RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC79 (Homo sapiens)

Ensembl gene IDs: ENSG00000133958

Ensembl transcript IDs: ENST00000256339.8, ENST00000393151.6, ENST00000553484.5, ENST00000554549.1, ENST00000555664.5, ENST00000615108.1, ENST00000621021.1, ENST00000627404.2, ENST00000627695.2, ENST00000629205.2, ENST00000629588.2, ENST00000630296.1

Found 1317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGTTAGTCAGTGCATTACAGGGATAAAGAGGAGGAATTTCATTTaGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTG +
Preference number: 1 (lower is better)
Translates to: SVSQCITGIKRRNFI*NAQSNARYRCREIL
Trigger: CAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCTCTTTATCCCTGTAATGCACTGACTAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR GCA 90 bp GGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTaGTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAG +
Preference number: 1 (lower is better)
Translates to: GMHSPTLGIGAEKSW*SYTIKIPFYETSLQ
Trigger: CTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTaGTGCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTC +
Preference number: 1 (lower is better)
Translates to: FGMHSPTLGIGAEKS*CSYTIKIPFYETSL
Trigger: GAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR GCA 90 bp AATATGTGTAGCAAGAAAGCTTCATTTTCGGCCCTCTCTGGCCTTTaGACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATA +
Preference number: 1 (lower is better)
Translates to: NMCSKKASFSALSGL*TSFTKLERECTVPI
Trigger: TATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCAAAGGCCAGAGAGGGCCGAAAATGAAGCTTTCTTGCTACACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
3UTR-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGTGAGGGACTCATCTaGTCCAGTGTGCAAGCTACA +
Preference number: 2 (lower is better)
Translates to: RRNFIWNAQSNARYRCRESEGLI*SSVQAT
Trigger: TGTAGCTTGCACACTGGACCAGATGAGTCCCTCACT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTATTTTCGGCCCTCTCTaGCCTTTGCACATCTTTTAC +
Preference number: 2 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTIFGPL*PLHIFY
Trigger: GTAAAAGATGTGCAAAGGCCAGAGAGGGCCGAAAAT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGCCCTCTCTGGCCTTTaGACATCTTTTACTAAACTA +
Preference number: 2 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCALSGL*TSFTKL
Trigger: TAGTTTAGTAAAAGATGTGCAAAGGCCAGAGAGGGC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCTTTGTAATGTTCCTTaGAAGCTGCCACTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSLCNVP*KLPLFP
Trigger: TGGGAAAAGTGGCAGCTTGCAAGGAACATTACAAAG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATCAGTCAGGTGTCACTaGCTTATGGTGACGGTTTTT +
Preference number: 2 (lower is better)
Translates to: RRNFIWNAQSNARYRCRESVRCH*LMVTVF
Trigger: AAAAACCGTCACCATAAGCCAGTGACACCTGACTGA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATGTTCCTTGCAAGCTaGCACTTTTCCCAGGATAAA +
Preference number: 2 (lower is better)
Translates to: RRNFIWNAQSNARYRCREMFLAS*HFSQDK
Trigger: TTTATCCTGGGAAAAGTGGCAGCTTGCAAGGAACAT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTATACAACTTTTCTGTaGGTACCCACCAGTCTATTT +
Preference number: 2 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCYTTFL*VPTSLF
Trigger: AAATAGACTGGTGGGTACTCACAGAAAAGTTGTATA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCATATGTTCCCCAACCTaGTTGGATCAAATTGTTTGT +
Preference number: 2 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCICSPT*LDQIVC
Trigger: ACAAACAATTTGATCCAAGCAGGTTGGGGAACATAT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGTTCCCCAACCTGCTTaGATCAAATTGTTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTVPQPA*IKLFVF
Trigger: AAAAACAAACAATTTGATCCAAGCAGGTTGGGGAAC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATTTTCGGCCCTCTCTaGCCTTTGCACATCTTTTAC +
Preference number: 2 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKIFGPL*PLHIFY
Trigger: GTAAAAGATGTGCAAAGGCCAGAGAGGGCCGAAAAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
3UTR-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAATATGTTCCCCAACCTaGTTGGATCAAATTGTTTGT +
Preference number: 2 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAICSPT*LDQIVC
Trigger: ACAAACAATTTGATCCAAGCAGGTTGGGGAACATAT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCCCTCTCTGGCCTTTaGACATCTTTTACTAAACTA +
Preference number: 2 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKALSGL*TSFTKL
Trigger: TAGTTTAGTAAAAGATGTGCAAAGGCCAGAGAGGGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
3UTR-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAATTTTCGGCCCTCTCTaGCCTTTGCACATCTTTTAC +
Preference number: 2 (lower is better)
Translates to: THLVQCASYSFQLNCIQVIFGPL*PLHIFY
Trigger: GTAAAAGATGTGCAAAGGCCAGAGAGGGCCGAAAAT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTCAGTCAGGTGTCACTaGCTTATGGTGACGGTTTTT +
Preference number: 2 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSVRCH*LMVTVF
Trigger: AAAAACCGTCACCATAAGCCAGTGACACCTGACTGA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTATGTTCCTTGCAAGCTaGCACTTTTCCCAGGATAAA +
Preference number: 2 (lower is better)
Translates to: TKVVIIKLTREYSLELMSMFLAS*HFSQDK
Trigger: TTTATCCTGGGAAAAGTGGCAGCTTGCAAGGAACAT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCTTTGTAATGTTCCTTaGAAGCTGCCACTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: TKVVIIKLTREYSLELMSLCNVP*KLPLFP
Trigger: TGGGAAAAGTGGCAGCTTGCAAGGAACATTACAAAG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATATGTTCCCCAACCTaGTTGGATCAAATTGTTTGT +
Preference number: 2 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKICSPT*LDQIVC
Trigger: ACAAACAATTTGATCCAAGCAGGTTGGGGAACATAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
3UTR-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTTCCCCAACCTGCTTaGATCAAATTGTTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVPQPA*IKLFVF
Trigger: AAAAACAAACAATTTGATCCAAGCAGGTTGGGGAAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
3UTR-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATATACAACTTTTCTGTaGGTACCCACCAGTCTATTT +
Preference number: 2 (lower is better)
Translates to: THLVQCASYSFQLNCIQVYTTFL*VPTSLF
Trigger: AAATAGACTGGTGGGTACTCACAGAAAAGTTGTATA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR TCA 72 bp ATGAAACATCACTCCAGGTGCAGGGCACTGTGCCAGTaGGGGACTCATCTGGTCCAGTGTGCAAGCTACAGT +
Preference number: 3 (lower is better)
Translates to: MKHHSRCRALCQ*GTHLVQCASYS
Trigger: ACTGTAGCTTGCACACTGGACCAGATGAGTCCCTCACTGGCACAGTGCCCTGCACCTGGAGTGATGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR GCA 72 bp GGCACTGTGCCAGTGAGGGACTCATCTGGTCCAGTGTaGAAGCTACAGTTTTCAATTAAATTGTATACAAGT +
Preference number: 3 (lower is better)
Translates to: GTVPVRDSSGPV*KLQFSIKLYTS
Trigger: ACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGTCCCTCACTGGCACAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR CCA 72 bp CAGTGCATTACAGGGATAAAGAGGAGGAATTTCATTTaGAATGCACAGTCCAACGCTAGGTATAGGTGCAGA +
Preference number: 3 (lower is better)
Translates to: QCITGIKRRNFI*NAQSNARYRCR
Trigger: TCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCTCTTTATCCCTGTAATGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGTTCCCCAACCTGCTaGGATCAAATTGTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRACSPTC*DQIVCF
Trigger: AAAACAAACAATTTGATCCAAGCAGGTTGGGGAACA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR GCA 72 bp AGCAAGAAAGCTTCATTTTCGGCCCTCTCTGGCCTTTaGACATCTTTTACTAAACTAGAAAGAGAATGTACA +
Preference number: 3 (lower is better)
Translates to: SKKASFSALSGL*TSFTKLERECT
Trigger: TGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCAAAGGCCAGAGAGGGCCGAAAATGAAGCTTTCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
3UTR-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGTTCCCCAACCTGCTaGGATCAAATTGTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCSPTC*DQIVCF
Trigger: AAAACAAACAATTTGATCCAAGCAGGTTGGGGAACA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
3UTR-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATGTTCCCCAACCTGCTaGGATCAAATTGTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: THLVQCASYSFQLNCIQVCSPTC*DQIVCF
Trigger: AAAACAAACAATTTGATCCAAGCAGGTTGGGGAACA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAAACAACGAAAACAATaGGCACAGTTTAACCACCTA +
Preference number: 3 (lower is better)
Translates to: TKVVIIKLTREYSLELMSKQRKQ*AQFNHL
Trigger: TAGGTGGTTAAACTGTGCCAATTGTTTTCGTTGTTT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
3UTR-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAAACAACGAAAACAATaGGCACAGTTTAACCACCTA +
Preference number: 3 (lower is better)
Translates to: THLVQCASYSFQLNCIQVKQRKQ*AQFNHL
Trigger: TAGGTGGTTAAACTGTGCCAATTGTTTTCGTTGTTT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGGCCAGCACTGCTCTaGCCCGAGCCCGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRERPALL*PEPGSV
Trigger: GACGCTGCCGGGCTCGGGCCAGAGCAGTGCTGGCCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTATGCAGCGCAGGAACTaGTTGGCCACCCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTMQRRN*LATPAA
Trigger: TGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCAT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTATGCAGCGCAGGAACTaGTTGGCCACCCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSMQRRN*LATPAA
Trigger: TGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCAT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGCGCAGGAACTGCTTaGCCACCCCCGCCGCATTGC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSAGTA*PPPPHC
Trigger: GCAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATTGCGGGCCGCGTTCTaGGGGAGCATCTCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRELRAAF*GSISQD
Trigger: GTCCTGCGAGATGCTCCCTCAGAACGCGGCCCGCAA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGAGCTGTGCTCAGGCTaGGGACGGAGGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREELCSG*GRRDGW
Trigger: CCAGCCATCCCTCCGTCCTCAGCCTGAGCACAGCTC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGTGCCCGGGTCAGGGTaGTCATCCAGCGACATCTCG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTVPGSG*SSSDIS
Trigger: CGAGATGTCGCTGGATGATCACCCTGACCCGGGCAC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCCGTTGGGGGCCAACTaGTGGAAGATGCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSPLGAN*WKMQRR
Trigger: CCTGCGCTGCATCTTCCATCAGTTGGCCCCCAACGG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCGGGCTCGGTGCAGTTaGCTGGGTTCTCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCRARCS*LGSPHA
Trigger: AGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGTTCCACGGGCTCGGTaGAGTTGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCVPRAR*SCLGSP
Trigger: GGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAAC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCCTCCAGGCTGTCTGTaGGCTCCACCAGCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCPPGCL*APPAGF
Trigger: AAAGCCGGCTGGTGGAGCCCACAGACAGCCTGGAGG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGTGCCCGGGTCAGGGTaGTCATCCAGCGACATCTCG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREVPGSG*SSSDIS
Trigger: CGAGATGTCGCTGGATGATCACCCTGACCCGGGCAC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGGGCACACTGCATTGTaGGTGAGGGAACCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTGHTAL*VREPSS
Trigger: GCTGCTGGGTTCCCTCACTCACAATGCAGTGTGCCC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGGGCACTGTGCCAGTaGGGGACTCATCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCRALCQ*GTHLVQ
Trigger: CTGGACCAGATGAGTCCCTCACTGGCACAGTGCCCT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGGGCACTGTGCCAGTaGGGGACTCATCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRALCQ*GTHLVQ
Trigger: CTGGACCAGATGAGTCCCTCACTGGCACAGTGCCCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGAGGAGAGGCCCAGCTaGCGCCGCCGGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAEERPS*RRRFSS
Trigger: TGAGCTGAACCGGCGGCGGCAGCTGGGCCTCTCCTC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGTTCCACGGGCTCGGTaGAGTTGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREVPRAR*SCLGSP
Trigger: GGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAAC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAACCTCCAGGCTGTCTGTaGGCTCCACCAGCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREPPGCL*APPAGF
Trigger: AAAGCCGGCTGGTGGAGCCCACAGACAGCCTGGAGG...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCCCGTGAGATGTCCATaGCTGCAATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCPVRCP*LQSGPA
Trigger: GGCTGGCCCAGATTGCAGCCATGGACATCTCACGGG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCCCGTGAGATGTCCATaGCTGCAATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTPVRCP*LQSGPA
Trigger: GGCTGGCCCAGATTGCAGCCATGGACATCTCACGGG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCCTGGAGGCGAAGCTaGAGTCCCGCAGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSAWRRS*SPADKC
Trigger: GCACTTATCTGCGGGACTCCAGCTTCGCCTCCAGGC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGGCCTTTGCACTGCTaGTGTCTGACTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCRPLHC*CLTQRC
Trigger: GCAGCGCTGAGTCAGACATCAGCAGTGCAAAGGCCT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGACGGTTTTTGCCCCTaGACTTGGCATCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSDGFCP*TWHQLP
Trigger: GGGGAGCTGATGCCAAGTTCAGGGGCAAAAACCGTC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTCGGCTGCTCGTCAGTaGACTCTTCAGGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTSAARQ*TLQVQA
Trigger: TGCCTGCACCTGAAGAGTTCACTGACGAGCAGCCGA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTTCCCACAGACTGCATaGTATCCAGCAGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTFPQTA*YPAAAG
Trigger: CCCCGCTGCTGCTGGATATCATGCAGTCTGTGGGAA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGACCCTCTAGGAGCTaGCTGAGAGCTGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRPSRS*LRAAME
Trigger: CTCCATCGCAGCTCTCAGTCAGCTCCTAGAGGGTCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTACACTGCATTGTGAGTaGGGGAACCCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTTLHCE*GNPAAA
Trigger: GGCTGCTGCTGGGTTCCCTCACTCACAATGCAGTGT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGCTCTGGTAGCCACTaGGGGGTTGACATCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSSSGSH*GVDILH
Trigger: GTGGAGGATGTCAACCCCGCAGTGGCTACCAGAGCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACTGCCAGGCCAGCACTaGTCTGGCCCGAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLPGQH*SGPSPA
Trigger: TGCCGGGCTCGGGCCAGAGCAGTGCTGGCCTGGCAG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGGAAGTGACAGGGCATaGAGGAGAAGAGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSGSDRA*RRRGTA
Trigger: GGCAGTCCCTCTTCTCCTCCATGCCCTGTCACTTCC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGGGAGAGCGCCCTCTTaGATTCCACAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTGRAPS*IPQALS
Trigger: TGAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGGCCAGCACTGCTCTaGCCCGAGCCCGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRPALL*PEPGSV
Trigger: GACGCTGCCGGGCTCGGGCCAGAGCAGTGCTGGCCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCTGCTTCCGAGGACTaGATCTCCACCTGGGCCATT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSAASED*ISTWAI
Trigger: AATGGCCCAGGTGGAGATCCAGTCCTCGGAAGCAGC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGGCAGAGGATTCGGTTaGGACCTTCCTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCGRGFG*DLPSAE
Trigger: CTCAGCTGAAGGAAGGTCTCAACCGAATCCTCTGCC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGAGAGAACTCGGATTTaGCGACCCTCCACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSERTRI*RPSTGL
Trigger: CAAGCCTGTGGAGGGTCGTCAAATCCGAGTTCTCTC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCCAGGGAAGACAGCTaGGAGAACTCGGATTTGACG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSAREDS*ENSDLT
Trigger: CGTCAAATCCGAGTTCTCTCAGCTGTCTTCCCTGGC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGACGGTTTTTGCCCCTaGACTTGGCATCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREDGFCP*TWHQLP
Trigger: GGGGAGCTGATGCCAAGTTCAGGGGCAAAAACCGTC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAACCTCTAGGAGCTGACTaGGAGCTGCGATGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREPLGAD*ELRWSS
Trigger: TGAGCTCCATCGCAGCTCTCAGTCAGCTCCTAGAGG...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGACCCTCTAGGAGCTaGCTGAGAGCTGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRERPSRS*LRAAME
Trigger: CTCCATCGCAGCTCTCAGTCAGCTCCTAGAGGGTCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAACACTGCATTGTGAGTaGGGGAACCCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRETLHCE*GNPAAA
Trigger: GGCTGCTGCTGGGTTCCCTCACTCACAATGCAGTGT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCACAGCTGAGCAAAGATaGACGCGTGGAAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCTAEQR*TRGRGS
Trigger: GCTCCCTCTTCCACGCGTTCATCTTTGCTCAGCTGT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTGGTTCACGTGGTTCTaGATAGCCTGGAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTWFTWF*IAWRRS
Trigger: GCTTCGCCTCCAGGCTATTCAGAACCACGTGAACCA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTGGTTCACGTGGTTCTaGATAGCCTGGAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSWFTWF*IAWRRS
Trigger: GCTTCGCCTCCAGGCTATTCAGAACCACGTGAACCA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCCACCTGGGCCATTTTaGACTGAGTGCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSPPGPF*TECTAT
Trigger: GGTTGCAGTGCACTCAGTTCAAAATGGCCCAGGTGG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCTCACTGTGGTCCCCTaGAATCCTCTCGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTLTVVP*NPLAAF
Trigger: GAATGCAGCGAGAGGATTGCAGGGGACCACAGTGAG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGCCACAGTAAAGCTTaGTCCTGCACAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSHSKA*SCTEEG
Trigger: CCCCTCCTCTGTGCAGGAGCAAGCTTTACTGTGGCT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCTCCCCATGCTTGCTTaGAGGATTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTLPMLA*RILLLL
Trigger: GAGGAGGAGGAGAATCCTGCAAGCAAGCATGGGGAG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCTCCCCATGCTTGCTTaGAGGATTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCLPMLA*RILLLL
Trigger: GAGGAGGAGGAGAATCCTGCAAGCAAGCATGGGGAG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCCTGGGTTCTCCCCATaGTTGCTTGCAGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSPGFSP*LLAGFS
Trigger: GGAGAATCCTGCAAGCAAGCATGGGGAGAACCCAGG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCAGCAGAAGGCATGTaGCAGGGAGTACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSAAEGM*QGVLQQ
Trigger: CTGCTGAAGTACTCCCTGGCACATGCCTTCTGCTGC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCCGTGGCATGGGGCTTaGAGCTATGATACTGCGCAT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCPWHGA*SYDTAH
Trigger: ATGCGCAGTATCATAGCTGCAAGCCCCATGCCACGG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCCGTGGCATGGGGCTTaGAGCTATGATACTGCGCAT +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTPWHGA*SYDTAH
Trigger: ATGCGCAGTATCATAGCTGCAAGCCCCATGCCACGG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAACAGCTGCGGGAAGATaGCGTTGGGGGCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRETAAGR*RWGPTD
Trigger: ATCAGTTGGCCCCCAACGGCATCTTCCCGCAGCTGT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCACACACTCCATCGCTaGAGTCCCACATCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTHTLHR*SPTSRY
Trigger: GTACCTGGATGTGGGACTGCAGCGATGGAGTGTGTG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATGCAACGTGGGAGCCTaGATCCAGAGGAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRECNVGA*IQRNGQ
Trigger: CTGCCCATTCCTCTGGATGCAGGCTCCCACGTTGCA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACTGCCAGGCCAGCACTaGTCTGGCCCGAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVLPGQH*SGPSPA
Trigger: TGCCGGGCTCGGGCCAGAGCAGTGCTGGCCTGGCAG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTGCCAGGCCAGCACTaGTCTGGCCCGAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLPGQH*SGPSPA
Trigger: TGCCGGGCTCGGGCCAGAGCAGTGCTGGCCTGGCAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGAGCTGGAGCAGACTaGTCATGCCTGGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRAGAD*SCLVNL
Trigger: GAGGTTGACCAGGCATGAGCAGTCTGCTCCAGCTCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTTATCCAGGGAATGGTaGGAAGAGGAGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCLSREW*EEERPS
Trigger: GCTGGGCCTCTCCTCTTCCCACCATTCCCTGGATAA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGCATTATCCAGGGAATaGTGGGAAGAGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTALSRE*WEEERP
Trigger: GGGCCTCTCCTCTTCCCACCATTCCCTGGATAATGC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAACTCGGTGCAGTTGCCTaGGTTCTCCCCATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRELGAVA*VLPMLA
Trigger: AGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAG...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTTGCTTCAGCGTCAGTaGGCTACCGCAGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCLLQRQ*ATAGEL
Trigger: GAGTTCTCCTGCGGTAGCCCACTGACGCTGAAGCAA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTACCTCTCATCCTCAATaGCTGTCCCTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTTSHPQ*LSLQVR
Trigger: CCTGACCTGGAGGGACAGCCATTGAGGATGAGAGGT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCACCTCTCATCCTCAATaGCTGTCCCTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCTSHPQ*LSLQVR
Trigger: CCTGACCTGGAGGGACAGCCATTGAGGATGAGAGGT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCCATGGCTGCAATCTaGGCCAGCCCCACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSMAAI*ASPTLR
Trigger: TCTCAAAGTGGGGCTGGCCCAGATTGCAGCCATGGA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGCCAGCACTGCTCTaGCCCGAGCCCGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRPALL*PEPGSV
Trigger: GACGCTGCCGGGCTCGGGCCAGAGCAGTGCTGGCCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAGGCCAGCACTGCTCTaGCCCGAGCCCGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSRPALL*PEPGSV
Trigger: GACGCTGCCGGGCTCGGGCCAGAGCAGTGCTGGCCT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATGTCCCACCGAGAGCTaGAGCAGACTGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRECPTES*SRLLMP
Trigger: AGGCATGAGCAGTCTGCTCCAGCTCTCGGTGGGACA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTGCGGGCCGCGTTCTaGGGGAGCATCTCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLRAAF*GSISQD
Trigger: GTCCTGCGAGATGCTCCCTCAGAACGCGGCCCGCAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAACAGGCCTGTTTCCGTaGCGACCACAGCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRATGLFP*RPQHPA
Trigger: AGCAGGGTGCTGTGGTCGTCACGGAAACAGGCCTGT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAAGATGTCAGCACCATaGGGAAGTGACAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTKMSAP*GSDRAW
Trigger: CCATGCCCTGTCACTTCCTCATGGTGCTGACATCTT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCACTCTCGACTATTCTaGGAGGGGGAAGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSHSRLF*EGEEAQ
Trigger: TTGAGCCTCTTCCCCCTCTCAGAATAGTCGAGAGTG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCACTCTCGACTATTCTaGGAGGGGGAAGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTHSRLF*EGEEAQ
Trigger: TTGAGCCTCTTCCCCCTCTCAGAATAGTCGAGAGTG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGAGCTGTGCTCAGGCTaGGGACGGAGGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKELCSG*GRRDGW
Trigger: CCAGCCATCCCTCCGTCCTCAGCCTGAGCACAGCTC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGAGCTGTGCTCAGGCTaGGGACGGAGGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLELCSG*GRRDGW
Trigger: CCAGCCATCCCTCCGTCCTCAGCCTGAGCACAGCTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCATCTTCGGGAACTTTaGGGAGGACGGTTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTHLREL*GGRFLP
Trigger: GGGCAAAAACCGTCCTCCTCAAAGTTCCCGAAGATG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAACAGCTGAGCAAAGATaGACGCGTGGAAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRETAEQR*TRGRGS
Trigger: GCTCCCTCTTCCACGCGTTCATCTTTGCTCAGCTGT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTTATGGGCCATTAGCTaGAGGATGCTGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTLWAIS*RMLGVT
Trigger: GGTGACACCCAGCATCCTTCAGCTAATGGCCCATAA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGAGGAGAGGCCCAGCTaGCGCCGCCGGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPEERPS*RRRFSS
Trigger: TGAGCTGAACCGGCGGCGGCAGCTGGGCCTCTCCTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGAGGAGAGGCCCAGCTaGCGCCGCCGGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVEERPS*RRRFSS
Trigger: TGAGCTGAACCGGCGGCGGCAGCTGGGCCTCTCCTC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGCCACAGTAAAGCTTaGTCCTGCACAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRESHSKA*SCTEEG
Trigger: CCCCTCCTCTGTGCAGGAGCAAGCTTTACTGTGGCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATGCAGCGCAGGAACTaGTTGGCCACCCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKMQRRN*LATPAA
Trigger: TGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCCAACTGATGGAAGATaGAGCGCAGGAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCPTDGR*SAGTAW
Trigger: CCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGGCATTTGGGCACACTaGATTGTGAGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSGIWAH*IVSEGT
Trigger: GGTTCCCTCACTCACAATGCAGTGTGCCCAAATGCC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGGAGCAGACTGCTCATaGCTGGTCAACCTCATAGGA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSGADCS*LVNLIG
Trigger: TCCTATGAGGTTGACCAGGCATGAGCAGTCTGCTCC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGGAGCAGACTGCTCATaGCTGGTCAACCTCATAGGA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCGADCS*LVNLIG
Trigger: TCCTATGAGGTTGACCAGGCATGAGCAGTCTGCTCC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGAGCTGGAGCAGACTaGTCATGCCTGGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRERAGAD*SCLVNL
Trigger: GAGGTTGACCAGGCATGAGCAGTCTGCTCCAGCTCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAACCACTGAAACACCATaGCCACCAGCCGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRATTETP*PPAGPS
Trigger: GCTTGGCCCGGCTGGTGGCCATGGTGTTTCAGTGGT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCAGGCTGGATTTGGTaGCACCTCTCATCCTCAATG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSAGWIW*HLSSSM
Trigger: CATTGAGGATGAGAGGTGCCACCAAATCCAGCCTGC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGTGCTGATAGCAGGCTaGATTTGGTGGCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCVLIAG*IWWHLS
Trigger: TGAGAGGTGCCACCAAATCCAGCCTGCTATCAGCAC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCATGGCCCCACAGTCATaGCATTTGTCCGTCATCACC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCMAPQS*HLSVIT
Trigger: GGTGATGACGGACAAATGCCATGACTGTGGGGCCAT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTATGGCCCCACAGTCATaGCATTTGTCCGTCATCACC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTMAPQS*HLSVIT
Trigger: GGTGATGACGGACAAATGCCATGACTGTGGGGCCAT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGCGCAGGAACTGCTTaGCCACCCCCGCCGCATTGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSAGTA*PPPPHC
Trigger: GCAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGCAAAGATGAACGCGTaGAAGAGGGAGCACATGTGC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTAKMNA*KREHMC
Trigger: GCACATGTGCTCCCTCTTCCACGCGTTCATCTTTGC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCCGCTTTGGTGGACATaGTGCTGTCCAGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCPLWWT*CCPVGK
Trigger: CTTTCCAACTGGACAGCACCATGTCCACCAAAGCGG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTTGCGGGCCGCGTTCTaGGGGAGCATCTCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSLRAAF*GSISQD
Trigger: GTCCTGCGAGATGCTCCCTCAGAACGCGGCCCGCAA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCGCATTCCCGCGTGTTaGTGGGCGGAGGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRIPAC*WAEERS
Trigger: AGACCTCTCCTCCGCCCATCAACACGCGGGAATGCG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACGCATTCCCGCGTGTTaGTGGGCGGAGGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRIPAC*WAEERS
Trigger: AGACCTCTCCTCCGCCCATCAACACGCGGGAATGCG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCTAAGCATATTGTGCTaGACTCGTCGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCLSILC*TRRPGS
Trigger: TGATCCTGGCCGACGAGTTCAGCACAATATGCTTAG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAACTGGGAGCAGGTCCTTaGTGGTGTTGTCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRELGAGP*WCCHSQ
Trigger: CTGAGAATGACAACACCATCAAGGACCTGCTCCCAG...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAGGCCTTTGCACTGCTaGTGTCTGACTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRARPLHC*CLTQRC
Trigger: GCAGCGCTGAGTCAGACATCAGCAGTGCAAAGGCCT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGCAGCAGGATCTTGCTaGTATCACAGTCTCGGTATG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTAAGSC*YHSLGM
Trigger: CATACCGAGACTGTGATATCAGCAAGATCCTGCTGC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGAGCTGTGCTCAGGCTaGGGACGGAGGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPELCSG*GRRDGW
Trigger: CCAGCCATCCCTCCGTCCTCAGCCTGAGCACAGCTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTGCCCGGGTCAGGGTaGTCATCCAGCGACATCTCG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVPGSG*SSSDIS
Trigger: CGAGATGTCGCTGGATGATCACCCTGACCCGGGCAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATCGGCTGCTCGTCAGTaGACTCTTCAGGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRASAARQ*TLQVQA
Trigger: TGCCTGCACCTGAAGAGTTCACTGACGAGCAGCCGA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAAAATCTGTGTCGTGTaGGCTCCCTCGCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAKICVV*APSLRQ
Trigger: CTGGCGGAGCGAGGGAGCTCACACGACACAGATTTT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTTCCAAGCTGTGTACTaGAACCCCCTGTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTFQAVY*NPLYSL
Trigger: AAGCGAGTACAGGGGGTTGCAGTACACAGCTTGGAA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGCTCATGTTCTCGCTaGTCAGCATGGAACTCGGCT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRESSCSR*SAWNSA
Trigger: AGCCGAGTTCCATGCTGAGCAGCGAGAACATGAGCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGTAAAGCTTGCTCCTaGACAGAGGAGGGGTATCCT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSKACS*TEEGYP
Trigger: AGGATACCCCTCCTCTGTGCAGGAGCAAGCTTTACT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCGGGCTCGGTGCAGTTaGCTGGGTTCTCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRARCS*LGSPHA
Trigger: AGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTTCCACGGGCTCGGTaGAGTTGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLVPRAR*SCLGSP
Trigger: GGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGTCATCACCGTCGGCTaGTCGTCAGTGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREVITVG*SSVNSS
Trigger: TGAAGAGTTCACTGACGAGCAGCCGACGGTGATGAC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATGCAGCGCAGGAACTaGTTGGCCACCCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPMQRRN*LATPAA
Trigger: TGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCAGCGTGTGCATGTCTaGCATGAAATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSQRVHV*HEIQHF
Trigger: GAAGTGCTGGATTTCATGGCAGACATGCACACGCTG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTGTTATCTCTGTGGTTaGCCCGTGAGATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTCYLCG*PVRCPW
Trigger: CCATGGACATCTCACGGGGCAACCACAGAGATAACA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGGCATTTGGGCACACTaGATTGTGAGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREGIWAH*IVSEGT
Trigger: GGTTCCCTCACTCACAATGCAGTGTGCCCAAATGCC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAAGAGGGAGCACATGTaGAGCACGGAGGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSKREHM*STEVFD
Trigger: ATCAAAGACCTCCGTGCTGCACATGTGCTCCCTCTT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAACCATTAGCTGAAGGATaGTGGGTGTCACCCTACTCC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREPLAEG*WVSPYS
Trigger: GGAGTAGGGTGACACCCAGCATCCTTCAGCTAATGG...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCAATGTGCTGGCAGTaGATGGGATTCCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSMCWQ*MGFQAV
Trigger: CACAGCTTGGAATCCCATCCACTGCCAGCACATTGA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGAGATACAACGGGGGTaGTTTATCACCCAACGCTAC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTEIQRG*FITQRY
Trigger: GTAGCGTTGGGTGATAAACCACCCCCGTTGTATCTC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCTCCAGGCTGTCTGTaGGCTCCACCAGCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPPGCL*APPAGF
Trigger: AAAGCCGGCTGGTGGAGCCCACAGACAGCCTGGAGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGGCCTTCGAGCATCTaGAAACCCTTCCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRERPSSI*KPFHSW
Trigger: CCAGCTATGGAAGGGTTTCCAGATGCTCGAAGGCCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACTGAGGACGGAGGGATaGCTGGGGACGGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLRTEG*LGTEGE
Trigger: TTCTCCCTCCGTCCCCAGCCATCCCTCCGTCCTCAG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCATAGCAGGCTGGATTTaGTGGCACCTCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCIAGWI*WHLSSS
Trigger: TGAGGATGAGAGGTGCCACCAAATCCAGCCTGCTAT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGTGCTGATAGCAGGCTaGATTTGGTGGCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREVLIAG*IWWHLS
Trigger: TGAGAGGTGCCACCAAATCCAGCCTGCTATCAGCAC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAGCGCAGGAACTGCTTaGCCACCCCCGCCGCATTGC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSAGTA*PPPPHC
Trigger: GCAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGCGGGAAGATGCCGTTaGGGGCCAACTGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAAGRCR*GPTDGR
Trigger: TCTTCCATCAGTTGGCCCCCAACGGCATCTTCCCGC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTGTGGCTCTTCAGTTTaGTCAGCGTGTGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTCGSSV*SACACL
Trigger: CAGACATGCACACGCTGACCAAACTGAAGAGCCACA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTACACCTTCTCTCCTTaGGGAGCCCAATATAGCCAT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSYTFSP*GAQYSH
Trigger: ATGGCTATATTGGGCTCCTCAAGGAGAGAAGGTGTA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACAGGCCTGTTTCCGTaGCGACCACAGCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTGLFP*RPQHPA
Trigger: AGCAGGGTGCTGTGGTCGTCACGGAAACAGGCCTGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACGCATTCCCGCGTGTTaGTGGGCGGAGGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVRIPAC*WAEERS
Trigger: AGACCTCTCCTCCGCCCATCAACACGCGGGAATGCG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTCTTCAGCCATTTGGTaGCAAACTGAGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSSSAIW*QTEASA
Trigger: AGCTGAAGCCTCAGTTTGTCACCAAATGGCTGAAGA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACTGGGACTTCTGTTCTaGTGGCTTCCAGCCATTCCG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALGLLF*WLPAIP
Trigger: CGGAATGGCTGGAAGCCATCAGAACAGAAGTCCCAG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAAACATCTCCTCCATTaGGAAAGGCAGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTKHLLH*ERQRTE
Trigger: CTCTGTCCTCTGCCTTTCTCAATGGAGGAGATGTTT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGGTGTCCAAAATTCTTaGAAGGGCTACGAAACGGAC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSGVQNS*KGYETD
Trigger: GTCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGAGAGAACTCGGATTTaGCGACCCTCCACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAERTRI*RPSTGL
Trigger: CAAGCCTGTGGAGGGTCGTCAAATCCGAGTTCTCTC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCAAAGCGAGCTCTCTTaGTCTTCCATAAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCQSELS*SSIRLH
Trigger: ATGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCAAAGCGAGCTCTCTTaGTCTTCCATAAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSQSELS*SSIRLH
Trigger: ATGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTTTGAGGTGCAATCATaGAGCAACCTTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSFEVQS*SNLPAG
Trigger: ACCAGCAGGAAGGTTGCTTCATGATTGCACCTCAAA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTTTGAGGTGCAATCATaGAGCAACCTTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCFEVQS*SNLPAG
Trigger: ACCAGCAGGAAGGTTGCTTCATGATTGCACCTCAAA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGAGCAAACGACTTCTaGAGGAGGTCTCGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRANDF*RRSRFC
Trigger: GCAAAAACGAGACCTCCTTCAGAAGTCGTTTGCTCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCGTTGGGGGCCAACTaGTGGAAGATGCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPLGAN*WKMQRR
Trigger: CCTGCGCTGCATCTTCCATCAGTTGGCCCCCAACGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCCGTTGGGGGCCAACTaGTGGAAGATGCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSPLGAN*WKMQRR
Trigger: CCTGCGCTGCATCTTCCATCAGTTGGCCCCCAACGG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGGCACACTGCATTGTaGGTGAGGGAACCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGHTAL*VREPSS
Trigger: GCTGCTGGGTTCCCTCACTCACAATGCAGTGTGCCC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGATGCACTCATTGCATaGGACCACCCGAGGGACGCC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLDALIA*DHPRDA
Trigger: GGCGTCCCTCGGGTGGTCGCATGCAATGAGTGCATC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGATGCACTCATTGCATaGGACCACCCGAGGGACGCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKDALIA*DHPRDA
Trigger: GGCGTCCCTCGGGTGGTCGCATGCAATGAGTGCATC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACTCACTGTGGTCCCCTaGAATCCTCTCGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALTVVP*NPLAAF
Trigger: GAATGCAGCGAGAGGATTGCAGGGGACCACAGTGAG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGAAGCAGGTGACAACTaGTCTTCTAACGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCEAGDN*SSNVGT
Trigger: AGTTCCCACGTTAGAAGAGCAGTTGTCACCTGCTTC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCAGCTGAGTCACTGTaGTACAGGACTTATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSAESL*YRTYPS
Trigger: ACTGGGATAAGTCCTGTAGCACAGTGACTCAGCTGA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACGGGCTCGGTGCAGTTaGCTGGGTTCTCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVRARCS*LGSPHA
Trigger: AGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTTCCACGGGCTCGGTaGAGTTGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVPRAR*SCLGSP
Trigger: GGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCTTCTGGCGGTTTCTTaGAAAGCGAGCTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCLLAVS*KASSLD
Trigger: ATCAAGAGAGCTCGCTTTGCAAGAAACCGCCAGAAG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCTTCTCCCCCTCAGTaGCCGGGTCAGGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLASPPQ*PGQGDH
Trigger: ATGATCACCCTGACCCGGGCACTGAGGGGGAGAAGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTTCTGTGGGGTTCTCTaGATCTTCGGGAACTTTGAG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSFCGVL*IFGNFE
Trigger: CTCAAAGTTCCCGAAGATGCAGAGAACCCCACAGAA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCACCCCCGCCGCATTaGCGGGAACCATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPPPPH*REPSCF
Trigger: AAAGCATGATGGTTCCCGGCAATGCGGCGGGGGTGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTACTTCGTTGATGTACTaGCTCACACACTCCATCGCT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSTSLMY*LTHSIA
Trigger: AGCGATGGAGTGTGTGAGGCAGTACATCAACGAAGT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAGTTTGGTCAGCGTGTaGATGTCTGCCATGAAATCC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTSLVSV*MSAMKS
Trigger: GGATTTCATGGCAGACATGCACACGCTGACCAAACT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCCAAAGGTATCTTCATaGAGAGGCTGGGAACATGTC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTPKVSS*RGWEHV
Trigger: GACATGTTCCCAGCCTCTGCATGAAGATACCTTTGG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAACAATAAGATGGTCTaGAACGTGGGAGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSNNKMV*NVGACI
Trigger: GATGCAGGCTCCCACGTTGCAGACCATCTTATTGTT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCACTTTCGGAGGGCTaGCAGGCCAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPLSEG*QASTAL
Trigger: CAGAGCAGTGCTGGCCTGGCAGCCCTCCGAAAGTGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACCACTTTCGGAGGGCTaGCAGGCCAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVPLSEG*QASTAL
Trigger: CAGAGCAGTGCTGGCCTGGCAGCCCTCCGAAAGTGG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAATCAGCCACTCACTGTaGTCCCCTGCAATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAISHSL*SPAILS
Trigger: CGAGAGGATTGCAGGGGACCACAGTGAGTGGCTGAT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACCACTGAAACACCATaGCCACCAGCCGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTTETP*PPAGPS
Trigger: GCTTGGCCCGGCTGGTGGCCATGGTGTTTCAGTGGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCTCCAGGCTGTCTGTaGGCTCCACCAGCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPPGCL*APPAGF
Trigger: AAAGCCGGCTGGTGGAGCCCACAGACAGCCTGGAGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGAACGTACACTCTTCTaGCGGTTTCTTGCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTERTLF*RFLAKR
Trigger: TCGCTTTGCAAGAAACCGCCAGAAGAGTGTACGTTC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCTGAGGACGGAGGGATaGCTGGGGACGGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSLRTEG*LGTEGE
Trigger: TTCTCCCTCCGTCCCCAGCCATCCCTCCGTCCTCAG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTGAGGACGGAGGGATaGCTGGGGACGGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLRTEG*LGTEGE
Trigger: TTCTCCCTCCGTCCCCAGCCATCCCTCCGTCCTCAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTCGAGGTACTCTCTCTaGATAGCACTGACAGCAATC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSSRYSL*IALTAI
Trigger: GATTGCTGTCAGTGCTATCCAGAGAGAGTACCTCGA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTCGAGGTACTCTCTCTaGATAGCACTGACAGCAATC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTSRYSL*IALTAI
Trigger: GATTGCTGTCAGTGCTATCCAGAGAGAGTACCTCGA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATAGCAGGCTGGATTTaGTGGCACCTCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREIAGWI*WHLSSS
Trigger: TGAGGATGAGAGGTGCCACCAAATCCAGCCTGCTAT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTCTTCATGCAGAGGCTaGGAACATGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTSSCRG*EHVFMW
Trigger: CCACATGAAGACATGTTCCCAGCCTCTGCATGAAGA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCCGTGAGATGTCCATaGCTGCAATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPVRCP*LQSGPA
Trigger: GGCTGGCCCAGATTGCAGCCATGGACATCTCACGGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAGATGGTCTGCAACGTaGGAGCCTGCATCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRARWSAT*EPASRG
Trigger: TCCTCTGGATGCAGGCTCCCACGTTGCAGACCATCT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCCTGGAGGCGAAGCTaGAGTCCCGCAGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAWRRS*SPADKC
Trigger: GCACTTATCTGCGGGACTCCAGCTTCGCCTCCAGGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTATGGTGCTGTCCAGTTaGAAAGGCTTTGCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTMVLSS*KGFAPK
Trigger: TTTTGGGGCAAAGCCTTTCCAACTGGACAGCACCAT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAGGAGATTGTTGTCCTaGCGTCTGTTCGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRARRLLS*RLFGCP
Trigger: GGGACACCCGAACAGACGCCAGGACAACAATCTCCT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAAAGGTAGCCAACGTTaGTATCATCGTGTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCKGSQR*YHRVGQ
Trigger: TTGCCCTACACGATGATATCAACGTTGGCTACCTTT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGGAGGCTTCACTTGTaGAGGCCCATACGCAATCAC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAWRLHL*RPIRNH
Trigger: GTGATTGCGTATGGGCCTTCACAAGTGAAGCCTCCA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACCACAGCACCCTGCTaGGAAGCAGGTGACAACTGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTTAPC*EAGDNC
Trigger: GCAGTTGTCACCTGCTTCTCAGCAGGGTGCTGTGGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACCACAGCACCCTGCTaGGAAGCAGGTGACAACTGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTTAPC*EAGDNC
Trigger: GCAGTTGTCACCTGCTTCTCAGCAGGGTGCTGTGGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACAGGCCTGTTTCCGTaGCGACCACAGCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTGLFP*RPQHPA
Trigger: AGCAGGGTGCTGTGGTCGTCACGGAAACAGGCCTGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTACAGGCCTGTTTCCGTaGCGACCACAGCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSTGLFP*RPQHPA
Trigger: AGCAGGGTGCTGTGGTCGTCACGGAAACAGGCCTGT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTATATTCCGAATTGACTaGGCAGCCTCTGATCGTGTT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSIFRID*AASDRV
Trigger: AACACGATCAGAGGCTGCTCAGTCAATTCGGAATAT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCGTCTCAAATCTATTaGCAAAGAACTCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSASQIY*QRTPSS
Trigger: TGAGCTGGGAGTTCTTTGTCAATAGATTTGAGACGC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGGCCTTTGCACTGCTaGTGTCTGACTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRPLHC*CLTQRC
Trigger: GCAGCGCTGAGTCAGACATCAGCAGTGCAAAGGCCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCACATCTGCCGGATGTaGGGCTTTAGGGACCAGAGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLHICRM*GFRDQR
Trigger: CCTCTGGTCCCTAAAGCCTCACATCCGGCAGATGTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGATACTTGTAAAGGATaGCAAGCAAGGCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSDTCKG*QARPST
Trigger: GGTTGAAGGCCTTGCTTGTCATCCTTTACAAGTATC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGTCGCTGTCGGAGGTTaGGAGTATAGAGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREVAVGG*EYRVFF
Trigger: GAAAAACACTCTATACTCTCAACCTCCGACAGCGAC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGAGCAAACGACTTCTaGAGGAGGTCTCGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRERANDF*RRSRFC
Trigger: GCAAAAACGAGACCTCCTTCAGAAGTCGTTTGCTCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGTTTGTCCAGAATGTTaGAGGAGATGTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCVCPEC*RRCRGT
Trigger: AGTACCTCGACATCTCCTTCAACATTCTGGACAAAC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATCGGCTGCTCGTCAGTaGACTCTTCAGGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSAARQ*TLQVQA
Trigger: TGCCTGCACCTGAAGAGTTCACTGACGAGCAGCCGA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTCCCACAGACTGCATaGTATCCAGCAGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLFPQTA*YPAAAG
Trigger: CCCCGCTGCTGCTGGATATCATGCAGTCTGTGGGAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGGAGCTCAGCTCATTaGAGTCCATCAGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAWSSAH*SPSETR
Trigger: CCTCGTCTCTGATGGACTTCAATGAGCTGAGCTCCA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGACCCTCTAGGAGCTaGCTGAGAGCTGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRPSRS*LRAAME
Trigger: CTCCATCGCAGCTCTCAGTCAGCTCCTAGAGGGTCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGGGCCAGCCCCACTTTaGGATGTCCCCCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLGPAPL*DVPQRY
Trigger: ATACCTTTGGGGGACATCTCAAAGTGGGGCTGGCCC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACACTGCATTGTGAGTaGGGGAACCCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTLHCE*GNPAAA
Trigger: GGCTGCTGCTGGGTTCCCTCACTCACAATGCAGTGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACACTGCATTGTGAGTaGGGGAACCCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTLHCE*GNPAAA
Trigger: GGCTGCTGCTGGGTTCCCTCACTCACAATGCAGTGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGGCACACTGCATTGTaGGTGAGGGAACCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGHTAL*VREPSS
Trigger: GCTGCTGGGTTCCCTCACTCACAATGCAGTGTGCCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGGGCACACTGCATTGTaGGTGAGGGAACCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVGHTAL*VREPSS
Trigger: GCTGCTGGGTTCCCTCACTCACAATGCAGTGTGCCC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATTATGGGCCATTAGCTaGAGGATGCTGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALWAIS*RMLGVT
Trigger: GGTGACACCCAGCATCCTTCAGCTAATGGCCCATAA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAACTCACCCTTCGAGATaGAAGGTTCCCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRATHPSR*KVPCQF
Trigger: GAACTGGCAGGGAACCTTGCATCTCGAAGGGTGAGT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGCTCTGGTAGCCACTaGGGGGTTGACATCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSSGSH*GVDILH
Trigger: GTGGAGGATGTCAACCCCGCAGTGGCTACCAGAGCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCAAAGACATAGACCCTaGAATGCTGGCCTCTTTATG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSQRHRP*NAGLFM
Trigger: CATAAAGAGGCCAGCATTGCAGGGTCTATGTCTTTG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCTTCTCCCCCTCAGTaGCCGGGTCAGGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPASPPQ*PGQGDH
Trigger: ATGATCACCCTGACCCGGGCACTGAGGGGGAGAAGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATTCTGTGGGGTTCTCTaGATCTTCGGGAACTTTGAG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREFCGVL*IFGNFE
Trigger: CTCAAAGTTCCCGAAGATGCAGAGAACCCCACAGAA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAATCTTCCCACAGACTaGATGATATCCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRENLPTD*MISSSS
Trigger: GCTGCTGCTGGATATCATGCAGTCTGTGGGAAGATT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCACCCCCGCCGCATTaGCGGGAACCATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPPPPH*REPSCF
Trigger: AAAGCATGATGGTTCCCGGCAATGCGGCGGGGGTGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACAGCTGCGGGAAGATaGCGTTGGGGGCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTAAGR*RWGPTD
Trigger: ATCAGTTGGCCCCCAACGGCATCTTCCCGCAGCTGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACAGCTGCGGGAAGATaGCGTTGGGGGCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTAAGR*RWGPTD
Trigger: ATCAGTTGGCCCCCAACGGCATCTTCCCGCAGCTGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTGCTTTGGAACAGCTaGGGGAAGATGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLVLWNS*GKMPLG
Trigger: CCCCAACGGCATCTTCCCGCAGCTGTTCCAAAGCAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGGCTATCATCTGCTTaGTCAGGATTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRLSSA*SGLLTQ
Trigger: CTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAACTTCGTTGATGTACTaGCTCACACACTCCATCGCT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRETSLMY*LTHSIA
Trigger: AGCGATGGAGTGTGTGAGGCAGTACATCAACGAAGT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGCAACGTGGGAGCCTaGATCCAGAGGAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCNVGA*IQRNGQ
Trigger: CTGCCCATTCCTCTGGATGCAGGCTCCCACGTTGCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTACGGAGGTCTTTGATTaGTCTGGAAATCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTTEVFD*SGNPIR
Trigger: CCTGATTGGATTTCCAGAGCAATCAAAGACCTCCGT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAACGCTAGGTATAGGTaGAGAGAAATCTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTNARYR*REILVL
Trigger: GAGCACCAAGATTTCTCTGCACCTATACCTAGCGTT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTACCACTGAAACACCATaGCCACCAGCCGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSTTETP*PPAGPS
Trigger: GCTTGGCCCGGCTGGTGGCCATGGTGTTTCAGTGGT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCCTATGATAAACTCTaGTCTGGAAGAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSAYDKL*SGRKEA
Trigger: AGCCTCCTTTCTTCCAGACCAGAGTTTATCATAGGC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTCGGTGCAGTTGCCTaGGTTCTCCCCATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLGAVA*VLPMLA
Trigger: AGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGAAGTGACAGGGCATaGAGGAGAAGAGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGSDRA*RRRGTA
Trigger: GGCAGTCCCTCTTCTCCTCCATGCCCTGTCACTTCC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCAATCCAAATGTAGCTaGGCTTCCAAAGAAAGCGTC +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTQSKCS*ASKESV
Trigger: GACGCTTTCTTTGGAAGCCCAGCTACATTTGGATTG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGGGAGAGCGCCCTCTTaGATTCCACAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLGRAPS*IPQALS
Trigger: TGAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCGTATTCTTCAAGAATaGCCCCACAGTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRILQE*PHSHGI
Trigger: AATGCCATGACTGTGGGGCCATTCTTGAAGAATACG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCGTATTCTTCAAGAATaGCCCCACAGTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCRILQE*PHSHGI
Trigger: AATGCCATGACTGTGGGGCCATTCTTGAAGAATACG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCGGGAAGATGCCGTTaGGGGCCAACTGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLAGRCR*GPTDGR
Trigger: TCTTCCATCAGTTGGCCCCCAACGGCATCTTCCCGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCCGTGAGATGTCCATaGCTGCAATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPVRCP*LQSGPA
Trigger: GGCTGGCCCAGATTGCAGCCATGGACATCTCACGGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAGGATAACAATAAGATaGTCTGCAACGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTRITIR*SATWEP
Trigger: AGGCTCCCACGTTGCAGACCATCTTATTGTTATCCT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCCTGGAGGCGAAGCTaGAGTCCCGCAGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPAWRRS*SPADKC
Trigger: GCACTTATCTGCGGGACTCCAGCTTCGCCTCCAGGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCTGCTTCCGAGGACTaGATCTCCACCTGGGCCATT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLAASED*ISTWAI
Trigger: AATGGCCCAGGTGGAGATCCAGTCCTCGGAAGCAGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTATTTTCGGCCCTCTCTaGCCTTTGCACATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSIFGPL*PLHIFY
Trigger: GTAAAAGATGTGCAAAGGCCAGAGAGGGCCGAAAAT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAAAGACACATGGTCATaGGCACTGTCAAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCKDTWS*ALSNWR
Trigger: CCTCCAATTTGACAGTGCCCATGACCATGTGTCTTT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTCAGTCAGGTGTCACTaGCTTATGGTGACGGTTTTT +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTSVRCH*LMVTVF
Trigger: AAAAACCGTCACCATAAGCCAGTGACACCTGACTGA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTACCACAGCACCCTGCTaGGAAGCAGGTGACAACTGC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSTTAPC*EAGDNC
Trigger: GCAGTTGTCACCTGCTTCTCAGCAGGGTGCTGTGGT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTATTACTGTGATGATTTaGGTGGCACCTCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTITVMI*VAPLAV
Trigger: TACTGCAAGAGGTGCCACTCAAATCATCACAGTAAT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTATTACTGTGATGATTTaGGTGGCACCTCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSITVMI*VAPLAV
Trigger: TACTGCAAGAGGTGCCACTCAAATCATCACAGTAAT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGCAGAGGATTCGGTTaGGACCTTCCTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGRGFG*DLPSAE
Trigger: CTCAGCTGAAGGAAGGTCTCAACCGAATCCTCTGCC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCCCAGACAGATTGATTaGTCACATTATAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTPRQID*SHYRGS
Trigger: TGATCCCCTATAATGTGATCAATCAATCTGTCTGGG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTGGGACTTCTGTTCTaGTGGCTTCCAGCCATTCCG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLGLLF*WLPAIP
Trigger: CGGAATGGCTGGAAGCCATCAGAACAGAAGTCCCAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAACTCCGATAATACATaGAGCCACAGTAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCNSDNT*SHSKAC
Trigger: GCAAGCTTTACTGTGGCTTCATGTATTATCGGAGTT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCTCTAAACCCATCGTaGTTCCATCATCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSALNPS*FHHLVT
Trigger: AGTTACAAGATGATGGAATCACGATGGGTTTAGAGC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGAGAGAACTCGGATTTaGCGACCCTCCACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLERTRI*RPSTGL
Trigger: CAAGCCTGTGGAGGGTCGTCAAATCCGAGTTCTCTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCCAGGGAAGACAGCTaGGAGAACTCGGATTTGACG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLAREDS*ENSDLT
Trigger: CGTCAAATCCGAGTTCTCTCAGCTGTCTTCCCTGGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCCAGGGAAGACAGCTaGGAGAACTCGGATTTGACG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAREDS*ENSDLT
Trigger: CGTCAAATCCGAGTTCTCTCAGCTGTCTTCCCTGGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAACTGTAATCAGCTGGTaGACTGTCTGGTGGTCGATC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRATVISW*TVWWSI
Trigger: GATCGACCACCAGACAGTTCACCAGCTGATTACAGT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACAGTATTTGAGCACCTaGACCACTAAGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAQYLST*TTKGRR
Trigger: CCTTCTCCCCTTAGTGGTTCAGGTGCTCAAATACTG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACACATCTGCCGGATGTaGGGCTTTAGGGACCAGAGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPHICRM*GFRDQR
Trigger: CCTCTGGTCCCTAAAGCCTCACATCCGGCAGATGTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCACATCTGCCGGATGTaGGGCTTTAGGGACCAGAGG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSHICRM*GFRDQR
Trigger: CCTCTGGTCCCTAAAGCCTCACATCCGGCAGATGTG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGATACTTGTAAAGGATaGCAAGCAAGGCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREDTCKG*QARPST
Trigger: GGTTGAAGGCCTTGCTTGTCATCCTTTACAAGTATC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGTATTGACTGTTATGTaGATCAGATGCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCVLTVM*IRCSRI
Trigger: GATCCTGCTGCATCTGATTCACATAACAGTCAATAC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGGGGCTTGCAGCTATaGTACTGCGCATTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAWGLQL*YCALSV
Trigger: TACACTCAATGCGCAGTATCATAGCTGCAAGCCCCA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGACGGTTTTTGCCCCTaGACTTGGCATCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPDGFCP*TWHQLP
Trigger: GGGGAGCTGATGCCAAGTTCAGGGGCAAAAACCGTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGTTTGTCCAGAATGTTaGAGGAGATGTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREVCPEC*RRCRGT
Trigger: AGTACCTCGACATCTCCTTCAACATTCTGGACAAAC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTCCCACAGACTGCATaGTATCCAGCAGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPFPQTA*YPAAAG
Trigger: CCCCGCTGCTGCTGGATATCATGCAGTCTGTGGGAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATTCCCACAGACTGCATaGTATCCAGCAGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVFPQTA*YPAAAG
Trigger: CCCCGCTGCTGCTGGATATCATGCAGTCTGTGGGAA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCTCTAGGAGCTGACTaGGAGCTGCGATGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPLGAD*ELRWSS
Trigger: TGAGCTCCATCGCAGCTCTCAGTCAGCTCCTAGAGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGACCCTCTAGGAGCTaGCTGAGAGCTGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRPSRS*LRAAME
Trigger: CTCCATCGCAGCTCTCAGTCAGCTCCTAGAGGGTCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGGGCCAGCCCCACTTTaGGATGTCCCCCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSGPAPL*DVPQRY
Trigger: ATACCTTTGGGGGACATCTCAAAGTGGGGCTGGCCC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGGCCAGCCCCACTTTaGGATGTCCCCCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGPAPL*DVPQRY
Trigger: ATACCTTTGGGGGACATCTCAAAGTGGGGCTGGCCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCTGTGGTTGCCCCGTaGGATGTCCATGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSVVAP*DVHGCN
Trigger: ATTGCAGCCATGGACATCTCACGGGGCAACCACAGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACAGCTGAGCAAAGATaGACGCGTGGAAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTAEQR*TRGRGS
Trigger: GCTCCCTCTTCCACGCGTTCATCTTTGCTCAGCTGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGGTTCACGTGGTTCTaGATAGCCTGGAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKWFTWF*IAWRRS
Trigger: GCTTCGCCTCCAGGCTATTCAGAACCACGTGAACCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGGTTCACGTGGTTCTaGATAGCCTGGAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLWFTWF*IAWRRS
Trigger: GCTTCGCCTCCAGGCTATTCAGAACCACGTGAACCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCACCTGGGCCATTTTaGACTGAGTGCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPPGPF*TECTAT
Trigger: GGTTGCAGTGCACTCAGTTCAAAATGGCCCAGGTGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAAAATCTGTGTCGTGTaGGCTCCCTCGCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSKICVV*APSLRQ
Trigger: CTGGCGGAGCGAGGGAGCTCACACGACACAGATTTT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACTCACTGTGGTCCCCTaGAATCCTCTCGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLTVVP*NPLAAF
Trigger: GAATGCAGCGAGAGGATTGCAGGGGACCACAGTGAG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTCACTGTGGTCCCCTaGAATCCTCTCGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLTVVP*NPLAAF
Trigger: GAATGCAGCGAGAGGATTGCAGGGGACCACAGTGAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGCCACAGTAAAGCTTaGTCCTGCACAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSHSKA*SCTEEG
Trigger: CCCCTCCTCTGTGCAGGAGCAAGCTTTACTGTGGCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGCCACAGTAAAGCTTaGTCCTGCACAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSHSKA*SCTEEG
Trigger: CCCCTCCTCTGTGCAGGAGCAAGCTTTACTGTGGCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCTGGGTTCTCCCCATaGTTGCTTGCAGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPGFSP*LLAGFS
Trigger: GGAGAATCCTGCAAGCAAGCATGGGGAGAACCCAGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCAGCAGAAGGCATGTaGCAGGGAGTACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLAAEGM*QGVLQQ
Trigger: CTGCTGAAGTACTCCCTGGCACATGCCTTCTGCTGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCAGCAGAAGGCATGTaGCAGGGAGTACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAAEGM*QGVLQQ
Trigger: CTGCTGAAGTACTCCCTGGCACATGCCTTCTGCTGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGCTCTGGTAGCCACTaGGGGGTTGACATCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSSGSH*GVDILH
Trigger: GTGGAGGATGTCAACCCCGCAGTGGCTACCAGAGCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCGTGGCATGGGGCTTaGAGCTATGATACTGCGCAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPWHGA*SYDTAH
Trigger: ATGCGCAGTATCATAGCTGCAAGCCCCATGCCACGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCGTGGCATGGGGCTTaGAGCTATGATACTGCGCAT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPWHGA*SYDTAH
Trigger: ATGCGCAGTATCATAGCTGCAAGCCCCATGCCACGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACTGTACAAAGGTCCTaGCGTGGCATGGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTVQRS*RGMGLA
Trigger: TGCAAGCCCCATGCCACGGCAGGACCTTTGTACAGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTTCTGTATCAGATTCTaGACTGGTATCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCFCIRF*TGIRLL
Trigger: GAGAAGCCTGATACCAGTGCAGAATCTGATACAGAA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGTGAACTCTTCAGGTaGAGGCACAAACATACTGAC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRESELFR*RHKHTD
Trigger: GTCAGTATGTTTGTGCCTGCACCTGAAGAGTTCACT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACAGCTGCGGGAAGATaGCGTTGGGGGCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTAAGR*RWGPTD
Trigger: ATCAGTTGGCCCCCAACGGCATCTTCCCGCAGCTGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTGCTTTGGAACAGCTaGGGGAAGATGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVLWNS*GKMPLG
Trigger: CCCCAACGGCATCTTCCCGCAGCTGTTCCAAAGCAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGTGCTTTGGAACAGCTaGGGGAAGATGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVVLWNS*GKMPLG
Trigger: CCCCAACGGCATCTTCCCGCAGCTGTTCCAAAGCAC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGCTTCCATGAAGGTTaGAATGTTTTCCAAACAGCG +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSFHEG*NVFQTA
Trigger: CGCTGTTTGGAAAACATTGCAACCTTCATGGAAGCT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTTGAGCTTTAGGGCCTaGAGAAGTTCTAGAACAACA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCLSFRA*RSSRTT
Trigger: TGTTGTTCTAGAACTTCTGCAGGCCCTAAAGCTCAA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGCAACGTGGGAGCCTaGATCCAGAGGAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPCNVGA*IQRNGQ
Trigger: CTGCCCATTCCTCTGGATGCAGGCTCCCACGTTGCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACTTTGGTGGACATGGTaGTGTCCAGTTGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALWWTW*CPVGKA
Trigger: AGCCTTTCCAACTGGACAGCACCATGTCCACCAAAG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTATGTTCCTTGCAAGCTaGCACTTTTCCCAGGATAAA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSMFLAS*HFSQDK
Trigger: TTTATCCTGGGAAAAGTGGCAGCTTGCAAGGAACAT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCTTTGTAATGTTCCTTaGAAGCTGCCACTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTLCNVP*KLPLFP
Trigger: TGGGAAAAGTGGCAGCTTGCAAGGAACATTACAAAG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGAGATACAACGGGGGTaGTTTATCACCCAACGCTAC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAEIQRG*FITQRY
Trigger: GTAGCGTTGGGTGATAAACCACCCCCGTTGTATCTC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTATCCAGGGAATGGTaGGAAGAGGAGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLSREW*EEERPS
Trigger: GCTGGGCCTCTCCTCTTCCCACCATTCCCTGGATAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCATTATCCAGGGAATaGTGGGAAGAGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLALSRE*WEEERP
Trigger: GGGCCTCTCCTCTTCCCACCATTCCCTGGATAATGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGGAAGTGACAGGGCATaGAGGAGAAGAGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSGSDRA*RRRGTA
Trigger: GGCAGTCCCTCTTCTCCTCCATGCCCTGTCACTTCC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGAAGTGACAGGGCATaGAGGAGAAGAGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGSDRA*RRRGTA
Trigger: GGCAGTCCCTCTTCTCCTCCATGCCCTGTCACTTCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAATGCTGGCCTCTTTATaGTGTCAAGCAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAMLASL*CQAGDQ
Trigger: CTGGTCTCCTGCTTGACACCATAAAGAGGCCAGCAT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGGAGAGCGCCCTCTTaGATTCCACAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGRAPS*IPQALS
Trigger: TGAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGATCCCAGCGTCTTCTaGGAGCAGGTCCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLDPSVF*EQVLDG
Trigger: ACCATCAAGGACCTGCTCCCAGAAGACGCTGGGATC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGATCCCAGCGTCTTCTaGGAGCAGGTCCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKDPSVF*EQVLDG
Trigger: ACCATCAAGGACCTGCTCCCAGAAGACGCTGGGATC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTCTTCTCTCACACAGTaGAGAAGGCTGTCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSSSLTQ*RRLSCN
Trigger: ATTACAAGACAGCCTTCTCCACTGTGTGAGAGAAGA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAACGTCCAGGGTCGTTTaGTCTTTGTGCGATATACGC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRATSRVV*SLCDIR
Trigger: GCGTATATCGCACAAAGACCAAACGACCCTGGACGT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGGGCCGTCATCGCCTTaGTTCATCGTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLGPSSP*FIVSSS
Trigger: AGAAGAGGAGACGATGAACCAAGGCGATGACGGCCC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGGCCGTCATCGCCTTaGTTCATCGTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGPSSP*FIVSSS
Trigger: AGAAGAGGAGACGATGAACCAAGGCGATGACGGCCC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTGCTTCAGCGTCAGTaGGCTACCGCAGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLLQRQ*ATAGEL
Trigger: GAGTTCTCCTGCGGTAGCCCACTGACGCTGAAGCAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGTTGATATTGAGGAATaGCTACTTGTTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSVDIEE*LLVSGT
Trigger: TGTGCCGGAAACAAGTAGCCATTCCTCAATATCAAC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACCTCTCATCCTCAATaGCTGTCCCTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTSHPQ*LSLQVR
Trigger: CCTGACCTGGAGGGACAGCCATTGAGGATGAGAGGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGCGGGAAGATGCCGTTaGGGGCCAACTGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVAGRCR*GPTDGR
Trigger: TCTTCCATCAGTTGGCCCCCAACGGCATCTTCCCGC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGAACATGTCTTCATGTaGCTCTTCAGTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREEHVFM*LFSLVS
Trigger: GCTGACCAAACTGAAGAGCCACATGAAGACATGTTC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCCATGGCTGCAATCTaGGCCAGCCCCACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSMAAI*ASPTLR
Trigger: TCTCAAAGTGGGGCTGGCCCAGATTGCAGCCATGGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGATGGTCTGCAACGTaGGAGCCTGCATCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRWSAT*EPASRG
Trigger: TCCTCTGGATGCAGGCTCCCACGTTGCAGACCATCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGCTGCTTCCGAGGACTaGATCTCCACCTGGGCCATT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVAASED*ISTWAI
Trigger: AATGGCCCAGGTGGAGATCCAGTCCTCGGAAGCAGC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTGTCCCACCGAGAGCTaGAGCAGACTGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSCPTES*SRLLMP
Trigger: AGGCATGAGCAGTCTGCTCCAGCTCTCGGTGGGACA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAGGACTGTCAGCAATaGCTTTCCGCGGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLQDCQQ*LSAEEL
Trigger: CAACTCTTCCGCGGAAAGTCATTGCTGACAGTCCTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAGGACTGTCAGCAATaGCTTTCCGCGGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQDCQQ*LSAEEL
Trigger: CAACTCTTCCGCGGAAAGTCATTGCTGACAGTCCTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGGAGGCTTCACTTGTaGAGGCCCATACGCAATCAC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKWRLHL*RPIRNH
Trigger: GTGATTGCGTATGGGCCTTCACAAGTGAAGCCTCCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACATTTGGTGACAAACTaGGGCTTCAGCTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAHLVTN*GFSFST
Trigger: GGTGGAAAAGCTGAAGCCTCAGTTTGTCACCAAATG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGCAGAGGATTCGGTTaGGACCTTCCTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGRGFG*DLPSAE
Trigger: CTCAGCTGAAGGAAGGTCTCAACCGAATCCTCTGCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTGGGACTTCTGTTCTaGTGGCTTCCAGCCATTCCG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLGLLF*WLPAIP
Trigger: CGGAATGGCTGGAAGCCATCAGAACAGAAGTCCCAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCTGGGACTTCTGTTCTaGTGGCTTCCAGCCATTCCG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSLGLLF*WLPAIP
Trigger: CGGAATGGCTGGAAGCCATCAGAACAGAAGTCCCAG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAACAGAGGATACTAGACTaGCATAAGTTGCACTCGATT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREQRILD*HKLHSI
Trigger: AATCGAGTGCAACTTATGTCAGTCTAGTATCCTCTG...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGAGAGAACTCGGATTTaGCGACCCTCCACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPERTRI*RPSTGL
Trigger: CAAGCCTGTGGAGGGTCGTCAAATCCGAGTTCTCTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCCAGGGAAGACAGCTaGGAGAACTCGGATTTGACG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPAREDS*ENSDLT
Trigger: CGTCAAATCCGAGTTCTCTCAGCTGTCTTCCCTGGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAAGATGTCAGCACCATaGGGAAGTGACAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLKMSAP*GSDRAW
Trigger: CCATGCCCTGTCACTTCCTCATGGTGCTGACATCTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAAGATGTCAGCACCATaGGGAAGTGACAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKKMSAP*GSDRAW
Trigger: CCATGCCCTGTCACTTCCTCATGGTGCTGACATCTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTGGGAGCAGGTCCTTaGTGGTGTTGTCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLGAGP*WCCHSQ
Trigger: CTGAGAATGACAACACCATCAAGGACCTGCTCCCAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACTGGGAGCAGGTCCTTaGTGGTGTTGTCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLGAGP*WCCHSQ
Trigger: CTGAGAATGACAACACCATCAAGGACCTGCTCCCAG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCACTCTCGACTATTCTaGGAGGGGGAAGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLHSRLF*EGEEAQ
Trigger: TTGAGCCTCTTCCCCCTCTCAGAATAGTCGAGAGTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACACTCTCGACTATTCTaGGAGGGGGAAGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKHSRLF*EGEEAQ
Trigger: TTGAGCCTCTTCCCCCTCTCAGAATAGTCGAGAGTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACATCTTCGGGAACTTTaGGGAGGACGGTTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKHLREL*GGRFLP
Trigger: GGGCAAAAACCGTCCTCCTCAAAGTTCCCGAAGATG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATGCCTGGGAACAATCTaGATCTTAAATTCGGATTCC +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRECLGTI*ILNSDS
Trigger: GGAATCCGAATTTAAGATTCAGATTGTTCCCAGGCA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTGGCATTTCCAAAGTTaGAAGTCCTTTAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSWHFQS*KSFSRR
Trigger: CCTTCTACTAAAGGACTTTCAACTTTGGAAATGCCA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAAAAAGTCCCATCTTTaGTCGTGCTTTGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREKKSHL*SCFGTA
Trigger: AGCTGTTCCAAAGCACGATCAAAGATGGGACTTTTT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGGAGCTCAGCTCATTaGAGTCCATCAGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKWSSAH*SPSETR
Trigger: CCTCGTCTCTGATGGACTTCAATGAGCTGAGCTCCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACTGGTAAAGGAGATTTaGGCTTTAGGGCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALVKEI*ALGPAE
Trigger: TTCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCTGTGGTTGCCCCGTaGGATGTCCATGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSVVAP*DVHGCN
Trigger: ATTGCAGCCATGGACATCTCACGGGGCAACCACAGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATCTGTGGTTGCCCCGTaGGATGTCCATGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSVVAP*DVHGCN
Trigger: ATTGCAGCCATGGACATCTCACGGGGCAACCACAGA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTATGGGCCATTAGCTaGAGGATGCTGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLWAIS*RMLGVT
Trigger: GGTGACACCCAGCATCCTTCAGCTAATGGCCCATAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCACCTGGGCCATTTTaGACTGAGTGCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPPGPF*TECTAT
Trigger: GGTTGCAGTGCACTCAGTTCAAAATGGCCCAGGTGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCCACCTGGGCCATTTTaGACTGAGTGCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSPPGPF*TECTAT
Trigger: GGTTGCAGTGCACTCAGTTCAAAATGGCCCAGGTGG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGAAAGATGCACTCATTaGATGCGACCACCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKERCTH*MRPPEG
Trigger: TCCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGAAAGATGCACTCATTaGATGCGACCACCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLERCTH*MRPPEG
Trigger: TCCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATTGTGGCATTCAATGTaGTGGCAGTGGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALWHSM*WQWMGF
Trigger: GAATCCCATCCACTGCCAGCACATTGAATGCCACAA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTGAGTGGCACCTCTTaGAGTACCGAACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLSGTS*STEQAC
Trigger: ACAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTGAGTGGCACCTCTTaGAGTACCGAACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLSGTS*STEQAC
Trigger: ACAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGCTCATGTTCTCGCTaGTCAGCATGGAACTCGGCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSSCSR*SAWNSA
Trigger: AGCCGAGTTCCATGCTGAGCAGCGAGAACATGAGCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGCTCATGTTCTCGCTaGTCAGCATGGAACTCGGCT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSSCSR*SAWNSA
Trigger: AGCCGAGTTCCATGCTGAGCAGCGAGAACATGAGCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACTCACCCTTCGAGATaGAAGGTTCCCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTHPSR*KVPCQF
Trigger: GAACTGGCAGGGAACCTTGCATCTCGAAGGGTGAGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTCCTTTGATAAGCTGTaGTCTAAACCCATCGTGATT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSSFDKL*SKPIVI
Trigger: AATCACGATGGGTTTAGAGCACAGCTTATCAAAGGA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTCCCCATGCTTGCTTaGAGGATTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLPMLA*RILLLL
Trigger: GAGGAGGAGGAGAATCCTGCAAGCAAGCATGGGGAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGGTTCTCCCCATGCTTaGTTGCAGGATTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLGSPHA*LQDSPP
Trigger: AGGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGTTCTCCCCATGCTTaGTTGCAGGATTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGSPHA*LQDSPP
Trigger: AGGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCTGGGTTCTCCCCATaGTTGCTTGCAGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPGFSP*LLAGFS
Trigger: GGAGAATCCTGCAAGCAAGCATGGGGAGAACCCAGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACCTGGGTTCTCCCCATaGTTGCTTGCAGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVPGFSP*LLAGFS
Trigger: GGAGAATCCTGCAAGCAAGCATGGGGAGAACCCAGG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGCAACTTTTTCCACTaGTTCAAACCTCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSNFFH*FKPHLP
Trigger: TGGAAGATGAGGTTTGAAGCAGTGGAAAAAGTTGCT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAGAGCAGGAATATCCTaGTTAAGAAAGTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTRAGIS*LRKCKS
Trigger: ACTCTTGCACTTTCTTAAGCAGGATATTCCTGCTCT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACTTCTGGCGGTTTCTTaGAAAGCGAGCTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALLAVS*KASSLD
Trigger: ATCAAGAGAGCTCGCTTTGCAAGAAACCGCCAGAAG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACTGTACAAAGGTCCTaGCGTGGCATGGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTVQRS*RGMGLA
Trigger: TGCAAGCCCCATGCCACGGCAGGACCTTTGTACAGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAACTGTACAAAGGTCCTaGCGTGGCATGGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVTVQRS*RGMGLA
Trigger: TGCAAGCCCCATGCCACGGCAGGACCTTTGTACAGT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGTCGTTTGGTCTTTGTaGGATATACGCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAVVWSL*DIRSLG
Trigger: ACCCAAGCTGCGTATATCGCACAAAGACCAAACGAC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCAACTGATGGAAGATaGAGCGCAGGAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPTDGR*SAGTAW
Trigger: CCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACACACACTCCATCGCTaGAGTCCCACATCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPHTLHR*SPTSRY
Trigger: GTACCTGGATGTGGGACTGCAGCGATGGAGTGTGTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGCATTTGGGCACACTaGATTGTGAGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGIWAH*IVSEGT
Trigger: GGTTCCCTCACTCACAATGCAGTGTGCCCAAATGCC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAACAATAAGATGGTCTaGAACGTGGGAGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRANNKMV*NVGACI
Trigger: GATGCAGGCTCCCACGTTGCAGACCATCTTATTGTT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCATTAGCTGAAGGATaGTGGGTGTCACCCTACTCC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPLAEG*WVSPYS
Trigger: GGAGTAGGGTGACACCCAGCATCCTTCAGCTAATGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCATTAGCTGAAGGATaGTGGGTGTCACCCTACTCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPLAEG*WVSPYS
Trigger: GGAGTAGGGTGACACCCAGCATCCTTCAGCTAATGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACAGTTGGAAAGGCTTTaGCCCAAAATCTGTGTCGTG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAQLERL*PKICVV
Trigger: CACGACACAGATTTTGGGGCAAAGCCTTTCCAACTG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTCATCTGGTCCAGTGTaGAAGCTACAGTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSSSGPV*KLQFSI
Trigger: AATTGAAAACTGTAGCTTGCACACTGGACCAGATGA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATCAGCCACTCACTGTaGTCCCCTGCAATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPISHSL*SPAILS
Trigger: CGAGAGGATTGCAGGGGACCACAGTGAGTGGCTGAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAATCAGCCACTCACTGTaGTCCCCTGCAATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVISHSL*SPAILS
Trigger: CGAGAGGATTGCAGGGGACCACAGTGAGTGGCTGAT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTATCCAGGGAATGGTaGGAAGAGGAGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLSREW*EEERPS
Trigger: GCTGGGCCTCTCCTCTTCCCACCATTCCCTGGATAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAACCATCATATACGCAGTaGAGTGAAACCACTGAAACA +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREPSYTQ*SETTET
Trigger: TGTTTCAGTGGTTTCACTCCACTGCGTATATGATGG...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGATCCCAGCGTCTTCTaGGAGCAGGTCCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVDPSVF*EQVLDG
Trigger: ACCATCAAGGACCTGCTCCCAGAAGACGCTGGGATC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACAAAGGTCCTGCCGTaGCATGGGGCTTGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTKVLP*HGACSY
Trigger: ATAGCTGCAAGCCCCATGCCACGGCAGGACCTTTGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAACAAAGGTCCTGCCGTaGCATGGGGCTTGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVTKVLP*HGACSY
Trigger: ATAGCTGCAAGCCCCATGCCACGGCAGGACCTTTGT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGGCCTTCGAGCATCTaGAAACCCTTCCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRPSSI*KPFHSW
Trigger: CCAGCTATGGAAGGGTTTCCAGATGCTCGAAGGCCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGGGCCGTCATCGCCTTaGTTCATCGTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSGPSSP*FIVSSS
Trigger: AGAAGAGGAGACGATGAACCAAGGCGATGACGGCCC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGGCCGTCATCGCCTTaGTTCATCGTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGPSSP*FIVSSS
Trigger: AGAAGAGGAGACGATGAACCAAGGCGATGACGGCCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTGCTTCAGCGTCAGTaGGCTACCGCAGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLLQRQ*ATAGEL
Trigger: GAGTTCTCCTGCGGTAGCCCACTGACGCTGAAGCAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTATCAGATTCTGCACTaGTATCAGGCTTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCYQILH*YQASHF
Trigger: AAAGTGAGAAGCCTGATACCAGTGCAGAATCTGATA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGCCGCTTCATTAACTaGCTCATTGTCAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRACRFIN*LIVRTP
Trigger: GGGAGTTCTGACAATGAGCCAGTTAATGAAGCGGCA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCAGGCTGGATTTGGTaGCACCTCTCATCCTCAATG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAGWIW*HLSSSM
Trigger: CATTGAGGATGAGAGGTGCCACCAAATCCAGCCTGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCAGGCTGGATTTGGTaGCACCTCTCATCCTCAATG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLAGWIW*HLSSSM
Trigger: CATTGAGGATGAGAGGTGCCACCAAATCCAGCCTGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTGCTGATAGCAGGCTaGATTTGGTGGCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVLIAG*IWWHLS
Trigger: TGAGAGGTGCCACCAAATCCAGCCTGCTATCAGCAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATGGCCCCACAGTCATaGCATTTGTCCGTCATCACC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKMAPQS*HLSVIT
Trigger: GGTGATGACGGACAAATGCCATGACTGTGGGGCCAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGGAGAGGACCACGATaGCTAGCCCAAGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKWRGPR*LAQVSL
Trigger: AAGAGACACTTGGGCTAGCCATCGTGGTCCTCTCCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGGAGAGGACCACGATaGCTAGCCCAAGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLWRGPR*LAQVSL
Trigger: AAGAGACACTTGGGCTAGCCATCGTGGTCCTCTCCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATTGACTCAGCTAGTTTaGTTCCAGCATCTGCACAAA +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRELTQLV*FQHLHK
Trigger: TTTGTGCAGATGCTGGAACCAAACTAGCTGAGTCAA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATCTTCATGCAGAGGCTaGGAACATGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRASSCRG*EHVFMW
Trigger: CCACATGAAGACATGTTCCCAGCCTCTGCATGAAGA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCCATGGCTGCAATCTaGGCCAGCCCCACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSMAAI*ASPTLR
Trigger: TCTCAAAGTGGGGCTGGCCCAGATTGCAGCCATGGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGATGGTCTGCAACGTaGGAGCCTGCATCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRWSAT*EPASRG
Trigger: TCCTCTGGATGCAGGCTCCCACGTTGCAGACCATCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCAAAGATGAACGCGTaGAAGAGGGAGCACATGTGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAKMNA*KREHMC
Trigger: GCACATGTGCTCCCTCTTCCACGCGTTCATCTTTGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCGCTTTGGTGGACATaGTGCTGTCCAGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPLWWT*CCPVGK
Trigger: CTTTCCAACTGGACAGCACCATGTCCACCAAAGCGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACTGCTCCGCTTTGGTaGACATGGTGCTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTAPLW*TWCCPV
Trigger: AACTGGACAGCACCATGTCCACCAAAGCGGAGCAGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGAGATTGTTGTCCTaGCGTCTGTTCGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRRLLS*RLFGCP
Trigger: GGGACACCCGAACAGACGCCAGGACAACAATCTCCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCGCCGAACGGAAACATaGATTCGTGGAAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRRTET*IRGNGH
Trigger: ATGGCCATTTCCACGAATTCATGTTTCCGTTCGGCG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGGAGGCTTCACTTGTaGAGGCCCATACGCAATCAC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPWRLHL*RPIRNH
Trigger: GTGATTGCGTATGGGCCTTCACAAGTGAAGCCTCCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATCACCCAACGCTACTaGCAGGGAAGGGTCTATACA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKITQRY*QGRVYT
Trigger: TGTATAGACCCTTCCCTGTCAGTAGCGTTGGGTGAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGTTGAAGTGGAACCATaGTATCTAACTCCGATAATA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSVEVEP*YLTPII
Trigger: TATTATCGGAGTTAGATATCATGGTTCCACTTCAAC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACTAAGCATATTGTGCTaGACTCGTCGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLSILC*TRRPGS
Trigger: TGATCCTGGCCGACGAGTTCAGCACAATATGCTTAG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTAAGCATATTGTGCTaGACTCGTCGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLSILC*TRRPGS
Trigger: TGATCCTGGCCGACGAGTTCAGCACAATATGCTTAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAAGATGTCAGCACCATaGGGAAGTGACAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPKMSAP*GSDRAW
Trigger: CCATGCCCTGTCACTTCCTCATGGTGCTGACATCTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGCGTCTCAAATCTATTaGCAAAGAACTCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAASQIY*QRTPSS
Trigger: TGAGCTGGGAGTTCTTTGTCAATAGATTTGAGACGC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTGGGAGCAGGTCCTTaGTGGTGTTGTCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLGAGP*WCCHSQ
Trigger: CTGAGAATGACAACACCATCAAGGACCTGCTCCCAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAGTATTTGAGCACCTaGACCACTAAGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLQYLST*TTKGRR
Trigger: CCTTCTCCCCTTAGTGGTTCAGGTGCTCAAATACTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAGTATTTGAGCACCTaGACCACTAAGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQYLST*TTKGRR
Trigger: CCTTCTCCCCTTAGTGGTTCAGGTGCTCAAATACTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCAGCAGGATCTTGCTaGTATCACAGTCTCGGTATG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLAAGSC*YHSLGM
Trigger: CATACCGAGACTGTGATATCAGCAAGATCCTGCTGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCAGCAGGATCTTGCTaGTATCACAGTCTCGGTATG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAAGSC*YHSLGM
Trigger: CATACCGAGACTGTGATATCAGCAAGATCCTGCTGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGGGGCTTGCAGCTATaGTACTGCGCATTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKWGLQL*YCALSV
Trigger: TACACTCAATGCGCAGTATCATAGCTGCAAGCCCCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACATCTTCGGGAACTTTaGGGAGGACGGTTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVHLREL*GGRFLP
Trigger: GGGCAAAAACCGTCCTCCTCAAAGTTCCCGAAGATG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACTGGGCTTAAGTGAATaGATGTGGAGAGGACCACGA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLGLSE*MWRGPR
Trigger: TCGTGGTCCTCTCCACATTCATTCACTTAAGCCCAG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTATCATGCTTTCTGCTTaGTTAGAAAAGGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTIMLSA*LEKVVL
Trigger: CAGTACTACCTTTTCTAATCAAGCAGAAAGCATGAT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGGAGCTCAGCTCATTaGAGTCCATCAGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPWSSAH*SPSETR
Trigger: CCTCGTCTCTGATGGACTTCAATGAGCTGAGCTCCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATGGAGCTCAGCTCATTaGAGTCCATCAGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVWSSAH*SPSETR
Trigger: CCTCGTCTCTGATGGACTTCAATGAGCTGAGCTCCA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAAAGCTGAGCAGTTTTaGAAATGGTTCCAACAAACT +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTKAEQF*KWFQQT
Trigger: AGTTTGTTGGAACCATTTTCAAAACTGCTCAGCTTT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCAGGTAGGCCAGAGTaGAGACGGCATTCTGAATTA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPGRPE*RRHSEL
Trigger: TAATTCAGAATGCCGTCTTCACTCTGGCCTACCTGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTATGGGCCATTAGCTaGAGGATGCTGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLWAIS*RMLGVT
Trigger: GGTGACACCCAGCATCCTTCAGCTAATGGCCCATAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTCTTAGAGATGGGGTaGGTGGGAATGGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVLEMG*VGMAQE
Trigger: TTCCTGTGCCATTCCCACTCACCCCATCTCTAAGAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCAATGATATCCTTGTaGAGAAATGGAGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSMISL*RNGGKV
Trigger: TACCTTTCCTCCATTTCTGCACAAGGATATCATTGA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGGATTGGATGTGTACTaGATTGCAATCATTAGCATG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREGLDVY*IAIISM
Trigger: CATGCTAATGATTGCAATGCAGTACACATCCAATCC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTCCAAGCTGTGTACTaGAACCCCCTGTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKFQAVY*NPLYSL
Trigger: AAGCGAGTACAGGGGGTTGCAGTACACAGCTTGGAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTCCAAGCTGTGTACTaGAACCCCCTGTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLFQAVY*NPLYSL
Trigger: AAGCGAGTACAGGGGGTTGCAGTACACAGCTTGGAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATTGAGTGGCACCTCTTaGAGTACCGAACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVLSGTS*STEQAC
Trigger: ACAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGTTCTCACTGGGTGTaGAGAGGCTCACTAAGAACC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCSHWV*RGSLRT
Trigger: GGTTCTTAGTGAGCCTCTGCACACCCAGTGAGAACA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGTAAAGCTTGCTCCTaGACAGAGGAGGGGTATCCT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSKACS*TEEGYP
Trigger: AGGATACCCCTCCTCTGTGCAGGAGCAAGCTTTACT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGTAAAGCTTGCTCCTaGACAGAGGAGGGGTATCCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSKACS*TEEGYP
Trigger: AGGATACCCCTCCTCTGTGCAGGAGCAAGCTTTACT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACTCACCCTTCGAGATaGAAGGTTCCCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTHPSR*KVPCQF
Trigger: GAACTGGCAGGGAACCTTGCATCTCGAAGGGTGAGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTACTCACCCTTCGAGATaGAAGGTTCCCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSTHPSR*KVPCQF
Trigger: GAACTGGCAGGGAACCTTGCATCTCGAAGGGTGAGT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGGTTCTCCCCATGCTTaGTTGCAGGATTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSGSPHA*LQDSPP
Trigger: AGGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGTTCTCCCCATGCTTaGTTGCAGGATTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGSPHA*LQDSPP
Trigger: AGGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTTGACATCCTCCACTaGTGTCAGGAAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLVDILH*CQEAAE
Trigger: TTCTGCTGCTTCCTGACAGCAGTGGAGGATGTCAAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAACTTGGGCAATTCCTaGAATGAATGCATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSNLGNS*NECIKA
Trigger: TGCTTTAATGCATTCATTGCAGGAATTGCCCAAGTT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGTCACACCGATCTATaGACGACTTCCTACGATGTT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRACHTDL*TTSYDV
Trigger: AACATCGTAGGAAGTCGTGCATAGATCGGTGTGACA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGGAGGTCTCGTTTTTaGTTCAGCGTCAGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRRSRF*FSVSGL
Trigger: TAGCCCACTGACGCTGAAGCAAAAACGAGACCTCCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTCATCACCGTCGGCTaGTCGTCAGTGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVITVG*SSVNSS
Trigger: TGAAGAGTTCACTGACGAGCAGCCGACGGTGATGAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGTCATCACCGTCGGCTaGTCGTCAGTGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSVITVG*SSVNSS
Trigger: TGAAGAGTTCACTGACGAGCAGCCGACGGTGATGAC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCAACTGATGGAAGATaGAGCGCAGGAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPTDGR*SAGTAW
Trigger: CCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCCAACTGATGGAAGATaGAGCGCAGGAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSPTDGR*SAGTAW
Trigger: CCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTTTGGTTCCAGCATCTaGACAAATAAACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTFGSSI*TNKLNK
Trigger: CTTGTTCAGTTTATTTGTGCAGATGCTGGAACCAAA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAGCGTGTGCATGTCTaGCATGAAATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLQRVHV*HEIQHF
Trigger: GAAGTGCTGGATTTCATGGCAGACATGCACACGCTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAGCGTGTGCATGTCTaGCATGAAATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQRVHV*HEIQHF
Trigger: GAAGTGCTGGATTTCATGGCAGACATGCACACGCTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGTTATCTCTGTGGTTaGCCCGTGAGATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCYLCG*PVRCPW
Trigger: CCATGGACATCTCACGGGGCAACCACAGAGATAACA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGCATTTGGGCACACTaGATTGTGAGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGIWAH*IVSEGT
Trigger: GGTTCCCTCACTCACAATGCAGTGTGCCCAAATGCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAAGAGGGAGCACATGTaGAGCACGGAGGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLKREHM*STEVFD
Trigger: ATCAAAGACCTCCGTGCTGCACATGTGCTCCCTCTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTTTGGTGGACATGGTaGTGTCCAGTTGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLWWTW*CPVGKA
Trigger: AGCCTTTCCAACTGGACAGCACCATGTCCACCAAAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAACGCTAGGTATAGGTaGAGAGAAATCTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRANARYR*REILVL
Trigger: GAGCACCAAGATTTCTCTGCACCTATACCTAGCGTT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGTGTCACAATTCGCTaGACTAAGCAGGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCVTIR*TKQDAA
Trigger: GGCAGCATCCTGCTTAGTCCAGCGAATTGTGACACA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGTGTCACAATTCGCTaGACTAAGCAGGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCVTIR*TKQDAA
Trigger: GGCAGCATCCTGCTTAGTCCAGCGAATTGTGACACA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCAGAGAGGTTAACATaGGCAGGTACACCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAERLT*AGTPSL
Trigger: GAGAGAAGGTGTACCTGCCCATGTTAACCTCTCTGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGTGCTGGCAGTGGATaGGATTCCAAGCTGTGTACT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCAGSG*DSKLCT
Trigger: AGTACACAGCTTGGAATCCCATCCACTGCCAGCACA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGTGCTGGCAGTGGATaGGATTCCAAGCTGTGTACT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCAGSG*DSKLCT
Trigger: AGTACACAGCTTGGAATCCCATCCACTGCCAGCACA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATCAATGTGCTGGCAGTaGATGGGATTCCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSMCWQ*MGFQAV
Trigger: CACAGCTTGGAATCCCATCCACTGCCAGCACATTGA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGAGATACAACGGGGGTaGTTTATCACCCAACGCTAC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLEIQRG*FITQRY
Trigger: GTAGCGTTGGGTGATAAACCACCCCCGTTGTATCTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGATATTTCAGCTTGTaGCAGAAGAACATCAATCAG +
Preference number: 4 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRYFSL*QKNINQ
Trigger: CTGATTGATGTTCTTCTGCCACAAGCTGAAATATCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCTCGCTGCTCAGCATaGAACTCGGCTTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSRCSA*NSASFN
Trigger: GTTGAAAGAAGCCGAGTTCCATGCTGAGCAGCGAGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGCCTATGATAAACTCTaGTCTGGAAGAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAAYDKL*SGRKEA
Trigger: AGCCTCCTTTCTTCCAGACCAGAGTTTATCATAGGC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTACCACAGTATCAAACTaGAAGTCAAGACAAAGACAT +
Preference number: 4 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTTTVSN*KSRQRH
Trigger: ATGTCTTTGTCTTGACTTCCAGTTTGATACTGTGGT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACAATCCAAATGTAGCTaGGCTTCCAAAGAAAGCGTC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAQSKCS*ASKESV
Trigger: GACGCTTTCTTTGGAAGCCCAGCTACATTTGGATTG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACGTCCAGGGTCGTTTaGTCTTTGTGCGATATACGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTSRVV*SLCDIR
Trigger: GCGTATATCGCACAAAGACCAAACGACCCTGGACGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACGTCCAGGGTCGTTTaGTCTTTGTGCGATATACGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTSRVV*SLCDIR
Trigger: GCGTATATCGCACAAAGACCAAACGACCCTGGACGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGCCTTCGAGCATCTaGAAACCCTTCCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRPSSI*KPFHSW
Trigger: CCAGCTATGGAAGGGTTTCCAGATGCTCGAAGGCCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAGGCCTTCGAGCATCTaGAAACCCTTCCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVRPSSI*KPFHSW
Trigger: CCAGCTATGGAAGGGTTTCCAGATGCTCGAAGGCCT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATAGCAGGCTGGATTTaGTGGCACCTCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKIAGWI*WHLSSS
Trigger: TGAGGATGAGAGGTGCCACCAAATCCAGCCTGCTAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATAGCAGGCTGGATTTaGTGGCACCTCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLIAGWI*WHLSSS
Trigger: TGAGGATGAGAGGTGCCACCAAATCCAGCCTGCTAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTGCTGATAGCAGGCTaGATTTGGTGGCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVLIAG*IWWHLS
Trigger: TGAGAGGTGCCACCAAATCCAGCCTGCTATCAGCAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATGGCCCCACAGTCATaGCATTTGTCCGTCATCACC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPMAPQS*HLSVIT
Trigger: GGTGATGACGGACAAATGCCATGACTGTGGGGCCAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGGAGAGGACCACGATaGCTAGCCCAAGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPWRGPR*LAQVSL
Trigger: AAGAGACACTTGGGCTAGCCATCGTGGTCCTCTCCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATGGAGAGGACCACGATaGCTAGCCCAAGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVWRGPR*LAQVSL
Trigger: AAGAGACACTTGGGCTAGCCATCGTGGTCCTCTCCA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGTGGCTCTTCAGTTTaGTCAGCGTGTGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCGSSV*SACACL
Trigger: CAGACATGCACACGCTGACCAAACTGAAGAGCCACA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCTTTGTTATCTCTGTaGTTGCCCCGTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKALLSL*LPREMS
Trigger: GGACATCTCACGGGGCAACCACAGAGATAACAAAGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAGGATAACAATAAGATaGTCTGCAACGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRARITIR*SATWEP
Trigger: AGGCTCCCACGTTGCAGACCATCTTATTGTTATCCT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCAAAGATGAACGCGTaGAAGAGGGAGCACATGTGC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPAKMNA*KREHMC
Trigger: GCACATGTGCTCCCTCTTCCACGCGTTCATCTTTGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGCAAAGATGAACGCGTaGAAGAGGGAGCACATGTGC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSAKMNA*KREHMC
Trigger: GCACATGTGCTCCCTCTTCCACGCGTTCATCTTTGC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCAAGTACCGGATCTTaGAAGCAAACTGCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKASTGS*KQTAPL
Trigger: AAGCGGAGCAGTTTGCTTCCAAGATCCGGTACTTGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACTGCTCCGCTTTGGTaGACATGGTGCTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTAPLW*TWCCPV
Trigger: AACTGGACAGCACCATGTCCACCAAAGCGGAGCAGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGAAATGGCCATCTGGTaGCGTAGTAGTGACACAGTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLEMAIW*RSSDTV
Trigger: AACTGTGTCACTACTACGTCACCAGATGGCCATTTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGGAGAACCCGGTTATaGTATTCCTGCAAGTACCGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPWRTRL*YSCKYR
Trigger: CCGGTACTTGCAGGAATATCATAACCGGGTTCTCCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAAAGAAGGGTAGTCTaGCAACTGAGCATCACGACT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQRRVV*QLSITT
Trigger: AGTCGTGATGCTCAGTTGTCAGACTACCCTTCTTTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATACACCTTCTCTCCTTaGGGAGCCCAATATAGCCAT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKYTFSP*GAQYSH
Trigger: ATGGCTATATTGGGCTCCTCAAGGAGAGAAGGTGTA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATCACCCAACGCTACTaGCAGGGAAGGGTCTATACA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPITQRY*QGRVYT
Trigger: TGTATAGACCCTTCCCTGTCAGTAGCGTTGGGTGAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAATCACCCAACGCTACTaGCAGGGAAGGGTCTATACA +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVITQRY*QGRVYT
Trigger: TGTATAGACCCTTCCCTGTCAGTAGCGTTGGGTGAT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCATTTGGTGACAAACTaGGGCTTCAGCTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLHLVTN*GFSFST
Trigger: GGTGGAAAAGCTGAAGCCTCAGTTTGTCACCAAATG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATCTTCAGCCATTTGGTaGCAAACTGAGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSSAIW*QTEASA
Trigger: AGCTGAAGCCTCAGTTTGTCACCAAATGGCTGAAGA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAAACATCTCCTCCATTaGGAAAGGCAGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKKHLLH*ERQRTE
Trigger: CTCTGTCCTCTGCCTTTCTCAATGGAGGAGATGTTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAAACATCTCCTCCATTaGGAAAGGCAGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLKHLLH*ERQRTE
Trigger: CTCTGTCCTCTGCCTTTCTCAATGGAGGAGATGTTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGTGTCCAAAATTCTTaGAAGGGCTACGAAACGGAC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGVQNS*KGYETD
Trigger: GTCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGGTGTCCAAAATTCTTaGAAGGGCTACGAAACGGAC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLGVQNS*KGYETD
Trigger: GTCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAAAGCGAGCTCTCTTaGTCTTCCATAAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQSELS*SSIRLH
Trigger: ATGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACTGTAATCAGCTGGTaGACTGTCTGGTGGTCGATC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTVISW*TVWWSI
Trigger: GATCGACCACCAGACAGTTCACCAGCTGATTACAGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTTGAGGTGCAATCATaGAGCAACCTTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKFEVQS*SNLPAG
Trigger: ACCAGCAGGAAGGTTGCTTCATGATTGCACCTCAAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGACAAGAGCAGTATTTaGGCACCTGAACCACTAAGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLDKSSI*APEPLR
Trigger: CCTTAGTGGTTCAGGTGCTCAAATACTGCTCTTGTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGCAGCAGGATCTTGCTaGTATCACAGTCTCGGTATG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVAAGSC*YHSLGM
Trigger: CATACCGAGACTGTGATATCAGCAAGATCCTGCTGC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTCGCTGTCGGAGGTTaGGAGTATAGAGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVAVGG*EYRVFF
Trigger: GAAAAACACTCTATACTCTCAACCTCCGACAGCGAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGAGCAAACGACTTCTaGAGGAGGTCTCGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRANDF*RRSRFC
Trigger: GCAAAAACGAGACCTCCTTCAGAAGTCGTTTGCTCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGCCTGGGAACAATCTaGATCTTAAATTCGGATTCC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRACLGTI*ILNSDS
Trigger: GGAATCCGAATTTAAGATTCAGATTGTTCCCAGGCA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTGGGCTTAAGTGAATaGATGTGGAGAGGACCACGA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLGLSE*MWRGPR
Trigger: TCGTGGTCCTCTCCACATTCATTCACTTAAGCCCAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCATGCTTTCTGCTTaGTTAGAAAAGGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREIMLSA*LEKVVL
Trigger: CAGTACTACCTTTTCTAATCAAGCAGAAAGCATGAT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCCAGGTAGGCCAGAGTaGAGACGGCATTCTGAATTA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSPGRPE*RRHSEL
Trigger: TAATTCAGAATGCCGTCTTCACTCTGGCCTACCTGG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTGGTAAAGGAGATTTaGGCTTTAGGGCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLVKEI*ALGPAE
Trigger: TTCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACTGGTAAAGGAGATTTaGGCTTTAGGGCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLVKEI*ALGPAE
Trigger: TTCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAATCCAGCACTTCGTTaGTGTACTGCCTCACACACT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLNPALR*CTASHT
Trigger: AGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAATCCAGCACTTCGTTaGTGTACTGCCTCACACACT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKNPALR*CTASHT
Trigger: AGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAGCACGGAGGTCTTTaGTTGCTCTGGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQHGGL*LLWKSN
Trigger: ATTGGATTTCCAGAGCAATCAAAGACCTCCGTGCTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGCAAGATAGACAAGTaGTCACTGCCAAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSKIDK*SLPRSS
Trigger: GCTGCTTCTTGGCAGTGAGCACTTGTCTATCTTGCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTGTGGCATTCAATGTaGTGGCAGTGGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLWHSM*WQWMGF
Trigger: GAATCCCATCCACTGCCAGCACATTGAATGCCACAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTGTGGCATTCAATGTaGTGGCAGTGGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLWHSM*WQWMGF
Trigger: GAATCCCATCCACTGCCAGCACATTGAATGCCACAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGAAGCAGGTGACAACTaGTCTTCTAACGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKEAGDN*SSNVGT
Trigger: AGTTCCCACGTTAGAAGAGCAGTTGTCACCTGCTTC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGTTCTCACTGGGTGTaGAGAGGCTCACTAAGAACC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPCSHWV*RGSLRT
Trigger: GGTTCTTAGTGAGCCTCTGCACACCCAGTGAGAACA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTGTTCTCACTGGGTGTaGAGAGGCTCACTAAGAACC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSCSHWV*RGSLRT
Trigger: GGTTCTTAGTGAGCCTCTGCACACCCAGTGAGAACA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCAGCTGAGTCACTGTaGTACAGGACTTATCCCAGT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSAESL*YRTYPS
Trigger: ACTGGGATAAGTCCTGTAGCACAGTGACTCAGCTGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATCAGCTGAGTCACTGTaGTACAGGACTTATCCCAGT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSAESL*YRTYPS
Trigger: ACTGGGATAAGTCCTGTAGCACAGTGACTCAGCTGA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAGTAAAGCTTGCTCCTaGACAGAGGAGGGGTATCCT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSKACS*TEEGYP
Trigger: AGGATACCCCTCCTCTGTGCAGGAGCAAGCTTTACT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTTGACATCCTCCACTaGTGTCAGGAAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVDILH*CQEAAE
Trigger: TTCTGCTGCTTCCTGACAGCAGTGGAGGATGTCAAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTTCTGGCGGTTTCTTaGAAAGCGAGCTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLLAVS*KASSLD
Trigger: ATCAAGAGAGCTCGCTTTGCAAGAAACCGCCAGAAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTCGTTTGGTCTTTGTaGGATATACGCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLVVWSL*DIRSLG
Trigger: ACCCAAGCTGCGTATATCGCACAAAGACCAAACGAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGAGGTCTCGTTTTTaGTTCAGCGTCAGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRRSRF*FSVSGL
Trigger: TAGCCCACTGACGCTGAAGCAAAAACGAGACCTCCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTCTGTGGGGTTCTCTaGATCTTCGGGAACTTTGAG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKFCGVL*IFGNFE
Trigger: CTCAAAGTTCCCGAAGATGCAGAGAACCCCACAGAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAATCTTCCCACAGACTaGATGATATCCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLNLPTD*MISSSS
Trigger: GCTGCTGCTGGATATCATGCAGTCTGTGGGAAGATT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATTGAGCTTTAGGGCCTaGAGAAGTTCTAGAACAACA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALSFRA*RSSRTT
Trigger: TGTTGTTCTAGAACTTCTGCAGGCCCTAAAGCTCAA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACTTCGTTGATGTACTaGCTCACACACTCCATCGCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTSLMY*LTHSIA
Trigger: AGCGATGGAGTGTGTGAGGCAGTACATCAACGAAGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAGCGTGTGCATGTCTaGCATGAAATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPQRVHV*HEIQHF
Trigger: GAAGTGCTGGATTTCATGGCAGACATGCACACGCTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGTTTGGTCAGCGTGTaGATGTCTGCCATGAAATCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSLVSV*MSAMKS
Trigger: GGATTTCATGGCAGACATGCACACGCTGACCAAACT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCAAAGGTATCTTCATaGAGAGGCTGGGAACATGTC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPKVSS*RGWEHV
Trigger: GACATGTTCCCAGCCTCTGCATGAAGATACCTTTGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCAAAGGTATCTTCATaGAGAGGCTGGGAACATGTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPKVSS*RGWEHV
Trigger: GACATGTTCCCAGCCTCTGCATGAAGATACCTTTGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGTTATCTCTGTGGTTaGCCCGTGAGATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPCYLCG*PVRCPW
Trigger: CCATGGACATCTCACGGGGCAACCACAGAGATAACA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATGTTATCTCTGTGGTTaGCCCGTGAGATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVCYLCG*PVRCPW
Trigger: CCATGGACATCTCACGGGGCAACCACAGAGATAACA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAACAATAAGATGGTCTaGAACGTGGGAGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLNNKMV*NVGACI
Trigger: GATGCAGGCTCCCACGTTGCAGACCATCTTATTGTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAAGAGGGAGCACATGTaGAGCACGGAGGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPKREHM*STEVFD
Trigger: ATCAAAGACCTCCGTGCTGCACATGTGCTCCCTCTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATATGTTCCCCAACCTaGTTGGATCAAATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCREICSPT*LDQIVC
Trigger: ACAAACAATTTGATCCAAGCAGGTTGGGGAACATAT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGCCCTCTCTGGCCTTTaGACATCTTTTACTAAACTA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAALSGL*TSFTKL
Trigger: TAGTTTAGTAAAAGATGTGCAAAGGCCAGAGAGGGC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGTCCAAGATCGTGTTaGCCGTGCTGTAGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCPRSC*PCCSKG
Trigger: TCCTTTACTACAGCACGGCCAACACGATCTTGGACA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCAGAGAGGTTAACATaGGCAGGTACACCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPAERLT*AGTPSL
Trigger: GAGAGAAGGTGTACCTGCCCATGTTAACCTCTCTGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGCAGAGAGGTTAACATaGGCAGGTACACCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSAERLT*AGTPSL
Trigger: GAGAGAAGGTGTACCTGCCCATGTTAACCTCTCTGC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATTGACAATGATACACTaGATTGGATGTGTACTGCAT +
Preference number: 4 (lower is better)
Translates to: RRNFIWNAQSNARYRCRELTMIH*IGCVLH
Trigger: ATGCAGTACACATCCAATCCAGTGTATCATTGTCAA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATGTGCTGGCAGTGGATaGGATTCCAAGCTGTGTACT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVCAGSG*DSKLCT
Trigger: AGTACACAGCTTGGAATCCCATCCACTGCCAGCACA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCAATGTGCTGGCAGTaGATGGGATTCCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSMCWQ*MGFQAV
Trigger: CACAGCTTGGAATCCCATCCACTGCCAGCACATTGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATCAATGTGCTGGCAGTaGATGGGATTCCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSMCWQ*MGFQAV
Trigger: CACAGCTTGGAATCCCATCCACTGCCAGCACATTGA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGGCATTCAATGTGCTaGCAGTGGATGGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKWHSMC*QWMGFQ
Trigger: TTGGAATCCCATCCACTGCCAGCACATTGAATGCCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGGCATTCAATGTGCTaGCAGTGGATGGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLWHSMC*QWMGFQ
Trigger: TTGGAATCCCATCCACTGCCAGCACATTGAATGCCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGAGATACAACGGGGGTaGTTTATCACCCAACGCTAC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPEIQRG*FITQRY
Trigger: GTAGCGTTGGGTGATAAACCACCCCCGTTGTATCTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTCTCGCTGCTCAGCATaGAACTCGGCTTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSRCSA*NSASFN
Trigger: GTTGAAAGAAGCCGAGTTCCATGCTGAGCAGCGAGA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATGCTGGCCTCTTTATaGTGTCAAGCAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPMLASL*CQAGDQ
Trigger: CTGGTCTCCTGCTTGACACCATAAAGAGGCCAGCAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGAACGTACACTCTTCTaGCGGTTTCTTGCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLERTLF*RFLAKR
Trigger: TCGCTTTGCAAGAAACCGCCAGAAGAGTGTACGTTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGAACGTACACTCTTCTaGCGGTTTCTTGCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKERTLF*RFLAKR
Trigger: TCGCTTTGCAAGAAACCGCCAGAAGAGTGTACGTTC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACGTCCAGGGTCGTTTaGTCTTTGTGCGATATACGC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTSRVV*SLCDIR
Trigger: GCGTATATCGCACAAAGACCAAACGACCCTGGACGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATCGAGGTACTCTCTCTaGATAGCACTGACAGCAATC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSRYSL*IALTAI
Trigger: GATTGCTGTCAGTGCTATCCAGAGAGAGTACCTCGA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGCCGCTTCATTAACTaGCTCATTGTCAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCRFIN*LIVRTP
Trigger: GGGAGTTCTGACAATGAGCCAGTTAATGAAGCGGCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCTTTGATCGTGCTTTaGAACAGCTGCGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSLIVL*NSCGKM
Trigger: CATCTTCCCGCAGCTGTTCCAAAGCACGATCAAAGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGTGGCTCTTCAGTTTaGTCAGCGTGTGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPCGSSV*SACACL
Trigger: CAGACATGCACACGCTGACCAAACTGAAGAGCCACA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTGTGGCTCTTCAGTTTaGTCAGCGTGTGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSCGSSV*SACACL
Trigger: CAGACATGCACACGCTGACCAAACTGAAGAGCCACA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCTTCATGCAGAGGCTaGGAACATGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSSCRG*EHVFMW
Trigger: CCACATGAAGACATGTTCCCAGCCTCTGCATGAAGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGCTTTGTTATCTCTGTaGTTGCCCCGTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSALLSL*LPREMS
Trigger: GGACATCTCACGGGGCAACCACAGAGATAACAAAGC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCTTTGTTATCTCTGTaGTTGCCCCGTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPALLSL*LPREMS
Trigger: GGACATCTCACGGGGCAACCACAGAGATAACAAAGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGCTTTGTTATCTCTGTaGTTGCCCCGTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVALLSL*LPREMS
Trigger: GGACATCTCACGGGGCAACCACAGAGATAACAAAGC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGACAACAGTCGGATATaGGAGACACACTCAATGAAT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRADNSRI*ETHSMN
Trigger: ATTCATTGAGTGTGTCTCCCATATCCGACTGTTGTC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCAAGTACCGGATCTTaGAAGCAAACTGCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPASTGS*KQTAPL
Trigger: AAGCGGAGCAGTTTGCTTCCAAGATCCGGTACTTGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAAAGAAGGGTAGTCTaGCAACTGAGCATCACGACT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPQRRVV*QLSITT
Trigger: AGTCGTGATGCTCAGTTGTCAGACTACCCTTCTTTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCAAAGAAGGGTAGTCTaGCAACTGAGCATCACGACT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSQRRVV*QLSITT
Trigger: AGTCGTGATGCTCAGTTGTCAGACTACCCTTCTTTG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAAAGGTAGCCAACGTTaGTATCATCGTGTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKKGSQR*YHRVGQ
Trigger: TTGCCCTACACGATGATATCAACGTTGGCTACCTTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATACACCTTCTCTCCTTaGGGAGCCCAATATAGCCAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPYTFSP*GAQYSH
Trigger: ATGGCTATATTGGGCTCCTCAAGGAGAGAAGGTGTA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATATTCCGAATTGACTaGGCAGCCTCTGATCGTGTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLIFRID*AASDRV
Trigger: AACACGATCAGAGGCTGCTCAGTCAATTCGGAATAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACATTTGGTGACAAACTaGGGCTTCAGCTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPHLVTN*GFSFST
Trigger: GGTGGAAAAGCTGAAGCCTCAGTTTGTCACCAAATG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCTTCAGCCATTTGGTaGCAAACTGAGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSSAIW*QTEASA
Trigger: AGCTGAAGCCTCAGTTTGTCACCAAATGGCTGAAGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAAACATCTCCTCCATTaGGAAAGGCAGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSKHLLH*ERQRTE
Trigger: CTCTGTCCTCTGCCTTTCTCAATGGAGGAGATGTTT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAAAGCGAGCTCTCTTaGTCTTCCATAAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPQSELS*SSIRLH
Trigger: ATGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGACAAGAGCAGTATTTaGGCACCTGAACCACTAAGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPDKSSI*APEPLR
Trigger: CCTTAGTGGTTCAGGTGCTCAAATACTGCTCTTGTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGACAAGAGCAGTATTTaGGCACCTGAACCACTAAGG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVDKSSI*APEPLR
Trigger: CCTTAGTGGTTCAGGTGCTCAAATACTGCTCTTGTC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGATACTTGTAAAGGATaGCAAGCAAGGCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKDTCKG*QARPST
Trigger: GGTTGAAGGCCTTGCTTGTCATCCTTTACAAGTATC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTCGCTGTCGGAGGTTaGGAGTATAGAGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVAVGG*EYRVFF
Trigger: GAAAAACACTCTATACTCTCAACCTCCGACAGCGAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTGTTCCCTGCTGACTaGTTATTTCCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLVFPAD*LFPESL
Trigger: TAAGGACTCAGGAAATAATCAGTCAGCAGGGAACAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTGTTCCCTGCTGACTaGTTATTTCCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVFPAD*LFPESL
Trigger: TAAGGACTCAGGAAATAATCAGTCAGCAGGGAACAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGGCATTTCCAAAGTTaGAAGTCCTTTAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAWHFQS*KSFSRR
Trigger: CCTTCTACTAAAGGACTTTCAACTTTGGAAATGCCA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAGGCACAAACATACTaGCTATGCTTGGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQAQTY*LCLVLI
Trigger: TATCAGCACCAAGCATAGTCAGTATGTTTGTGCCTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTGGTAAAGGAGATTTaGGCTTTAGGGCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLVKEI*ALGPAE
Trigger: TTCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAATCCAGCACTTCGTTaGTGTACTGCCTCACACACT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVNPALR*CTASHT
Trigger: AGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAATCCAGCACTTCGTTaGTGTACTGCCTCACACACT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSNPALR*CTASHT
Trigger: AGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAGCACGGAGGTCTTTaGTTGCTCTGGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPQHGGL*LLWKSN
Trigger: ATTGGATTTCCAGAGCAATCAAAGACCTCCGTGCTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACAGCACGGAGGTCTTTaGTTGCTCTGGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVQHGGL*LLWKSN
Trigger: ATTGGATTTCCAGAGCAATCAAAGACCTCCGTGCTG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACCGCAGATAAGTGCTTaGTATTTGACTGAATCATTG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAPQISA*YLTESL
Trigger: CAATGATTCAGTCAAATATCAAGCACTTATCTGCGG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGTTCTCGAGAAAGATaGACTCATTGCATGCGACCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCSRER*THCMRP
Trigger: TGGTCGCATGCAATGAGTGCATCTTTCTCGAGAACA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGATCGTGTTGGCCGTaGTGTAGTAAAGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRSCWP*CSKGTR
Trigger: TCTAGTTCCTTTACTACAGCACGGCCAACACGATCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGGATTGGATGTGTACTaGATTGCAATCATTAGCATG +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAGLDVY*IAIISM
Trigger: CATGCTAATGATTGCAATGCAGTACACATCCAATCC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGAAGCAGGTGACAACTaGTCTTCTAACGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPEAGDN*SSNVGT
Trigger: AGTTCCCACGTTAGAAGAGCAGTTGTCACCTGCTTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATCCTTTGATAAGCTGTaGTCTAAACCCATCGTGATT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRASFDKL*SKPIVI
Trigger: AATCACGATGGGTTTAGAGCACAGCTTATCAAAGGA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAAAGACATAGACCCTaGAATGCTGGCCTCTTTATG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLQRHRP*NAGLFM
Trigger: CATAAAGAGGCCAGCATTGCAGGGTCTATGTCTTTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTTCTGGCGGTTTCTTaGAAAGCGAGCTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLLAVS*KASSLD
Trigger: ATCAAGAGAGCTCGCTTTGCAAGAAACCGCCAGAAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGTCACACCGATCTATaGACGACTTCCTACGATGTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCHTDL*TTSYDV
Trigger: AACATCGTAGGAAGTCGTGCATAGATCGGTGTGACA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTCTGTGGGGTTCTCTaGATCTTCGGGAACTTTGAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPFCGVL*IFGNFE
Trigger: CTCAAAGTTCCCGAAGATGCAGAGAACCCCACAGAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGTGAACTCTTCAGGTaGAGGCACAAACATACTGAC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSELFR*RHKHTD
Trigger: GTCAGTATGTTTGTGCCTGCACCTGAAGAGTTCACT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGTGAACTCTTCAGGTaGAGGCACAAACATACTGAC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSELFR*RHKHTD
Trigger: GTCAGTATGTTTGTGCCTGCACCTGAAGAGTTCACT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAAAGGTAGTACTGGATaGCAATCTTCCCACAGACTG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLKGSTG*QSSHRL
Trigger: CAGTCTGTGGGAAGATTGGCATCCAGTACTACCTTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAAAGGTAGTACTGGATaGCAATCTTCCCACAGACTG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKKGSTG*QSSHRL
Trigger: CAGTCTGTGGGAAGATTGGCATCCAGTACTACCTTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGGCTATCATCTGCTTaGTCAGGATTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRLSSA*SGLLTQ
Trigger: CTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACAGAGGCTATCATCTaGTTGCTCAGGATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTEAII*LLRIVD
Trigger: GTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACTTCGTTGATGTACTaGCTCACACACTCCATCGCT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTSLMY*LTHSIA
Trigger: AGCGATGGAGTGTGTGAGGCAGTACATCAACGAAGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAGTTTGGTCAGCGTGTaGATGTCTGCCATGAAATCC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSLVSV*MSAMKS
Trigger: GGATTTCATGGCAGACATGCACACGCTGACCAAACT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCAAAGGTATCTTCATaGAGAGGCTGGGAACATGTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPKVSS*RGWEHV
Trigger: GACATGTTCCCAGCCTCTGCATGAAGATACCTTTGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACGGAGGTCTTTGATTaGTCTGGAAATCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTEVFD*SGNPIR
Trigger: CCTGATTGGATTTCCAGAGCAATCAAAGACCTCCGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATAAAATTGAGAGGCTaGTTCCGAGGACTGGATCTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKIKLRG*FRGLDL
Trigger: GAGATCCAGTCCTCGGAAGCAGCCTCTCAATTTTAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACAGTTGGAAAGGCTTTaGCCCAAAATCTGTGTCGTG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVQLERL*PKICVV
Trigger: CACGACACAGATTTTGGGGCAAAGCCTTTCCAACTG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGTCCAAGATCGTGTTaGCCGTGCTGTAGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPCPRSC*PCCSKG
Trigger: TCCTTTACTACAGCACGGCCAACACGATCTTGGACA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTGTCCAAGATCGTGTTaGCCGTGCTGTAGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSCPRSC*PCCSKG
Trigger: TCCTTTACTACAGCACGGCCAACACGATCTTGGACA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTGGCATTCAATGTGCTaGCAGTGGATGGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSWHSMC*QWMGFQ
Trigger: TTGGAATCCCATCCACTGCCAGCACATTGAATGCCA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAATCCAAATGTAGCTaGGCTTCCAAAGAAAGCGTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQSKCS*ASKESV
Trigger: GACGCTTTCTTTGGAAGCCCAGCTACATTTGGATTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGAACGTACACTCTTCTaGCGGTTTCTTGCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSERTLF*RFLAKR
Trigger: TCGCTTTGCAAGAAACCGCCAGAAGAGTGTACGTTC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATTGTTGTCGAATTTTaGAGGTCAGGGTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLIVVEF*RSGSQG
Trigger: TCCCTGAGACCCTGACCTCCAAAATTCGACAACAAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCGAGGTACTCTCTCTaGATAGCACTGACAGCAATC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSRYSL*IALTAI
Trigger: GATTGCTGTCAGTGCTATCCAGAGAGAGTACCTCGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGCCGCTTCATTAACTaGCTCATTGTCAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPCRFIN*LIVRTP
Trigger: GGGAGTTCTGACAATGAGCCAGTTAATGAAGCGGCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATGCCGCTTCATTAACTaGCTCATTGTCAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVCRFIN*LIVRTP
Trigger: GGGAGTTCTGACAATGAGCCAGTTAATGAAGCGGCA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACGTATTCTTCAAGAATaGCCCCACAGTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRILQE*PHSHGI
Trigger: AATGCCATGACTGTGGGGCCATTCTTGAAGAATACG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCGTATTCTTCAAGAATaGCCCCACAGTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLRILQE*PHSHGI
Trigger: AATGCCATGACTGTGGGGCCATTCTTGAAGAATACG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCTTTGATCGTGCTTTaGAACAGCTGCGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSLIVL*NSCGKM
Trigger: CATCTTCCCGCAGCTGTTCCAAAGCACGATCAAAGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGAACATGTCTTCATGTaGCTCTTCAGTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLEHVFM*LFSLVS
Trigger: GCTGACCAAACTGAAGAGCCACATGAAGACATGTTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCTTCATGCAGAGGCTaGGAACATGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSSCRG*EHVFMW
Trigger: CCACATGAAGACATGTTCCCAGCCTCTGCATGAAGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGGATAACAATAAGATaGTCTGCAACGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRITIR*SATWEP
Trigger: AGGCTCCCACGTTGCAGACCATCTTATTGTTATCCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATTTTCGGCCCTCTCTaGCCTTTGCACATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLIFGPL*PLHIFY
Trigger: GTAAAAGATGTGCAAAGGCCAGAGAGGGCCGAAAAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAAAGACACATGGTCATaGGCACTGTCAAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKKDTWS*ALSNWR
Trigger: CCTCCAATTTGACAGTGCCCATGACCATGTGTCTTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATGGTGCTGTCCAGTTaGAAAGGCTTTGCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPMVLSS*KGFAPK
Trigger: TTTTGGGGCAAAGCCTTTCCAACTGGACAGCACCAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAAAGGTAGCCAACGTTaGTATCATCGTGTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPKGSQR*YHRVGQ
Trigger: TTGCCCTACACGATGATATCAACGTTGGCTACCTTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATTACTGTGATGATTTaGGTGGCACCTCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKITVMI*VAPLAV
Trigger: TACTGCAAGAGGTGCCACTCAAATCATCACAGTAAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATATTCCGAATTGACTaGGCAGCCTCTGATCGTGTT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPIFRID*AASDRV
Trigger: AACACGATCAGAGGCTGCTCAGTCAATTCGGAATAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCCAGACAGATTGATTaGTCACATTATAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPRQID*SHYRGS
Trigger: TGATCCCCTATAATGTGATCAATCAATCTGTCTGGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCCAGACAGATTGATTaGTCACATTATAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPRQID*SHYRGS
Trigger: TGATCCCCTATAATGTGATCAATCAATCTGTCTGGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCTCTAAACCCATCGTaGTTCCATCATCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKALNPS*FHHLVT
Trigger: AGTTACAAGATGATGGAATCACGATGGGTTTAGAGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAGAGGATACTAGACTaGCATAAGTTGCACTCGATT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQRILD*HKLHSI
Trigger: AATCGAGTGCAACTTATGTCAGTCTAGTATCCTCTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAGAGGATACTAGACTaGCATAAGTTGCACTCGATT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLQRILD*HKLHSI
Trigger: AATCGAGTGCAACTTATGTCAGTCTAGTATCCTCTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCGTCTCAAATCTATTaGCAAAGAACTCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPASQIY*QRTPSS
Trigger: TGAGCTGGGAGTTCTTTGTCAATAGATTTGAGACGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGATACTTGTAAAGGATaGCAAGCAAGGCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPDTCKG*QARPST
Trigger: GGTTGAAGGCCTTGCTTGTCATCCTTTACAAGTATC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGTGTTCCCTGCTGACTaGTTATTTCCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSVFPAD*LFPESL
Trigger: TAAGGACTCAGGAAATAATCAGTCAGCAGGGAACAC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGCCTGGGAACAATCTaGATCTTAAATTCGGATTCC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCLGTI*ILNSDS
Trigger: GGAATCCGAATTTAAGATTCAGATTGTTCCCAGGCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTTTGTCCAGAATGTTaGAGGAGATGTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVCPEC*RRCRGT
Trigger: AGTACCTCGACATCTCCTTCAACATTCTGGACAAAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAGGCACAAACATACTaGCTATGCTTGGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPQAQTY*LCLVLI
Trigger: TATCAGCACCAAGCATAGTCAGTATGTTTGTGCCTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCAGGCACAAACATACTaGCTATGCTTGGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSQAQTY*LCLVLI
Trigger: TATCAGCACCAAGCATAGTCAGTATGTTTGTGCCTG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAAAAAGTCCCATCTTTaGTCGTGCTTTGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLKKSHL*SCFGTA
Trigger: AGCTGTTCCAAAGCACGATCAAAGATGGGACTTTTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGCTTGATATTTGACTaGATCATTGGCAACCACATA +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRACLIFD*IIGNHI
Trigger: TATGTGGTTGCCAATGATTCAGTCAAATATCAAGCA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATATACAACTTTTCTGTaGGTACCCACCAGTCTATTT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAYTTFL*VPTSLF
Trigger: AAATAGACTGGTGGGTACTCACAGAAAAGTTGTATA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGATCGTGTTGGCCGTaGTGTAGTAAAGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRSCWP*CSKGTR
Trigger: TCTAGTTCCTTTACTACAGCACGGCCAACACGATCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAGATCGTGTTGGCCGTaGTGTAGTAAAGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVRSCWP*CSKGTR
Trigger: TCTAGTTCCTTTACTACAGCACGGCCAACACGATCT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAAAGACATAGACCCTaGAATGCTGGCCTCTTTATG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPQRHRP*NAGLFM
Trigger: CATAAAGAGGCCAGCATTGCAGGGTCTATGTCTTTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACTTTTTCGCTGTATCTaGTTATGTTACTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALFRCI*LCYCCH
Trigger: GTGACAACAGTAACATAAGCAGATACAGCGAAAAAG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTGTCACACCGATCTATaGACGACTTCCTACGATGTT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSCHTDL*TTSYDV
Trigger: AACATCGTAGGAAGTCGTGCATAGATCGGTGTGACA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTCTGTATCAGATTCTaGACTGGTATCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLFCIRF*TGIRLL
Trigger: GAGAAGCCTGATACCAGTGCAGAATCTGATACAGAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTCTGTATCAGATTCTaGACTGGTATCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKFCIRF*TGIRLL
Trigger: GAGAAGCCTGATACCAGTGCAGAATCTGATACAGAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAGTGAACTCTTCAGGTaGAGGCACAAACATACTGAC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSELFR*RHKHTD
Trigger: GTCAGTATGTTTGTGCCTGCACCTGAAGAGTTCACT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAAAGGTAGTACTGGATaGCAATCTTCCCACAGACTG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSKGSTG*QSSHRL
Trigger: CAGTCTGTGGGAAGATTGGCATCCAGTACTACCTTT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAAAGGTAGTACTGGATaGCAATCTTCCCACAGACTG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVKGSTG*QSSHRL
Trigger: CAGTCTGTGGGAAGATTGGCATCCAGTACTACCTTT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGCTTCCATGAAGGTTaGAATGTTTTCCAAACAGCG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSFHEG*NVFQTA
Trigger: CGCTGTTTGGAAAACATTGCAACCTTCATGGAAGCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTGAGCTTTAGGGCCTaGAGAAGTTCTAGAACAACA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLSFRA*RSSRTT
Trigger: TGTTGTTCTAGAACTTCTGCAGGCCCTAAAGCTCAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGCTATCATCTGCTTaGTCAGGATTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRLSSA*SGLLTQ
Trigger: CTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAGGCTATCATCTGCTTaGTCAGGATTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSRLSSA*SGLLTQ
Trigger: CTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACAGAGGCTATCATCTaGTTGCTCAGGATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTEAII*LLRIVD
Trigger: GTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAACAGAGGCTATCATCTaGTTGCTCAGGATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVTEAII*LLRIVD
Trigger: GTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACGGAGGTCTTTGATTaGTCTGGAAATCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTEVFD*SGNPIR
Trigger: CCTGATTGGATTTCCAGAGCAATCAAAGACCTCCGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAAAAATGGTCGAATTaGATTCCTGCAATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQKWSN*IPAMPP
Trigger: TGGAGGCATTGCAGGAATGCAATTCGACCATTTTTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAAAAATGGTCGAATTaGATTCCTGCAATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLQKWSN*IPAMPP
Trigger: TGGAGGCATTGCAGGAATGCAATTCGACCATTTTTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAATAAAATTGAGAGGCTaGTTCCGAGGACTGGATCTC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVIKLRG*FRGLDL
Trigger: GAGATCCAGTCCTCGGAAGCAGCCTCTCAATTTTAT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATAAAATTGAGAGGCTaGTTCCGAGGACTGGATCTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPIKLRG*FRGLDL
Trigger: GAGATCCAGTCCTCGGAAGCAGCCTCTCAATTTTAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCCCTCTCTGGCCTTTaGACATCTTTTACTAAACTA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLALSGL*TSFTKL
Trigger: TAGTTTAGTAAAAGATGTGCAAAGGCCAGAGAGGGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATGTTCCTTGCAAGCTaGCACTTTTCCCAGGATAAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKMFLAS*HFSQDK
Trigger: TTTATCCTGGGAAAAGTGGCAGCTTGCAAGGAACAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATGAATTCGTGGAAATaGCCATCTGGTGACGTAGTA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKMNSWK*PSGDVV
Trigger: TACTACGTCACCAGATGGCCATTTCCACGAATTCAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGAAACATGAATTCGTaGAAATGGCCATCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGNMNS*KWPSGD
Trigger: GTCACCAGATGGCCATTTCCACGAATTCATGTTTCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCAAGTACCGGATCTTaGAAGCAAGATAGACAAGTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPASTGS*KQDRQV
Trigger: CACTTGTCTATCTTGCTTCCAAGATCCGGTACTTGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CCA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATTGACAATGATACACTaGATTGGATGTGTACTGCAT +
Preference number: 4 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRALTMIH*IGCVLH
Trigger: ATGCAGTACACATCCAATCCAGTGTATCATTGTCAA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACAGGAGGTTTTAAATTaGGCCAGTAGTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKQEVLN*ASSGKA
Trigger: TGCTTTTCCACTACTGGCCCAATTTAAAACCTCCTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAGGAGGTTTTAAATTaGGCCAGTAGTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLQEVLN*ASSGKA
Trigger: TGCTTTTCCACTACTGGCCCAATTTAAAACCTCCTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCATCATATACGCAGTaGAGTGAAACCACTGAAACA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPSYTQ*SETTET
Trigger: TGTTTCAGTGGTTTCACTCCACTGCGTATATGATGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCCTATGATAAACTCTaGTCTGGAAGAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPAYDKL*SGRKEA
Trigger: AGCCTCCTTTCTTCCAGACCAGAGTTTATCATAGGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATTGTTGTCGAATTTTaGAGGTCAGGGTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPIVVEF*RSGSQG
Trigger: TCCCTGAGACCCTGACCTCCAAAATTCGACAACAAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCTTCTCTCACACAGTaGAGAAGGCTGTCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSSLTQ*RRLSCN
Trigger: ATTACAAGACAGCCTTCTCCACTGTGTGAGAGAAGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTTGATATTGAGGAATaGCTACTTGTTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLVDIEE*LLVSGT
Trigger: TGTGCCGGAAACAAGTAGCCATTCCTCAATATCAAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTTGATATTGAGGAATaGCTACTTGTTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVDIEE*LLVSGT
Trigger: TGTGCCGGAAACAAGTAGCCATTCCTCAATATCAAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTGACTCAGCTAGTTTaGTTCCAGCATCTGCACAAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLTQLV*FQHLHK
Trigger: TTTGTGCAGATGCTGGAACCAAACTAGCTGAGTCAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGAACATGTCTTCATGTaGCTCTTCAGTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPEHVFM*LFSLVS
Trigger: GCTGACCAAACTGAAGAGCCACATGAAGACATGTTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGAACATGTCTTCATGTaGCTCTTCAGTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVEHVFM*LFSLVS
Trigger: GCTGACCAAACTGAAGAGCCACATGAAGACATGTTC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGACAACAGTCGGATATaGGAGACACACTCAATGAAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLDNSRI*ETHSMN
Trigger: ATTCATTGAGTGTGTCTCCCATATCCGACTGTTGTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGATAACAATAAGATaGTCTGCAACGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPRITIR*SATWEP
Trigger: AGGCTCCCACGTTGCAGACCATCTTATTGTTATCCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGGAGGAATTTCATTTaGAATGCACAGTCCAACGCT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRRNFI*NAQSNA
Trigger: AGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACGCTTAACAAGGTCTaGGAAAAGTATTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTLNKV*EKYFKV
Trigger: CACCTTGAAATACTTTTCTCAGACCTTGTTAAGCGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCCCAGACAGATTGATTaGTCACATTATAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSPRQID*SHYRGS
Trigger: TGATCCCCTATAATGTGATCAATCAATCTGTCTGGG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAACTCCGATAATACATaGAGCCACAGTAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPNSDNT*SHSKAC
Trigger: GCAAGCTTTACTGTGGCTTCATGTATTATCGGAGTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAACTCCGATAATACATaGAGCCACAGTAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSNSDNT*SHSKAC
Trigger: GCAAGCTTTACTGTGGCTTCATGTATTATCGGAGTT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGCCAGCTCTTTGACTaGATTAACTCCATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCQLFD*INSIRK
Trigger: TTTTCTGATGGAGTTAATTCAGTCAAAGAGCTGGCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGCCAGCTCTTTGACTaGATTAACTCCATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCQLFD*INSIRK
Trigger: TTTTCTGATGGAGTTAATTCAGTCAAAGAGCTGGCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTATTGACTGTTATGTaGATCAGATGCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVLTVM*IRCSRI
Trigger: GATCCTGCTGCATCTGATTCACATAACAGTCAATAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGTATTGACTGTTATGTaGATCAGATGCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSVLTVM*IRCSRI
Trigger: GATCCTGCTGCATCTGATTCACATAACAGTCAATAC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGGCATTTCCAAAGTTaGAAGTCCTTTAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLWHFQS*KSFSRR
Trigger: CCTTCTACTAAAGGACTTTCAACTTTGGAAATGCCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAAAAAGTCCCATCTTTaGTCGTGCTTTGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPKKSHL*SCFGTA
Trigger: AGCTGTTCCAAAGCACGATCAAAGATGGGACTTTTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCGCAGATAAGTGCTTaGTATTTGACTGAATCATTG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLPQISA*YLTESL
Trigger: CAATGATTCAGTCAAATATCAAGCACTTATCTGCGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCGCAGATAAGTGCTTaGTATTTGACTGAATCATTG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPQISA*YLTESL
Trigger: CAATGATTCAGTCAAATATCAAGCACTTATCTGCGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGATTGGATGTGTACTaGATTGCAATCATTAGCATG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGLDVY*IAIISM
Trigger: CATGCTAATGATTGCAATGCAGTACACATCCAATCC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCCTTTGATAAGCTGTaGTCTAAACCCATCGTGATT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSFDKL*SKPIVI
Trigger: AATCACGATGGGTTTAGAGCACAGCTTATCAAAGGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATCCTTTGATAAGCTGTaGTCTAAACCCATCGTGATT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSFDKL*SKPIVI
Trigger: AATCACGATGGGTTTAGAGCACAGCTTATCAAAGGA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGCAACTTTTTCCACTaGTTCAAACCTCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSNFFH*FKPHLP
Trigger: TGGAAGATGAGGTTTGAAGCAGTGGAAAAAGTTGCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGCAACTTTTTCCACTaGTTCAAACCTCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSNFFH*FKPHLP
Trigger: TGGAAGATGAGGTTTGAAGCAGTGGAAAAAGTTGCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGAGCAGGAATATCCTaGTTAAGAAAGTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRAGIS*LRKCKS
Trigger: ACTCTTGCACTTTCTTAAGCAGGATATTCCTGCTCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTCTGTATCAGATTCTaGACTGGTATCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPFCIRF*TGIRLL
Trigger: GAGAAGCCTGATACCAGTGCAGAATCTGATACAGAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGCTTCCATGAAGGTTaGAATGTTTTCCAAACAGCG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSFHEG*NVFQTA
Trigger: CGCTGTTTGGAAAACATTGCAACCTTCATGGAAGCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAAAAATGGTCGAATTaGATTCCTGCAATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPQKWSN*IPAMPP
Trigger: TGGAGGCATTGCAGGAATGCAATTCGACCATTTTTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCCCTCTCTGGCCTTTaGACATCTTTTACTAAACTA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPALSGL*TSFTKL
Trigger: TAGTTTAGTAAAAGATGTGCAAAGGCCAGAGAGGGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTTTGTAATGTTCCTTaGAAGCTGCCACTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLCNVP*KLPLFP
Trigger: TGGGAAAAGTGGCAGCTTGCAAGGAACATTACAAAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATCTTCTGTTAGTCAGTaGATTACAGGGATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSSVSQ*ITGIKR
Trigger: CCTCTTTATCCCTGTAATGCACTGACTAACAGAAGA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAGGAGGTTTTAAATTaGGCCAGTAGTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPQEVLN*ASSGKA
Trigger: TGCTTTTCCACTACTGGCCCAATTTAAAACCTCCTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCATCATATACGCAGTaGAGTGAAACCACTGAAACA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPSYTQ*SETTET
Trigger: TGTTTCAGTGGTTTCACTCCACTGCGTATATGATGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAATAGTCCTTCCTCCTaGGTGTCCAAAATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLNSPSS*VSKILE
Trigger: TTCAAGAATTTTGGACACCCAGGAGGAAGGACTATT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCAGCAGGTGGTTTTTaGTTACTGAGTGAATATCCA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSAGGF*LLSEYP
Trigger: TGGATATTCACTCAGTAACCAAAAACCACCTGCTGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATCACAGTCTCGGTATaGATACTTGTAAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKITVSV*ILVKDD
Trigger: GTCATCCTTTACAAGTATCCATACCGAGACTGTGAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATCACAGTCTCGGTATaGATACTTGTAAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLITVSV*ILVKDD
Trigger: GTCATCCTTTACAAGTATCCATACCGAGACTGTGAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCTTCTCTCACACAGTaGAGAAGGCTGTCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSSLTQ*RRLSCN
Trigger: ATTACAAGACAGCCTTCTCCACTGTGTGAGAGAAGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTATCAGATTCTGCACTaGTATCAGGCTTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLYQILH*YQASHF
Trigger: AAAGTGAGAAGCCTGATACCAGTGCAGAATCTGATA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTTAGTAGAAGGATCTaGATCTTTCTGTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKFSRRI*IFLFSQ
Trigger: CTGGGAGAACAGAAAGATCCAGATCCTTCTACTAAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTTGATATTGAGGAATaGCTACTTGTTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVDIEE*LLVSGT
Trigger: TGTGCCGGAAACAAGTAGCCATTCCTCAATATCAAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTGACTCAGCTAGTTTaGTTCCAGCATCTGCACAAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPLTQLV*FQHLHK
Trigger: TTTGTGCAGATGCTGGAACCAAACTAGCTGAGTCAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGACAACAGTCGGATATaGGAGACACACTCAATGAAT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPDNSRI*ETHSMN
Trigger: ATTCATTGAGTGTGTCTCCCATATCCGACTGTTGTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAAATTGGAGGCATCTTaGTTTTCCTTCTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSKLEAS*FSFFPV
Trigger: CACAGGGAAGAAGGAAAACCAAGATGCCTCCAATTT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACGCTTAACAAGGTCTaGGAAAAGTATTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTLNKV*EKYFKV
Trigger: CACCTTGAAATACTTTTCTCAGACCTTGTTAAGCGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTTGAAGTGGAACCATaGTATCTAACTCCGATAATA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLVEVEP*YLTPII
Trigger: TATTATCGGAGTTAGATATCATGGTTCCACTTCAAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGCCAGCTCTTTGACTaGATTAACTCCATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPCQLFD*INSIRK
Trigger: TTTTCTGATGGAGTTAATTCAGTCAAAGAGCTGGCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGGCATTTCCAAAGTTaGAAGTCCTTTAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPWHFQS*KSFSRR
Trigger: CCTTCTACTAAAGGACTTTCAACTTTGGAAATGCCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATCATGCTTTCTGCTTaGTTAGAAAAGGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLIMLSA*LEKVVL
Trigger: CAGTACTACCTTTTCTAATCAAGCAGAAAGCATGAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAAAGCTGAGCAGTTTTaGAAATGGTTCCAACAAACT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLKAEQF*KWFQQT
Trigger: AGTTTGTTGGAACCATTTTCAAAACTGCTCAGCTTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGCTTGATATTTGACTaGATCATTGGCAACCACATA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLCLIFD*IIGNHI
Trigger: TATGTGGTTGCCAATGATTCAGTCAAATATCAAGCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCGCAGATAAGTGCTTaGTATTTGACTGAATCATTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPPQISA*YLTESL
Trigger: CAATGATTCAGTCAAATATCAAGCACTTATCTGCGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATATACAACTTTTCTGTaGGTACCCACCAGTCTATTT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKYTTFL*VPTSLF
Trigger: AAATAGACTGGTGGGTACTCACAGAAAAGTTGTATA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTATACAACTTTTCTGTaGGTACCCACCAGTCTATTT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLYTTFL*VPTSLF
Trigger: AAATAGACTGGTGGGTACTCACAGAAAAGTTGTATA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATGCTTAACAAGGTCTaGGAAAAGTATTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLMLNKV*EKYFKV
Trigger: CACCTTGAAATACTTTTCTCAGACCTTGTTAAGCAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCAATGATATCCTTGTaGAGAAATGGAGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSMISL*RNGGKV
Trigger: TACCTTTCCTCCATTTCTGCACAAGGATATCATTGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGATTGGATGTGTACTaGATTGCAATCATTAGCATG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPGLDVY*IAIISM
Trigger: CATGCTAATGATTGCAATGCAGTACACATCCAATCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGCTGGTTTGTTAATTaGATTGTGGCATTCAATGTG +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLSWFVN*IVAFNV
Trigger: CACATTGAATGCCACAATGCAATTAACAAACCAGCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGCTGGTTTGTTAATTaGATTGTGGCATTCAATGTG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSWFVN*IVAFNV
Trigger: CACATTGAATGCCACAATGCAATTAACAAACCAGCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATATAAACATTCTCCATaGAGACAGAGAATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKYKHSP*RQRIFR
Trigger: CCTGAAGATTCTCTGTCTGCATGGAGAATGTTTATA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGCAACTTTTTCCACTaGTTCAAACCTCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSNFFH*FKPHLP
Trigger: TGGAAGATGAGGTTTGAAGCAGTGGAAAAAGTTGCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAGAGCAGGAATATCCTaGTTAAGAAAGTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVRAGIS*LRKCKS
Trigger: ACTCTTGCACTTTCTTAAGCAGGATATTCCTGCTCT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAACTTGGGCAATTCCTaGAATGAATGCATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKNLGNS*NECIKA
Trigger: TGCTTTAATGCATTCATTGCAGGAATTGCCCAAGTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTTTTTCGCTGTATCTaGTTATGTTACTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLFRCI*LCYCCH
Trigger: GTGACAACAGTAACATAAGCAGATACAGCGAAAAAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACTTTTTCGCTGTATCTaGTTATGTTACTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLFRCI*LCYCCH
Trigger: GTGACAACAGTAACATAAGCAGATACAGCGAAAAAG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAAACAAAAGCGAGTCTaGATTCCCTATATCAAGAGA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLKQKRV*IPYIKR
Trigger: TCTCTTGATATAGGGAATGCAGACTCGCTTTTGTTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTTGGTTCCAGCATCTaGACAAATAAACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKFGSSI*TNKLNK
Trigger: CTTGTTCAGTTTATTTGTGCAGATGCTGGAACCAAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTCATCTGGTCCAGTGTaGAAGCTACAGTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSSGPV*KLQFSI
Trigger: AATTGAAAACTGTAGCTTGCACACTGGACCAGATGA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATCTTCTGTTAGTCAGTaGATTACAGGGATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSSVSQ*ITGIKR
Trigger: CCTCTTTATCCCTGTAATGCACTGACTAACAGAAGA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAATGATACACTGGATTaGATGTGTACTGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLNDTLD*MCTALQ
Trigger: TTGCAATGCAGTACACATCCAATCCAGTGTATCATT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAATGATACACTGGATTaGATGTGTACTGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKNDTLD*MCTALQ
Trigger: TTGCAATGCAGTACACATCCAATCCAGTGTATCATT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTGACAATGATACACTaGATTGGATGTGTACTGCAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLLTMIH*IGCVLH
Trigger: ATGCAGTACACATCCAATCCAGTGTATCATTGTCAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACACATCTTCACAGCTaGTTTGTTAATTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTHLHS*FVNCIV
Trigger: CACAATGCAATTAACAAACCAGCTGTGAAGATGTGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGATATTTCAGCTTGTaGCAGAAGAACATCAATCAG +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRYFSL*QKNINQ
Trigger: CTGATTGATGTTCTTCTGCCACAAGCTGAAATATCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAATAGTCCTTCCTCCTaGGTGTCCAAAATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPNSPSS*VSKILE
Trigger: TTCAAGAATTTTGGACACCCAGGAGGAAGGACTATT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCAGCAGGTGGTTTTTaGTTACTGAGTGAATATCCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSAGGF*LLSEYP
Trigger: TGGATATTCACTCAGTAACCAAAAACCACCTGCTGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTCAGCAGGTGGTTTTTaGTTACTGAGTGAATATCCA +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSAGGF*LLSEYP
Trigger: TGGATATTCACTCAGTAACCAAAAACCACCTGCTGA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACCACAGTATCAAACTaGAAGTCAAGACAAAGACAT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLTTVSN*KSRQRH
Trigger: ATGTCTTTGTCTTGACTTCCAGTTTGATACTGTGGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACCACAGTATCAAACTaGAAGTCAAGACAAAGACAT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTTVSN*KSRQRH
Trigger: ATGTCTTTGTCTTGACTTCCAGTTTGATACTGTGGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAATCACAGTCTCGGTATaGATACTTGTAAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVITVSV*ILVKDD
Trigger: GTCATCCTTTACAAGTATCCATACCGAGACTGTGAT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTATCACAGTCTCGGTATaGATACTTGTAAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSITVSV*ILVKDD
Trigger: GTCATCCTTTACAAGTATCCATACCGAGACTGTGAT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATATCAGATTCTGCACTaGTATCAGGCTTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPYQILH*YQASHF
Trigger: AAAGTGAGAAGCCTGATACCAGTGCAGAATCTGATA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATATCAGATTCTGCACTaGTATCAGGCTTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVYQILH*YQASHF
Trigger: AAAGTGAGAAGCCTGATACCAGTGCAGAATCTGATA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTTAGTAGAAGGATCTaGATCTTTCTGTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPFSRRI*IFLFSQ
Trigger: CTGGGAGAACAGAAAGATCCAGATCCTTCTACTAAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTTGAAGTGGAACCATaGTATCTAACTCCGATAATA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVEVEP*YLTPII
Trigger: TATTATCGGAGTTAGATATCATGGTTCCACTTCAAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGTTGAAGTGGAACCATaGTATCTAACTCCGATAATA +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVVEVEP*YLTPII
Trigger: TATTATCGGAGTTAGATATCATGGTTCCACTTCAAC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATCATGCTTTCTGCTTaGTTAGAAAAGGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPIMLSA*LEKVVL
Trigger: CAGTACTACCTTTTCTAATCAAGCAGAAAGCATGAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAAAGCTGAGCAGTTTTaGAAATGGTTCCAACAAACT +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSKAEQF*KWFQQT
Trigger: AGTTTGTTGGAACCATTTTCAAAACTGCTCAGCTTT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAAAGCTGAGCAGTTTTaGAAATGGTTCCAACAAACT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPKAEQF*KWFQQT
Trigger: AGTTTGTTGGAACCATTTTCAAAACTGCTCAGCTTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGCTTGATATTTGACTaGATCATTGGCAACCACATA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPCLIFD*IIGNHI
Trigger: TATGTGGTTGCCAATGATTCAGTCAAATATCAAGCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR TCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTATGCTTAACAAGGTCTaGGAAAAGTATTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSMLNKV*EKYFKV
Trigger: CACCTTGAAATACTTTTCTCAGACCTTGTTAAGCAT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCAATGATATCCTTGTaGAGAAATGGAGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPSMISL*RNGGKV
Trigger: TACCTTTCCTCCATTTCTGCACAAGGATATCATTGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATATAAACATTCTCCATaGAGACAGAGAATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPYKHSP*RQRIFR
Trigger: CCTGAAGATTCTCTGTCTGCATGGAGAATGTTTATA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAACTTGGGCAATTCCTaGAATGAATGCATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPNLGNS*NECIKA
Trigger: TGCTTTAATGCATTCATTGCAGGAATTGCCCAAGTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAAACAAAAGCGAGTCTaGATTCCCTATATCAAGAGA +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVKQKRV*IPYIKR
Trigger: TCTCTTGATATAGGGAATGCAGACTCGCTTTTGTTT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAACCATCATGCTTTCTaGTTGATTAGAAAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKNHHAF*LIRKGS
Trigger: ACTACCTTTTCTAATCAAGCAGAAAGCATGATGGTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAACCATCATGCTTTCTaGTTGATTAGAAAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLNHHAF*LIRKGS
Trigger: ACTACCTTTTCTAATCAAGCAGAAAGCATGATGGTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATTTGGTTCCAGCATCTaGACAAATAAACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: THLVQCASYSFQLNCIQVFGSSI*TNKLNK
Trigger: CTTGTTCAGTTTATTTGTGCAGATGCTGGAACCAAA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTTGGTTCCAGCATCTaGACAAATAAACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPFGSSI*TNKLNK
Trigger: CTTGTTCAGTTTATTTGTGCAGATGCTGGAACCAAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR GCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATATGTTCCCCAACCTaGTTGGATCAAATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPICSPT*LDQIVC
Trigger: ACAAACAATTTGATCCAAGCAGGTTGGGGAACATAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAATGATACACTGGATTaGATGTGTACTGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPNDTLD*MCTALQ
Trigger: TTGCAATGCAGTACACATCCAATCCAGTGTATCATT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACACATCTTCACAGCTaGTTTGTTAATTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPTHLHS*FVNCIV
Trigger: CACAATGCAATTAACAAACCAGCTGTGAAGATGTGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTACACATCTTCACAGCTaGTTTGTTAATTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSTHLHS*FVNCIV
Trigger: CACAATGCAATTAACAAACCAGCTGTGAAGATGTGT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAGATATTTCAGCTTGTaGCAGAAGAACATCAATCAG +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSRYFSL*QKNINQ
Trigger: CTGATTGATGTTCTTCTGCCACAAGCTGAAATATCT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CCA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATTAAACTAATCACATaGAGACACACCATTTCTACC +
Preference number: 4 (lower is better)
Translates to: FTKLERECTVPICSPTCLIKLIT*RHTIST
Trigger: GGTAGAAATGGTGTGTCTCCATGTGATTAGTTTAAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATTAAACTAATCACATaGAGACACACCATTTCTACC +
Preference number: 4 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKIKLIT*RHTIST
Trigger: GGTAGAAATGGTGTGTCTCCATGTGATTAGTTTAAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTTCCCCAACCTGCTTaGATCAAATTGTTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPVPQPA*IKLFVF
Trigger: AAAAACAAACAATTTGATCCAAGCAGGTTGGGGAAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATTAAACTAATCACATaGAGACACACCATTTCTACC +
Preference number: 4 (lower is better)
Translates to: CTSFTKLERECTVPICSPIKLIT*RHTIST
Trigger: GGTAGAAATGGTGTGTCTCCATGTGATTAGTTTAAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CCA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTATTAAACTAATCACATaGAGACACACCATTTCTACC +
Preference number: 4 (lower is better)
Translates to: TKVVIIKLTREYSLELMSIKLIT*RHTIST
Trigger: GGTAGAAATGGTGTGTCTCCATGTGATTAGTTTAAT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS GCA 90 bp AGCAGCCCCCGGAGCCTCAGCAGGGTGACCAGAGAGGGACCCAGGTaGGTCCCACGCTTCGTCTCAACCTCGGGGAGGAAGGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SSPRSLSRVTREGPR*VPRFVSTSGRKERE
Trigger: CTCCCTCTCCTTCCTCCCCGAGGTTGAGACGAAGCGTGGGACGCACCTGGGTCCCTCTCTGGTCACCCTGCTGAGGCTCCGGGGGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS TCA 90 bp CTTCCACGGCGCAGACCAGCTCCTCAGCGCCGCATTCCCGCGTGTTaGTGGGCGGAGGAGAGGTCTGATAGAGGTGAGTCTCCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: LPRRRPAPQRRIPAC*WAEERSDRGESPQR
Trigger: CCGCTGCGGAGACTCACCTCTATCAGACCTCTCCTCCGCCCATCAACACGCGGGAATGCGGCGCTGAGGAGCTGGTCTGCGCCGTGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp GGAACAGCTGCGGGAAGATGCCGTTGGGGGCCAACTGATGGAAGATaGAGCGCAGGAACTGCTTGGCCACCCCCGCCGCATTGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: GTAAGRCRWGPTDGR*SAGTAWPPPPHCRE
Trigger: TTCCCGGCAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGGCCCCCAACGGCATCTTCCCGCAGCTGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp ACTGAGTGCACTGCAACCACTTTCGGAGGGCTGCCAGGCCAGCACTaGTCTGGCCCGAGCCCGGCAGCGTCCTTAGGCTGTGGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: TECTATTFGGLPGQH*SGPSPAASLGCGGS
Trigger: TGAACCACCACAGCCTAAGGACGCTGCCGGGCTCGGGCCAGAGCAGTGCTGGCCTGGCAGCCCTCCGAAAGTGGTTGCAGTGCACTCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS TCA 90 bp ATCGTGCTTTGGAACAGCTGCGGGAAGATGCCGTTGGGGGCCAACTaGTGGAAGATGCAGCGCAGGAACTGCTTGGCCACCCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: IVLWNSCGKMPLGAN*WKMQRRNCLATPAA
Trigger: TGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGGCCCCCAACGGCATCTTCCCGCAGCTGTTCCAAAGCACGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp CCCGAGCCCGGCAGCGTCCTTAGGCTGTGGTGGTTCACGTGGTTCTaGATAGCCTGGAGGCGAAGCTGGAGTCCCGCAGATAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PEPGSVLRLWWFTWF*IAWRRSWSPADKCL
Trigger: CAAGCACTTATCTGCGGGACTCCAGCTTCGCCTCCAGGCTATTCAGAACCACGTGAACCACCACAGCCTAAGGACGCTGCCGGGCTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS GCA 90 bp GTGCAGCACGGAGGTCTGAAAAGGAAGAAGACGGCATCAGTGCATTaGATCCCAGCAGGCTGTGGCCCTCCACGGAGTCCTCCCGCATGG +
Preference number: 5 (lower is better)
Translates to: VQHGGLKRKKTASVH*IPAGCGPPRSPPAW
Trigger: CCATGCGGGAGGACTCCGTGGAGGGCCACAGCCTGCTGGGATGCAATGCACTGATGCCGTCTTCTTCCTTTTCAGACCTCCGTGCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CCA 90 bp CCCAGCTGCCGCCGCCGGTTCAGCTCATGTTCTCGCTGCTCAGCATaGAACTCGGCTTCTTTCAACAAGCTGATCACGGCTTCCACGGCG +
Preference number: 5 (lower is better)
Translates to: PSCRRRFSSCSRCSA*NSASFNKLITASTA
Trigger: CGCCGTGGAAGCCGTGATCAGCTTGTTGAAAGAAGCCGAGTTCCATGCTGAGCAGCGAGAACATGAGCTGAACCGGCGGCGGCAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp TGCCGTTGGGGGCCAACTGATGGAAGATGCAGCGCAGGAACTGCTTaGCCACCCCCGCCGCATTGCCGGGAACCATCATGCTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: CRWGPTDGRCSAGTA*PPPPHCREPSCFLL
Trigger: AAGCAGAAAGCATGATGGTTCCCGGCAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGGCCCCCAACGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp CGTCAGTGGGCTACCGCAGGAGAACTCTGGCAGCTCCTCTGGCTTTaGGGATCCTTCGGCGTCCATAGGGTCTTCCAGAGTGATGAGGGC +
Preference number: 5 (lower is better)
Translates to: RQWATAGELWQLLWL*GSFGVHRVFQSDEG
Trigger: GCCCTCATCACTCTGGAAGACCCTATGGACGCCGAAGGATCCTCAAAGCCAGAGGAGCTGCCAGAGTTCTCCTGCGGTAGCCCACTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp GAGGCTGCTTCCGAGGACTGGATCTCCACCTGGGCCATTTTGAACTaGGTGCACTGCAACCACTTTCGGAGGGCTGCCAGGCCAGCACTG +
Preference number: 5 (lower is better)
Translates to: EAASEDWISTWAILN*VHCNHFRRAARPAL
Trigger: CAGTGCTGGCCTGGCAGCCCTCCGAAAGTGGTTGCAGTGCACTCAGTTCAAAATGGCCCAGGTGGAGATCCAGTCCTCGGAAGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS TCA 90 bp GTCAGCTTGCCCTGTCCCAAACCCGAGCTGTCCCCAAGACCAATGTaGCCTCCCAGAACTTGCCGAAGCTCTGTGAAGGTCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: VSLPCPKPELSPRPM*PPRTCRSSVKVPWL
Trigger: GAGCCAGGGGACCTTCACAGAGCTTCGGCAAGTTCTGGGAGGTCACATTGGTCTTGGGGACAGCTCGGGTTTGGGACAGGGCAAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 90 bp GAGGAGAGGCCCAGCTGCCGCCGCCGGTTCAGCTCATGTTCTCGCTaGTCAGCATGGAACTCGGCTTCTTTCAACAAGCTGATCACGGCT +
Preference number: 5 (lower is better)
Translates to: EERPSCRRRFSSCSR*SAWNSASFNKLITA
Trigger: AGCCGTGATCAGCTTGTTGAAAGAAGCCGAGTTCCATGCTGAGCAGCGAGAACATGAGCTGAACCGGCGGCGGCAGCTGGGCCTCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp GGAATGGGCAGGCAGGGAGAGGAGGCATTTGGGCACACTGCATTGTaGGTGAGGGAACCCAGCAGCAGCCAGGACAACAGTCGGATATGG +
Preference number: 5 (lower is better)
Translates to: GMGRQGEEAFGHTAL*VREPSSSQDNSRIW
Trigger: CCATATCCGACTGTTGTCCTGGCTGCTGCTGGGTTCCCTCACTCACAATGCAGTGTGCCCAAATGCCTCCTCTCCCTGCCTGCCCATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS GCA 90 bp CAGGAGACCAGCTCTGGTAGCCACTGCGGGGTTGACATCCTCCACTaGTGTCAGGAAGCAGCAGAAGGCATGTGCCAGGGAGTACTTCAG +
Preference number: 5 (lower is better)
Translates to: QETSSGSHCGVDILH*CQEAAEGMCQGVLQ
Trigger: CTGAAGTACTCCCTGGCACATGCCTTCTGCTGCTTCCTGACAGCAGTGGAGGATGTCAACCCCGCAGTGGCTACCAGAGCTGGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp GTCGAATTTTGGAGGTCAGGGTCTCAGGGAGGGAGAGCGCCCTCTTaGATTCCACAGGCCCTTTCACGCTGTCCCTCAGGGAACGTACAC +
Preference number: 5 (lower is better)
Translates to: VEFWRSGSQGGRAPS*IPQALSRCPSGNVH
Trigger: GTGTACGTTCCCTGAGGGACAGCGTGAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCCTCCCTGAGACCCTGACCTCCAAAATTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
CDS TCA 90 bp AACAATCCTCCACACTTACTTGTACAAGCGGAGCTGTGCTCAGGCTaGGGACGGAGGGATGGCTGGGGACGGAGGGAGAAGAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: NNPPHLLVQAELCSG*GRRDGWGRREKRQH
Trigger: ATGCTGCCTCTTCTCCCTCCGTCCCCAGCCATCCCTCCGTCCTCAGCCTGAGCACAGCTCCGCTTGTACAAGTAAGTGTGGAGGATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp ATTGAGAGGCTGCTTCCGAGGACTGGATCTCCACCTGGGCCATTTTaGACTGAGTGCACTGCAACCACTTTCGGAGGGCTGCCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: IERLLPRTGSPPGPF*TECTATTFGGLPGQ
Trigger: CTGGCCTGGCAGCCCTCCGAAAGTGGTTGCAGTGCACTCAGTTCAAAATGGCCCAGGTGGAGATCCAGTCCTCGGAAGCAGCCTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS GCA 90 bp ACTGTCAGCAATGACTTTCCGCGGAAGAGTTGTTCTCGAGAAAGATaGACTCATTGCATGCGACCACCCGAGGGACGCCGGCCGCCGAAC +
Preference number: 5 (lower is better)
Translates to: TVSNDFPRKSCSRER*THCMRPPEGRRPPN
Trigger: GTTCGGCGGCCGGCGTCCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTCTCGAGAACAACTCTTCCGCGGAAAGTCATTGCTGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS GCA 90 bp TGTCCTGGCGTCTGTTCGGGTGTCCCACCGAGAGCTGGAGCAGACTaGTCATGCCTGGTCAACCTCATAGGAATTTTGGAGGTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CPGVCSGVPPRAGAD*SCLVNLIGILEVRV
Trigger: GACCCTGACCTCCAAAATTCCTATGAGGTTGACCAGGCATGAGCAGTCTGCTCCAGCTCTCGGTGGGACACCCGAACAGACGCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS CCA 90 bp GAATTCGGTCCCGGAAGGTTAGGAAATCGCCCCCGGAGAAATGGGTaGGATTTAATAGGCGGCCAAAGGCTTCCTGTCCGTCCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: EFGPGRLGNRPRRNG*DLIGGQRLPVRPLL
Trigger: CAGGAGGGGACGGACAGGAAGCCTTTGGCCGCCTATTAAATCCCACCCATTTCTCCGGGGGCGATTTCCTAACCTTCCGGGACCGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS TCA 90 bp GAGGTGAGTCTCCGCAGCGGCCCCCACTTCATTACTGTGATGATTTaGGTGGCACCTCTTGCAGTACCGAACAGGCCTGTTTCCGTGACG +
Preference number: 5 (lower is better)
Translates to: EVSLRSGPHFITVMI*VAPLAVPNRPVSVT
Trigger: CGTCACGGAAACAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAAATCATCACAGTAATGAAGTGGGGGCCGCTGCGGAGACTCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp AATGACTTTCCGCGGAAGAGTTGTTCTCGAGAAAGATGCACTCATTaGATGCGACCACCCGAGGGACGCCGGCCGCCGAACGGAAACATG +
Preference number: 5 (lower is better)
Translates to: NDFPRKSCSRERCTH*MRPPEGRRPPNGNM
Trigger: CATGTTTCCGTTCGGCGGCCGGCGTCCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTCTCGAGAACAACTCTTCCGCGGAAAGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS GCA 90 bp CAGCGGCCCCCACTTCATTACTGTGATGATTTGAGTGGCACCTCTTaGAGTACCGAACAGGCCTGTTTCCGTGACGACCACAGCACCCTG +
Preference number: 5 (lower is better)
Translates to: QRPPLHYCDDLSGTS*STEQACFRDDHSTL
Trigger: CAGGGTGCTGTGGTCGTCACGGAAACAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAAATCATCACAGTAATGAAGTGGGGGCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp ATCATTCTTTACTGCAGCATGTTCCACGGGCTCGGTGCAGTTGCCTaGGTTCTCCCCATGCTTGCTTGCAGGATTCTCCTCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: IILYCSMFHGLGAVA*VLPMLACRILLLLP
Trigger: GGGGAGGAGGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAACATGCTGCAGTAAAGAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp TGCAGAATTCGGTCCCGGAAGGTTAGGAAATCGCCCCCGGAGAAATaGGTGGGATTTAATAGGCGGCCAAAGGCTTCCTGTCCGTCCCCT +
Preference number: 5 (lower is better)
Translates to: CRIRSRKVRKSPPEK*VGFNRRPKASCPSP
Trigger: AGGGGACGGACAGGAAGCCTTTGGCCGCCTATTAAATCCCACCCATTTCTCCGGGGGCGATTTCCTAACCTTCCGGGACCGAATTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS TCA 90 bp AGTGACAGGGCATGGAGGAGAAGAGGGACTGCCAGGGAAGACAGCTaGGAGAACTCGGATTTGACGACCCTCCACAGGCTTGCAATCAAC +
Preference number: 5 (lower is better)
Translates to: SDRAWRRRGTAREDS*ENSDLTTLHRLAIN
Trigger: GTTGATTGCAAGCCTGTGGAGGGTCGTCAAATCCGAGTTCTCTCAGCTGTCTTCCCTGGCAGTCCCTCTTCTCCTCCATGCCCTGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp CAGAACTTGCCGAAGCTCTGTGAAGGTCCCCTGGCTCCTCGGAGCTaGTTAGTACCAATGTGTCCGGTTTGCCTGCACAGGCTCATGACT +
Preference number: 5 (lower is better)
Translates to: QNLPKLCEGPLAPRS*LVPMCPVCLHRLMT
Trigger: AGTCATGAGCCTGTGCAGGCAAACCGGACACATTGGTACTAATCAGCTCCGAGGAGCCAGGGGACCTTCACAGAGCTTCGGCAAGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS TCA 90 bp TGTCCCCAAGACCAATGTGACCTCCCAGAACTTGCCGAAGCTCTGTaGAGGTCCCCTGGCTCCTCGGAGCTGATTAGTACCAATGTGTCC +
Preference number: 5 (lower is better)
Translates to: CPQDQCDLPELAEAL*RSPGSSELISTNVS
Trigger: GGACACATTGGTACTAATCAGCTCCGAGGAGCCAGGGGACCTTCACAGAGCTTCGGCAAGTTCTGGGAGGTCACATTGGTCTTGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 90 bp CGGTATCATTCTTTACTGCAGCATGTTCCACGGGCTCGGTGCAGTTaGCTGGGTTCTCCCCATGCTTGCTTGCAGGATTCTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RYHSLLQHVPRARCS*LGSPHACLQDSPPP
Trigger: AGGAGGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAACATGCTGCAGTAAAGAATGATACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCAGCGCAGGAACTGCTaGGCCACCCCCGCCGCATTG +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCQRRNC*ATPAAL
Trigger: CAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp AGGCAGATAGCGGATCACAGCTTTGTTATCTCTGTGGTTGCCCCGTaGGATGTCCATGGCTGCAATCTGGGCCAGCCCCACTTTGAGATG +
Preference number: 5 (lower is better)
Translates to: RQIADHSFVISVVAP*DVHGCNLGQPHFEM
Trigger: CATCTCAAAGTGGGGCTGGCCCAGATTGCAGCCATGGACATCTCACGGGGCAACCACAGAGATAACAAAGCTGTGATCCGCTATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp CGACGGCACTTTGCTCGCAATAAACTGTCCACAGCTGAGCAAAGATaGACGCGTGGAAGAGGGAGCACATGTGCAGCACGGAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RRHFARNKLSTAEQR*TRGRGSTCAARRSL
Trigger: CAAAGACCTCCGTGCTGCACATGTGCTCCCTCTTCCACGCGTTCATCTTTGCTCAGCTGTGGACAGTTTATTGCGAGCAAAGTGCCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp AAGATGAACGCGTGGAAGAGGGAGCACATGTGCAGCACGGAGGTCTaGAAAGGAAGAAGACGGCATCAGTGCATTGCATCCCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: KMNAWKREHMCSTEV*KGRRRHQCIASQQA
Trigger: AGCCTGCTGGGATGCAATGCACTGATGCCGTCTTCTTCCTTTTCAGACCTCCGTGCTGCACATGTGCTCCCTCTTCCACGCGTTCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS TCA 90 bp CGACGGCACTTTGCTCGCAATAAACTGTCCACAGCTGAGCAAAGATaGACGCGTGGAAGAGGGAGCACATGTGCAGCACGGAGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: RRHFARNKLSTAEQR*TRGRGSTCAARRSE
Trigger: TTCAGACCTCCGTGCTGCACATGTGCTCCCTCTTCCACGCGTTCATCTTTGCTCAGCTGTGGACAGTTTATTGCGAGCAAAGTGCCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 90 bp AAAGCCAAGGCAGATAGCGGATCACAGCTTTGTTATCTCTGTGGTTaGCCCGTGAGATGTCCATGGCTGCAATCTGGGCCAGCCCCACTT +
Preference number: 5 (lower is better)
Translates to: KAKADSGSQLCYLCG*PVRCPWLQSGPAPL
Trigger: AAGTGGGGCTGGCCCAGATTGCAGCCATGGACATCTCACGGGGCAACCACAGAGATAACAAAGCTGTGATCCGCTATCTGCCTTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp CGACCACCCGAGGGACGCCGGCCGCCGAACGGAAACATGAATTCGTaGAAATGGCCATCTGGTGACGTAGTAGTGACACAGTTCTTATAT +
Preference number: 5 (lower is better)
Translates to: RPPEGRRPPNGNMNS*KWPSGDVVVTQFLY
Trigger: ATATAAGAACTGTGTCACTACTACGTCACCAGATGGCCATTTCCACGAATTCATGTTTCCGTTCGGCGGCCGGCGTCCCTCGGGTGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS CCA 90 bp AGGAGATTGTTGTCCTGGCGTCTGTTCGGGTGTCCCACCGAGAGCTaGAGCAGACTGCTCATGCCTGGTCAACCTCATAGGAATTTTGGA +
Preference number: 5 (lower is better)
Translates to: RRLLSWRLFGCPTES*SRLLMPGQPHRNFG
Trigger: TCCAAAATTCCTATGAGGTTGACCAGGCATGAGCAGTCTGCTCCAGCTCTCGGTGGGACACCCGAACAGACGCCAGGACAACAATCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCCGCATTCCCGCGTGTaGATGGGCGGAGGAGAGGTC +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTPHSRV*MGGGEV
Trigger: GACCTCTCCTCCGCCCATCAACACGCGGGAATGCGG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp CTTTCATCCTTGGCCATGAACTTCATGAGCACTGTAATCAGCTGGTaGACTGTCTGGTGGTCGATCCCAGCGTCTTCTGGGAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LSSLAMNFMSTVISW*TVWWSIPASSGSRS
Trigger: GGACCTGCTCCCAGAAGACGCTGGGATCGACCACCAGACAGTTCACCAGCTGATTACAGTGCTCATGAAGTTCATGGCCAAGGATGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp CAGGTGTCGCTTGACCGTGTTGAAGGCCTTTGCACTGCTGATGTCTaGCTCAGCGCTGCTTTCATCCTTGGCCATGAACTTCATGAGCAC +
Preference number: 5 (lower is better)
Translates to: QVSLDRVEGLCTADV*LSAAFILGHELHEH
Trigger: GTGCTCATGAAGTTCATGGCCAAGGATGAAAGCAGCGCTGAGTCAGACATCAGCAGTGCAAAGGCCTTCAACACGGTCAAGCGACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp CGCCTTGGTTCATCGTCTCCTCTTCTTCGTCACTCTCGACTATTCTaGGAGGGGGAAGAGGCTCAAATACAAGAGAGTCGCTGTCGGAGG +
Preference number: 5 (lower is better)
Translates to: RLGSSSPLLRHSRLF*EGEEAQIQESRCRR
Trigger: CCTCCGACAGCGACTCTCTTGTATTTGAGCCTCTTCCCCCTCTCAGAATAGTCGAGAGTGACGAAGAAGAGGAGACGATGAACCAAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp GAACTGTCTGGTGGTCGATCCCAGCGTCTTCTGGGAGCAGGTCCTTaGTGGTGTTGTCATTCTCAGGAGATTGTTGTCCTGGCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: ELSGGRSQRLLGAGP*WCCHSQEIVVLASV
Trigger: AACAGACGCCAGGACAACAATCTCCTGAGAATGACAACACCATCAAGGACCTGCTCCCAGAAGACGCTGGGATCGACCACCAGACAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS GCA 90 bp CGTAGCAGAGTTCTGTCTAGAACGTCCAGGGTCGTTTGGTCTTTGTaGGATATACGCAGCTTGGGTCGGAGGCTTCTCTATGTCACACCG +
Preference number: 5 (lower is better)
Translates to: RSRVLSRTSRVVWSL*DIRSLGRRLLYVTP
Trigger: CGGTGTGACATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCACAAAGACCAAACGACCCTGGACGTTCTAGACAGAACTCTGCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp AGCGTGTGCATGTCTGCCATGAAATCCAGCACTTCGTTGATGTACTaGCTCACACACTCCATCGCTGCAGTCCCACATCCAGGTACAGAG +
Preference number: 5 (lower is better)
Translates to: SVCMSAMKSSTSLMY*LTHSIAAVPHPGTE
Trigger: CTCTGTACCTGGATGTGGGACTGCAGCGATGGAGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATTTCATGGCAGACATGCACACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp TTATCATCGTCCTTGTTATCAAAGTCAGCATTATCCAGGGAATGGTaGGAAGAGGAGAGGCCCAGCTGCCGCCGCCGGTTCAGCTCATGT +
Preference number: 5 (lower is better)
Translates to: LSSSLLSKSALSREW*EEERPSCRRRFSSC
Trigger: ACATGAGCTGAACCGGCGGCGGCAGCTGGGCCTCTCCTCTTCCCACCATTCCCTGGATAATGCTGACTTTGATAACAAGGACGATGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp TGTTTATCATCGTCCTTGTTATCAAAGTCAGCATTATCCAGGGAATaGTGGGAAGAGGAGAGGCCCAGCTGCCGCCGCCGGTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: CLSSSLLSKSALSRE*WEEERPSCRRRFSS
Trigger: TGAGCTGAACCGGCGGCGGCAGCTGGGCCTCTCCTCTTCCCACCATTCCCTGGATAATGCTGACTTTGATAACAAGGACGATGATAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp GCTTTTCCACCAGACTTCCCACTTCATCATCCATCATATACGCAGTaGAGTGAAACCACTGAAACACCATGGCCACCAGCCGGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: AFPPDFPLHHPSYTQ*SETTETPWPPAGPS
Trigger: GCTTGGCCCGGCTGGTGGCCATGGTGTTTCAGTGGTTTCACTCCACTGCGTATATGATGGATGATGAAGTGGGAAGTCTGGTGGAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp TCCACAGGCCCTTTCACGCTGTCCCTCAGGGAACGTACACTCTTCTaGCGGTTTCTTGCAAAGCGAGCTCTCTTGATCTTCCATAAGGCT +
Preference number: 5 (lower is better)
Translates to: STGPFTLSLRERTLF*RFLAKRALLIFHKA
Trigger: AGCCTTATGGAAGATCAAGAGAGCTCGCTTTGCAAGAAACCGCCAGAAGAGTGTACGTTCCCTGAGGGACAGCGTGAAAGGGCCTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp GTCAGGCCTCGTAGCAGAGTTCTGTCTAGAACGTCCAGGGTCGTTTaGTCTTTGTGCGATATACGCAGCTTGGGTCGGAGGCTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: VRPRSRVLSRTSRVV*SLCDIRSLGRRLLY
Trigger: ATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCACAAAGACCAAACGACCCTGGACGTTCTAGACAGAACTCTGCTACGAGGCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp GAGGGAGAAGAGGCAGCATTTTTACCGGAGGGGCCGTCATCGCCTTaGTTCATCGTCTCCTCTTCTTCGTCACTCTCGACTATTCTGAGA +
Preference number: 5 (lower is better)
Translates to: EGEEAAFLPEGPSSP*FIVSSSSSLSTILR
Trigger: TCTCAGAATAGTCGAGAGTGACGAAGAAGAGGAGACGATGAACCAAGGCGATGACGGCCCCTCCGGTAAAAATGCTGCCTCTTCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp CTCACTGCCAAGAAGCAGCCACCGGAATGCCAGGACTGTCAGCAATaGCTTTCCGCGGAAGAGTTGTTCTCGAGAAAGATGCACTCATTG +
Preference number: 5 (lower is better)
Translates to: LTAKKQPPECQDCQQ*LSAEELFSRKMHSL
Trigger: CAATGAGTGCATCTTTCTCGAGAACAACTCTTCCGCGGAAAGTCATTGCTGACAGTCCTGGCATTCCGGTGGCTGCTTCTTGGCAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS GCA 90 bp CCATCGCTGCAGTCCCACATCCAGGTACAGAGGCTATCATCTGCTTaGTCAGGATTGTTGACTCAGCTAGTTTGGTTCCAGCATCTGCAC +
Preference number: 5 (lower is better)
Translates to: PSLQSHIQVQRLSSA*SGLLTQLVWFQHLH
Trigger: GTGCAGATGCTGGAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGTACCTGGATGTGGGACTGCAGCGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp ATCTGGGCCAGCCCCACTTTGAGATGTCCCCCAAAGGTATCTTCATaGAGAGGCTGGGAACATGTCTTCATGTGGCTCTTCAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: IWASPTLRCPPKVSS*RGWEHVFMWLFSLV
Trigger: GACCAAACTGAAGAGCCACATGAAGACATGTTCCCAGCCTCTGCATGAAGATACCTTTGGGGGACATCTCAAAGTGGGGCTGGCCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp AGTACCGGATCTTGGAAGCAAACTGCTCCGCTTTGGTGGACATGGTaGTGTCCAGTTGGAAAGGCTTTGCCCCAAAATCTGTGTCGTGTG +
Preference number: 5 (lower is better)
Translates to: STGSWKQTAPLWWTW*CPVGKALPQNLCRV
Trigger: CACACGACACAGATTTTGGGGCAAAGCCTTTCCAACTGGACAGCACCATGTCCACCAAAGCGGAGCAGTTTGCTTCCAAGATCCGGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553484.5
ENST00000555664.5
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp CCCGAGGGACGCCGGCCGCCGAACGGAAACATGAATTCGTGGAAATaGCCATCTGGTGACGTAGTAGTGACACAGTTCTTATATTCTGAT +
Preference number: 5 (lower is better)
Translates to: PEGRRPPNGNMNSWK*PSGDVVVTQFLYSD
Trigger: ATCAGAATATAAGAACTGTGTCACTACTACGTCACCAGATGGCCATTTCCACGAATTCATGTTTCCGTTCGGCGGCCGGCGTCCCTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS CCA 90 bp CTAGAACGTCCAGGGTCGTTTGGTCTTTGTGCGATATACGCAGCTTaGGTCGGAGGCTTCTCTATGTCACACCGATCTATGCACGACTTC +
Preference number: 5 (lower is better)
Translates to: LERPGSFGLCAIYAA*VGGFSMSHRSMHDF
Trigger: GAAGTCGTGCATAGATCGGTGTGACATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCACAAAGACCAAACGACCCTGGACGTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp CTCTGGTATGACAGGCCTTCGAGCATCTGGAAACCCTTCCATAGCTaGGTTCTCGGGGATTTCACTATTGTCAGGCCTCGTAGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LWYDRPSSIWKPFHS*VLGDFTIVRPRSRV
Trigger: AACTCTGCTACGAGGCCTGACAATAGTGAAATCCCCGAGAACCCAGCTATGGAAGGGTTTCCAGATGCTCGAAGGCCTGTCATACCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGGGAGAGCGCCCTCTaGGATTCCACAGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCRESAL*DSTGPF
Trigger: GAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCCT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGGGGCCGTCATCGCCTaGGTTCATCGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTGAVIA*VHRLLF
Trigger: GAAGAGGAGACGATGAACCAAGGCGATGACGGCCCC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACAGCGCAGGAACTGCTaGGCCACCCCCGCCGCATTG +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAQRRNC*ATPAAL
Trigger: CAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp ATTGCCATTTATGATTGTCCAGAAGATGTCAGCACCATGAGGAAGTaGCAGGGCATGGAGGAGAAGAGGGACTGCCAGGGAAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: IAIYDCPEDVSTMRK*QGMEEKRDCQGRQL
Trigger: CAGCTGTCTTCCCTGGCAGTCCCTCTTCTCCTCCATGCCCTGTCACTTCCTCATGGTGCTGACATCTTCTGGACAATCATAAATGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp GAACTGTCTGGTGGTCGATCCCAGCGTCTTCTGGGAGCAGGTCCTTaGTGGTGTTGTCATTCTCAGGAGATTGTTGTCGAATTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: ELSGGRSQRLLGAGP*WCCHSQEIVVEFWR
Trigger: CCTCCAAAATTCGACAACAATCTCCTGAGAATGACAACACCATCAAGGACCTGCTCCCAGAAGACGCTGGGATCGACCACCAGACAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
CDS GCA 90 bp CACTCCATCGCTGCAGTCCCACATCCAGGTACAGAGGCTATCATCTaGTTGCTCAGGATTGTTGACTCAGCTAGTTTGGTTCCAGCATCT +
Preference number: 5 (lower is better)
Translates to: HSIAAVPHPGTEAII*LLRIVDSASLVPAS
Trigger: AGATGCTGGAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGTACCTGGATGTGGGACTGCAGCGATGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp TGTAATCAGCTGGTGAACTGTCTGGTGGTCGATCCCAGCGTCTTCTaGGAGCAGGTCCTTGATGGTGTTGTCATTCTCAGGAGATTGTTG +
Preference number: 5 (lower is better)
Translates to: CNQLVNCLVVDPSVF*EQVLDGVVILRRLL
Trigger: CAACAATCTCCTGAGAATGACAACACCATCAAGGACCTGCTCCCAGAAGACGCTGGGATCGACCACCAGACAGTTCACCAGCTGATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp CCCAGTTTGTCCAGAATGTTGAAGGAGATGTCGAGGTACTCTCTCTaGATAGCACTGACAGCAATCTTCCTCTGCTTCCTCTGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PSLSRMLKEMSRYSL*IALTAIFLCFLCLG
Trigger: TCCCAGGCAGAGGAAGCAGAGGAAGATTGCTGTCAGTGCTATCCAGAGAGAGTACCTCGACATCTCCTTCAACATTCTGGACAAACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp CTGATTAGTACCAATGTGTCCGGTTTGCCTGCACAGGCTCATGACTaGTGCCTGCCTTGGGTCTACTTTCTTCCTTTAGCACATCACCTG +
Preference number: 5 (lower is better)
Translates to: LISTNVSGLPAQAHD*CLPWVYFLPLAHHL
Trigger: CAGGTGATGTGCTAAAGGAAGAAAGTAGACCCAAGGCAGGCACCAGTCATGAGCCTGTGCAGGCAAACCGGACACATTGGTACTAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGGGAGAGCGCCCTCTaGGATTCCACAGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCRERESAL*DSTGPF
Trigger: GAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCCACAGTCATGGCATTaGTCCGTCATCACCGTCGGC +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCPQSWH*SVITVG
Trigger: GCCGACGGTGATGACGGACAAATGCCATGACTGTGG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCCACAGTCATGGCATTaGTCCGTCATCACCGTCGGC +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTPQSWH*SVITVG
Trigger: GCCGACGGTGATGACGGACAAATGCCATGACTGTGG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTGGGCCAGCCCCACTTaGAGATGTCCCCCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSWASPT*RCPPKV
Trigger: TACCTTTGGGGGACATCTCAAAGTGGGGCTGGCCCA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS GCA 90 bp ATTAGTACCAATGTGTCCGGTTTGCCTGCACAGGCTCATGACTGGTaGCTGCCTTGGGTCTACTTTCTTCCTTTAGCACATCACCTGTCT +
Preference number: 5 (lower is better)
Translates to: ISTNVSGLPAQAHDW*LPWVYFLPLAHHLS
Trigger: AGACAGGTGATGTGCTAAAGGAAGAAAGTAGACCCAAGGCAGGCACCAGTCATGAGCCTGTGCAGGCAAACCGGACACATTGGTACTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CCA 90 bp GAGGTCTTTGATTGCTCTGGAAATCCAATCAGGATAACAATAAGATaGTCTGCAACGTGGGAGCCTGCATCCAGAGGAATGGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EVFDCSGNPIRITIR*SATWEPASRGMGRQ
Trigger: CTGCCTGCCCATTCCTCTGGATGCAGGCTCCCACGTTGCAGACCATCTTATTGTTATCCTGATTGGATTTCCAGAGCAATCAAAGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp AATGTGTCCGGTTTGCCTGCACAGGCTCATGACTGGTGCCTGCCTTaGGTCTACTTTCTTCCTTTAGCACATCACCTGTCTCTGCAATTT +
Preference number: 5 (lower is better)
Translates to: NVSGLPAQAHDWCLP*VYFLPLAHHLSLQF
Trigger: AAATTGCAGAGACAGGTGATGTGCTAAAGGAAGAAAGTAGACCCAAGGCAGGCACCAGTCATGAGCCTGTGCAGGCAAACCGGACACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTTTGAGTGGCACCTCTaGCAGTACCGAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSFEWHL*QYRTGL
Trigger: CAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAAA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTGTCGCTTGACCGTGTaGAAGGCCTTTGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCCRLTV*KAFALL
Trigger: CAGCAGTGCAAAGGCCTTCAACACGGTCAAGCGACA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTGTCGCTTGACCGTGTaGAAGGCCTTTGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTCRLTV*KAFALL
Trigger: CAGCAGTGCAAAGGCCTTCAACACGGTCAAGCGACA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGCAACGAGGCGGCTGTaGGAAATAATGCCGGAGTTG +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTATRRL*EIMPEL
Trigger: CAACTCCGGCATTATTTCCAACAGCCGCCTCGTTGC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGCAACGAGGCGGCTGTaGGAAATAATGCCGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCATRRL*EIMPEL
Trigger: CAACTCCGGCATTATTTCCAACAGCCGCCTCGTTGC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAGCGCAGGAACTGCTaGGCCACCCCCGCCGCATTG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLQRRNC*ATPAAL
Trigger: CAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAGGGAGAGGAGGCATTaGGGCACACTGCATTGTGAG +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTRERRH*GTLHCE
Trigger: CTCACAATGCAGTGTGCCCAAATGCCTCCTCTCCCT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGGGAGAGGAGGCATTaGGGCACACTGCATTGTGAG +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRERRH*GTLHCE
Trigger: CTCACAATGCAGTGTGCCCAAATGCCTCCTCTCCCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGCTCCGCCAGCGATGTaGCGAGGAAAAGAGTGCATA +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTAPPAM*RGKECI
Trigger: TATGCACTCTTTTCCTCGCAACATCGCTGGCGGAGC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp GCACTGACAGCAATCTTCCTCTGCTTCCTCTGCCTGGGAACAATCTaGATCTTAAATTCGGATTCCTCAGCTCCATCCTCTTCCACCTTC +
Preference number: 5 (lower is better)
Translates to: ALTAIFLCFLCLGTI*ILNSDSSAPSSSTF
Trigger: GAAGGTGGAAGAGGATGGAGCTGAGGAATCCGAATTTAAGATTCAGATTGTTCCCAGGCAGAGGAAGCAGAGGAAGATTGCTGTCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp CACATCTTCACAGCTGGTTTGTTAATTGCATTGTGGCATTCAATGTaGTGGCAGTGGATGGGATTCCAAGCTGTGTACTGCAACCCCCTG +
Preference number: 5 (lower is better)
Translates to: HIFTAGLLIALWHSM*WQWMGFQAVYCNPL
Trigger: CAGGGGGTTGCAGTACACAGCTTGGAATCCCATCCACTGCCAGCACATTGAATGCCACAATGCAATTAACAAACCAGCTGTGAAGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp TTCGCTGTATCTGCTTATGTTACTGTTGTCACTGTACAAAGGTCCTaGCGTGGCATGGGGCTTGCAGCTATGATACTGCGCATTGAGTGT +
Preference number: 5 (lower is better)
Translates to: FAVSAYVTVVTVQRS*RGMGLAAMILRIEC
Trigger: ACACTCAATGCGCAGTATCATAGCTGCAAGCCCCATGCCACGGCAGGACCTTTGTACAGTGACAACAGTAACATAAGCAGATACAGCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp ACATGTCTTCATGTGGCTCTTCAGTTTGGTCAGCGTGTGCATGTCTaGCATGAAATCCAGCACTTCGTTGATGTACTGCCTCACACACTC +
Preference number: 5 (lower is better)
Translates to: TCLHVALQFGQRVHV*HEIQHFVDVLPHTL
Trigger: GAGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATTTCATGGCAGACATGCACACGCTGACCAAACTGAAGAGCCACATGAAGACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp CTTACCTTTGATTGCTCTGGAAATCCAATCAGGATAACAATAAGATaGTCTGCAACGTGGGAGCCTGCATCCAGAGGAATGGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LTFDCSGNPIRITIR*SATWEPASRGMGRQ
Trigger: CTGCCTGCCCATTCCTCTGGATGCAGGCTCCCACGTTGCAGACCATCTTATTGTTATCCTGATTGGATTTCCAGAGCAATCAAAGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCGCATTCCCGCGTGTaGATGGGCGGAGGAGAGGTC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLPHSRV*MGGGEV
Trigger: GACCTCTCCTCCGCCCATCAACACGCGGGAATGCGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACGGGCTCGGTGCAGTaGCCTGGGTTCTCCCCATGC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLTGSVQ*PGFSPC
Trigger: GCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACGGGCTCGGTGCAGTaGCCTGGGTTCTCCCCATGC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTGSVQ*PGFSPC
Trigger: GCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGTAGCCACTGCGGGGTaGACATCCTCCACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAVATAG*TSSTAV
Trigger: GACAGCAGTGGAGGATGTCAACCCCGCAGTGGCTAC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGCGCTGCTTTCATCCTaGGCCATGAACTTCATGAGC +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTALLSS*AMNFMS
Trigger: GCTCATGAAGTTCATGGCCAAGGATGAAAGCAGCGC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTGCGATATACGCAGCTaGGGTCGGAGGCTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSCDIRS*GRRLLY
Trigger: ATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGGGGCCGTCATCGCCTaGGTTCATCGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAGAVIA*VHRLLF
Trigger: GAAGAGGAGACGATGAACCAAGGCGATGACGGCCCC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCCACCCCCGCCGCATaGCCGGGAACCATCATGCTT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKATPAA*PGTIML
Trigger: AAGCATGATGGTTCCCGGCAATGCGGCGGGGGTGGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCCACCCCCGCCGCATaGCCGGGAACCATCATGCTT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLATPAA*PGTIML
Trigger: AAGCATGATGGTTCCCGGCAATGCGGCGGGGGTGGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAGCGCAGGAACTGCTaGGCCACCCCCGCCGCATTG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPQRRNC*ATPAAL
Trigger: CAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS TCA 90 bp GGGCCAGTAGTGGAAAAGCATTTGCACAGCTGGAGGCTTCACTTGTaGAGGCCCATACGCAATCACATACAAAAGATCTTTCCAGACTTC +
Preference number: 5 (lower is better)
Translates to: GPVVEKHLHSWRLHL*RPIRNHIQKIFPDF
Trigger: GAAGTCTGGAAAGATCTTTTGTATGTGATTGCGTATGGGCCTTCACAAGTGAAGCCTCCAGCTGTGCAAATGCTTTTCCACTACTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp ATCTTCACAGCTGGTTTGTTAATTGCATTGTGGCATTCAATGTGCTaGCAGTGGATGGGATTCCAAGCTGTGTACTGCAACCCCCTGTAC +
Preference number: 5 (lower is better)
Translates to: IFTAGLLIALWHSMC*QWMGFQAVYCNPLY
Trigger: GTACAGGGGGTTGCAGTACACAGCTTGGAATCCCATCCACTGCCAGCACATTGAATGCCACAATGCAATTAACAAACCAGCTGTGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 90 bp CCATTTCTACCATCACTTTGTTATGGGCCATTAGCTGAAGGATGCTaGGTGTCACCCTACTCCAAAATTCTAGTGCTGTCAGTATCGCCG +
Preference number: 5 (lower is better)
Translates to: PFLPSLCYGPLAEGC*VSPYSKILVLSVSP
Trigger: CGGCGATACTGACAGCACTAGAATTTTGGAGTAGGGTGACACCCAGCATCCTTCAGCTAATGGCCCATAACAAAGTGATGGTAGAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CCA 90 bp TTACACTGGCGTTTCCCAGGCTGTATCTGTTTTGATATTGAGGAATaGCTACTTGTTTCCGGCACACCTGCATCTAACGTAGGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: LHWRFPGCICFDIEE*LLVSGTPASNVGAD
Trigger: ATCTGCCCCTACGTTAGATGCAGGTGTGCCGGAAACAAGTAGCCATTCCTCAATATCAAAACAGATACAGCCTGGGAAACGCCAGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAGTCACGTAGAGGCCTaGGTAGTCCAAAGAAGGGTA +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTSHVEA*VVQRRV
Trigger: TACCCTTCTTTGGACTACCAAGGCCTCTACGTGACT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGTAGTGGAAAAGCATTaGCACAGCTGGAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTVVEKH*HSWRLH
Trigger: GTGAAGCCTCCAGCTGTGCAAATGCTTTTCCACTAC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACCGCATTCCCGCGTGTaGATGGGCGGAGGAGAGGTC +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVPHSRV*MGGGEV
Trigger: GACCTCTCCTCCGCCCATCAACACGCGGGAATGCGG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCTGAGGTTAGCAACATaGGTCCTCACAGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTLRLAT*VLTAVM
Trigger: CATCACTGCTGTGAGGACCAATGTTGCTAACCTCAG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGGGAGCAGGTCCTaGATGGTGTTGTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSGSRS*MVLSFS
Trigger: TGAGAATGACAACACCATCAAGGACCTGCTCCCAGA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTCTGGGAGCAGGTCCTaGATGGTGTTGTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTSGSRS*MVLSFS
Trigger: TGAGAATGACAACACCATCAAGGACCTGCTCCCAGA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAGGGTCGTTTGGTCTTaGTGCGATATACGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSRVVWS*CDIRSL
Trigger: CAAGCTGCGTATATCGCACAAAGACCAAACGACCCT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAAGGAGGTCTCGTTTTaGCTTCAGCGTCAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREKEVSF*LQRQWA
Trigger: AGCCCACTGACGCTGAAGCAAAAACGAGACCTCCTT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTTGAGGAATGGCTACTaGTTTCCGGCACACCTGCAT +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTLRNGY*FPAHLH
Trigger: ATGCAGGTGTGCCGGAAACAAGTAGCCATTCCTCAA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGCCACCCCCGCCGCATaGCCGGGAACCATCATGCTT +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSATPAA*PGTIML
Trigger: AAGCATGATGGTTCCCGGCAATGCGGCGGGGGTGGC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGCCACCCCCGCCGCATaGCCGGGAACCATCATGCTT +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVATPAA*PGTIML
Trigger: AAGCATGATGGTTCCCGGCAATGCGGCGGGGGTGGC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGCAGCACGGAGGTCTTaGATTGCTCTGGAAATCCAA +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCAARRS*IALEIQ
Trigger: TTGGATTTCCAGAGCAATCAAAGACCTCCGTGCTGC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTGTAGCGACGGCACTTaGCTCGCAATAAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTCSDGT*LAINCP
Trigger: TGGACAGTTTATTGCGAGCAAAGTGCCGTCGCTACA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAACCTCATAGGAATTTaGGAGGTCAGGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTNLIGI*EVRVSG
Trigger: CCCTGAGACCCTGACCTCCAAAATTCCTATGAGGTT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTAACCTCATAGGAATTTaGGAGGTCAGGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSNLIGI*EVRVSG
Trigger: CCCTGAGACCCTGACCTCCAAAATTCCTATGAGGTT...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp GGGTCTTCCAGAGTGATGAGGGCAGAGTCAGTGTTCCCTGCTGACTaGTTATTTCCTGAGTCCTTAGAAGAAAAGTCTTTGGAACAATCC +
Preference number: 5 (lower is better)
Translates to: GSSRVMRAESVFPAD*LFPESLEEKSLEQS
Trigger: GGATTGTTCCAAAGACTTTTCTTCTAAGGACTCAGGAAATAATCAGTCAGCAGGGAACACTGACTCTGCCCTCATCACTCTGGAAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp TGGAGACACACCATTTCTACCATCACTTTGTTATGGGCCATTAGCTaGAGGATGCTGGGTGTCACCCTACTCCAAAATTCTAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: WRHTISTITLLWAIS*RMLGVTLLQNSSAV
Trigger: GACAGCACTAGAATTTTGGAGTAGGGTGACACCCAGCATCCTTCAGCTAATGGCCCATAACAAAGTGATGGTAGAAATGGTGTGTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CCA 90 bp AGGAATCGACTGCCTAATTCCTTTTGTGAACATCATTTGGATCATTaGGATGGGTGCGCCATTTTATCACATCGTCAGCTTGCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: RNRLPNSFCEHHLDH*DGCAILSHRQLALS
Trigger: GGACAGGGCAAGCTGACGATGTGATAAAATGGCGCACCCATCCCAATGATCCAAATGATGTTCACAAAAGGAATTAGGCAGTCGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCCCTGTACTCGCTTATaGCCCCAGGAGGTTTTAAAT +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSPCTRL*PQEVLN
Trigger: ATTTAAAACCTCCTGGGGCAATAAGCGAGTACAGGG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCAAACATCTCCTCCATaGAGAAAGGCAGAGGACAGA +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTQTSPP*RKAEDR
Trigger: TCTGTCCTCTGCCTTTCTCAATGGAGGAGATGTTTG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTAGCCACTGCGGGGTaGACATCCTCCACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLVATAG*TSSTAV
Trigger: GACAGCAGTGGAGGATGTCAACCCCGCAGTGGCTAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTAGCCACTGCGGGGTaGACATCCTCCACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVATAG*TSSTAV
Trigger: GACAGCAGTGGAGGATGTCAACCCCGCAGTGGCTAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGATGCAGCAGGATCTaGCTGATATCACAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCRERCSRI*LISQSR
Trigger: CCGAGACTGTGATATCAGCAAGATCCTGCTGCATCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGGGTCGTTTGGTCTTaGTGCGATATACGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCRERVVWS*CDIRSL
Trigger: CAAGCTGCGTATATCGCACAAAGACCAAACGACCCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGGGGCCGTCATCGCCTaGGTTCATCGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLGAVIA*VHRLLF
Trigger: GAAGAGGAGACGATGAACCAAGGCGATGACGGCCCC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCCTCCACACTTACTaGTACAAGCGGAGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREILHTY*YKRSCA
Trigger: AGCACAGCTCCGCTTGTACAAGTAAGTGTGGAGGAT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCAGCTCCTCTGGCTTaGAGGATCCTTCGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLAAPLA*RILRRP
Trigger: TGGACGCCGAAGGATCCTCAAAGCCAGAGGAGCTGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTATCTTTGATCGTGCTTaGGAACAGCTGCGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTIFDRA*EQLRED
Trigger: ATCTTCCCGCAGCTGTTCCAAAGCACGATCAAAGAT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTTCTGGTAAAGGAGATTaGAGCTTTAGGGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTSGKGD*SFRACR
Trigger: TCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAGA...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGTTGACTCAGCTAGTTaGGTTCCAGCATCTGCACAA +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCVDSAS*VPASAQ
Trigger: TTGTGCAGATGCTGGAACCAAACTAGCTGAGTCAAC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCGCTTGCTCAGGATTGTaGACTCAGCTAGTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCACSGL*TQLVWF
Trigger: GAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGC...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATTGTTATCTCTGTGGTaGCCCCGTGAGATGTCCATG +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCRELLSLW*PREMSM
Trigger: CATGGACATCTCACGGGGCAACCACAGAGATAACAA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATGTAGCGACGGCACTTaGCTCGCAATAAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCRECSDGT*LAINCP
Trigger: TGGACAGTTTATTGCGAGCAAAGTGCCGTCGCTACA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCATGGGCACTGTCAAATaGGAGGCATCTTGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCMGTVK*EASWFS
Trigger: GGAAAACCAAGATGCCTCCAATTTGACAGTGCCCAT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAACCAGTTGGAAAGGCTTaGCCCCAAAATCTGTGTCGT +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREPVGKA*PQNLCR
Trigger: ACGACACAGATTTTGGGGCAAAGCCTTTCCAACTGG...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp TTCTTCACAGAGATACAACGGGGGTGGTTTATCACCCAACGCTACTaGCAGGGAAGGGTCTATACACATCTTCACAGCTGGTTTGTTAAT +
Preference number: 5 (lower is better)
Translates to: FFTEIQRGWFITQRY*QGRVYTHLHSWFVN
Trigger: ATTAACAAACCAGCTGTGAAGATGTGTATAGACCCTTCCCTGTCAGTAGCGTTGGGTGATAAACCACCCCCGTTGTATCTCTGTGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 90 bp ACACCATTTCTACCATCACTTTGTTATGGGCCATTAGCTGAAGGATaGTGGGTGTCACCCTACTCCAAAATTCTAGTGCTGTCAGTATCG +
Preference number: 5 (lower is better)
Translates to: TPFLPSLCYGPLAEG*WVSPYSKILVLSVS
Trigger: CGATACTGACAGCACTAGAATTTTGGAGTAGGGTGACACCCAGCATCCTTCAGCTAATGGCCCATAACAAAGTGATGGTAGAAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CCA 90 bp TACTGCATTGCAATCATTAGCATGGATGATGCAGAGAGGTTAACATaGGCAGGTACACCTTCTCTCCTTGAGGAGCCCAATATAGCCATT +
Preference number: 5 (lower is better)
Translates to: YCIAIISMDDAERLT*AGTPSLLEEPNIAI
Trigger: AATGGCTATATTGGGCTCCTCAAGGAGAGAAGGTGTACCTGCCCATGTTAACCTCTCTGCATCATCCATGCTAATGATTGCAATGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGGTTCTCCCCATGCTaGCTTGCAGGATTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGFSPC*LAGFSS
Trigger: GGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACCC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGGGTTCTCCCCATGCTaGCTTGCAGGATTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLGFSPC*LAGFSS
Trigger: GGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACCC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGGAGAGCGCCCTCTaGGATTCCACAGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPRESAL*DSTGPF
Trigger: GAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTAGGTCCTTGATGGTGTaGTCATTCTCAGGAGATTGT +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTRSLMV*SFSGDC
Trigger: ACAATCTCCTGAGAATGACAACACCATCAAGGACCT...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATGCGATATACGCAGCTaGGGTCGGAGGCTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRACDIRS*GRRLLY
Trigger: ATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCATCGGGGATTTCACTATaGTCAGGCCTCGTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRASGISL*SGLVAE
Trigger: CTCTGCTACGAGGCCTGACAATAGTGAAATCCCCGA...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGGGCCGTCATCGCCTaGGTTCATCGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPGAVIA*VHRLLF
Trigger: GAAGAGGAGACGATGAACCAAGGCGATGACGGCCCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGCAGCTCCTCTGGCTTaGAGGATCCTTCGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSAAPLA*RILRRP
Trigger: TGGACGCCGAAGGATCCTCAAAGCCAGAGGAGCTGC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCAGCTCCTCTGGCTTaGAGGATCCTTCGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPAAPLA*RILRRP
Trigger: TGGACGCCGAAGGATCCTCAAAGCCAGAGGAGCTGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTTCTGTTCTCCCAGTTaGTCCAGAATGTTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCFCSPS*SRMLKE
Trigger: CTCCTTCAACATTCTGGACAAACTGGGAGAACAGAA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTTCTGTTCTCCCAGTTaGTCCAGAATGTTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSFCSPS*SRMLKE
Trigger: CTCCTTCAACATTCTGGACAAACTGGGAGAACAGAA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCACAGTCATGGCATTaGTCCGTCATCACCGTCGGC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLPQSWH*SVITVG
Trigger: GCCGACGGTGATGACGGACAAATGCCATGACTGTGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGTTGACTCAGCTAGTTaGGTTCCAGCATCTGCACAA +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREVDSAS*VPASAQ
Trigger: TTGTGCAGATGCTGGAACCAAACTAGCTGAGTCAAC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATCTGCTTGCTCAGGATaGTTGACTCAGCTAGTTTGG +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCRESACSG*LTQLVW
Trigger: CCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGGGCCAGCCCCACTTaGAGATGTCCCCCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKWASPT*RCPPKV
Trigger: TACCTTTGGGGGACATCTCAAAGTGGGGCTGGCCCA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCAAATTGGAGGCATCTaGGTTTTCCTTCTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSQIGGI*VFLLPC
Trigger: ACAGGGAAGAAGGAAAACCAAGATGCCTCCAATTTG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTCAAATTGGAGGCATCTaGGTTTTCCTTCTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTQIGGI*VFLLPC
Trigger: ACAGGGAAGAAGGAAAACCAAGATGCCTCCAATTTG...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGAGGAGGAATTTCATTaGGAATGCACAGTCCAACGC +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREEEEFH*ECTVQR
Trigger: GCGTTGGACTGTGCATTCCAAATGAAATTCCTCCTC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp AGGCATAACGTTATCTCAGAGTTACAAAGTCATGATTCATCACCTTaGAACTATCTGCTGTGCTCTCTTCTCCACCAGTGGGAGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RHNVISELQSHDSSP*NYLLCSLLHQWECA
Trigger: AGCACACTCCCACTGGTGGAGAAGAGAGCACAGCAGATAGTTTCAAGGTGATGAATCATGACTTTGTAACTCTGAGATAACGTTATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGAAAGATGCACTCATaGCATGCGACCACCCGAGGG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLRKMHS*HATTRG
Trigger: CCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGAAAGATGCACTCATaGCATGCGACCACCCGAGGG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRKMHS*HATTRG
Trigger: CCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGGTTTGTTAATTGCATaGTGGCATTCAATGTGCTGG +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSGLLIA*WHSMCW
Trigger: CCAGCACATTGAATGCCACAATGCAATTAACAAACC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAGCGTCTCAAATCTATaGACAAAGAACTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCRESVSNL*TKNSQL
Trigger: GAGCTGGGAGTTCTTTGTCAATAGATTTGAGACGCT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATGTCGCTTGACCGTGTaGAAGGCCTTTGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKCRLTV*KAFALL
Trigger: CAGCAGTGCAAAGGCCTTCAACACGGTCAAGCGACA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGAAATAATGCCGGAGTaGAGGACAAGAGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTEIMPE*RTRAVF
Trigger: AAATACTGCTCTTGTCCTCAACTCCGGCATTATTTC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCTGCTTATGTTACTGTaGTCACTGTACAAAGGTCCT +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCLLMLL*SLYKGP
Trigger: AGGACCTTTGTACAGTGACAACAGTAACATAAGCAG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGCCTATACTGAGTaGATATTGAGGAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSAYTE*ILRNGY
Trigger: GTAGCCATTCCTCAATATCAACTCAGTATAGGCAGA...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCACAGTCATGGCATTaGTCCGTCATCACCGTCGGC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPPQSWH*SVITVG
Trigger: GCCGACGGTGATGACGGACAAATGCCATGACTGTGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAAACTCCTTGTAGCATaGGTAGAAGGGATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCKLLVA*VEGIFK
Trigger: CTTGAAGATCCCTTCTACCAATGCTACAAGGAGTTT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGGGAGAGGAGGCATTaGGGCACACTGCATTGTGAG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLRERRH*GTLHCE
Trigger: CTCACAATGCAGTGTGCCCAAATGCCTCCTCTCCCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGGGAGAGGAGGCATTaGGGCACACTGCATTGTGAG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRERRH*GTLHCE
Trigger: CTCACAATGCAGTGTGCCCAAATGCCTCCTCTCCCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GCAAGCTGCCACTTTTCCCAGGATAAAGACAAAAAGCTTCAGTCAGGTGTCACTGAATTCATTCTGATTTaGGAGATTTGTAGCGACGGC +
Preference number: 5 (lower is better)
Translates to: ASCHFSQDKDKKLQSGVTEFILI*EICSDG
Trigger: GCCGTCGCTACAAATCTCCAAAATCAGAATGAATTC...AGTGACACCTGACTGAAGCTTTTTGTCTTTATCCTGGGAAAAGTGGCAGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS GCA 90 bp TTATCTCAGAGTTACAAAGTCATGATTCATCACCTTGAAACTATCTaGTGTGCTCTCTTCTCCACCAGTGGGAGTGTGCTCAGAGAACAA +
Preference number: 5 (lower is better)
Translates to: LSQSYKVMIHHLETI*CALFSTSGSVLREQ
Trigger: TTGTTCTCTGAGCACACTCCCACTGGTGGAGAAGAGAGCACAGCAGATAGTTTCAAGGTGATGAATCATGACTTTGTAACTCTGAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CCA 90 bp AGCTTGCTCAAAATTGTGGGTCTGTCTTTAACCACAGTATCAAACTaGAAGTCAAGACAAAGACATAGACCCTGCAATGCTGGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SLLKIVGLSLTTVSN*KSRQRHRPCNAGLF
Trigger: AAAGAGGCCAGCATTGCAGGGTCTATGTCTTTGTCTTGACTTCCAGTTTGATACTGTGGTTAAAGACAGACCCACAATTTTGAGCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCACCCTGTACTCGCTTATaGCCCCAGGAGGTTTTAAAT +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAPCTRL*PQEVLN
Trigger: ATTTAAAACCTCCTGGGGCAATAAGCGAGTACAGGG...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGGTTTGTTAATTGCATaGTGGCATTCAATGTGCTGG +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREGLLIA*WHSMCW
Trigger: CCAGCACATTGAATGCCACAATGCAATTAACAAACC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCATCTTCACAGCTGGTTaGTTAATTGCATTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCIFTAG*LIALWH
Trigger: ATGCCACAATGCAATTAACAAACCAGCTGTGAAGAT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTTGAGTGGCACCTCTaGCAGTACCGAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPFEWHL*QYRTGL
Trigger: CAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTTTGAGTGGCACCTCTaGCAGTACCGAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSFEWHL*QYRTGL
Trigger: CAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAAA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTGTTACCGGAAGCTGTaGGTAGCAAAATTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSCYRKL*VAKFSF
Trigger: GAAAGAAAATTTTGCTACCAACAGCTTCCGGTAACA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACGACCCTCCACAGGCTaGCAATCAACATGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPRPSTG*QSTCGP
Trigger: AGGACCACATGTTGATTGCAAGCCTGTGGAGGGTCG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACGACCCTCCACAGGCTaGCAATCAACATGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVRPSTG*QSTCGP
Trigger: AGGACCACATGTTGATTGCAAGCCTGTGGAGGGTCG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATGCAAGAGTAAAAGCTaGCTCAAAATTGTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCRECKSKS*LKIVGL
Trigger: CAGACCCACAATTTTGAGCAAGCTTTTACTCTTGCA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCGCTGCTTTCATCCTaGGCCATGAACTTCATGAGC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKALLSS*AMNFMS
Trigger: GCTCATGAAGTTCATGGCCAAGGATGAAAGCAGCGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCGCTGCTTTCATCCTaGGCCATGAACTTCATGAGC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLALLSS*AMNFMS
Trigger: GCTCATGAAGTTCATGGCCAAGGATGAAAGCAGCGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACGTACAGGTGTCGCTaGACCGTGTTGAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTYRCR*TVLKAF
Trigger: AAAGGCCTTCAACACGGTCAAGCGACACCTGTACGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACGTACAGGTGTCGCTaGACCGTGTTGAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLTYRCR*TVLKAF
Trigger: AAAGGCCTTCAACACGGTCAAGCGACACCTGTACGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTGTTATAGTCCATAACTaGGGCAATTCCTGCAATGAA +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSVIVHN*GNSCNE
Trigger: TTCATTGCAGGAATTGCCCAAGTTATGGACTATAAC...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGAAATAATGCCGGAGTaGAGGACAAGAGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREEIMPE*RTRAVF
Trigger: AAATACTGCTCTTGTCCTCAACTCCGGCATTATTTC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCAACGAGGCGGCTGTaGGAAATAATGCCGGAGTTG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPATRRL*EIMPEL
Trigger: CAACTCCGGCATTATTTCCAACAGCCGCCTCGTTGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGCGATATACGCAGCTaGGGTCGGAGGCTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLCDIRS*GRRLLY
Trigger: ATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCGGGGATTTCACTATaGTCAGGCCTCGTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLSGISL*SGLVAE
Trigger: CTCTGCTACGAGGCCTGACAATAGTGAAATCCCCGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAAGGAGGTCTCGTTTTaGCTTCAGCGTCAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKKEVSF*LQRQWA
Trigger: AGCCCACTGACGCTGAAGCAAAAACGAGACCTCCTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCATCTTCGGGAACTTaGAGGAGGACGGTTTTTGCC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKASSGT*RRTVFA
Trigger: GGCAAAAACCGTCCTCCTCAAAGTTCCCGAAGATGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCATCTTCGGGAACTTaGAGGAGGACGGTTTTTGCC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLASSGT*RRTVFA
Trigger: GGCAAAAACCGTCCTCCTCAAAGTTCCCGAAGATGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAAACTCCTTGTAGCATaGGTAGAAGGGATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREKLLVA*VEGIFK
Trigger: CTTGAAGATCCCTTCTACCAATGCTACAAGGAGTTT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCCAAGCAGAAGAAGGTTaGTATCTGGTAAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCQAEEG*YLVKEI
Trigger: AATCTCCTTTACCAGATACAAACCTTCTTCTGCTTG...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCAAGCAGAAGAAGGTTaGTATCTGGTAAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSQAEEG*YLVKEI
Trigger: AATCTCCTTTACCAGATACAAACCTTCTTCTGCTTG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGAGGCTATCATCTGCTaGCTCAGGATTGTTGACTCA +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAEAIIC*LRIVDS
Trigger: TGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAAATCCAGCACTTCGTaGATGTACTGCCTCACACAC +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAKSSTS*MYCLTH
Trigger: GTGTGTGAGGCAGTACATCAACGAAGTGCTGGATTT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAGAATTCATTCTGATTTaGGAGATTTGTAGCGACGGC +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREEFILI*EICSDG
Trigger: GCCGTCGCTACAAATCTCCAAAATCAGAATGAATTC...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTGTTCCCCAACCTGCTaGGATCAAATTGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSCSPTC*DQIVCF
Trigger: AAAACAAACAATTTGATCCAAGCAGGTTGGGGAACA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGCAAGTACCGGATCTaGGAAGCAAACTGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLCKYRI*EANCSA
Trigger: AGCGGAGCAGTTTGCTTCCAAGATCCGGTACTTGCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGCTCCGCCAGCGATGTaGCGAGGAAAAGAGTGCATA +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSAPPAM*RGKECI
Trigger: TATGCACTCTTTTCCTCGCAACATCGCTGGCGGAGC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCAGTATTTCAAGGTGTTaGCAATATCTGTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: SFGMHSPTLGIGAEKSWCSISRC*QYLFLM
Trigger: CATCAGGAACAGATATTGCAAACACCTTGAAATACT...GCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGTCACGTAGAGGCCTaGGTAGTCCAAAGAAGGGTA +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLSHVEA*VVQRRV
Trigger: TACCCTTCTTTGGACTACCAAGGCCTCTACGTGACT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTTATTCAATGATATCCTaGTGCAGAAATGGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSYSMIS*CRNGGK
Trigger: CTTTCCTCCATTTCTGCACAAGGATATCATTGAATA...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTAGTGGAAAAGCATTaGCACAGCTGGAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLVVEKH*HSWRLH
Trigger: GTGAAGCCTCCAGCTGTGCAAATGCTTTTCCACTAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTGAGGTTAGCAACATaGGTCCTCACAGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLLRLAT*VLTAVM
Trigger: CATCACTGCTGTGAGGACCAATGTTGCTAACCTCAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCAAAGCGAGCTCTCTaGATCTTCCATAAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAKRAL*IFHKAA
Trigger: TGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCAAAGCGAGCTCTCTaGATCTTCCATAAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLAKRAL*IFHKAA
Trigger: TGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGATTGTTGTCGAATTTaGGAGGTCAGGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKDCCRI*EVRVSG
Trigger: CCCTGAGACCCTGACCTCCAAAATTCGACAACAATC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGATTGTTGTCGAATTTaGGAGGTCAGGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLDCCRI*EVRVSG
Trigger: CCCTGAGACCCTGACCTCCAAAATTCGACAACAATC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCTGGGAGCAGGTCCTaGATGGTGTTGTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLSGSRS*MVLSFS
Trigger: TGAGAATGACAACACCATCAAGGACCTGCTCCCAGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGATGCAGCAGGATCTaGCTGATATCACAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKRCSRI*LISQSR
Trigger: CCGAGACTGTGATATCAGCAAGATCCTGCTGCATCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGCGATATACGCAGCTaGGGTCGGAGGCTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPCDIRS*GRRLLY
Trigger: ATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAACGTCCAGGGTCGTTaGGTCTTTGTGCGATATACG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKNVQGR*VFVRYT
Trigger: CGTATATCGCACAAAGACCAAACGACCCTGGACGTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCGGGGATTTCACTATaGTCAGGCCTCGTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPSGISL*SGLVAE
Trigger: CTCTGCTACGAGGCCTGACAATAGTGAAATCCCCGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATCGGGGATTTCACTATaGTCAGGCCTCGTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSGISL*SGLVAE
Trigger: CTCTGCTACGAGGCCTGACAATAGTGAAATCCCCGA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATCCTCCACACTTACTaGTACAAGCGGAGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLILHTY*YKRSCA
Trigger: AGCACAGCTCCGCTTGTACAAGTAAGTGTGGAGGAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATCCTCCACACTTACTaGTACAAGCGGAGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKILHTY*YKRSCA
Trigger: AGCACAGCTCCGCTTGTACAAGTAAGTGTGGAGGAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAAGGAGGTCTCGTTTTaGCTTCAGCGTCAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVKEVSF*LQRQWA
Trigger: AGCCCACTGACGCTGAAGCAAAAACGAGACCTCCTT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAAGGAGGTCTCGTTTTaGCTTCAGCGTCAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPKEVSF*LQRQWA
Trigger: AGCCCACTGACGCTGAAGCAAAAACGAGACCTCCTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCATCTTCGGGAACTTaGAGGAGGACGGTTTTTGCC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPASSGT*RRTVFA
Trigger: GGCAAAAACCGTCCTCCTCAAAGTTCCCGAAGATGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTGAGGAATGGCTACTaGTTTCCGGCACACCTGCAT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLLRNGY*FPAHLH
Trigger: ATGCAGGTGTGCCGGAAACAAGTAGCCATTCCTCAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTGAGGAATGGCTACTaGTTTCCGGCACACCTGCAT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLRNGY*FPAHLH
Trigger: ATGCAGGTGTGCCGGAAACAAGTAGCCATTCCTCAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAATCTTGGTGCTCTCATCATGCTTTCTGCTaGATTAGAAAAGGTAGTACT +
Preference number: 5 (lower is better)
Translates to: FGMHSPTLGIGAEKSWCSHHAFC*IRKGST
Trigger: AGTACTACCTTTTCTAATCAAGCAGAAAGCATGATG...AGAGCACCAAGATTTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATGGAGCTCAGCTCATaGAAGTCCATCAGAGACGAG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKMELSS*KSIRDE
Trigger: CTCGTCTCTGATGGACTTCAATGAGCTGAGCTCCAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTGTTATCTCTGTGGTaGCCCCGTGAGATGTCCATG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKLLSLW*PREMSM
Trigger: CATGGACATCTCACGGGGCAACCACAGAGATAACAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCAGCACGGAGGTCTTaGATTGCTCTGGAAATCCAA +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAARRS*IALEIQ
Trigger: TTGGATTTCCAGAGCAATCAAAGACCTCCGTGCTGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCAGCACGGAGGTCTTaGATTGCTCTGGAAATCCAA +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLAARRS*IALEIQ
Trigger: TTGGATTTCCAGAGCAATCAAAGACCTCCGTGCTGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGTAGCGACGGCACTTaGCTCGCAATAAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLCSDGT*LAINCP
Trigger: TGGACAGTTTATTGCGAGCAAAGTGCCGTCGCTACA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTGCAAGTACCGGATCTaGGAAGCAAACTGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSCKYRI*EANCSA
Trigger: AGCGGAGCAGTTTGCTTCCAAGATCCGGTACTTGCA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACGAGTAACAGTAGGGTaGATGGAACTGACCTGCGGT +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVRVTVG*MELTCG
Trigger: ACCGCAGGTCAGTTCCATCAACCCTACTGTTACTCG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACCAGTTGGAAAGGCTTaGCCCCAAAATCTGTGTCGT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKPVGKA*PQNLCR
Trigger: ACGACACAGATTTTGGGGCAAAGCCTTTCCAACTGG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAATTCTCAGGAGATTGTaGTCCTGGCGTCTGTTCGGG +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVILRRL*SWRLFG
Trigger: CCCGAACAGACGCCAGGACAACAATCTCCTGAGAAT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTATTCTCAGGAGATTGTaGTCCTGGCGTCTGTTCGGG +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSILRRL*SWRLFG
Trigger: CCCGAACAGACGCCAGGACAACAATCTCCTGAGAAT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTCATTCTCAGGAGATaGTTGTCCTGGCGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVILRR*LSWRLF
Trigger: GAACAGACGCCAGGACAACAATCTCCTGAGAATGAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp CGAGATGCAAGGTTCCCTGCCAGTTCACTGACTCTTGATTTTCTTTaGTTTGCCAGCTCTTTGACTGAATTAACTCCATCAGAAAACATA +
Preference number: 5 (lower is better)
Translates to: RDARFPASSLTLDFL*FASSLTELTPSENI
Trigger: TATGTTTTCTGATGGAGTTAATTCAGTCAAAGAGCTGGCAAATCAAAGAAAATCAAGAGTCAGTGAACTGGCAGGGAACCTTGCATCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTTTCCGCGGAAGAGTaGTTCTCGAGAAAGATGCAC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPLSAEE*FSRKMH
Trigger: GTGCATCTTTCTCGAGAACAACTCTTCCGCGGAAAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAGTCACGTAGAGGCCTaGGTAGTCCAAAGAAGGGTA +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSHVEA*VVQRRV
Trigger: TACCCTTCTTTGGACTACCAAGGCCTCTACGTGACT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGTCACGTAGAGGCCTaGGTAGTCCAAAGAAGGGTA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPSHVEA*VVQRRV
Trigger: TACCCTTCTTTGGACTACCAAGGCCTCTACGTGACT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAATATTCAATGATATCCTaGTGCAGAAATGGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREYSMIS*CRNGGK
Trigger: CTTTCCTCCATTTCTGCACAAGGATATCATTGAATA...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTAGTGGAAAAGCATTaGCACAGCTGGAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPVVEKH*HSWRLH
Trigger: GTGAAGCCTCCAGCTGTGCAAATGCTTTTCCACTAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGTAGTGGAAAAGCATTaGCACAGCTGGAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSVVEKH*HSWRLH
Trigger: GTGAAGCCTCCAGCTGTGCAAATGCTTTTCCACTAC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCCCTGTACTCGCTTATaGCCCCAGGAGGTTTTAAAT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLPCTRL*PQEVLN
Trigger: ATTTAAAACCTCCTGGGGCAATAAGCGAGTACAGGG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAAACATCTCCTCCATaGAGAAAGGCAGAGGACAGA +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLQTSPP*RKAEDR
Trigger: TCTGTCCTCTGCCTTTCTCAATGGAGGAGATGTTTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGGTGTCCAAAATTCTaGAAAGGGCTACGAAACGGA +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGCPKF*KGLRNG
Trigger: TCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACCC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTGAGGTTAGCAACATaGGTCCTCACAGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPLRLAT*VLTAVM
Trigger: CATCACTGCTGTGAGGACCAATGTTGCTAACCTCAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCAAAGCGAGCTCTCTaGATCTTCCATAAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPAKRAL*IFHKAA
Trigger: TGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGCAAAGCGAGCTCTCTaGATCTTCCATAAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVAKRAL*IFHKAA
Trigger: TGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTGC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGATGCAGCAGGATCTaGCTGATATCACAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPRCSRI*LISQSR
Trigger: CCGAGACTGTGATATCAGCAAGATCCTGCTGCATCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAGATGCAGCAGGATCTaGCTGATATCACAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSRCSRI*LISQSR
Trigger: CCGAGACTGTGATATCAGCAAGATCCTGCTGCATCT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGGTCGTTTGGTCTTaGTGCGATATACGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPRVVWS*CDIRSL
Trigger: CAAGCTGCGTATATCGCACAAAGACCAAACGACCCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAACGTCCAGGGTCGTTaGGTCTTTGTGCGATATACG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPNVQGR*VFVRYT
Trigger: CGTATATCGCACAAAGACCAAACGACCCTGGACGTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAACGTCCAGGGTCGTTaGGTCTTTGTGCGATATACG +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSNVQGR*VFVRYT
Trigger: CGTATATCGCACAAAGACCAAACGACCCTGGACGTT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAATTTCAGGCCCCGAGGTaGAATCTGAGGATAGATCTA +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKFQAPR*NLRIDL
Trigger: TAGATCTATCCTCAGATTCAACCTCGGGGCCTGAAA...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTGAGGAATGGCTACTaGTTTCCGGCACACCTGCAT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPLRNGY*FPAHLH
Trigger: ATGCAGGTGTGCCGGAAACAAGTAGCCATTCCTCAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCATTAACTGGCTCATaGTCAGAACTCCCAGGGATC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLSLTGS*SELPGI
Trigger: GATCCCTGGGAGTTCTGACAATGAGCCAGTTAATGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATCTTTGATCGTGCTTaGGAACAGCTGCGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLIFDRA*EQLRED
Trigger: ATCTTCCCGCAGCTGTTCCAAAGCACGATCAAAGAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATCTTTGATCGTGCTTaGGAACAGCTGCGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKIFDRA*EQLRED
Trigger: ATCTTCCCGCAGCTGTTCCAAAGCACGATCAAAGAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTATGGAGCTCAGCTCATaGAAGTCCATCAGAGACGAG +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSMELSS*KSIRDE
Trigger: CTCGTCTCTGATGGACTTCAATGAGCTGAGCTCCAT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTCTGGTAAAGGAGATTaGAGCTTTAGGGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLSGKGD*SFRACR
Trigger: TCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAGA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTTGACTCAGCTAGTTaGGTTCCAGCATCTGCACAA +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVDSAS*VPASAQ
Trigger: TTGTGCAGATGCTGGAACCAAACTAGCTGAGTCAAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGCTTGCTCAGGATTGTaGACTCAGCTAGTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLACSGL*TQLVWF
Trigger: GAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGAGGCTATCATCTGCTaGCTCAGGATTGTTGACTCA +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKEAIIC*LRIVDS
Trigger: TGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAAATCCAGCACTTCGTaGATGTACTGCCTCACACAC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKKSSTS*MYCLTH
Trigger: GTGTGTGAGGCAGTACATCAACGAAGTGCTGGATTT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATTGTTATCTCTGTGGTaGCCCCGTGAGATGTCCATG +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVLLSLW*PREMSM
Trigger: CATGGACATCTCACGGGGCAACCACAGAGATAACAA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATGGGCACTGTCAAATaGGAGGCATCTTGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLMGTVK*EASWFS
Trigger: GGAAAACCAAGATGCCTCCAATTTGACAGTGCCCAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTCATTCTCAGGAGATaGTTGTCCTGGCGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPVILRR*LSWRLF
Trigger: GAACAGACGCCAGGACAACAATCTCCTGAGAATGAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp AGGAGGAATTTCATTTGGAATGCACAGTCCAACGCTAGGTATAGGTGCAGAGAAAAACAACGAAAACAATaGGCACAGTTTAACCACCTA +
Preference number: 5 (lower is better)
Translates to: RRNFIWNAQSNARYRCREKQRKQ*AQFNHL
Trigger: TAGGTGGTTAAACTGTGCCAATTGTTTTCGTTGTTT...TTCTCTGCACCTATACCTAGCGTTGGACTGTGCATTCCAAATGAAATTCCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 90 bp TTCAATGATATCCTTGTGCAGAAATGGAGGAAAGGTAGCCAACGTTaGTATCATCGTGTAGGGCAAAGTACTCAGAATATCATCATTGAG +
Preference number: 5 (lower is better)
Translates to: FNDILVQKWRKGSQR*YHRVGQSTQNIIIE
Trigger: CTCAATGATGATATTCTGAGTACTTTGCCCTACACGATGATATCAACGTTGGCTACCTTTCCTCCATTTCTGCACAAGGATATCATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp TCAATGTCAAACATTTTGCTTAATACTTCCCTGAATTCTTTTAACTaGTTATCTGGGACTTCTGTTCTGATGGCTTCCAGCCATTCCGGC +
Preference number: 5 (lower is better)
Translates to: SMSNILLNTSLNSFN*LSGTSVLMASSHSG
Trigger: GCCGGAATGGCTGGAAGCCATCAGAACAGAAGTCCCAGATAATCAGTTAAAAGAATTCAGGGAAGTATTAAGCAAAATGTTTGACATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 90 bp GCTCACAAAATCGCAAGTACCATAGTTAGGAATCAAACCCGGATCTaGGTAGAAATATTAGGAATCGACTGCCTAATTCCTTTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: AHKIASTIVRNQTRI*VEILGIDCLIPFVN
Trigger: GTTCACAAAAGGAATTAGGCAGTCGATTCCTAATATTTCTACTCAGATCCGGGTTTGATTCCTAACTATGGTACTTGCGATTTTGTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 90 bp TCAAATCTATTGACAAAGAACTCCCAGCTCAGAGCAGGAATATCCTaGTTAAGAAAGTGCAAGAGTAAAAGCTTGCTCAAAATTGTGGGT +
Preference number: 5 (lower is better)
Translates to: SNLLTKNSQLRAGIS*LRKCKSKSLLKIVG
Trigger: ACCCACAATTTTGAGCAAGCTTTTACTCTTGCACTTTCTTAAGCAGGATATTCCTGCTCTGAGCTGGGAGTTCTTTGTCAATAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACCCTGTACTCGCTTATaGCCCCAGGAGGTTTTAAAT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPPCTRL*PQEVLN
Trigger: ATTTAAAACCTCCTGGGGCAATAAGCGAGTACAGGG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAAGCAGATATTTCAGCTaGTGGCAGAAGAACATCAAT +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRASRYFS*WQKNIN
Trigger: ATTGATGTTCTTCTGCCACAAGCTGAAATATCTGCT...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACATTACTGTGATGATTaGAGTGGCACCTCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKHYCDD*SGTSCS
Trigger: ACTGCAAGAGGTGCCACTCAAATCATCACAGTAATG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACAAACATCTCCTCCATaGAGAAAGGCAGAGGACAGA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPQTSPP*RKAEDR
Trigger: TCTGTCCTCTGCCTTTCTCAATGGAGGAGATGTTTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCAAACATCTCCTCCATaGAGAAAGGCAGAGGACAGA +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSQTSPP*RKAEDR
Trigger: TCTGTCCTCTGCCTTTCTCAATGGAGGAGATGTTTG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGGGTGTCCAAAATTCTaGAAAGGGCTACGAAACGGA +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSGCPKF*KGLRNG
Trigger: TCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACCC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGGGTGTCCAAAATTCTaGAAAGGGCTACGAAACGGA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPGCPKF*KGLRNG
Trigger: TCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACCC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAGGGTGTCCAAAATTCTaGAAAGGGCTACGAAACGGA +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVGCPKF*KGLRNG
Trigger: TCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACCC...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAATAAGTTGCACTCGATaGCTTTTTCGTCCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKISCTR*LFRPSG
Trigger: GCCAGAAGGACGAAAAAGCAATCGAGTGCAACTTAT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGATAAGTTGCACTCGATaGCTTTTTCGTCCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLISCTR*LFRPSG
Trigger: GCCAGAAGGACGAAAAAGCAATCGAGTGCAACTTAT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGGTCCTTGATGGTGTaGTCATTCTCAGGAGATTGT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLRSLMV*SFSGDC
Trigger: ACAATCTCCTGAGAATGACAACACCATCAAGGACCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATTTCAGGCCCCGAGGTaGAATCTGAGGATAGATCTA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPFQAPR*NLRIDL
Trigger: TAGATCTATCCTCAGATTCAACCTCGGGGCCTGAAA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATTTCAGGCCCCGAGGTaGAATCTGAGGATAGATCTA +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVFQAPR*NLRIDL
Trigger: TAGATCTATCCTCAGATTCAACCTCGGGGCCTGAAA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGTTTGTCCAGAATGTaGAAGGAGATGTCGAGGTAC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLSLSRM*KEMSRY
Trigger: GTACCTCGACATCTCCTTCAACATTCTGGACAAACT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTTCTGTTCTCCCAGTTaGTCCAGAATGTTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLFCSPS*SRMLKE
Trigger: CTCCTTCAACATTCTGGACAAACTGGGAGAACAGAA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTTCATTAACTGGCTCATaGTCAGAACTCCCAGGGATC +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSLTGS*SELPGI
Trigger: GATCCCTGGGAGTTCTGACAATGAGCCAGTTAATGA...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCATTAACTGGCTCATaGTCAGAACTCCCAGGGATC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPSLTGS*SELPGI
Trigger: GATCCCTGGGAGTTCTGACAATGAGCCAGTTAATGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATCTTTGATCGTGCTTaGGAACAGCTGCGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPIFDRA*EQLRED
Trigger: ATCTTCCCGCAGCTGTTCCAAAGCACGATCAAAGAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCTGGTAAAGGAGATTaGAGCTTTAGGGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPSGKGD*SFRACR
Trigger: TCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGCTTGCTCAGGATTGTaGACTCAGCTAGTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSACSGL*TQLVWF
Trigger: GAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCTTGCTCAGGATTGTaGACTCAGCTAGTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPACSGL*TQLVWF
Trigger: GAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCTGCTTGCTCAGGATaGTTGACTCAGCTAGTTTGG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPSACSG*LTQLVW
Trigger: CCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTATCTGCTTGCTCAGGATaGTTGACTCAGCTAGTTTGG +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSACSG*LTQLVW
Trigger: CCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGA...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGAGGCTATCATCTGCTaGCTCAGGATTGTTGACTCA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPEAIIC*LRIVDS
Trigger: TGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAAATCCAGCACTTCGTaGATGTACTGCCTCACACAC +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVKSSTS*MYCLTH
Trigger: GTGTGTGAGGCAGTACATCAACGAAGTGCTGGATTT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAACAAAAATGGTCGAATaGCATTCCTGCAATGCCTCC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKTKMVE*HSCNAS
Trigger: GGAGGCATTGCAGGAATGCAATTCGACCATTTTTGT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGACAAAAATGGTCGAATaGCATTCCTGCAATGCCTCC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLTKMVE*HSCNAS
Trigger: GGAGGCATTGCAGGAATGCAATTCGACCATTTTTGT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS TCA 90 bp AATTGCGATGCATACGGTCTTAATCTTGCAGAAATCACTTACCTTTaGTTGCTCTGGAAATCCAATCAGGATAACAATAAGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: NCDAYGLNLAEITYL*LLWKSNQDNNKMVC
Trigger: GCAGACCATCTTATTGTTATCCTGATTGGATTTCCAGAGCAATCAAAGGTAAGTGATTTCTGCAAGATTAAGACCGTATGCATCGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGGTTTGTTAATTGCATaGTGGCATTCAATGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKGLLIA*WHSMCW
Trigger: CCAGCACATTGAATGCCACAATGCAATTAACAAACC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACATTACTGTGATGATTaGAGTGGCACCTCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVHYCDD*SGTSCS
Trigger: ACTGCAAGAGGTGCCACTCAAATCATCACAGTAATG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAATAAGTTGCACTCGATaGCTTTTTCGTCCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVISCTR*LFRPSG
Trigger: GCCAGAAGGACGAAAAAGCAATCGAGTGCAACTTAT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGCAAGAGTAAAAGCTaGCTCAAAATTGTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLCKSKS*LKIVGL
Trigger: CAGACCCACAATTTTGAGCAAGCTTTTACTCTTGCA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGCGTCTCAAATCTATaGACAAAGAACTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPSVSNL*TKNSQL
Trigger: GAGCTGGGAGTTCTTTGTCAATAGATTTGAGACGCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAGCGTCTCAAATCTATaGACAAAGAACTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSVSNL*TKNSQL
Trigger: GAGCTGGGAGTTCTTTGTCAATAGATTTGAGACGCT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGTCATTCTCAGGAGATaGTTGTCGAATTTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLVILRR*LSNFGG
Trigger: ACCTCCAAAATTCGACAACAATCTCCTGAGAATGAC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGGTCCTTGATGGTGTaGTCATTCTCAGGAGATTGT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPRSLMV*SFSGDC
Trigger: ACAATCTCCTGAGAATGACAACACCATCAAGGACCT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGGAAATAATGCCGGAGTaGAGGACAAGAGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLEIMPE*RTRAVF
Trigger: AAATACTGCTCTTGTCCTCAACTCCGGCATTATTTC...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTGCTTATGTTACTGTaGTCACTGTACAAAGGTCCT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLLLMLL*SLYKGP
Trigger: AGGACCTTTGTACAGTGACAACAGTAACATAAGCAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTAGTTTGTCCAGAATGTaGAAGGAGATGTCGAGGTAC +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSSLSRM*KEMSRY
Trigger: GTACCTCGACATCTCCTTCAACATTCTGGACAAACT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAGTTTGTCCAGAATGTaGAAGGAGATGTCGAGGTAC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPSLSRM*KEMSRY
Trigger: GTACCTCGACATCTCCTTCAACATTCTGGACAAACT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAAGTTTGTCCAGAATGTaGAAGGAGATGTCGAGGTAC +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVSLSRM*KEMSRY
Trigger: GTACCTCGACATCTCCTTCAACATTCTGGACAAACT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GCTCTTACACTATTAAAATTCCGTTTTATGAAACATCACTCCAGGTGCAGGGCAGCTGGTAAATTCTTTTaGTTATTTAGACCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: ALTLLKFRFMKHHSRCRAAGKFF*LFRPSR
Trigger: CCTAGAGGGTCTAAATAACAAAAAGAATTTACCAGC...TGCCCTGCACCTGGAGTGATGTTTCATAAAACGGAATTTTAATAGTGTAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAAACTCCTTGTAGCATaGGTAGAAGGGATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLKLLVA*VEGIFK
Trigger: CTTGAAGATCCCTTCTACCAATGCTACAAGGAGTTT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGAATTCATTCTGATTTaGGAGATTTGTAGCGACGGC +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKEFILI*EICSDG
Trigger: GCCGTCGCTACAAATCTCCAAAATCAGAATGAATTC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACAAAAATGGTCGAATaGCATTCCTGCAATGCCTCC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPTKMVE*HSCNAS
Trigger: GGAGGCATTGCAGGAATGCAATTCGACCATTTTTGT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTAACAAAAATGGTCGAATaGCATTCCTGCAATGCCTCC +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVTKMVE*HSCNAS
Trigger: GGAGGCATTGCAGGAATGCAATTCGACCATTTTTGT...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGCAGATATTTCAGCTaGTGGCAGAAGAACATCAAT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSRYFS*WQKNIN
Trigger: ATTGATGTTCTTCTGCCACAAGCTGAAATATCTGCT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGAGCAGATATTTCAGCTaGTGGCAGAAGAACATCAAT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLSRYFS*WQKNIN
Trigger: ATTGATGTTCTTCTGCCACAAGCTGAAATATCTGCT...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGTTACCGGAAGCTGTaGGTAGCAAAATTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLCYRKL*VAKFSF
Trigger: GAAAGAAAATTTTGCTACCAACAGCTTCCGGTAACA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCTCATCTTCCAGTCTTaGCTGTTGAAATTGCCATTT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLLIFQS*LLKLPF
Trigger: AAATGGCAATTTCAACAGCAAAGACTGGAAGATGAG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGCAAGAGTAAAAGCTaGCTCAAAATTGTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPCKSKS*LKIVGL
Trigger: CAGACCCACAATTTTGAGCAAGCTTTTACTCTTGCA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGTTATAGTCCATAACTaGGGCAATTCCTGCAATGAA +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKVIVHN*GNSCNE
Trigger: TTCATTGCAGGAATTGCCCAAGTTATGGACTATAAC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGAAATAATGCCGGAGTaGAGGACAAGAGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPEIMPE*RTRAVF
Trigger: AAATACTGCTCTTGTCCTCAACTCCGGCATTATTTC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATCTGCCTATACTGAGTaGATATTGAGGAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPSAYTE*ILRNGY
Trigger: GTAGCCATTCCTCAATATCAACTCAGTATAGGCAGA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAAAACTCCTTGTAGCATaGGTAGAAGGGATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPKLLVA*VEGIFK
Trigger: CTTGAAGATCCCTTCTACCAATGCTACAAGGAGTTT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCAAGCAGAAGAAGGTTaGTATCTGGTAAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLQAEEG*YLVKEI
Trigger: AATCTCCTTTACCAGATACAAACCTTCTTCTGCTTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACACATAGGTATCAGCTaGACAAAAATGGTCGAATTG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKHIGIS*TKMVEL
Trigger: CAATTCGACCATTTTTGTCAAGCTGATACCTATGTG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCACATAGGTATCAGCTaGACAAAAATGGTCGAATTG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLHIGIS*TKMVEL
Trigger: CAATTCGACCATTTTTGTCAAGCTGATACCTATGTG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTGTTCCCCAACCTGCTaGGATCAAATTGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLCSPTC*DQIVCF
Trigger: AAAACAAACAATTTGATCCAAGCAGGTTGGGGAACA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAAGTATTTCAAGGTGTTaGCAATATCTGTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKSISRC*QYLFLM
Trigger: CATCAGGAACAGATATTGCAAACACCTTGAAATACT...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGTATTCAATGATATCCTaGTGCAGAAATGGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLYSMIS*CRNGGK
Trigger: CTTTCCTCCATTTCTGCACAAGGATATCATTGAATA...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAATCTTCACAGCTGGTTaGTTAATTGCATTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPIFTAG*LIALWH
Trigger: ATGCCACAATGCAATTAACAAACCAGCTGTGAAGAT...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTATCTTCACAGCTGGTTaGTTAATTGCATTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSIFTAG*LIALWH
Trigger: ATGCCACAATGCAATTAACAAACCAGCTGTGAAGAT...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGTTACCGGAAGCTGTaGGTAGCAAAATTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPCYRKL*VAKFSF
Trigger: GAAAGAAAATTTTGCTACCAACAGCTTCCGGTAACA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTCATCTGGTCCAGTGTGCAAGCTACAGTTTTCAATTAAATTGTATACAAGTACTCATCTTCCAGTCTTaGCTGTTGAAATTGCCATTT +
Preference number: 5 (lower is better)
Translates to: THLVQCASYSFQLNCIQVLIFQS*LLKLPF
Trigger: AAATGGCAATTTCAACAGCAAAGACTGGAAGATGAG...TACTTGTATACAATTTAATTGAAAACTGTAGCTTGCACACTGGACCAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACTCATCTTCCAGTCTTaGCTGTTGAAATTGCCATTT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPLIFQS*LLKLPF
Trigger: AAATGGCAATTTCAACAGCAAAGACTGGAAGATGAG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGTTATAGTCCATAACTaGGGCAATTCCTGCAATGAA +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPVIVHN*GNSCNE
Trigger: TTCATTGCAGGAATTGCCCAAGTTATGGACTATAAC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTGTTATAGTCCATAACTaGGGCAATTCCTGCAATGAA +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSVIVHN*GNSCNE
Trigger: TTCATTGCAGGAATTGCCCAAGTTATGGACTATAAC...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAACATCATGCTTTCTGCTaGATTAGAAAAGGTAGTACT +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKHHAFC*IRKGST
Trigger: AGTACTACCTTTTCTAATCAAGCAGAAAGCATGATG...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAACCTGCTTGCATCATGCTTTCTGCTaGATTAGAAAAGGTAGTACT +
Preference number: 5 (lower is better)
Translates to: FTKLERECTVPICSPTCLHHAFC*IRKGST
Trigger: AGTACTACCTTTTCTAATCAAGCAGAAAGCATGATG...CAAGCAGGTTGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp GAAACACTTAATCAGATAGCCCAAGGAGTCATCAGAAATATGTGTAGCAAGAAAGCTGGTAAATTCTTTTaGTTATTTAGACCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: ETLNQIAQGVIRNMCSKKAGKFF*LFRPSR
Trigger: CCTAGAGGGTCTAAATAACAAAAAGAATTTACCAGC...TTTCTTGCTACACATATTTCTGATGACTCCTTGGGCTATCTGATTAAGTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp ACTAAAGTGGTTATCATAAAGCTTACAAGAGAGTACAGCCTAGAACTAATGAGTCACATAGGTATCAGCTaGACAAAAATGGTCGAATTG +
Preference number: 5 (lower is better)
Translates to: TKVVIIKLTREYSLELMSHIGIS*TKMVEL
Trigger: CAATTCGACCATTTTTGTCAAGCTGATACCTATGTG...ACTCATTAGTTCTAGGCTGTACTCTCTTGTAAGCTTTATGATAACCACTTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCACACATAGGTATCAGCTaGACAAAAATGGTCGAATTG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPHIGIS*TKMVEL
Trigger: CAATTCGACCATTTTTGTCAAGCTGATACCTATGTG...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATGTTCCCCAACCTGCTaGGATCAAATTGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPCSPTC*DQIVCF
Trigger: AAAACAAACAATTTGATCCAAGCAGGTTGGGGAACA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCATATTCAATGATATCCTaGTGCAGAAATGGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPYSMIS*CRNGGK
Trigger: CTTTCCTCCATTTCTGCACAAGGATATCATTGAATA...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS-3UTR CAA 90 bp TGCACATCTTTTACTAAACTAGAAAGAGAATGTACAGTACCAATATGTTCCCCAGCTGGTAAATTCTTTTaGTTATTTAGACCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: CTSFTKLERECTVPICSPAGKFF*LFRPSR
Trigger: CCTAGAGGGTCTAAATAACAAAAAGAATTTACCAGC...TGGGGAACATATTGGTACTGTACATTCTCTTTCTAGTTTAGTAAAAGATGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000627695.2
ENST00000629588.2
CDS TCA 72 bp GGCTTCCTGTCCGTCCCCTCCTGGAGCTGCCCGCGTTaGTGTGGGCGGGGAGACCGAAAGGAGAGAGCAGGC +
Preference number: 6 (lower is better)
Translates to: GFLSVPSWSCPR*CGRGDRKERAG
Trigger: GCCTGCTCTCTCCTTTCGGTCTCCCCGCCCACATCAACGCGGGCAGCTCCAGGAGGGGACGGACAGGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS GCA 72 bp ACTGCAACCACTTTCGGAGGGCTGCCAGGCCAGCACTaGTCTGGCCCGAGCCCGGCAGCGTCCTTAGGCTGT +
Preference number: 6 (lower is better)
Translates to: TATTFGGLPGQH*SGPSPAASLGC
Trigger: ACAGCCTAAGGACGCTGCCGGGCTCGGGCCAGAGCAGTGCTGGCCTGGCAGCCCTCCGAAAGTGGTTGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS GCA 72 bp CGGAGCCTCAGCAGGGTGACCAGAGAGGGACCCAGGTaGGTCCCACGCTTCGTCTCAACCTCGGGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: RSLSRVTREGPR*VPRFVSTSGRK
Trigger: CTTCCTCCCCGAGGTTGAGACGAAGCGTGGGACGCACCTGGGTCCCTCTCTGGTCACCCTGCTGAGGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS CAA 72 bp AGGCTTCCTGTCCGTCCCCTCCTGGAGCTGCCCGCGTaGATGTGGGCGGGGAGACCGAAAGGAGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RLPVRPLLELPA*MWAGRPKGESR
Trigger: CCTGCTCTCTCCTTTCGGTCTCCCCGCCCACATCAACGCGGGCAGCTCCAGGAGGGGACGGACAGGAAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS GCA 72 bp GCGGGAAGATGCCGTTGGGGGCCAACTGATGGAAGATaGAGCGCAGGAACTGCTTGGCCACCCCCGCCGCAT +
Preference number: 6 (lower is better)
Translates to: AGRCRWGPTDGR*SAGTAWPPPPH
Trigger: ATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGGCCCCCAACGGCATCTTCCCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp TTTGAACTGAGTGCACTGCAACCACTTTCGGAGGGCTaGCAGGCCAGCACTGCTCTGGCCCGAGCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: FELSALQPLSEG*QASTALARARQ
Trigger: CTGCCGGGCTCGGGCCAGAGCAGTGCTGGCCTGGCAGCCCTCCGAAAGTGGTTGCAGTGCACTCAGTTCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CCA 72 bp GGGCCAACTGATGGAAGATGCAGCGCAGGAACTGCTTaGCCACCCCCGCCGCATTGCCGGGAACCATCATGC +
Preference number: 6 (lower is better)
Translates to: GPTDGRCSAGTA*PPPPHCREPSC
Trigger: GCATGATGGTTCCCGGCAATGCGGCGGGGGTGGCCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp CCGCGGAAGAGTTGTTCTCGAGAAAGATGCACTCATTaGATGCGACCACCCGAGGGACGCCGGCCGCCGAAC +
Preference number: 6 (lower is better)
Translates to: PRKSCSRERCTH*MRPPEGRRPPN
Trigger: GTTCGGCGGCCGGCGTCCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTCTCGAGAACAACTCTTCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS CCA 72 bp GAAGACGGCATCAGTGCATTGCATCCCAGCAGGCTGTaGCCCTCCACGGAGTCCTCCCGCATGGCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: EDGISALHPSRL*PSTESSRMALV
Trigger: GACCAAAGCCATGCGGGAGGACTCCGTGGAGGGCCACAGCCTGCTGGGATGCAATGCACTGATGCCGTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS TCA 72 bp CCACACTTACTTGTACAAGCGGAGCTGTGCTCAGGCTaGGGACGGAGGGATGGCTGGGGACGGAGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: PHLLVQAELCSG*GRRDGWGRREK
Trigger: CTTCTCCCTCCGTCCCCAGCCATCCCTCCGTCCTCAGCCTGAGCACAGCTCCGCTTGTACAAGTAAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp TGGAACAGCTGCGGGAAGATGCCGTTGGGGGCCAACTaGTGGAAGATGCAGCGCAGGAACTGCTTGGCCACC +
Preference number: 6 (lower is better)
Translates to: WNSCGKMPLGAN*WKMQRRNCLAT
Trigger: GGTGGCCAAGCAGTTCCTGCGCTGCATCTTCCATCAGTTGGCCCCCAACGGCATCTTCCCGCAGCTGTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp TCCGCGGAAGAGTTGTTCTCGAGAAAGATGCACTCATaGCATGCGACCACCCGAGGGACGCCGGCCGCCGAA +
Preference number: 6 (lower is better)
Translates to: SAEELFSRKMHS*HATTRGTPAAE
Trigger: TTCGGCGGCCGGCGTCCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTCTCGAGAACAACTCTTCCGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS CAA 72 bp CGAGCTGTCCCCAAGACCAATGTGACCTCCCAGAACTaGCCGAAGCTCTGTGAAGGTCCCCTGGCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: RAVPKTNVTSQN*PKLCEGPLAPR
Trigger: CCGAGGAGCCAGGGGACCTTCACAGAGCTTCGGCAAGTTCTGGGAGGTCACATTGGTCTTGGGGACAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 90 bp TGTGCAGCACGGAGGTCTGAAAAGGAAGAAGACGGCATCAGTGCATaGCATCCCAGCAGGCTGTGGCCCTCCACGGAGTCCTCCCGCATG +
Preference number: 6 (lower is better)
Translates to: CAARRSEKEEDGISA*HPSRLWPSTESSRM
Trigger: CATGCGGGAGGACTCCGTGGAGGGCCACAGCCTGCTGGGATGCAATGCACTGATGCCGTCTTCTTCCTTTTCAGACCTCCGTGCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS TCA 72 bp GCAGCAGCGGGGCTGCCAGGTCTGGGCTTAAGTGAATaGATGTGGAGAGGACCACGATGGCTAGCCCAAGTG +
Preference number: 6 (lower is better)
Translates to: AAAGLPGLGLSE*MWRGPRWLAQV
Trigger: CACTTGGGCTAGCCATCGTGGTCCTCTCCACATTCATTCACTTAAGCCCAGACCTGGCAGCCCCGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp GGCAGCGTCCTTAGGCTGTGGTGGTTCACGTGGTTCTaGATAGCCTGGAGGCGAAGCTGGAGTCCCGCAGAT +
Preference number: 6 (lower is better)
Translates to: GSVLRLWWFTWF*IAWRRSWSPAD
Trigger: ATCTGCGGGACTCCAGCTTCGCCTCCAGGCTATTCAGAACCACGTGAACCACCACAGCCTAAGGACGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS GCA 72 bp GGAAGAGTTGTTCTCGAGAAAGATGCACTCATTGCATaGGACCACCCGAGGGACGCCGGCCGCCGAACGGAA +
Preference number: 6 (lower is better)
Translates to: GRVVLEKDALIA*DHPRDAGRRTE
Trigger: TTCCGTTCGGCGGCCGGCGTCCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTCTCGAGAACAACTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS GCA 72 bp CCCAGCTGCCGCCGCCGGTTCAGCTCATGTTCTCGCTaGTCAGCATGGAACTCGGCTTCTTTCAACAAGCTG +
Preference number: 6 (lower is better)
Translates to: PSCRRRFSSCSR*SAWNSASFNKL
Trigger: CAGCTTGTTGAAAGAAGCCGAGTTCCATGCTGAGCAGCGAGAACATGAGCTGAACCGGCGGCGGCAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp AGCTCTGGTAGCCACTGCGGGGTTGACATCCTCCACTaGTGTCAGGAAGCAGCAGAAGGCATGTGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: SSGSHCGVDILH*CQEAAEGMCQG
Trigger: TCCCTGGCACATGCCTTCTGCTGCTTCCTGACAGCAGTGGAGGATGTCAACCCCGCAGTGGCTACCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp CGGAGGTCTGAAAAGGAAGAAGACGGCATCAGTGCATaGCATCCCAGCAGGCTGTGGCCCTCCACGGAGTCC +
Preference number: 6 (lower is better)
Translates to: RRSEKEEDGISA*HPSRLWPSTES
Trigger: GGACTCCGTGGAGGGCCACAGCCTGCTGGGATGCAATGCACTGATGCCGTCTTCTTCCTTTTCAGACCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 90 bp ACTGCTCCGCTTTGGTGGACATGGTGCTGTCCAGTTGGAAAGGCTTaGCCCCAAAATCTGTGTCGTGTGAGCTCCCTCGCTCCGCCAGCG +
Preference number: 6 (lower is better)
Translates to: TAPLWWTWCCPVGKA*PQNLCRVSSLAPPA
Trigger: CGCTGGCGGAGCGAGGGAGCTCACACGACACAGATTTTGGGGCAAAGCCTTTCCAACTGGACAGCACCATGTCCACCAAAGCGGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553484.5
ENST00000555664.5
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp AGCAGGCTGTGGCCCTCCACGGAGTCCTCCCGCATGGCTTTGGTCTaGCCAGGGAGCACAGGGGAAGCACAAAGGCATAACGTTATCTCA +
Preference number: 6 (lower is better)
Translates to: SRLWPSTESSRMALV*PGSTGEAQRHNVIS
Trigger: TGAGATAACGTTATGCCTTTGTGCTTCCCCTGTGCTCCCTGGCAAGACCAAAGCCATGCGGGAGGACTCCGTGGAGGGCCACAGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 90 bp TGTCGAATTTTGGAGGTCAGGGTCTCAGGGAGGGAGAGCGCCCTCTaGGATTCCACAGGCCCTTTCACGCTGTCCCTCAGGGAACGTACA +
Preference number: 6 (lower is better)
Translates to: CRILEVRVSGRESAL*DSTGPFTLSLRERT
Trigger: TGTACGTTCCCTGAGGGACAGCGTGAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCCTCCCTGAGACCCTGACCTCCAAAATTCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
CDS TCA 72 bp GCGGATCACAGCTTTGTTATCTCTGTGGTTGCCCCGTaGGATGTCCATGGCTGCAATCTGGGCCAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: ADHSFVISVVAP*DVHGCNLGQPH
Trigger: GTGGGGCTGGCCCAGATTGCAGCCATGGACATCTCACGGGGCAACCACAGAGATAACAAAGCTGTGATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp TCCGAGGACTGGATCTCCACCTGGGCCATTTTGAACTaGGTGCACTGCAACCACTTTCGGAGGGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SEDWISTWAILN*VHCNHFRRAAR
Trigger: CCTGGCAGCCCTCCGAAAGTGGTTGCAGTGCACTCAGTTCAAAATGGCCCAGGTGGAGATCCAGTCCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS TCA 72 bp CCGAAGCTCTGTGAAGGTCCCCTGGCTCCTCGGAGCTaGTTAGTACCAATGTGTCCGGTTTGCCTGCACAGG +
Preference number: 6 (lower is better)
Translates to: PKLCEGPLAPRS*LVPMCPVCLHR
Trigger: CCTGTGCAGGCAAACCGGACACATTGGTACTAATCAGCTCCGAGGAGCCAGGGGACCTTCACAGAGCTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS TCA 72 bp CCCTGTCCCAAACCCGAGCTGTCCCCAAGACCAATGTaGCCTCCCAGAACTTGCCGAAGCTCTGTGAAGGTC +
Preference number: 6 (lower is better)
Translates to: PCPKPELSPRPM*PPRTCRSSVKV
Trigger: GACCTTCACAGAGCTTCGGCAAGTTCTGGGAGGTCACATTGGTCTTGGGGACAGCTCGGGTTTGGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 72 bp GGAGGTCTGAAAAGGAAGAAGACGGCATCAGTGCATTaGATCCCAGCAGGCTGTGGCCCTCCACGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: GGLKRKKTASVH*IPAGCGPPRSP
Trigger: AGGACTCCGTGGAGGGCCACAGCCTGCTGGGATGCAATGCACTGATGCCGTCTTCTTCCTTTTCAGACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CCA 72 bp TCGTCCTTGTTATCAAAGTCAGCATTATCCAGGGAATaGTGGGAAGAGGAGAGGCCCAGCTGCCGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: SSLLSKSALSRE*WEEERPSCRRR
Trigger: CCGGCGGCGGCAGCTGGGCCTCTCCTCTTCCCACCATTCCCTGGATAATGCTGACTTTGATAACAAGGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp TACTGCAGCATGTTCCACGGGCTCGGTGCAGTTGCCTaGGTTCTCCCCATGCTTGCTTGCAGGATTCTCCTC +
Preference number: 6 (lower is better)
Translates to: YCSMFHGLGAVA*VLPMLACRILL
Trigger: GAGGAGAATCCTGCAAGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAACATGCTGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp GGCTCCTCGGAGCTGATTAGTACCAATGTGTCCGGTTaGCCTGCACAGGCTCATGACTGGTGCCTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: GSSELISTNVSG*PAQAHDWCLPW
Trigger: CCAAGGCAGGCACCAGTCATGAGCCTGTGCAGGCAAACCGGACACATTGGTACTAATCAGCTCCGAGGAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 90 bp CGACATCTCGGGGAGAGCAAACGACTTCTGAAGGAGGTCTCGTTTTaGCTTCAGCGTCAGTGGGCTACCGCAGGAGAACTCTGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: RHLGESKRLLKEVSF*LQRQWATAGELWQL
Trigger: GAGCTGCCAGAGTTCTCCTGCGGTAGCCCACTGACGCTGAAGCAAAAACGAGACCTCCTTCAGAAGTCGTTTGCTCTCCCCGAGATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp ATAGGAATTTTGGAGGTCAGGGTCTCAGGGAGGGAGAGCGCCCTCTaGGATTCCACAGGCCCTTTCACGCTGTCCCTCAGGGAACGTACA +
Preference number: 6 (lower is better)
Translates to: IGILEVRVSGRESAL*DSTGPFTLSLRERT
Trigger: TGTACGTTCCCTGAGGGACAGCGTGAAAGGGCCTGTGGAATCCAAGAGGGCGCTCTCCCTCCCTGAGACCCTGACCTCCAAAATTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS CAA 90 bp AGGTCCCCTGGCTCCTCGGAGCTGATTAGTACCAATGTGTCCGGTTaGCCTGCACAGGCTCATGACTGGTGCCTGCCTTGGGTCTACTTT +
Preference number: 6 (lower is better)
Translates to: RSPGSSELISTNVSG*PAQAHDWCLPWVYF
Trigger: AAAGTAGACCCAAGGCAGGCACCAGTCATGAGCCTGTGCAGGCAAACCGGACACATTGGTACTAATCAGCTCCGAGGAGCCAGGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS TCA 72 bp GCATGGAGGAGAAGAGGGACTGCCAGGGAAGACAGCTaGGAGAACTCGGATTTGACGACCCTCCACAGGCTT +
Preference number: 6 (lower is better)
Translates to: AWRRRGTAREDS*ENSDLTTLHRL
Trigger: AAGCCTGTGGAGGGTCGTCAAATCCGAGTTCTCTCAGCTGTCTTCCCTGGCAGTCCCTCTTCTCCTCCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp CTGCTTCCGAGGACTGGATCTCCACCTGGGCCATTTTaGACTGAGTGCACTGCAACCACTTTCGGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LLPRTGSPPGPF*TECTATTFGGL
Trigger: CAGCCCTCCGAAAGTGGTTGCAGTGCACTCAGTTCAAAATGGCCCAGGTGGAGATCCAGTCCTCGGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS TCA 72 bp CAGTTGGAAAGGCTTTGCCCCAAAATCTGTGTCGTGTaGGCTCCCTCGCTCCGCCAGCGATGTTGCGAGGAA +
Preference number: 6 (lower is better)
Translates to: QLERLCPKICVV*APSLRQRCCEE
Trigger: TTCCTCGCAACATCGCTGGCGGAGCGAGGGAGCTCACACGACACAGATTTTGGGGCAAAGCCTTTCCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553484.5
ENST00000555664.5
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp GACCAATGTGACCTCCCAGAACTTGCCGAAGCTCTGTaGAGGTCCCCTGGCTCCTCGGAGCTGATTAGTACC +
Preference number: 6 (lower is better)
Translates to: DQCDLPELAEAL*RSPGSSELIST
Trigger: GGTACTAATCAGCTCCGAGGAGCCAGGGGACCTTCACAGAGCTTCGGCAAGTTCTGGGAGGTCACATTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 72 bp TCGGGTGTCCCACCGAGAGCTGGAGCAGACTGCTCATaGCTGGTCAACCTCATAGGAATTTTGGAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: SGVPPRAGADCS*LVNLIGILEVR
Trigger: CCTGACCTCCAAAATTCCTATGAGGTTGACCAGGCATGAGCAGTCTGCTCCAGCTCTCGGTGGGACACCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS CCA 72 bp GAGGGACGCCGGCCGCCGAACGGAAACATGAATTCGTaGAAATGGCCATCTGGTGACGTAGTAGTGACACAG +
Preference number: 6 (lower is better)
Translates to: EGRRPPNGNMNS*KWPSGDVVVTQ
Trigger: CTGTGTCACTACTACGTCACCAGATGGCCATTTCCACGAATTCATGTTTCCGTTCGGCGGCCGGCGTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS CCA 72 bp CGCCGCCGGTTCAGCTCATGTTCTCGCTGCTCAGCATaGAACTCGGCTTCTTTCAACAAGCTGATCACGGCT +
Preference number: 6 (lower is better)
Translates to: RRRFSSCSRCSA*NSASFNKLITA
Trigger: AGCCGTGATCAGCTTGTTGAAAGAAGCCGAGTTCCATGCTGAGCAGCGAGAACATGAGCTGAACCGGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp CTTCTGAAGGAGGTCTCGTTTTTGCTTCAGCGTCAGTaGGCTACCGCAGGAGAACTCTGGCAGCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: LLKEVSFLLQRQ*ATAGELWQLLW
Trigger: CCAGAGGAGCTGCCAGAGTTCTCCTGCGGTAGCCCACTGACGCTGAAGCAAAAACGAGACCTCCTTCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp CCCGGAAGGTTAGGAAATCGCCCCCGGAGAAATGGGTaGGATTTAATAGGCGGCCAAAGGCTTCCTGTCCGT +
Preference number: 6 (lower is better)
Translates to: PGRLGNRPRRNG*DLIGGQRLPVR
Trigger: ACGGACAGGAAGCCTTTGGCCGCCTATTAAATCCCACCCATTTCTCCGGGGGCGATTTCCTAACCTTCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS CCA 72 bp CGGTCCCGGAAGGTTAGGAAATCGCCCCCGGAGAAATaGGTGGGATTTAATAGGCGGCCAAAGGCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: RSRKVRKSPPEK*VGFNRRPKASC
Trigger: ACAGGAAGCCTTTGGCCGCCTATTAAATCCCACCCATTTCTCCGGGGGCGATTTCCTAACCTTCCGGGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS CAA 90 bp AGAGGTGAGTCTCCGCAGCGGCCCCCACTTCATTACTGTGATGATTaGAGTGGCACCTCTTGCAGTACCGAACAGGCCTGTTTCCGTGAC +
Preference number: 6 (lower is better)
Translates to: RGESPQRPPLHYCDD*SGTSCSTEQACFRD
Trigger: GTCACGGAAACAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAAATCATCACAGTAATGAAGTGGGGGCCGCTGCGGAGACTCACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp TCGGTATCATTCTTTACTGCAGCATGTTCCACGGGCTCGGTGCAGTaGCCTGGGTTCTCCCCATGCTTGCTTGCAGGATTCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SVSFFTAACSTGSVQ*PGFSPCLLAGFSSS
Trigger: GGAGGAGGAGAATCCTGCAAGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAACATGCTGCAGTAAAGAATGATACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp TGGTGGTCGATCCCAGCGTCTTCTGGGAGCAGGTCCTTGATGGTGTaGTCATTCTCAGGAGATTGTTGTCCTGGCGTCTGTTCGGGTGTC +
Preference number: 6 (lower is better)
Translates to: WWSIPASSGSRSLMV*SFSGDCCPGVCSGV
Trigger: GACACCCGAACAGACGCCAGGACAACAATCTCCTGAGAATGACAACACCATCAAGGACCTGCTCCCAGAAGACGCTGGGATCGACCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS TCA 72 bp AACAGGCCTGTTTCCGTGACGACCACAGCACCCTGCTaGGAAGCAGGTGACAACTGCTCTTCTAACGTGGGA +
Preference number: 6 (lower is better)
Translates to: NRPVSVTTTAPC*EAGDNCSSNVG
Trigger: TCCCACGTTAGAAGAGCAGTTGTCACCTGCTTCTCAGCAGGGTGCTGTGGTCGTCACGGAAACAGGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp CTCCGCAGCGGCCCCCACTTCATTACTGTGATGATTTaGGTGGCACCTCTTGCAGTACCGAACAGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LRSGPHFITVMI*VAPLAVPNRPV
Trigger: AACAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAAATCATCACAGTAATGAAGTGGGGGCCGCTGCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp GCGTGGAAGAGGGAGCACATGTGCAGCACGGAGGTCTaGAAAGGAAGAAGACGGCATCAGTGCATTGCATCC +
Preference number: 6 (lower is better)
Translates to: AWKREHMCSTEV*KGRRRHQCIAS
Trigger: GGATGCAATGCACTGATGCCGTCTTCTTCCTTTTCAGACCTCCGTGCTGCACATGTGCTCCCTCTTCCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 72 bp AATGACTTTCCGCGGAAGAGTTGTTCTCGAGAAAGATaGACTCATTGCATGCGACCACCCGAGGGACGCCGG +
Preference number: 6 (lower is better)
Translates to: NDFPRKSCSRER*THCMRPPEGRR
Trigger: CCGGCGTCCCTCGGGTGGTCGCATGCAATGAGTGCATCTTTCTCGAGAACAACTCTTCCGCGGAAAGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS GCA 72 bp TCTTTACTGCAGCATGTTCCACGGGCTCGGTGCAGTTaGCTGGGTTCTCCCCATGCTTGCTTGCAGGATTCT +
Preference number: 6 (lower is better)
Translates to: SLLQHVPRARCS*LGSPHACLQDS
Trigger: AGAATCCTGCAAGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAACATGCTGCAGTAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp CCACAGTCATGGCATTTGTCCGTCATCACCGTCGGCTaGTCGTCAGTGAACTCTTCAGGTGCAGGCACAAAC +
Preference number: 6 (lower is better)
Translates to: PQSWHLSVITVG*SSVNSSGAGTN
Trigger: GTTTGTGCCTGCACCTGAAGAGTTCACTGACGAGCAGCCGACGGTGATGACGGACAAATGCCATGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp GTCTGTTCGGGTGTCCCACCGAGAGCTGGAGCAGACTaGTCATGCCTGGTCAACCTCATAGGAATTTTGGAG +
Preference number: 6 (lower is better)
Translates to: VCSGVPPRAGAD*SCLVNLIGILE
Trigger: CTCCAAAATTCCTATGAGGTTGACCAGGCATGAGCAGTCTGCTCCAGCTCTCGGTGGGACACCCGAACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553484.5
ENST00000629588.2
CDS CCA 72 bp CTCCTCCTCCTCCCCTTCAGGGCCTATGATAAACTCTaGTCTGGAAGAAAGGAGGCTATCCTCCAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: LLLLPFRAYDKL*SGRKEAILQAV
Trigger: GACAGCCTGGAGGATAGCCTCCTTTCTTCCAGACCAGAGTTTATCATAGGCCCTGAAGGGGAGGAGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp GAGGCAGCATTTTTACCGGAGGGGCCGTCATCGCCTTaGTTCATCGTCTCCTCTTCTTCGTCACTCTCGACT +
Preference number: 6 (lower is better)
Translates to: EAAFLPEGPSSP*FIVSSSSSLST
Trigger: AGTCGAGAGTGACGAAGAAGAGGAGACGATGAACCAAGGCGATGACGGCCCCTCCGGTAAAAATGCTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp GCACGTGCAGAGAGAGCACCTACAACACGCCAGAGATaGCGCCAGAGGCTTTTCCTATATCACCTCCATCAC +
Preference number: 6 (lower is better)
Translates to: ARAERAPTTRQR*RQRLFLYHLHH
Trigger: GTGATGGAGGTGATATAGGAAAAGCCTCTGGCGCCATCTCTGGCGTGTTGTAGGTGCTCTCTCTGCACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 72 bp TCTCCGCAGCGGCCCCCACTTCATTACTGTGATGATTaGAGTGGCACCTCTTGCAGTACCGAACAGGCCTGT +
Preference number: 6 (lower is better)
Translates to: SPQRPPLHYCDD*SGTSCSTEQAC
Trigger: ACAGGCCTGTTCGGTACTGCAAGAGGTGCCACTCAAATCATCACAGTAATGAAGTGGGGGCCGCTGCGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp TTCTTTACTGCAGCATGTTCCACGGGCTCGGTGCAGTaGCCTGGGTTCTCCCCATGCTTGCTTGCAGGATTC +
Preference number: 6 (lower is better)
Translates to: FFTAACSTGSVQ*PGFSPCLLAGF
Trigger: GAATCCTGCAAGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAACATGCTGCAGTAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp AGAGGCAGCATTTTTACCGGAGGGGCCGTCATCGCCTaGGTTCATCGTCTCCTCTTCTTCGTCACTCTCGAC +
Preference number: 6 (lower is better)
Translates to: RGSIFTGGAVIA*VHRLLFFVTLD
Trigger: GTCGAGAGTGACGAAGAAGAGGAGACGATGAACCAAGGCGATGACGGCCCCTCCGGTAAAAATGCTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp GGGGAGAGCAAACGACTTCTGAAGGAGGTCTCGTTTTaGCTTCAGCGTCAGTGGGCTACCGCAGGAGAACTC +
Preference number: 6 (lower is better)
Translates to: GESKRLLKEVSF*LQRQWATAGEL
Trigger: GAGTTCTCCTGCGGTAGCCCACTGACGCTGAAGCAAAAACGAGACCTCCTTCAGAAGTCGTTTGCTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp GAGATGTCCATGGCTGCAATCTGGGCCAGCCCCACTTaGAGATGTCCCCCAAAGGTATCTTCATGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: EMSMAAIWASPT*RCPPKVSSCRG
Trigger: GCCTCTGCATGAAGATACCTTTGGGGGACATCTCAAAGTGGGGCTGGCCCAGATTGCAGCCATGGACATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp GGAGGGAGAAGAGGCAGCATTTTTACCGGAGGGGCCGTCATCGCCTaGGTTCATCGTCTCCTCTTCTTCGTCACTCTCGACTATTCTGAG +
Preference number: 6 (lower is better)
Translates to: GGRRGSIFTGGAVIA*VHRLLFFVTLDYSE
Trigger: CTCAGAATAGTCGAGAGTGACGAAGAAGAGGAGACGATGAACCAAGGCGATGACGGCCCCTCCGGTAAAAATGCTGCCTCTTCTCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp GGCACAAACATACTGACTATGCTTGGTGCTGATAGCAGGCTGGATTaGGTGGCACCTCTCATCCTCAATGGCTGTCCCTCCAGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: GTNILTMLGADSRLD*VAPLILNGCPSRSG
Trigger: CCCTGACCTGGAGGGACAGCCATTGAGGATGAGAGGTGCCACCAAATCCAGCCTGCTATCAGCACCAAGCATAGTCAGTATGTTTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp GGACTGCCAGGGAAGACAGCTGAGAGAACTCGGATTTaGCGACCCTCCACAGGCTTGCAATCAACATGTGGT +
Preference number: 6 (lower is better)
Translates to: GLPGKTAERTRI*RPSTGLQSTCG
Trigger: ACCACATGTTGATTGCAAGCCTGTGGAGGGTCGTCAAATCCGAGTTCTCTCAGCTGTCTTCCCTGGCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp TCATCCAGCGACATCTCGGGGAGAGCAAACGACTTCTaGAGGAGGTCTCGTTTTTGCTTCAGCGTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: SSSDISGRANDF*RRSRFCFSVSG
Trigger: CCCACTGACGCTGAAGCAAAAACGAGACCTCCTTCAGAAGTCGTTTGCTCTCCCCGAGATGTCGCTGGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp AGATGTCCATGGCTGCAATCTGGGCCAGCCCCACTTTaGGATGTCCCCCAAAGGTATCTTCATGCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: RCPWLQSGPAPL*DVPQRYLHAEA
Trigger: AGCCTCTGCATGAAGATACCTTTGGGGGACATCTCAAAGTGGGGCTGGCCCAGATTGCAGCCATGGACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp TATCATTCTTTACTGCAGCATGTTCCACGGGCTCGGTaGAGTTGCCTGGGTTCTCCCCATGCTTGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: YHSLLQHVPRAR*SCLGSPHACLQ
Trigger: CTGCAAGCAAGCATGGGGAGAACCCAGGCAACTGCACCGAGCCCGTGGAACATGCTGCAGTAAAGAATGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp CTTTGGTGGACATGGTGCTGTCCAGTTGGAAAGGCTTaGCCCCAAAATCTGTGTCGTGTGAGCTCCCTCGCT +
Preference number: 6 (lower is better)
Translates to: LWWTWCCPVGKA*PQNLCRVSSLA
Trigger: AGCGAGGGAGCTCACACGACACAGATTTTGGGGCAAAGCCTTTCCAACTGGACAGCACCATGTCCACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553484.5
ENST00000555664.5
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp GCATCTGGAAACCCTTCCATAGCTGGGTTCTCGGGGATTTCACTATaGTCAGGCCTCGTAGCAGAGTTCTGTCTAGAACGTCCAGGGTCG +
Preference number: 6 (lower is better)
Translates to: ASGNPSIAGFSGISL*SGLVAEFCLERPGS
Trigger: CGACCCTGGACGTTCTAGACAGAACTCTGCTACGAGGCCTGACAATAGTGAAATCCCCGAGAACCCAGCTATGGAAGGGTTTCCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp TTGGCCATGAACTTCATGAGCACTGTAATCAGCTGGTaGACTGTCTGGTGGTCGATCCCAGCGTCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: LAMNFMSTVISW*TVWWSIPASSG
Trigger: CCCAGAAGACGCTGGGATCGACCACCAGACAGTTCACCAGCTGATTACAGTGCTCATGAAGTTCATGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp TTTGCTCGCAATAAACTGTCCACAGCTGAGCAAAGATaGACGCGTGGAAGAGGGAGCACATGTGCAGCACGG +
Preference number: 6 (lower is better)
Translates to: FARNKLSTAEQR*TRGRGSTCAAR
Trigger: CCGTGCTGCACATGTGCTCCCTCTTCCACGCGTTCATCTTTGCTCAGCTGTGGACAGTTTATTGCGAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CCA 72 bp CGCCGGCCGCCGAACGGAAACATGAATTCGTGGAAATaGCCATCTGGTGACGTAGTAGTGACACAGTTCTTA +
Preference number: 6 (lower is better)
Translates to: RRPPNGNMNSWK*PSGDVVVTQFL
Trigger: TAAGAACTGTGTCACTACTACGTCACCAGATGGCCATTTCCACGAATTCATGTTTCCGTTCGGCGGCCGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS CCA 72 bp CCTTTCACGCTGTCCCTCAGGGAACGTACACTCTTCTaGCGGTTTCTTGCAAAGCGAGCTCTCTTGATCTTC +
Preference number: 6 (lower is better)
Translates to: PFTLSLRERTLF*RFLAKRALLIF
Trigger: GAAGATCAAGAGAGCTCGCTTTGCAAGAAACCGCCAGAAGAGTGTACGTTCCCTGAGGGACAGCGTGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp CCAGGGTCGTTTGGTCTTTGTGCGATATACGCAGCTTaGGTCGGAGGCTTCTCTATGTCACACCGATCTATG +
Preference number: 6 (lower is better)
Translates to: PGSFGLCAIYAA*VGGFSMSHRSM
Trigger: CATAGATCGGTGTGACATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCACAAAGACCAAACGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp GGTTTGCCTGCACAGGCTCATGACTGGTGCCTGCCTTaGGTCTACTTTCTTCCTTTAGCACATCACCTGTCT +
Preference number: 6 (lower is better)
Translates to: GLPAQAHDWCLP*VYFLPLAHHLS
Trigger: AGACAGGTGATGTGCTAAAGGAAGAAAGTAGACCCAAGGCAGGCACCAGTCATGAGCCTGTGCAGGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CCA 72 bp ACCAATGTGTCCGGTTTGCCTGCACAGGCTCATGACTaGTGCCTGCCTTGGGTCTACTTTCTTCCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: TNVSGLPAQAHD*CLPWVYFLPLA
Trigger: TGCTAAAGGAAGAAAGTAGACCCAAGGCAGGCACCAGTCATGAGCCTGTGCAGGCAAACCGGACACATTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 72 bp AGAGTTCTGTCTAGAACGTCCAGGGTCGTTTGGTCTTaGTGCGATATACGCAGCTTGGGTCGGAGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: RVLSRTSRVVWS*CDIRSLGRRLL
Trigger: GAGAAGCCTCCGACCCAAGCTGCGTATATCGCACAAAGACCAAACGACCCTGGACGTTCTAGACAGAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp ACTGATGCTCCAGCTGCCGCTTCATTAACTGGCTCATaGTCAGAACTCCCAGGGATCCCCTTTTCATCTGCC +
Preference number: 6 (lower is better)
Translates to: TDAPAAASLTGS*SELPGIPFSSA
Trigger: GGCAGATGAAAAGGGGATCCCTGGGAGTTCTGACAATGAGCCAGTTAATGAAGCGGCAGCTGGAGCATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629588.2
CDS CAA 72 bp ATACTGACTATGCTTGGTGCTGATAGCAGGCTGGATTaGGTGGCACCTCTCATCCTCAATGGCTGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: ILTMLGADSRLD*VAPLILNGCPS
Trigger: GGAGGGACAGCCATTGAGGATGAGAGGTGCCACCAAATCCAGCCTGCTATCAGCACCAAGCATAGTCAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp AGCGTGTGCATGTCTGCCATGAAATCCAGCACTTCGTaGATGTACTGCCTCACACACTCCATCGCTGCAGTC +
Preference number: 6 (lower is better)
Translates to: SVCMSAMKSSTS*MYCLTHSIAAV
Trigger: GACTGCAGCGATGGAGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATTTCATGGCAGACATGCACACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp TGGTGGTCGATCCCAGCGTCTTCTGGGAGCAGGTCCTTGATGGTGTaGTCATTCTCAGGAGATTGTTGTCGAATTTTGGAGGTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: WWSIPASSGSRSLMV*SFSGDCCRILEVRV
Trigger: GACCCTGACCTCCAAAATTCGACAACAATCTCCTGAGAATGACAACACCATCAAGGACCTGCTCCCAGAAGACGCTGGGATCGACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
CDS CAA 90 bp CCTCGTAGCAGAGTTCTGTCTAGAACGTCCAGGGTCGTTTGGTCTTaGTGCGATATACGCAGCTTGGGTCGGAGGCTTCTCTATGTCACA +
Preference number: 6 (lower is better)
Translates to: PRSRVLSRTSRVVWS*CDIRSLGRRLLYVT
Trigger: TGTGACATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCACAAAGACCAAACGACCCTGGACGTTCTAGACAGAACTCTGCTACGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp AGTTTGGTCAGCGTGTGCATGTCTGCCATGAAATCCAGCACTTCGTaGATGTACTGCCTCACACACTCCATCGCTGCAGTCCCACATCCA +
Preference number: 6 (lower is better)
Translates to: SLVSVCMSAMKSSTS*MYCLTHSIAAVPHP
Trigger: TGGATGTGGGACTGCAGCGATGGAGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATTTCATGGCAGACATGCACACGCTGACCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp TCTAGAACGTCCAGGGTCGTTTGGTCTTTGTGCGATATACGCAGCTaGGGTCGGAGGCTTCTCTATGTCACACCGATCTATGCACGACTT +
Preference number: 6 (lower is better)
Translates to: SRTSRVVWSLCDIRS*GRRLLYVTPIYARL
Trigger: AAGTCGTGCATAGATCGGTGTGACATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCACAAAGACCAAACGACCCTGGACGTTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp TCCATCGCTGCAGTCCCACATCCAGGTACAGAGGCTATCATCTGCTaGCTCAGGATTGTTGACTCAGCTAGTTTGGTTCCAGCATCTGCA +
Preference number: 6 (lower is better)
Translates to: SIAAVPHPGTEAIIC*LRIVDSASLVPASA
Trigger: TGCAGATGCTGGAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGTACCTGGATGTGGGACTGCAGCGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp AAGAAGCAGCCACCGGAATGCCAGGACTGTCAGCAATaGCTTTCCGCGGAAGAGTTGTTCTCGAGAAAGATG +
Preference number: 6 (lower is better)
Translates to: KKQPPECQDCQQ*LSAEELFSRKM
Trigger: CATCTTTCTCGAGAACAACTCTTCCGCGGAAAGTCATTGCTGACAGTCCTGGCATTCCGGTGGCTGCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS TCA 72 bp GAGATACAACGGGGGTGGTTTATCACCCAACGCTACTaGCAGGGAAGGGTCTATACACATCTTCACAGCTGG +
Preference number: 6 (lower is better)
Translates to: EIQRGWFITQRY*QGRVYTHLHSW
Trigger: CCAGCTGTGAAGATGTGTATAGACCCTTCCCTGTCAGTAGCGTTGGGTGATAAACCACCCCCGTTGTATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp TCTGCTTATGTTACTGTTGTCACTGTACAAAGGTCCTaGCGTGGCATGGGGCTTGCAGCTATGATACTGCGC +
Preference number: 6 (lower is better)
Translates to: SAYVTVVTVQRS*RGMGLAAMILR
Trigger: GCGCAGTATCATAGCTGCAAGCCCCATGCCACGGCAGGACCTTTGTACAGTGACAACAGTAACATAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp GTTCTGTCTAGAACGTCCAGGGTCGTTTGGTCTTTGTaGGATATACGCAGCTTGGGTCGGAGGCTTCTCTAT +
Preference number: 6 (lower is better)
Translates to: VLSRTSRVVWSL*DIRSLGRRLLY
Trigger: ATAGAGAAGCCTCCGACCCAAGCTGCGTATATCGCACAAAGACCAAACGACCCTGGACGTTCTAGACAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp ATGTCTGCCATGAAATCCAGCACTTCGTTGATGTACTaGCTCACACACTCCATCGCTGCAGTCCCACATCCA +
Preference number: 6 (lower is better)
Translates to: MSAMKSSTSLMY*LTHSIAAVPHP
Trigger: TGGATGTGGGACTGCAGCGATGGAGTGTGTGAGGCAGTACATCAACGAAGTGCTGGATTTCATGGCAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp AGCCCCACTTTGAGATGTCCCCCAAAGGTATCTTCATaGAGAGGCTGGGAACATGTCTTCATGTGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SPTLRCPPKVSS*RGWEHVFMWLF
Trigger: GAAGAGCCACATGAAGACATGTTCCCAGCCTCTGCATGAAGATACCTTTGGGGGACATCTCAAAGTGGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp CGTGTCGCTACCATTCGGACAAAACGCACATCAAATTaGAGAATTCGGTCCCGGAAGGTTAGGAAATCGCCC +
Preference number: 6 (lower is better)
Translates to: RVATIRTKRTSN*RIRSRKVRKSP
Trigger: GGGCGATTTCCTAACCTTCCGGGACCGAATTCTGCAATTTGATGTGCGTTTTGTCCGAATGGTAGCGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS CCA 72 bp CCAGACTTCCCACTTCATCATCCATCATATACGCAGTaGAGTGAAACCACTGAAACACCATGGCCACCAGCC +
Preference number: 6 (lower is better)
Translates to: PDFPLHHPSYTQ*SETTETPWPPA
Trigger: GGCTGGTGGCCATGGTGTTTCAGTGGTTTCACTCCACTGCGTATATGATGGATGATGAAGTGGGAAGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp AATCCAATCAGGATAACAATAAGATGGTCTGCAACGTaGGAGCCTGCATCCAGAGGAATGGGCAGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: NPIRITIRWSAT*EPASRGMGRQG
Trigger: TCCCTGCCTGCCCATTCCTCTGGATGCAGGCTCCCACGTTGCAGACCATCTTATTGTTATCCTGATTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CAA 72 bp GCACTGCTGATGTCTGACTCAGCGCTGCTTTCATCCTaGGCCATGAACTTCATGAGCACTGTAATCAGCTGG +
Preference number: 6 (lower is better)
Translates to: ALLMSDSALLSS*AMNFMSTVISW
Trigger: CCAGCTGATTACAGTGCTCATGAAGTTCATGGCCAAGGATGAAAGCAGCGCTGAGTCAGACATCAGCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp AGGGAACGTACACTCTTCTGGCGGTTTCTTGCAAAGCGAGCTCTCTaGATCTTCCATAAGGCTGCATCGCTGAGGTTAGCAACATTGGTC +
Preference number: 6 (lower is better)
Translates to: RERTLFWRFLAKRAL*IFHKAASLRLATLV
Trigger: GACCAATGTTGCTAACCTCAGCGATGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTGCAAGAAACCGCCAGAAGAGTGTACGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp GGCACGTTGGCACGTTACACTGGCGTTTCCCAGGCTGTATCTGTTTaGATATTGAGGAATGGCTACTTGTTTCCGGCACACCTGCATCTA +
Preference number: 6 (lower is better)
Translates to: GTLARYTGVSQAVSV*ILRNGYLFPAHLHL
Trigger: TAGATGCAGGTGTGCCGGAAACAAGTAGCCATTCCTCAATATCAAAACAGATACAGCCTGGGAAACGCCAGTGTAACGTGCCAACGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS TCA 72 bp TCATCGTCTCCTCTTCTTCGTCACTCTCGACTATTCTaGGAGGGGGAAGAGGCTCAAATACAAGAGAGTCGC +
Preference number: 6 (lower is better)
Translates to: SSSPLLRHSRLF*EGEEAQIQESR
Trigger: GCGACTCTCTTGTATTTGAGCCTCTTCCCCCTCTCAGAATAGTCGAGAGTGACGAAGAAGAGGAGACGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp CAGTCCCACATCCAGGTACAGAGGCTATCATCTGCTTaGTCAGGATTGTTGACTCAGCTAGTTTGGTTCCAG +
Preference number: 6 (lower is better)
Translates to: QSHIQVQRLSSA*SGLLTQLVWFQ
Trigger: CTGGAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGTACCTGGATGTGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp GCTGCAGTCCCACATCCAGGTACAGAGGCTATCATCTaGTTGCTCAGGATTGTTGACTCAGCTAGTTTGGTT +
Preference number: 6 (lower is better)
Translates to: AAVPHPGTEAII*LLRIVDSASLV
Trigger: AACCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGTACCTGGATGTGGGACTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp CATGTGGCTCTTCAGTTTGGTCAGCGTGTGCATGTCTaGCATGAAATCCAGCACTTCGTTGATGTACTGCCT +
Preference number: 6 (lower is better)
Translates to: HVALQFGQRVHV*HEIQHFVDVLP
Trigger: AGGCAGTACATCAACGAAGTGCTGGATTTCATGGCAGACATGCACACGCTGACCAAACTGAAGAGCCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp CTCTGGAAATCCAATCAGGATAACAATAAGATGGTCTaGAACGTGGGAGCCTGCATCCAGAGGAATGGGCAG +
Preference number: 6 (lower is better)
Translates to: LWKSNQDNNKMV*NVGACIQRNGQ
Trigger: CTGCCCATTCCTCTGGATGCAGGCTCCCACGTTGCAGACCATCTTATTGTTATCCTGATTGGATTTCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CCA 72 bp CTAGCCCAAGTGTCTCTTCATCGTATTCTTCAAGAATaGCCCCACAGTCATGGCATTTGTCCGTCATCACCG +
Preference number: 6 (lower is better)
Translates to: LAQVSLHRILQE*PHSHGICPSSP
Trigger: CGGTGATGACGGACAAATGCCATGACTGTGGGGCCATTCTTGAAGAATACGATGAAGAGACACTTGGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp ACACTCTTCTGGCGGTTTCTTGCAAAGCGAGCTCTCTaGATCTTCCATAAGGCTGCATCGCTGAGGTTAGCA +
Preference number: 6 (lower is better)
Translates to: TLFWRFLAKRAL*IFHKAASLRLA
Trigger: TGCTAACCTCAGCGATGCAGCCTTATGGAAGATCAAGAGAGCTCGCTTTGCAAGAAACCGCCAGAAGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp AACCCTTCCATAGCTGGGTTCTCGGGGATTTCACTATaGTCAGGCCTCGTAGCAGAGTTCTGTCTAGAACGT +
Preference number: 6 (lower is better)
Translates to: NPSIAGFSGISL*SGLVAEFCLER
Trigger: ACGTTCTAGACAGAACTCTGCTACGAGGCCTGACAATAGTGAAATCCCCGAGAACCCAGCTATGGAAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp GCAGTCCCACATCCAGGTACAGAGGCTATCATCTGCTaGCTCAGGATTGTTGACTCAGCTAGTTTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: AVPHPGTEAIIC*LRIVDSASLVP
Trigger: TGGAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGTACCTGGATGTGGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp CATGTCTTCATGTGGCTCTTCAGTTTGGTCAGCGTGTaGATGTCTGCCATGAAATCCAGCACTTCGTTGATG +
Preference number: 6 (lower is better)
Translates to: HVFMWLFSLVSV*MSAMKSSTSLM
Trigger: CATCAACGAAGTGCTGGATTTCATGGCAGACATGCACACGCTGACCAAACTGAAGAGCCACATGAAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp TTGTTAATTGCATTGTGGCATTCAATGTGCTGGCAGTaGATGGGATTCCAAGCTGTGTACTGCAACCCCCTG +
Preference number: 6 (lower is better)
Translates to: LLIALWHSMCWQ*MGFQAVYCNPL
Trigger: CAGGGGGTTGCAGTACACAGCTTGGAATCCCATCCACTGCCAGCACATTGAATGCCACAATGCAATTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp TCCAGAATGTTGAAGGAGATGTCGAGGTACTCTCTCTaGATAGCACTGACAGCAATCTTCCTCTGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SRMLKEMSRYSL*IALTAIFLCFL
Trigger: GAGGAAGCAGAGGAAGATTGCTGTCAGTGCTATCCAGAGAGAGTACCTCGACATCTCCTTCAACATTCTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp AGAAGAAAAGTCTTTGGAACAATCCTCCACACTTACTaGTACAAGCGGAGCTGTGCTCAGGCTGAGGACGGA +
Preference number: 6 (lower is better)
Translates to: RRKVFGTILHTY*YKRSCAQAEDG
Trigger: TCCGTCCTCAGCCTGAGCACAGCTCCGCTTGTACAAGTAAGTGTGGAGGATTGTTCCAAAGACTTTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp ATCCAGGTACAGAGGCTATCATCTGCTTGCTCAGGATaGTTGACTCAGCTAGTTTGGTTCCAGCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: IQVQRLSSACSG*LTQLVWFQHLH
Trigger: GTGCAGATGCTGGAACCAAACTAGCTGAGTCAACAATCCTGAGCAAGCAGATGATAGCCTCTGTACCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp ACACATGGTCATGGGCACTGTCAAATTGGAGGCATCTaGGTTTTCCTTCTTCCCTGTGCGGGACAAAATGCT +
Preference number: 6 (lower is better)
Translates to: THGHGHCQIGGI*VFLLPCAGQNA
Trigger: AGCATTTTGTCCCGCACAGGGAAGAAGGAAAACCAAGATGCCTCCAATTTGACAGTGCCCATGACCATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000627404.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp ACAGGAAAAAGACACATGGTCATGGGCACTGTCAAATaGGAGGCATCTTGGTTTTCCTTCTTCCCTGTGCGG +
Preference number: 6 (lower is better)
Translates to: TGKRHMVMGTVK*EASWFSFFPVR
Trigger: CCGCACAGGGAAGAAGGAAAACCAAGATGCCTCCAATTTGACAGTGCCCATGACCATGTGTCTTTTTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000627404.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp GCACGTTACACTGGCGTTTCCCAGGCTGTATCTGTTTaGATATTGAGGAATGGCTACTTGTTTCCGGCACAC +
Preference number: 6 (lower is better)
Translates to: ARYTGVSQAVSV*ILRNGYLFPAH
Trigger: GTGTGCCGGAAACAAGTAGCCATTCCTCAATATCAAAACAGATACAGCCTGGGAAACGCCAGTGTAACGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS CAA 90 bp TCTGATGGCTTCCAGCCATTCCGGCATAATACACTCCCAGACAGATaGATTGATCACATTATAGGGGATCAGGCAGAGGATTCGGTTGAG +
Preference number: 6 (lower is better)
Translates to: SDGFQPFRHNTLPDR*IDHIIGDQAEDSVE
Trigger: CTCAACCGAATCCTCTGCCTGATCCCCTATAATGTGATCAATCAATCTGTCTGGGAGTGTATTATGCCGGAATGGCTGGAAGCCATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp AGGGAAGGGTCTATACACATCTTCACAGCTGGTTTGTTAATTGCATaGTGGCATTCAATGTGCTGGCAGTGGATGGGATTCCAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: REGSIHIFTAGLLIA*WHSMCWQWMGFQAV
Trigger: CACAGCTTGGAATCCCATCCACTGCCAGCACATTGAATGCCACAATGCAATTAACAAACCAGCTGTGAAGATGTGTATAGACCCTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp TCACAATCAAAGTCAATAGTCCTTCCTCCTGGGTGTCCAAAATTCTaGAAAGGGCTACGAAACGGACTACGCAAAGGACTCCGAAACGGA +
Preference number: 6 (lower is better)
Translates to: SQSKSIVLPPGCPKF*KGLRNGLRKGLRNG
Trigger: TCCGTTTCGGAGTCCTTTGCGTAGTCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACCCAGGAGGAAGGACTATTGACTTTGATTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp GTAGAAGGATCTGGATCTTTCTGTTCTCCCAGTTTGTCCAGAATGTaGAAGGAGATGTCGAGGTACTCTCTCTGGATAGCACTGACAGCA +
Preference number: 6 (lower is better)
Translates to: VEGSGSFCSPSLSRM*KEMSRYSLWIALTA
Trigger: TGCTGTCAGTGCTATCCAGAGAGAGTACCTCGACATCTCCTTCAACATTCTGGACAAACTGGGAGAACAGAAAGATCCAGATCCTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp TCCACTCTAATCCTGGATCTCAGCTTCTTGAGAAAAGAACAGCCTTaGGTGACACAGGATTACACAGCATTCTTCCACAAGGCTGACTGC +
Preference number: 6 (lower is better)
Translates to: STLILDLSFLRKEQP*VTQDYTAFFHKADC
Trigger: GCAGTCAGCCTTGTGGAAGAATGCTGTGTAATCCTGTGTCACCAAAGGCTGTTCTTTTCTCAAGAAGCTGAGATCCAGGATTAGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 72 bp ACAGCTGGTTTGTTAATTGCATTGTGGCATTCAATGTaGTGGCAGTGGATGGGATTCCAAGCTGTGTACTGC +
Preference number: 6 (lower is better)
Translates to: TAGLLIALWHSM*WQWMGFQAVYC
Trigger: GCAGTACACAGCTTGGAATCCCATCCACTGCCAGCACATTGAATGCCACAATGCAATTAACAAACCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp CTACCATCACTTTGTTATGGGCCATTAGCTGAAGGATaGTGGGTGTCACCCTACTCCAAAATTCTAGTGCTG +
Preference number: 6 (lower is better)
Translates to: LPSLCYGPLAEG*WVSPYSKILVL
Trigger: CAGCACTAGAATTTTGGAGTAGGGTGACACCCAGCATCCTTCAGCTAATGGCCCATAACAAAGTGATGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CCA 72 bp GCTGGTTTGTTAATTGCATTGTGGCATTCAATGTGCTaGCAGTGGATGGGATTCCAAGCTGTGTACTGCAAC +
Preference number: 6 (lower is better)
Translates to: AGLLIALWHSMC*QWMGFQAVYCN
Trigger: GTTGCAGTACACAGCTTGGAATCCCATCCACTGCCAGCACATTGAATGCCACAATGCAATTAACAAACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CCA 72 bp GATTGCTCTGGAAATCCAATCAGGATAACAATAAGATaGTCTGCAACGTGGGAGCCTGCATCCAGAGGAATG +
Preference number: 6 (lower is better)
Translates to: DCSGNPIRITIR*SATWEPASRGM
Trigger: CATTCCTCTGGATGCAGGCTCCCACGTTGCAGACCATCTTATTGTTATCCTGATTGGATTTCCAGAGCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CAA 72 bp AAGTCAATAGTCCTTCCTCCTGGGTGTCCAAAATTCTaGAAAGGGCTACGAAACGGACTACGCAAAGGACTC +
Preference number: 6 (lower is better)
Translates to: KSIVLPPGCPKF*KGLRNGLRKGL
Trigger: GAGTCCTTTGCGTAGTCCGTTTCGTAGCCCTTTCAAGAATTTTGGACACCCAGGAGGAAGGACTATTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp ATCTTCCATAAGGCTGCATCGCTGAGGTTAGCAACATaGGTCCTCACAGCAGTGATGGTTGTAGGAAAAGGA +
Preference number: 6 (lower is better)
Translates to: IFHKAASLRLAT*VLTAVMVVGKG
Trigger: TCCTTTTCCTACAACCATCACTGCTGTGAGGACCAATGTTGCTAACCTCAGCGATGCAGCCTTATGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp GAAGCTGAATTCATTCTGATTTTGGAGATTTGTAGCGACGGCACTTaGCTCGCAATAAACTGTCCACAGCTGAGCAAAGATGAACGCGTG +
Preference number: 6 (lower is better)
Translates to: EAEFILILEICSDGT*LAINCPQLSKDERV
Trigger: CACGCGTTCATCTTTGCTCAGCTGTGGACAGTTTATTGCGAGCAAAGTGCCGTCGCTACAAATCTCCAAAATCAGAATGAATTCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS TCA 72 bp TGCAGAGGCTCACTAAGAACCATATTCCGAATTGACTaGGCAGCCTCTGATCGTGTTTATCATCGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: CRGSLRTIFRID*AASDRVYHRPC
Trigger: ACAAGGACGATGATAAACACGATCAGAGGCTGCTCAGTCAATTCGGAATATGGTTCTTAGTGAGCCTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp GTATCAAACTGGAAGTCAAGACAAAGACATAGACCCTaGAATGCTGGCCTCTTTATGGTGTCAAGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: VSNWKSRQRHRP*NAGLFMVSSRR
Trigger: TCTCCTGCTTGACACCATAAAGAGGCCAGCATTGCAGGGTCTATGTCTTTGTCTTGACTTCCAGTTTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp ACTAGGAGAATCCATAGGCAAAGCTTCCATGAAGGTTaGAATGTTTTCCAAACAGCGAATCATAGCACCCCC +
Preference number: 6 (lower is better)
Translates to: TRRIHRQSFHEG*NVFQTANHSTP
Trigger: GGGGGTGCTATGATTCGCTGTTTGGAAAACATTGCAACCTTCATGGAAGCTTTGCCTATGGATTCTCCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS GCA 72 bp AGTTACAAAGTCATGATTCATCACCTTGAAACTATCTaGTGTGCTCTCTTCTCCACCAGTGGGAGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: SYKVMIHHLETI*CALFSTSGSVL
Trigger: GAGCACACTCCCACTGGTGGAGAAGAGAGCACAGCAGATAGTTTCAAGGTGATGAATCATGACTTTGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CCA 72 bp CGTTTCCCAGGCTGTATCTGTTTTGATATTGAGGAATaGCTACTTGTTTCCGGCACACCTGCATCTAACGTA +
Preference number: 6 (lower is better)
Translates to: RFPGCICFDIEE*LLVSGTPASNV
Trigger: TACGTTAGATGCAGGTGTGCCGGAAACAAGTAGCCATTCCTCAATATCAAAACAGATACAGCCTGGGAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555664.5
ENST00000629205.2
CDS CAA 72 bp TGTAGCTGGGCTTCCAAAGAAAGCGTCTCAAATCTATaGACAAAGAACTCCCAGCTCAGAGCAGGAATATCC +
Preference number: 6 (lower is better)
Translates to: CSWASKESVSNL*TKNSQLRAGIS
Trigger: GGATATTCCTGCTCTGAGCTGGGAGTTCTTTGTCAATAGATTTGAGACGCTTTCTTTGGAAGCCCAGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp TCTGGATCTTTCTGTTCTCCCAGTTTGTCCAGAATGTaGAAGGAGATGTCGAGGTACTCTCTCTGGATAGCA +
Preference number: 6 (lower is better)
Translates to: SGSFCSPSLSRM*KEMSRYSLWIA
Trigger: TGCTATCCAGAGAGAGTACCTCGACATCTCCTTCAACATTCTGGACAAACTGGGAGAACAGAAAGATCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp TTCCCCAACCTGCTTGGATCAAATTGTTTGTTTTTAAACCCATTATaGCTAAACCAGAGTGTTGACACTGAGCGCCGAGGAGTCCACTCA +
Preference number: 6 (lower is better)
Translates to: FPNLLGSNCLFLNPL*LNQSVDTERRGVHS
Trigger: TGAGTGGACTCCTCGGCGCTCAGTGTCAACACTCTGGTTTAGCAATAATGGGTTTAAAAACAAACAATTTGATCCAAGCAGGTTGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256339.8
ENST00000553484.5
ENST00000554549.1
ENST00000627695.2
ENST00000629588.2
ENST00000630296.1
CDS TCA 72 bp GTGGAAAAGCATTTGCACAGCTGGAGGCTTCACTTGTaGAGGCCCATACGCAATCACATACAAAAGATCTTT +
Preference number: 6 (lower is better)
Translates to: VEKHLHSWRLHL*RPIRNHIQKIF
Trigger: AAAGATCTTTTGTATGTGATTGCGTATGGGCCTTCACAAGTGAAGCCTCCAGCTGTGCAAATGCTTTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp ACCATTTCTACCATCACTTTGTTATGGGCCATTAGCTaGAGGATGCTGGGTGTCACCCTACTCCAAAATTCT +
Preference number: 6 (lower is better)
Translates to: TISTITLLWAIS*RMLGVTLLQNS
Trigger: AGAATTTTGGAGTAGGGTGACACCCAGCATCCTTCAGCTAATGGCCCATAACAAAGTGATGGTAGAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS GCA 72 bp TTTACAAAGTTCCCCTGTGTAGGTCATGCCAATGTGTaGTTTAGTGAGTTCCCAACTGGCCTTCTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: FTKFPCVGHANV*FSEFPTGLLVF
Trigger: GAAAACAAGAAGGCCAGTTGGGAACTCACTAAAGCACACATTGGCATGACCTACACAGGGGAACTTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 72 bp TGTCAGTATCGCCGTGAAGCTGAATTCATTCTGATTTaGGAGATTTGTAGCGACGGCACTTTGCTCGCAATA +
Preference number: 6 (lower is better)
Translates to: CQYRREAEFILI*EICSDGTLLAI
Trigger: TATTGCGAGCAAAGTGCCGTCGCTACAAATCTCCAAAATCAGAATGAATTCAGCTTCACGGCGATACTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CAA 90 bp CAATCCAAATGTAGCTGGGCTTCCAAAGAAAGCGTCTCAAATCTATaGACAAAGAACTCCCAGCTCAGAGCAGGAATATCCTGCTTAAGA +
Preference number: 6 (lower is better)
Translates to: QSKCSWASKESVSNL*TKNSQLRAGISCLR
Trigger: TCTTAAGCAGGATATTCCTGCTCTGAGCTGGGAGTTCTTTGTCAATAGATTTGAGACGCTTTCTTTGGAAGCCCAGCTACATTTGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp GAAAGTCCTTTAGTAGAAGGATCTGGATCTTTCTGTTCTCCCAGTTaGTCCAGAATGTTGAAGGAGATGTCGAGGTACTCTCTCTGGATA +
Preference number: 6 (lower is better)
Translates to: ESPLVEGSGSFCSPS*SRMLKEMSRYSLWI
Trigger: TATCCAGAGAGAGTACCTCGACATCTCCTTCAACATTCTGGACAAACTGGGAGAACAGAAAGATCCAGATCCTTCTACTAAAGGACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp ATCCTTGTGCAGAAATGGAGGAAAGGTAGCCAACGTTaGTATCATCGTGTAGGGCAAAGTACTCAGAATATC +
Preference number: 6 (lower is better)
Translates to: ILVQKWRKGSQR*YHRVGQSTQNI
Trigger: GATATTCTGAGTACTTTGCCCTACACGATGATATCAACGTTGGCTACCTTTCCTCCATTTCTGCACAAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp CAAGCAGAAGAAGGTTTGTATCTGGTAAAGGAGATTTaGGCTTTAGGGCCTGCAGAAGTTCTAGAACAACAC +
Preference number: 6 (lower is better)
Translates to: QAEEGLYLVKEI*ALGPAEVLEQH
Trigger: GTGTTGTTCTAGAACTTCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAGATACAAACCTTCTTCTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp GTTATCTCAGAGTTACAAAGTCATGATTCATCACCTTaGAACTATCTGCTGTGCTCTCTTCTCCACCAGTGG +
Preference number: 6 (lower is better)
Translates to: VISELQSHDSSP*NYLLCSLLHQW
Trigger: CCACTGGTGGAGAAGAGAGCACAGCAGATAGTTTCAAGGTGATGAATCATGACTTTGTAACTCTGAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CCA 72 bp GGAATCGACTGCCTAATTCCTTTTGTGAACATCATTTaGATCATTGGGATGGGTGCGCCATTTTATCACATC +
Preference number: 6 (lower is better)
Translates to: GIDCLIPFVNII*IIGMGAPFYHI
Trigger: GATGTGATAAAATGGCGCACCCATCCCAATGATCCAAATGATGTTCACAAAAGGAATTAGGCAGTCGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 72 bp TTCATTCTGATTTTGGAGATTTGTAGCGACGGCACTTaGCTCGCAATAAACTGTCCACAGCTGAGCAAAGAT +
Preference number: 6 (lower is better)
Translates to: FILILEICSDGT*LAINCPQLSKD
Trigger: ATCTTTGCTCAGCTGTGGACAGTTTATTGCGAGCAAAGTGCCGTCGCTACAAATCTCCAAAATCAGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000554549.1
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
ENST00000630296.1
CDS CAA 72 bp ACAATTGAGGTTTTTGTGGGAGGACAGGTTTATTTTTaGGCAGCATGTCAAAGAGCATTCTGGGTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: TIEVFVGGQVYF*AACQRAFWVSK
Trigger: CTTGCTGACCCAGAATGCTCTTTGACATGCTGCCAAAAAATAAACCTGTCCTCCCACAAAAACCTCAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 72 bp ACAAGCAGAAGAAGGTTTGTATCTGGTAAAGGAGATTaGAGCTTTAGGGCCTGCAGAAGTTCTAGAACAACA +
Preference number: 6 (lower is better)
Translates to: TSRRRFVSGKGD*SFRACRSSRTT
Trigger: TGTTGTTCTAGAACTTCTGCAGGCCCTAAAGCTCAAATCTCCTTTACCAGATACAAACCTTCTTCTGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp CTCGCAGGACGCTTAACAAGGTCTGAGAAAAGTATTTCAAGGTGTTaGCAATATCTGTTCCTGATGGTACAGGATAAATGTTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: LAGRLTRSEKSISRC*QYLFLMVQDKCCGE
Trigger: TTCTCCACAACATTTATCCTGTACCATCAGGAACAGATATTGCAAACACCTTGAAATACTTTTCTCAGACCTTGTTAAGCGTCCTGCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256339.8
ENST00000627695.2
CDS CAA 90 bp CTCAGAGCAGGAATATCCTGCTTAAGAAAGTGCAAGAGTAAAAGCTaGCTCAAAATTGTGGGTCTGTCTTTAACCACAGTATCAAACTGG +
Preference number: 6 (lower is better)
Translates to: LRAGISCLRKCKSKS*LKIVGLSLTTVSNW
Trigger: CCAGTTTGATACTGTGGTTAAAGACAGACCCACAATTTTGAGCAAGCTTTTACTCTTGCACTTTCTTAAGCAGGATATTCCTGCTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp CTGATAAGGTTTCCATTAGCAATTGCGATGCATACGGTCTTAATCTaGCAGAAATCACTTACCTTTGATTGCTCTGGAAATCCAATCAGG +
Preference number: 6 (lower is better)
Translates to: LIRFPLAIAMHTVLI*QKSLTFDCSGNPIR
Trigger: CCTGATTGGATTTCCAGAGCAATCAAAGGTAAGTGATTTCTGCAAGATTAAGACCGTATGCATCGCAATTGCTAATGGAAACCTTATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS TCA 72 bp ATCGCAAGTACCATAGTTAGGAATCAAACCCGGATCTaGGTAGAAATATTAGGAATCGACTGCCTAATTCCT +
Preference number: 6 (lower is better)
Translates to: IASTIVRNQTRI*VEILGIDCLIP
Trigger: AGGAATTAGGCAGTCGATTCCTAATATTTCTACTCAGATCCGGGTTTGATTCCTAACTATGGTACTTGCGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CCA 72 bp AAAATTGTGGGTCTGTCTTTAACCACAGTATCAAACTaGAAGTCAAGACAAAGACATAGACCCTGCAATGCT +
Preference number: 6 (lower is better)
Translates to: KIVGLSLTTVSN*KSRQRHRPCNA
Trigger: AGCATTGCAGGGTCTATGTCTTTGTCTTGACTTCCAGTTTGATACTGTGGTTAAAGACAGACCCACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp ATAGCCATTGGTAGAAAAGATGTGCTAAGATATTCAATGATATCCTaGTGCAGAAATGGAGGAAAGGTAGCCAACGTTGATATCATCGTG +
Preference number: 6 (lower is better)
Translates to: IAIGRKDVLRYSMIS*CRNGGKVANVDIIV
Trigger: CACGATGATATCAACGTTGGCTACCTTTCCTCCATTTCTGCACAAGGATATCATTGAATATCTTAGCACATCTTTTCTACCAATGGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 90 bp ATTACAGCAACTTTTTCCACTGCTTCAAACCTCATCTTCCAGTCTTaGCTGTTGAAATTGCCATTTATGATTGTCCAGAAGATGTCAGCA +
Preference number: 6 (lower is better)
Translates to: ITATFSTASNLIFQS*LLKLPFMIVQKMSA
Trigger: TGCTGACATCTTCTGGACAATCATAAATGGCAATTTCAACAGCAAAGACTGGAAGATGAGGTTTGAAGCAGTGGAAAAAGTTGCTGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp AACATTTTGCTTAATACTTCCCTGAATTCTTTTAACTaGTTATCTGGGACTTCTGTTCTGATGGCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: NILLNTSLNSFN*LSGTSVLMASS
Trigger: GCTGGAAGCCATCAGAACAGAAGTCCCAGATAATCAGTTAAAAGAATTCAGGGAAGTATTAAGCAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS TCA 72 bp GCATACGGTCTTAATCTTGCAGAAATCACTTACCTTTaGTTGCTCTGGAAATCCAATCAGGATAACAATAAG +
Preference number: 6 (lower is better)
Translates to: AYGLNLAEITYL*LLWKSNQDNNK
Trigger: CTTATTGTTATCCTGATTGGATTTCCAGAGCAATCAAAGGTAAGTGATTTCTGCAAGATTAAGACCGTATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS GCA 72 bp AGAAAAGATGTGCTAAGATATTCAATGATATCCTTGTaGAGAAATGGAGGAAAGGTAGCCAACGTTGATATC +
Preference number: 6 (lower is better)
Translates to: RKDVLRYSMISL*RNGGKVANVDI
Trigger: GATATCAACGTTGGCTACCTTTCCTCCATTTCTGCACAAGGATATCATTGAATATCTTAGCACATCTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256339.8
ENST00000393151.6
ENST00000553484.5
ENST00000555664.5
ENST00000615108.1
ENST00000621021.1
ENST00000627404.2
ENST00000627695.2
ENST00000629205.2
ENST00000629588.2
CDS CAA 72 bp TTTCCATTAGCAATTGCGATGCATACGGTCTTAATCTaGCAGAAATCACTTACCTTTGATTGCTCTGGAAAT +
Preference number: 6 (lower is better)
Translates to: FPLAIAMHTVLI*QKSLTFDCSGN
Trigger: ATTTCCAGAGCAATCAAAGGTAAGTGATTTCTGCAAGATTAAGACCGTATGCATCGCAATTGCTAATGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS TCA 72 bp AGAAATGCCTGGGAAGCCAACTCTTGCTTGACTCCATaGTTTATCTTTATAAAAGTAAGCCGAAAAACAATT +
Preference number: 6 (lower is better)
Translates to: RNAWEANSCLTP*FIFIKVSRKTI
Trigger: AATTGTTTTTCGGCTTACTTTTATAAAGATAAATCATGGAGTCAAGCAAGAGTTGGCTTCCCAGGCATTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1
CDS CAA 72 bp ATTATTTTGAGACAGAAATGCCTGGGAAGCCAACTCTaGCTTGACTCCATGATTTATCTTTATAAAAGTAAG +
Preference number: 6 (lower is better)
Translates to: IILRQKCLGSQL*LDSMIYLYKSK
Trigger: CTTACTTTTATAAAGATAAATCATGGAGTCAAGCAAGAGTTGGCTTCCCAGGCATTTCTGTCTCAAAATAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554549.1
ENST00000630296.1