACTGGTGATTGATCTTTTCATCCAGCACAATGGACAGAAGTCTAAGGAACGTCCTTGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366830.2
ENST00000503433.5
CDS CCA 72 bp CCACAAGGACGTTCCTTAGACTTCTGTCCATTGTGCTaGATGAAAAGATCAATCACCAGTGAACACGTAAAT +
Preference number: 6 (lower is better)
Translates to: PQGRSLDFCPLC*MKRSITSEHVN
Trigger: ATTTACGTGTTCACTGGTGATTGATCTTTTCATCCAGCACAATGGACAGAAGTCTAAGGAACGTCCTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230256.8
ENST00000366830.2
ENST00000503433.5
CDS CAA 90 bp AGCGGCAGCAGAATTAAGAGGCACAGACGTTTATCTCTATATAGCTaGAAAGTCGACAGTAAAGTGGACCAGAAAGGTACTGATTTCTTC +
Preference number: 6 (lower is better)
Translates to: SGSRIKRHRRLSLYS*KVDSKVDQKGTDFF
Trigger: GAAGAAATCAGTACCTTTCTGGTCCACTTTACTGTCGACTTTCAAGCTATATAGAGATAAACGTCTGTGCCTCTTAATTCTGCTGCCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS TCA 72 bp GAATTAAGAGGCACAGACGTTTATCTCTATATAGCTTaGAAGTCGACAGTAAAGTGGACCAGAAAGGTACTG +
Preference number: 6 (lower is better)
Translates to: ELRGTDVYLYIA*KSTVKWTRKVL
Trigger: CAGTACCTTTCTGGTCCACTTTACTGTCGACTTTCAAGCTATATAGAGATAAACGTCTGTGCCTCTTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2
CDS CAA 72 bp AGAATTAAGAGGCACAGACGTTTATCTCTATATAGCTaGAAAGTCGACAGTAAAGTGGACCAGAAAGGTACT +
Preference number: 6 (lower is better)
Translates to: RIKRHRRLSLYS*KVDSKVDQKGT
Trigger: AGTACCTTTCTGGTCCACTTTACTGTCGACTTTCAAGCTATATAGAGATAAACGTCTGTGCCTCTTAATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230256.8
ENST00000366829.2