RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC5D (Homo sapiens)

Ensembl gene IDs: ENSG00000156687

Ensembl transcript IDs: ENST00000287272.6, ENST00000404895.7, ENST00000416672.5, ENST00000420357.5, ENST00000449677.1, ENST00000453357.6, ENST00000474634.1

Found 1082 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGTGGGCCGGAGAGGAAGATTTCTCAGCTCCTTCACGATTCCTGTaGCCTTTACAGAGCTGGAACAGAGACCTCTGCGAGAACTTTGCC +
Preference number: 1 (lower is better)
Translates to: QWAGEEDFSAPSRFL*PLQSWNRDLCENFA
Trigger: GGCAAAGTTCTCGCAGAGGTCTCTGTTCCAGCTCTGTAAAGGTCACAGGAATCGTGAAGGAGCTGAGAAATCTTCCTCTCCGGCCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR TCA 90 bp CCACAGCTACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTaGGGAGTTAACCCAAATGTGGATTCCAAGGAGATAGTAGAGCCC +
Preference number: 1 (lower is better)
Translates to: PQLLLPSLLSLPLQI*GVNPNVDSKEIVEP
Trigger: GGGCTCTACTATCTCCTTGGAATCCACATTTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTAGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR TCA 90 bp TTTAGTTTCTTCAACAGGGGAATCTCACTGATTATAAATGAAGGCTaGATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCAT +
Preference number: 1 (lower is better)
Translates to: FSFFNRGISLIINEG*IPPTPLGRKRPLSH
Trigger: ATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAATCAGTGAGATTCCCCTGTTGAAGAAACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
3UTR GCA 90 bp ATTGATAATACAAGGCACAAAAAGTGTGGTATGAAGCCAAGGCTATaGTTCATTCAACCTCTCTCCTCTGGCTTGCTCAGTCCTTCAGCT +
Preference number: 1 (lower is better)
Translates to: IDNTRHKKCGMKPRL*FIQPLSSGLLSPSA
Trigger: AGCTGAAGGACTGAGCAAGCCAGAGGAGAGAGGTTGAATGAAGCATAGCCTTGGCTTCATACCACACTTTTTGTGCCTTGTATTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR TCA 90 bp TTCCCTGACTACTTTTTATTCGAATGTAACCAACCTCTAAGTAGCTaGCTAGCTGCCTTGTGGTTCATCTGGGTCCTTGACTTTGGTTGT +
Preference number: 1 (lower is better)
Translates to: FPDYFLFECNQPLSS*LAALWFIWVLDFGC
Trigger: ACAACCAAAGTCAAGGACCCAGATGAACCACAAGGCAGCTAGTCAGCTACTTAGAGGTTGGTTACATTCGAATAAAAAGTAGTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR TCA 90 bp TACTTCAGATCACGGTACTACACACTAGTGACTAACGGCCAGGTCTaGTTTCCATCCCCTGTTACTTTTCGAAGAATTACAGTGTACAAG +
Preference number: 1 (lower is better)
Translates to: YFRSRYYTLVTNGQV*FPSPVTFRRITVYK
Trigger: CTTGTACACTGTAATTCTTCGAAAAGTAACAGGGGATGGAAATCAGACCTGGCCGTTAGTCACTAGTGTGTAGTACCGTGATCTGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR TCA 90 bp TACTTTTCGAAGAATTACAGTGTACAAGTTGCCATTTCAATGTCATaGATGACCCTGGAGTGGGGATGTCAGGAGTTCATGGTAGACACT +
Preference number: 1 (lower is better)
Translates to: YFSKNYSVQVAISMS*MTLEWGCQEFMVDT
Trigger: AGTGTCTACCATGAACTCCTGACATCCCCACTCCAGGGTCATTCATGACATTGAAATGGCAACTTGTACACTGTAATTCTTCGAAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR TCA 90 bp TCCACCACACCTTGGTCTGTAAATCTCACAAATGTGGGTTCTCTTTaGAATTGTATTGTAACATACTGTGCAATCCTGACATGCAGTGAC +
Preference number: 1 (lower is better)
Translates to: STTPWSVNLTNVGSL*NCIVTYCAILTCSD
Trigger: GTCACTGCATGTCAGGATTGCACAGTATGTTACAATACAATTTCAAAGAGAACCCACATTTGTGAGATTTACAGACCAAGGTGTGGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR TCA 90 bp CATTCAGAATTTACATTGATAATACAAGGCACAAAAAGTGTGGTATaGAGCCAAGGCTATGCTTCATTCAACCTCTCTCCTCTGGCTTGC +
Preference number: 1 (lower is better)
Translates to: HSEFTLIIQGTKSVV*SQGYASFNLSPLAC
Trigger: GCAAGCCAGAGGAGAGAGGTTGAATGAAGCATAGCCTTGGCTTCATACCACACTTTTTGTGCCTTGTATTATCAATGTAAATTCTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR CCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTaGCAACCCTGTTTCACGTCTAAAAGCCATTTTTACAATGATCTC +
Preference number: 1 (lower is better)
Translates to: ILNALLDVVEVIQMG*QPCFTSKSHFYNDL
Trigger: GAGATCATTGTAAAAATGGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR TCA 90 bp GTTGTGACAGGCACATATTACAATAGGACTAAATTTAGGTCACAGTaGATAACTAAGTTCAAGTGTAAGCTCACTTTTTATCTGATCTGC +
Preference number: 1 (lower is better)
Translates to: VVTGTYYNRTKFRSQ*ITKFKCKLTFYLIC
Trigger: GCAGATCAGATAAAAAGTGAGCTTACACTTGAACTTAGTTATTCACTGTGACCTAAATTTAGTCCTATTGTAATATGTGCCTGTCACAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTTCCCCCAACGCCACTaGGCAGAAAGCGGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: CQLVENSDNLVPESAGPLFPQRH*AESGLF
Trigger: AAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR TCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAAGTCTGGTGAATCTGTaGAGTGCACCATTTTGGTGG +
Preference number: 2 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGSLVNL*SAPFWW
Trigger: CCACCAAAATGGTGCACTTCACAGATTCACCAGACT...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR CCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACCAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATG +
Preference number: 2 (lower is better)
Translates to: LVENSDNLVPESAGPLGHQMSPS*PSLCLM
Trigger: CATGAGACAGAGTGATGGCCAGCTTGGGGACATTTG...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR TCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCATATCCACCAGAAGATaGGCAAGAGCAAATCTGTTC +
Preference number: 2 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFISTRR*ARANLF
Trigger: GAACAGATTTGCTCTTGCTCATCTTCTGGTGGATAT...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR GCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCTCAAGAGTTCTTCCATaGCTTACCCATGGTATCACA +
Preference number: 2 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFSRVLP*LTHGIT
Trigger: TGTGATACCATGGGTAAGGCATGGAAGAACTCTTGA...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR CCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCATTCCCCCAACGCCACTaGGCAGAAAGCGGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPFPQRH*AESGLF
Trigger: AAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAA...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR TCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 2 (lower is better)
Translates to: LVENSDNLVPESAGPLGHIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR CCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTACAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATG +
Preference number: 2 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLQMSPS*PSLCLM
Trigger: CATGAGACAGAGTGATGGCCAGCTTGGGGACATTTG...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR TCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCAAAGCGAGATGCTTTTaGATTACATGTAGCAAAGAC +
Preference number: 2 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFKARCF*ITCSKD
Trigger: GTCTTTGCTACATGTAATTCAAAAGCATCTCGCTTT...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR GCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGTCCCACAGCTACTTCTaGCCTCACTTTTATCCTTGC +
Preference number: 2 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMSHSYF*PHFYPC
Trigger: GCAAGGATAAAAGTGAGGGCAGAAGTAGCTGTGGGA...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAACAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATG +
Preference number: 2 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQQMSPS*PSLCLM
Trigger: CATGAGACAGAGTGATGGCCAGCTTGGGGACATTTG...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR CCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGATACATCATAAGCCTTTaGTTCCTGAGAAAAGCGAGA +
Preference number: 2 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGYIISL*FLRKAR
Trigger: TCTCGCTTTTCTCAGGAACCAAAGGCTTATGATGTA...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 2 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR TCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGTTGCCACTCCAAATCTaGGGAGTTAACCCAAATGTG +
Preference number: 2 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLLPLQI*GVNPNV
Trigger: CACATTTGGGTTAACTCCTCAGATTTGGAGTGGCAA...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 2 (lower is better)
Translates to: FQGDSRALLYVRELVLFPIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR TCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGAGGGTGAAGGCTTCCTaGATGATGCATGTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRRVKAS*MMHVVS
Trigger: TGAAACCACATGCATCATTCAGGAAGCCTTCACCCT...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR CAA 90 bp CCCCATATCCATGTAATAAGCTGTGTTCTAATAGCACTCAGCAATTaGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGTTGTGT +
Preference number: 2 (lower is better)
Translates to: PHIHVISCVLIALSN*SGLDGNRDGPTLLC
Trigger: ACACAACAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAACACAGCTTATTACATGGATATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR CAA 90 bp GCAGACAAAACAGTGGAAACTACGGAAACGGTGGTCATTCAGCTTTaGGCTAAAGCATCGATTTTCAAATACAGCACTATGGCAACTAAC +
Preference number: 2 (lower is better)
Translates to: ADKTVETTETVVIQL*AKASIFKYSTMATN
Trigger: GTTAGTTGCCATAGTGCTGTATTTGAAAATCGATGCTTTAGCCAAAAGCTGAATGACCACCGTTTCCGTAGTTTCCACTGTTTTGTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR TCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 2 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAAGAGCTGGTGCTGGTGTaGTGTGCTCAGATTCTAAAT +
Preference number: 2 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEELVLV*CAQILN
Trigger: ATTTAGAATCTGAGCACATCACACCAGCACCAGCTC...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAACATACTGTGCAATCCTaGCATGCAGTGACCACAGAA +
Preference number: 2 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEHTVQS*HAVTTE
Trigger: TTCTGTGGTCACTGCATGTCAGGATTGCACAGTATG...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAAGATGCTACAGTCTGGTaGATCTGTGAAGTGCACCAT +
Preference number: 2 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEDATVW*ICEVHH
Trigger: ATGGTGCACTTCACAGATTCACCAGACTGTAGCATC...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR GCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTCACTTAATCAATCTCTaGCTTCCCAGCATTATCATA +
Preference number: 2 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCHLINL*LPSIII
Trigger: TATGATAATGCTGGGAAGGCAGAGATTGATTAAGTG...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR CCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGAAGTACCAGAATCAGCTaGCCCTTTGGGGCACATCAT +
Preference number: 2 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGSTRIS*PFGAHH
Trigger: ATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACT...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR CCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGTCATACAAATGGGTTaGCAACCCTGTTTCACGTCT +
Preference number: 2 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVVIQMG*QPCFTS
Trigger: AGACGTGAAACAGGGTTGCCAACCCATTTGTATGAC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR TCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAGTTGGTAGAAAACTCTaGCAATCTAGTACCAGAATC +
Preference number: 2 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKVGRKL*QSSTRI
Trigger: GATTCTGGTACTAGATTGTCAGAGTTTTCTACCAAC...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR GCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGATCCCACAGCTACTTCTaGCCTCACTTTTATCCTTGC +
Preference number: 2 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGSHSYF*PHFYPC
Trigger: GCAAGGATAAAAGTGAGGGCAGAAGTAGCTGTGGGA...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR GCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTACACTTAATCAATCTCTaGCTTCCCAGCATTATCATA +
Preference number: 2 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLHLINL*LPSIII
Trigger: TATGATAATGCTGGGAAGGCAGAGATTGATTAAGTG...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR TCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGTTGGTAGAAAACTCTaGCAATCTAGTACCAGAATC +
Preference number: 2 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVVGRKL*QSSTRI
Trigger: GATTCTGGTACTAGATTGTCAGAGTTTTCTACCAAC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR CAA 90 bp GTGCTGTGTCTCTCAGCATCACTGGAACTAGTTAATGGAGGGATATaGGAATTATTAGGTCTATTTCTGATTGTAATGTCTGTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: VLCLSASLELVNGGI*ELLGLFLIVMSVFQ
Trigger: CTGAAACACAGACATTACAATCAGAAATAGACCTAATAATTCCAATATCCCTCCATTAACTAGTTCCAGTGATGCTGAGAGACACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAACAGTTCATGTGTTTTTaGACCTGCTTTAATCTCTCC +
Preference number: 2 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEQFMCF*TCFNLS
Trigger: GGAGAGATTAAAGCAGGTTCAAAAACACATGAACTG...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR TCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATGGACTTAAATGCCTTTaGGGACTGAAAGATTTGGCA +
Preference number: 2 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHGLKCL*GLKDLA
Trigger: TGCCAAATCTTTCAGTCCTCAAAGGCATTTAAGTCC...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR CAA 90 bp ACATGGTATTGTGAAAATATGCTTGACAGTTCTAAGATGATTTCTTaGTCCTACATCATAAGCCTTTGGTTCCTGAGAAAAGCGAGATGC +
Preference number: 2 (lower is better)
Translates to: TWYCENMLDSSKMIS*SYIISLWFLRKARC
Trigger: GCATCTCGCTTTTCTCAGGAACCAAAGGCTTATGATGTAGGACAAAGAAATCATCTTAGAACTGTCAAGCATATTTTCACAATACCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR TCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATAGAAACAAGACAGGCTaGAGGATGAATTTGATTGAA +
Preference number: 2 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHRNKTG*RMNLIE
Trigger: TTCAATCAAATTCATCCTTCAGCCTGTCTTGTTTCT...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR TCA 72 bp GGAGAGGAAGATTTCTCAGCTCCTTCACGATTCCTGTaGCCTTTACAGAGCTGGAACAGAGACCTCTGCGAG +
Preference number: 3 (lower is better)
Translates to: GEEDFSAPSRFL*PLQSWNRDLCE
Trigger: CTCGCAGAGGTCTCTGTTCCAGCTCTGTAAAGGTCACAGGAATCGTGAAGGAGCTGAGAAATCTTCCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR TCA 72 bp TTCAACAGGGGAATCTCACTGATTATAAATGAAGGCTaGATTCCCCCAACGCCACTGGGCAGAAAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: FNRGISLIINEG*IPPTPLGRKRP
Trigger: AGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAATCAGTGAGATTCCCCTGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR CAA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAGGTTCATCTGGGTCCTaGACTTTGGTTGTCCTGATT +
Preference number: 3 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGGSSGS*TLVVLI
Trigger: AATCAGGACAACCAAAGTCAAGGACCCAGATGAACC...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR CAA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGATCTGGGTCCTTGACTTaGGTTGTCCTGATTGTGAAT +
Preference number: 3 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGSGSLT*VVLIVN
Trigger: ATTCACAATCAGGACAACCAAAGTCAAGGACCCAGA...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR GCA 72 bp ACAAGGCACAAAAAGTGTGGTATGAAGCCAAGGCTATaGTTCATTCAACCTCTCTCCTCTGGCTTGCTCAGT +
Preference number: 3 (lower is better)
Translates to: TRHKKCGMKPRL*FIQPLSSGLLS
Trigger: ACTGAGCAAGCCAGAGGAGAGAGGTTGAATGAAGCATAGCCTTGGCTTCATACCACACTTTTTGTGCCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR CAA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGAATCAGCTGGCCCTTaGGGGCACATCATTAAAAAC +
Preference number: 3 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAESAGP*GHIIKN
Trigger: GTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR-3UTR CAA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCGAATCAGCTGGCCCTTaGGGGCACATCATTAAAAAC +
Preference number: 3 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPESAGP*GHIIKN
Trigger: GTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTC...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR CAA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGCCCTCCTTGACGTTGTaGAAGTCATACAAATGGGTT +
Preference number: 3 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLPSLTL*KSYKWV
Trigger: AACCCATTTGTATGACTTCAACAACGTCAAGGAGGG...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR TCA 72 bp CTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTaGGGAGTTAACCCAAATGTGGATTCCAAGGAGATA +
Preference number: 3 (lower is better)
Translates to: LLPSLLSLPLQI*GVNPNVDSKEI
Trigger: TATCTCCTTGGAATCCACATTTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
3UTR TCA 72 bp TCACGGTACTACACACTAGTGACTAACGGCCAGGTCTaGTTTCCATCCCCTGTTACTTTTCGAAGAATTACA +
Preference number: 3 (lower is better)
Translates to: SRYYTLVTNGQV*FPSPVTFRRIT
Trigger: TGTAATTCTTCGAAAAGTAACAGGGGATGGAAATCAGACCTGGCCGTTAGTCACTAGTGTGTAGTACCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR GCA 72 bp ACAAGTTTTTACTCAATAGTGAATGCAGCTTTCCTCTaGACACCACCTCATGCCAACCAACTAGTGACTGGT +
Preference number: 3 (lower is better)
Translates to: TSFYSIVNAAFL*TPPHANQLVTG
Trigger: ACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGGAAAGCTGCATTCACTATTGAGTAAAAACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR CCA 72 bp GCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTaGCAACCCTGTTTCACGTCTAAAAGCCATTTTTAC +
Preference number: 3 (lower is better)
Translates to: ALLDVVEVIQMG*QPCFTSKSHFY
Trigger: GTAAAAATGGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR TCA 72 bp AAGAATTACAGTGTACAAGTTGCCATTTCAATGTCATaGATGACCCTGGAGTGGGGATGTCAGGAGTTCATG +
Preference number: 3 (lower is better)
Translates to: KNYSVQVAISMS*MTLEWGCQEFM
Trigger: CATGAACTCCTGACATCCCCACTCCAGGGTCATTCATGACATTGAAATGGCAACTTGTACACTGTAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR CAA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATGAATCAGCTGGCCCTTaGGGGCACATCATTAAAAAC +
Preference number: 3 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHESAGP*GHIIKN
Trigger: GTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTC...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR CAA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAATTTCAAGAGGGGTATTaGTGTTGTGACAGGCACATA +
Preference number: 3 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEFQEGY*CCDRHI
Trigger: TATGTGCCTGTCACAACACAAATACCCCTCTTGAAA...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR-3UTR CAA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGACATCACAGATGCCAGTaGGTAGAAAACTCTGACAAT +
Preference number: 3 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGHHRCQ*VENSDN
Trigger: ATTGTCAGAGTTTTCTACCAACTGGCATCTGTGATG...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR-3UTR CAA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATACCTCTGCGAGAACTTaGCCTTCAATACATCTGATA +
Preference number: 3 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHTSART*PSIHLI
Trigger: TATCAGATGTATTGAAGGCAAAGTTCTCGCAGAGGT...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR TCA 72 bp TTTACATTGATAATACAAGGCACAAAAAGTGTGGTATaGAGCCAAGGCTATGCTTCATTCAACCTCTCTCCT +
Preference number: 3 (lower is better)
Translates to: FTLIIQGTKSVV*SQGYASFNLSP
Trigger: AGGAGAGAGGTTGAATGAAGCATAGCCTTGGCTTCATACCACACTTTTTGTGCCTTGTATTATCAATGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR GCA 72 bp AAAAACCTATTTCAAAGCATGCACTTAATCAATCTCTaGCTTCCCAGCATTATCATAGCTCATCTTTTCCCA +
Preference number: 3 (lower is better)
Translates to: KNLFQSMHLINL*LPSIIIAHLFP
Trigger: TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGAAATAGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
3UTR TCA 72 bp ATGAGTAAATCTCTTTCAAGAGGGGTATTTGTGTTGTaGCAGGCACATATTACAATAGGACTAAATTTAGGT +
Preference number: 3 (lower is better)
Translates to: MSKSLSRGVFVL*QAHITIGLNLG
Trigger: ACCTAAATTTAGTCCTATTGTAATATGTGCCTGTCACAACACAAATACCCCTCTTGAAAGAGATTTACTCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR CCA 72 bp GGAGTGTATGTACCAATCAGACATGATTATGAAGAATaGGTAATTCTGAGTCTTTATTCCAATTTGGAAAAG +
Preference number: 3 (lower is better)
Translates to: GVYVPIRHDYEE*VILSLYSNLEK
Trigger: CTTTTCCAAATTGGAATAAAGACTCAGAATTACCCATTCTTCATAATCATGTCTGATTGGTACATACACTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGGCAGCCGCGGTCCCTaGCGCCCAGAAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANGSRGP*RPEAQP
Trigger: GGGCTGTGCTTCTGGGCGGCAGGGACCGCGGCTGCC...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
CDS-3UTR GCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATCCGCCGCTCTCCCCATaGTCCTCGCCGCGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANPPLSP*SSPRSG
Trigger: TCCGGAACGCGGCGAGGAGCATGGGGAGAGCGGCGG...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000420357.5
CDS-3UTR GCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGCCGCCGCTCTCCCCATaGTCCTCGCCGCGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKPPLSP*SSPRSG
Trigger: TCCGGAACGCGGCGAGGAGCATGGGGAGAGCGGCGG...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000420357.5
CDS-3UTR GCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCGGGGCTGCCGGTTACTaGACCACACGCGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVGAAGY*TTRGRT
Trigger: CGTTCTCCCGCGTGTGGTGCAGTAACCGGCAGCCCC...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACCCGCCGCTCTCCCCATaGTCCTCGCCGCGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHPPLSP*SSPRSG
Trigger: TCCGGAACGCGGCGAGGAGCATGGGGAGAGCGGCGG...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCGGGGGTGGTGCTGTaGACTCCCGGATCCGCAAAT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISGVVL*TPGSAN
Trigger: ATTTGCGGATCCGGGAGTGCACAGCACCACCCCCGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGCACAGTGCAGGGGCTaGCGGTTACTGCACCACACG +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPAQCRG*RLLHHT
Trigger: CGTGTGGTGCAGTAACCGGCAGCCCCTGCACTGTGC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCACCTCAGAGCCATCTaGCTGGAGGCTGGGTTCACC +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVHLRAI*LEAGFT
Trigger: GGTGAACCCAGCCTCCAGTCAGATGGCTCTGAGGTG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAGGCAGCCGCGGTCCCTaGCGCCCAGAAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLGSRGP*RPEAQP
Trigger: GGGCTGTGCTTCTGGGCGGCAGGGACCGCGGCTGCC...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
CDS-3UTR GCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCGGGGGTGGTGCTGTaGACTCCCGGATCCGCAAAT +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPSGVVL*TPGSAN
Trigger: ATTTGCGGATCCGGGAGTGCACAGCACCACCCCCGA...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAATCGGGGGTGGTGCTGTaGACTCCCGGATCCGCAAAT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKSGVVL*TPGSAN
Trigger: ATTTGCGGATCCGGGAGTGCACAGCACCACCCCCGA...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCGGGGCTGCCGGTTACTaGACCACACGCGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPGAAGY*TTRGRT
Trigger: CGTTCTCCCGCGTGTGGTGCAGTAACCGGCAGCCCC...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCGCACAGTGCAGGGGCTaGCGGTTACTGCACCACACG +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFAQCRG*RLLHHT
Trigger: CGTGTGGTGCAGTAACCGGCAGCCCCTGCACTGTGC...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGGCACAGTGCAGGGGCTaGCGGTTACTGCACCACACG +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKAQCRG*RLLHHT
Trigger: CGTGTGGTGCAGTAACCGGCAGCCCCTGCACTGTGC...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTAGGGACTCCCTCTGGTaGGCGGCAGTGCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIRDSLW*AAVQYN
Trigger: ATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCT...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAACAGTGTCCCAGGAGCTaGTGGGATGGATTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKQCPRS*WDGFGK
Trigger: CTTCCCGAATCCATCCCATCAGCTCCTGGGACACTG...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCAGTGTCCCAGGAGCTaGTGGGATGGATTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVQCPRS*WDGFGK
Trigger: CTTCCCGAATCCATCCCATCAGCTCCTGGGACACTG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTGGCTCCTCTATGAAATaGGGCAGTGTCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIGSSMK*GSVPGA
Trigger: AGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCC...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCGGACCTTCAAACCTaGGCTCTCGTCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKADLQT*ALVQSL
Trigger: GAGACTCTGGACGAGAGCTCAGGTTTGAAGGTCCGC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGCAGGTGTAATTTCCTaGGTCCGAGAGCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPAGVIS*VREPCL
Trigger: CAGGCACGGCTCTCGGACTCAGGAAATTACACCTGC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCTGGAGGACCACAGGTaGCTTCAGGACTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVLEDHR*LQDSGA
Trigger: TGCTCCTGAGTCCTGAAGTCACCTGTGGTCCTCCAG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGGGAAAGGGTCGGCGATaGGGGTCCCGAGTCGAATGG +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKGKGRR*GSRVEW
Trigger: CCATTCGACTCGGGACCCTCATCGCCGACCCTTTCC...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS-3UTR TCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTGCGAACATTGCAGGCTaGCCACTCTGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIANIAG*PLCPGR
Trigger: TCTTCCTGGACAGAGTGGTCAGCCTGCAATGTTCGC...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGTCGGGGGTGGTGCTGTaGACTCCCGGATCCGCAAAT +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKSGVVL*TPGSAN
Trigger: ATTTGCGGATCCGGGAGTGCACAGCACCACCCCCGA...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGACCAATGACCAGGACTaGAACGGCCACGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKTNDQD*NGHDGS
Trigger: GCTGCCGTCGTGGCCGTTGCAGTCCTGGTCATTGGT...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAATTGTCCAGAGGGTCCTaGAGACAGATGGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKLSRGS*RQMGPL
Trigger: CAGCGGACCCATCTGTCTGCAGGACCCTCTGGACAA...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTACCGCCACCTTCAGTTaGTTCACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPITATFS*FTAQSV
Trigger: CACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGT...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGCACAGTGCAGGGGCTaGCGGTTACTGCACCACACG +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWAQCRG*RLLHHT
Trigger: CGTGTGGTGCAGTAACCGGCAGCCCCTGCACTGTGC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGAGGAGCTGGGTTGGTaGAGGTCCGGGAACGTTTCT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKEELGW*RSGNVS
Trigger: AGAAACGTTCCCGGACCTGCACCAACCCAGCTCCTC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAACAGGAGCTGATGGGATaGATTCGGGAAGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKQELMG*IREGLR
Trigger: GCGAAGCCCTTCCCGAATCCATCCCATCAGCTCCTG...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGAGCAGGGACTCCCTCTaGTGGGCGGCAGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKSRDSL*WAAVQY
Trigger: GTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCT...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTCGTAGACCACAACAGTaGCCGACAGGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIRRPQQ*PTGFSS
Trigger: AGAGGAGAAGCCTGTCGGCCACTGTTGTGGTCTACG...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTCTGCACAGTGCGGGATaGTCAATGCAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPILHSAG*SMQREW
Trigger: CCACTCCCTTTGCATTGACCATCCCGCACTGTGCAG...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGGGTCCCGAGTCGAATaGGTCTCGGGAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKGSRVE*VSGVFR
Trigger: TCTGAAGACTCCCGAGACCCATTCGACTCGGGACCC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGGCTCCTCTATGAAATaGGGCAGTGTCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKGSSMK*GSVPGA
Trigger: AGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCGCTCCGAGCCGCCGCTaGATGGGCACCCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPAPSRR*MGTPRK
Trigger: CTTTCTCGGGGTGCCCATTCAGCGGCGGCTCGGAGC...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS-3UTR GCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGACCAATGACCAGGACTaGAACGGCCACGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKTNDQD*NGHDGS
Trigger: GCTGCCGTCGTGGCCGTTGCAGTCCTGGTCATTGGT...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTGTGCGGGATGGTCAATaGAAAGGGAGTGGTGACGAT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIVRDGQ*KGSGDD
Trigger: ATCGTCACCACTCCCTTTGCATTGACCATCCCGCAC...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCGGGGCTGCCGGTTACTaGACCACACGCGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGGAAGY*TTRGRT
Trigger: CGTTCTCCCGCGTGTGGTGCAGTAACCGGCAGCCCC...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACGCACAGTGCAGGGGCTaGCGGTTACTGCACCACACG +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHAQCRG*RLLHHT
Trigger: CGTGTGGTGCAGTAACCGGCAGCCCCTGCACTGTGC...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGAGACAGGGAGCTGGTaGTGGTGTGATGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKETGSW*WCDVLR
Trigger: TCTGAGCACATCACACCAGCACCAGCTCCCTGTCTC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCGAGACAGGGAGCTGGTaGTGGTGTGATGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVETGSW*WCDVLR
Trigger: TCTGAGCACATCACACCAGCACCAGCTCCCTGTCTC...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTGCCGCCAGCGCGGATaGCGGAGTCGCCCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSCRQRG*RSRPQS
Trigger: GGACTGCGGGCGACTCCGGCATCCGCGCTGGCGGCA...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGTCCGGGAACGTTTCTaGCATCCTCTACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKVRERF*HPLPQR
Trigger: TCGCTGTGGTAGAGGATGGCAGAAACGTTCCCGGAC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATCCCATTTCTCGGGGGTaGTGCTGTGCACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANPISRG*CCALPD
Trigger: ATCCGGGAGTGCACAGCACCACCCCCGAGAAATGGG...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISDLAA*QNSGAG
Trigger: CCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGGTCCTGCAGACAGATaGGTCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANGPADR*VRCMSG
Trigger: GCCGGACATACAGCGGACCCATCTGTCTGCAGGACC...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGGTCCTGCAGACAGATaGGTCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLGPADR*VRCMSG
Trigger: GCCGGACATACAGCGGACCCATCTGTCTGCAGGACC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCAGTGTCCCAGGAGCTaGTGGGATGGATTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLQCPRS*WDGFGK
Trigger: CTTCCCGAATCCATCCCATCAGCTCCTGGGACACTG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCCAGTGTCCCAGGAGCTaGTGGGATGGATTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPQCPRS*WDGFGK
Trigger: CTTCCCGAATCCATCCCATCAGCTCCTGGGACACTG...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAACATCTGGCTCCTCTATaGAATGAGGCAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKHLAPL*NEAVSQ
Trigger: CTGGGACACTGCCTCATTTCATAGAGGAGCCAGATG...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCGCGGACCTTCAAACCTaGGCTCTCGTCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPADLQT*ALVQSL
Trigger: GAGACTCTGGACGAGAGCTCAGGTTTGAAGGTCCGC...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAGCAGGTGTAATTTCCTaGGTCCGAGAGCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGAGVIS*VREPCL
Trigger: CAGGCACGGCTCTCGGACTCAGGAAATTACACCTGC...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGCAGGTGTAATTTCCTaGGTCCGAGAGCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWAGVIS*VREPCL
Trigger: CAGGCACGGCTCTCGGACTCAGGAAATTACACCTGC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCTCCCAGGGAAACCATaGACGAGCTCTGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVLPGKP*TSSGLS
Trigger: TGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCTGGAGGACCACAGGTaGCTTCAGGACTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLLEDHR*LQDSGA
Trigger: TGCTCCTGAGTCCTGAAGTCACCTGTGGTCCTCCAG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCAAAAGGCCCCACCATTaGGAGGAGCTGGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLKRPHH*EELGWC
Trigger: GCACCAACCCAGCTCCTCTCAATGGTGGGGCCTTTT...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGCACAGAGGCCTTCCTaGTCTTGGAGGTACCCAGGT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWAQRPS*SWRYPG
Trigger: ACCTGGGTACCTCCAAGAGCAGGAAGGCCTCTGTGC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCGCACAGAGGCCTTCCTaGTCTTGGAGGTACCCAGGT +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPAQRPS*SWRYPG
Trigger: ACCTGGGTACCTCCAAGAGCAGGAAGGCCTCTGTGC...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCTCTGGTGGGCGGCAGTaGAGTACAATCATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVSGGRQ*STIMPS
Trigger: TGAAGGCATGATTGTACTGCACTGCCGCCCACCAGA...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCTGGTGGGCGGCAGTaGAGTACAATCATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPSGGRQ*STIMPS
Trigger: TGAAGGCATGATTGTACTGCACTGCCGCCCACCAGA...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGTCCGAGAGCCGTGCCTaGCTGATGATCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKSESRA*LMIRLW
Trigger: CCATAACCTGATCATCAGGCAGGCACGGCTCTCGGA...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGGTTCACACTCTGGACTaGAGACGGACCATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKVHTLD*RRTIRS
Trigger: GGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAAC...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATACCAATGACCAGGACTaGAACGGCCACGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHTNDQD*NGHDGS
Trigger: GCTGCCGTCGTGGCCGTTGCAGTCCTGGTCATTGGT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATTTGTCCAGAGGGTCCTaGAGACAGATGGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANLSRGS*RQMGPL
Trigger: CAGCGGACCCATCTGTCTGCAGGACCCTCTGGACAA...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTCTGACATCTGCACAGTaGGGGATGGTCAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPILTSAQ*GMVNAK
Trigger: CTTTGCATTGACCATCCCGCACTGTGCAGATGTCAG...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGCACAGTGCAGGGGCTaGCGGTTACTGCACCACACG +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLAQCRG*RLLHHT
Trigger: CGTGTGGTGCAGTAACCGGCAGCCCCTGCACTGTGC...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCACTGCACACCACCTCATaGCAACCAACTAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPLHTTS*QPTSDW
Trigger: CCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAG...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAGAGGAGCTGGGTTGGTaGAGGTCCGGGAACGTTTCT +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGEELGW*RSGNVS
Trigger: AGAAACGTTCCCGGACCTGCACCAACCCAGCTCCTC...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCGAATATCTGCATGGCTaGCCTCGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVEYLHG*PRFAPE
Trigger: CTCAGGTGCAAAGCGAGGCCAGCCATGCAGATATTC...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATAGGGACTCCCTCTGGTaGGCGGCAGTGCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANRDSLW*AAVQYN
Trigger: ATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCAGCAGGGACTCCCTCTaGTGGGCGGCAGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGSRDSL*WAAVQY
Trigger: GTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCT...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGTCAGAGCCATCTGACTaGAGGCTGGGTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKSEPSD*RLGSPW
Trigger: CCAAGGTGAACCCAGCCTCCAGTCAGATGGCTCTGA...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGGTGACGATCATGTCTaGAGGACCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKGDDHV*RTTGDF
Trigger: GAAGTCACCTGTGGTCCTCCAGACATGATCGTCACC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCCTGCACAGTGCGGGATaGTCAATGCAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFLHSAG*SMQREW
Trigger: CCACTCCCTTTGCATTGACCATCCCGCACTGTGCAG...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTTCCCCCAACGCCACTaGGCAGAAAGCGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWFPQRH*AESGLF
Trigger: AAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTCAAAGGGTTAAAGAGTaGGGACTCTGTCATGAGCTC +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIQRVKE*GLCHEL
Trigger: GAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTG...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACCTGGAGGACCACAGGTaGCTTCAGGACTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHLEDHR*LQDSGA
Trigger: TGCTCCTGAGTCCTGAAGTCACCTGTGGTCCTCCAG...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGCTGTCCAGGAGCACATaGCACGCAAAGGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWLSRST*HAKGSK
Trigger: TTTGGACCCCTTTGCGTGTCATGTGCTCCTGGACAG...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAATGGAGTAGGGAATTTTaGAGGCTTTGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKWSREF*RLWGQS
Trigger: AGACTGGCCCCAAAGCCTTCAAAATTCCCTACTCCA...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACAAAAGGCCCCACCATTaGGAGGAGCTGGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHKRPHH*EELGWC
Trigger: GCACCAACCCAGCTCCTCTCAATGGTGGGGCCTTTT...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTCCGAGAGCCGTGCCTaGCTGATGATCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLSESRA*LMIRLW
Trigger: CCATAACCTGATCATCAGGCAGGCACGGCTCTCGGA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGTTCACACTCTGGACTaGAGACGGACCATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWVHTLD*RRTIRS
Trigger: GGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAAC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVTVRSG*MAEFRS
Trigger: GCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGT...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKTVRSG*MAEFRS
Trigger: GCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGT...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTTGTCCAGAGGGTCCTaGAGACAGATGGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHLSRGS*RQMGPL
Trigger: CAGCGGACCCATCTGTCTGCAGGACCCTCTGGACAA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGACCGCCACCTTCAGTTaGTTCACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKTATFS*FTAQSV
Trigger: CACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGT...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTGGGGCTGCCGGTTACTaGACCACACGCGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPGAAGY*TTRGRT
Trigger: CGTTCTCCCGCGTGTGGTGCAGTAACCGGCAGCCCC...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAATCTGTGCAGGGAAAGTaGTGTCCTCTTGTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKSVQGK*CPLVRR
Trigger: TCTTCGCACAAGAGGACAGCACTTTCCCTGCACAGA...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTTTGGGGCCAGTCTGTaGAGGGAAAGTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLFGASL*RESAVL
Trigger: GAGGACAGCACTTTCCCTGCACAGACTGGCCCCAAA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAACATCTGCCAGTCCTTaGCTTTGGCATTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKTSASP*LWHWGY
Trigger: ATACCCCCAATGCCAAAGGCAAGGACTGGCAGATGT...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCGAGACAGGGAGCTGGTaGTGGTGTGATGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPETGSW*WCDVLR
Trigger: TCTGAGCACATCACACCAGCACCAGCTCCCTGTCTC...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCATACCTGGCACAGGGTaGTGTGTCTCTCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFIPGTG*CVSQHH
Trigger: GTGATGCTGAGAGACACAGCACCCTGTGCCAGGTAT...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATCAGGAGCTGATGGGATaGATTCGGGAAGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHQELMG*IREGLR
Trigger: GCGAAGCCCTTCCCGAATCCATCCCATCAGCTCCTG...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGGAATATCTGCATGGCTaGCCTCGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKEYLHG*PRFAPE
Trigger: CTCAGGTGCAAAGCGAGGCCAGCCATGCAGATATTC...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCAGCAGGGACTCCCTCTaGTGGGCGGCAGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKASRDSL*WAAVQY
Trigger: GTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGCGTAGACCACAACAGTaGCCGACAGGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKRRPQQ*PTGFSS
Trigger: AGAGGAGAAGCCTGTCGGCCACTGTTGTGGTCTACG...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTCAAATGTTCACACTCTaGACTGCAGACGGACCATTC +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIQMFTL*TADGPF
Trigger: GAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTG...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCCATTTCTCGGGGGTaGTGCTGTGCACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGPISRG*CCALPD
Trigger: ATCCGGGAGTGCACAGCACCACCCCCGAGAAATGGG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKSDLAA*QNSGAG
Trigger: CCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGA...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVAHCQI*LHGRIQ
Trigger: CTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGC...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCAAGAATTCTCCTCTaGGATGGCACCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVPRILL*DGTVWY
Trigger: ATACCACACGGTGCCATCCCAGAGGAGAATTCTTGG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTCAGAGCCATCTGACTaGAGGCTGGGTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKSEPSD*RLGSPW
Trigger: CCAAGGTGAACCCAGCCTCCAGTCAGATGGCTCTGA...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGGGTGACGATCATGTCTaGAGGACCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKGDDHV*RTTGDF
Trigger: GAAGTCACCTGTGGTCCTCCAGACATGATCGTCACC...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCTCATGGGAGGAAGTaGACTAGAGTCCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISHGRK*TRVHFA
Trigger: GGCAAAATGGACTCTAGTCCACTTCCTCCCATGAGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTTCCCCCAACGCCACTaGGCAGAAAGCGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHFPQRH*AESGLF
Trigger: AAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACGGCTCCTCTATGAAATaGGGCAGTGTCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHGSSMK*GSVPGA
Trigger: AGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCC...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGCATCTGGCTCCTCTATaGAATGAGGCAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKHLAPL*NEAVSQ
Trigger: CTGGGACACTGCCTCATTTCATAGAGGAGCCAGATG...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAACTCGCCGTTGCATTTaGAGAATATCTGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPTRRCI*RISAWL
Trigger: CAGCCATGCAGATATTCTTCAAATGCAACGGCGAGT...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGCGGACCTTCAAACCTaGGCTCTCGTCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLADLQT*ALVQSL
Trigger: GAGACTCTGGACGAGAGCTCAGGTTTGAAGGTCCGC...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCTCCCAGGGAAACCATaGACGAGCTCTGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLLPGKP*TSSGLS
Trigger: TGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGGAAAAGTCCTGGAATaGTTCTTGCCGTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPGKVLE*FLPWYS
Trigger: TGAGTACCACGGCAAGAATCATTCCAGGACTTTTCC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTGGCACCGTGTGGTATaGGTAAGCTCACCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWWHRVV*VSSPLY
Trigger: ATACAGGGGTGAGCTTACTCATACCACACGGTGCCA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCACCTCAGAGCCATCTaGCTGGAGGCTGGGTTCACC +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLHLRAI*LEAGFT
Trigger: GGTGAACCCAGCCTCCAGTCAGATGGCTCTGAGGTG...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTACACCTCAGAGCCATCTaGCTGGAGGCTGGGTTCACC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLHLRAI*LEAGFT
Trigger: GGTGAACCCAGCCTCCAGTCAGATGGCTCTGAGGTG...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCTGGAGGACCACAGGTaGCTTCAGGACTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGLEDHR*LQDSGA
Trigger: TGCTCCTGAGTCCTGAAGTCACCTGTGGTCCTCCAG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGATGCAAAGGGAGTGGTaGCGATCATGTCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWMQREW*RSCLED
Trigger: GTCCTCCAGACATGATCGTCACCACTCCCTTTGCAT...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTCCAATGCTCAGAACTaGCATCTGCACAGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWSNAQN*HLHSAG
Trigger: TCCCGCACTGTGCAGATGTCAGTTCTGAGCATTGGA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGAGGAGCTGTCCACCTTaGTGCCTTTCATCTGAAACC +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKRSCPP*CLSSET
Trigger: GGTTTCAGATGAAAGGCATCAAGGTGGACAGCTCCT...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCTCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAATTTGCCTGCTGTAGTTaGAGTCGGCTTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKFACCS*SRLHQA
Trigger: AGCTTGATGAAGCCGACTTCAACTACAGCAGGCAAA...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTTGCCACTCCAAATCTaGGGAGTTAACCCAAATGTG +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPILPLQI*GVNPNV
Trigger: CACATTTGGGTTAACTCCTCAGATTTGGAGTGGCAA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCATACTGTGCAATCCTaGCATGCAGTGACCACAGAA +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVHTVQS*HAVTTE
Trigger: TTCTGTGGTCACTGCATGTCAGGATTGCACAGTATG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAAGCAGGGAGTTACCTTaGCGGACTGTTTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPSRELP*RTVLKL
Trigger: CAACTTCAAAACAGTCCGTCAAGGTAACTCCCTGCT...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTCTGGTGGGCGGCAGTaGAGTACAATCATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLSGGRQ*STIMPS
Trigger: TGAAGGCATGATTGTACTGCACTGCCGCCCACCAGA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTCCGAGAGCCGTGCCTaGCTGATGATCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHSESRA*LMIRLW
Trigger: CCATAACCTGATCATCAGGCAGGCACGGCTCTCGGA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGACCTTCACAGAATTTaGCCCCATTTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWDLHRI*PHFSGV
Trigger: CACCCCCGAGAAATGGGGGCAAATTCTGTGAAGGTC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCCTGGAATGATTCTTaGCGTGGTACTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPSWNDS*RGTQLS
Trigger: AGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGA...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCTCCTGGAATGATTCTTaGCGTGGTACTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVSWNDS*RGTQLS
Trigger: AGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGA...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGTGCGGGATGGTCAATaGAAAGGGAGTGGTGACGAT +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLVRDGQ*KGSGDD
Trigger: ATCGTCACCACTCCCTTTGCATTGACCATCCCGCAC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCGTGCGGGATGGTCAATaGAAAGGGAGTGGTGACGAT +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPVRDGQ*KGSGDD
Trigger: ATCGTCACCACTCCCTTTGCATTGACCATCCCGCAC...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCCTCAGAACTGACATCTaGACAGTGCGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFLRTDI*TVRDGQ
Trigger: TTGACCATCCCGCACTGTGCAGATGTCAGTTCTGAG...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGGGAGTTACAGGACATaGAGCCAAAAACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWGSYRT*SQKPPP
Trigger: AGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGGGAGTTACAGGACATaGAGCCAAAAACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANGSYRT*SQKPPP
Trigger: AGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCC...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGGGGAGTTACAGGACATaGAGCCAAAAACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKGSYRT*SQKPPP
Trigger: AGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCC...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACGAGACAGGGAGCTGGTaGTGGTGTGATGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHETGSW*WCDVLR
Trigger: TCTGAGCACATCACACCAGCACCAGCTCCCTGTCTC...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCTACCACAGCGAACATTaGAGGCTGACCACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPYHSEH*RLTTLS
Trigger: GGACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTA...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACGTCCGGGAACGTTTCTaGCATCCTCTACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHVRERF*HPLPQR
Trigger: TCGCTGTGGTAGAGGATGGCAGAAACGTTCCCGGAC...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCGAGGAGCTGGGTTGGTaGAGGTCCGGGAACGTTTCT +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGEELGW*RSGNVS
Trigger: AGAAACGTTCCCGGACCTGCACCAACCCAGCTCCTC...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTCAATCATGCCTTCAATaGGAACTTCCCTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIQSCLQ*ELPFLV
Trigger: CACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTG...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCAGGGACTCCCTCTaGTGGGCGGCAGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQSRDSL*WAAVQY
Trigger: GTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCT...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCTGATGATCAGGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVLMIRL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACCTGATCATCAG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCATTTCTCGGGGGTaGTGCTGTGCACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLPISRG*CCALPD
Trigger: ATCCGGGAGTGCACAGCACCACCCCCGAGAAATGGG...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCGGTCCTGCAGACAGATaGGTCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPGPADR*VRCMSG
Trigger: GCCGGACATACAGCGGACCCATCTGTCTGCAGGACC...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTCAGAGCCATCTGACTaGAGGCTGGGTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHSEPSD*RLGSPW
Trigger: CCAAGGTGAACCCAGCCTCCAGTCAGATGGCTCTGA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGGTGACGATCATGTCTaGAGGACCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLGDDHV*RTTGDF
Trigger: GAAGTCACCTGTGGTCCTCCAGACATGATCGTCACC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTATTGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIIDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCAAT...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKQMSPS*PSLCLM
Trigger: CATGAGACAGAGTGATGGCCAGCTTGGGGACATTTG...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATACAGGGAGCTGGTGCTaGTGTGATGTGCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANTGSWC*CDVLRF
Trigger: GAATCTGAGCACATCACACCAGCACCAGCTCCCTGT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGATATCTTTGGGTCAGATaGAGGGCGGGTGCTAGGACA +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGYLWVR*RAGART
Trigger: TGTCCTAGCACCCGCCCTCCATCTGACCCAAAGATA...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGCTCCTCTATGAAATaGGGCAGTGTCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLGSSMK*GSVPGA
Trigger: AGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCC...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGGCGGACCTTCAAACCTaGGCTCTCGTCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLADLQT*ALVQSL
Trigger: GAGACTCTGGACGAGAGCTCAGGTTTGAAGGTCCGC...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGGCGGACCTTCAAACCTaGGCTCTCGTCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMADLQT*ALVQSL
Trigger: GAGACTCTGGACGAGAGCTCAGGTTTGAAGGTCCGC...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAGCAGGTGTAATTTCCTaGGTCCGAGAGCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQAGVIS*VREPCL
Trigger: CAGGCACGGCTCTCGGACTCAGGAAATTACACCTGC...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGATGCAGAAGAGTCAATaGCGTCCACGCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWMQKSQ*RPRHSH
Trigger: GTGACTATGGCGTGGACGTCATTGACTCTTCTGCAT...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATCTCCCAGGGAAACCATaGACGAGCTCTGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHLPGKP*TSSGLS
Trigger: TGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAG...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCTGGGTTCACCTTGGTTaGTGGACATATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVWVHLG*WTYKSP
Trigger: GGGAGATTTATATGTCCATCAACCAAGGTGAACCCA...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATGGGTTCACCTTGGTTaGTGGACATATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPWVHLG*WTYKSP
Trigger: GGGAGATTTATATGTCCATCAACCAAGGTGAACCCA...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTCCAATGCTCAGAACTaGCATCTGCACAGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHSNAQN*HLHSAG
Trigger: TCCCGCACTGTGCAGATGTCAGTTCTGAGCATTGGA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTCTGTCCAGGAGCACATaGCACGCAAAGGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCLSRST*HAKGSK
Trigger: TTTGGACCCCTTTGCGTGTCATGTGCTCCTGGACAG...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCTGTCCAGGAGCACATaGCACGCAAAGGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGLSRST*HAKGSK
Trigger: TTTGGACCCCTTTGCGTGTCATGTGCTCCTGGACAG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAACTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKLVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATTGCCACTCCAAATCTaGGGAGTTAACCCAAATGTG +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPLPLQI*GVNPNV
Trigger: CACATTTGGGTTAACTCCTCAGATTTGGAGTGGCAA...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCCATACTGTGCAATCCTaGCATGCAGTGACCACAGAA +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFHTVQS*HAVTTE
Trigger: TTCTGTGGTCACTGCATGTCAGGATTGCACAGTATG...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCTTCATGAGGAAACAATaGCAATGGGCCACAGACAGT +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVFMRKQ*QWATDS
Trigger: ACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAA...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTGCGAACATTGCAGGCTaGCCACTCTGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCANIAG*PLCPGR
Trigger: TCTTCCTGGACAGAGTGGTCAGCCTGCAATGTTCGC...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCGCTTTGCACCTGAGTaGAATAGGGTTGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKRFAPE*NRVALD
Trigger: ATCAAGAGCAACCCTATTGCACTCAGGTGCAAAGCG...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTCCGTAAATAGGCTATaGGCACAGAGGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHSVNRL*AQRPSC
Trigger: GCAGGAAGGCCTCTGTGCGCATAGCCTATTTACGGA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATCGGGGGTGGTGCTGTaGACTCCCGGATCCGCAAAT +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQSGVVL*TPGSAN
Trigger: ATTTGCGGATCCGGGAGTGCACAGCACCACCCCCGA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACCAATGACCAGGACTaGAACGGCCACGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKTNDQD*NGHDGS
Trigger: GCTGCCGTCGTGGCCGTTGCAGTCCTGGTCATTGGT...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPTVRSG*MAEFRS
Trigger: GCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGT...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCTTGTCCAGAGGGTCCTaGAGACAGATGGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKALSRGS*RQMGPL
Trigger: CAGCGGACCCATCTGTCTGCAGGACCCTCTGGACAA...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACGTGCGGGATGGTCAATaGAAAGGGAGTGGTGACGAT +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHVRDGQ*KGSGDD
Trigger: ATCGTCACCACTCCCTTTGCATTGACCATCCCGCAC...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGTGCGGGATGGTCAATaGAAAGGGAGTGGTGACGAT +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHVRDGQ*KGSGDD
Trigger: ATCGTCACCACTCCCTTTGCATTGACCATCCCGCAC...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCTCAGAACTGACATCTaGACAGTGCGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLLRTDI*TVRDGQ
Trigger: TTGACCATCCCGCACTGTGCAGATGTCAGTTCTGAG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAAACCACTTCCTGAAATaGACAAGGGGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKNHFLK*TRGIVH
Trigger: GTGGACAATACCCCTTGTGCATTTCAGGAAGTGGTT...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAAACCACTTCCTGAAATaGACAAGGGGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPNHFLK*TRGIVH
Trigger: GTGGACAATACCCCTTGTGCATTTCAGGAAGTGGTT...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCAACCACTTCCTGAAATaGACAAGGGGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVNHFLK*TRGIVH
Trigger: GTGGACAATACCCCTTGTGCATTTCAGGAAGTGGTT...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGGGGCTGCCGGTTACTaGACCACACGCGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMGAAGY*TTRGRT
Trigger: CGTTCTCCCGCGTGTGGTGCAGTAACCGGCAGCCCC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCTAGGATTGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISRIDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCAATCCTAGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATTCTGTGCAGGGAAAGTaGTGTCCTCTTGTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANSVQGK*CPLVRR
Trigger: TCTTCGCACAAGAGGACAGCACTTTCCCTGCACAGA...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCTTTGGGGCCAGTCTGTaGAGGGAAAGTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGFGASL*RESAVL
Trigger: GAGGACAGCACTTTCCCTGCACAGACTGGCCCCAAA...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGACATCTGCCAGTCCTTaGCTTTGGCATTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKTSASP*LWHWGY
Trigger: ATACCCCCAATGCCAAAGGCAAGGACTGGCAGATGT...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTTACTCAATAGTGAATaGAGCTTTCCTCTGCACACC +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPILLNSE*SFPLHT
Trigger: GGTGTGCAGAGGAAAGCTGCATTCACTATTGAGTAA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATATACCTGGCACAGGGTaGTGTGTCTCTCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHIPGTG*CVSQHH
Trigger: GTGATGCTGAGAGACACAGCACCCTGTGCCAGGTAT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGAGGGACTCCCTCTGGTaGGCGGCAGTGCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLRDSLW*AAVQYN
Trigger: ATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCT...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCAGGGACTCCCTCTGGTaGGCGGCAGTGCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPRDSLW*AAVQYN
Trigger: ATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCT...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAAGCAGGGACTCCCTCTaGTGGGCGGCAGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPSRDSL*WAAVQY
Trigger: GTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCT...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCCTGATGATCAGGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFLMIRL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACCTGATCATCAG...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHSDLAA*QNSGAG
Trigger: CCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLAHCQI*LHGRIQ
Trigger: CTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCACCATGAACGAGCTCTaGACTTTCACTTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVTMNEL*TFTLMS
Trigger: GGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGT...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTCAGAGCCATCTGACTaGAGGCTGGGTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCSEPSD*RLGSPW
Trigger: CCAAGGTGAACCCAGCCTCCAGTCAGATGGCTCTGA...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAACTGGCAGGCAGTGAATaGTTTAATTCTCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKLAGSE*FNSPEE
Trigger: TTCCTCTGGAGAATTAAACCATTCACTGCCTGCCAG...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGAGAACGGGACTTCCTaGCAGGCAGTGAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLENGTS*QAVNGL
Trigger: TAAACCATTCACTGCCTGCCAGGAAGTCCCGTTCTC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGGAGAACGGGACTTCCTaGCAGGCAGTGAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKENGTS*QAVNGL
Trigger: TAAACCATTCACTGCCTGCCAGGAAGTCCCGTTCTC...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAATTCCCCCAACGCCACTaGGCAGAAAGCGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQFPQRH*AESGLF
Trigger: AAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAA...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGTTCCCCCAACGCCACTaGGCAGAAAGCGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLFPQRH*AESGLF
Trigger: AAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAA...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCAGTACCAGAATCAGCTaGCCCTTTGGGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLSTRIS*PFGAHH
Trigger: ATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACT...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGTCATACAAATGGGTTaGCAACCCTGTTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKVIQMG*QPCFTS
Trigger: AGACGTGAAACAGGGTTGCCAACCCATTTGTATGAC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCCTCCACCACACCTTaGTCTGTAAATCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISSTTP*SVNLTN
Trigger: ATTTGTGAGATTTACAGACCAAGGTGTGGTGGAGGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCAAATACAGCACTATaGCAACTAACACCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISNTAL*QLTPKA
Trigger: CGCCTTTGGTGTTAGTTGCCATAGTGCTGTATTTGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGACGAGCCGCCGCTGAATaGGCACCCCGAGAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGRAAAE*APRERA
Trigger: CGCCCTTTCTCGGGGTGCCCATTCAGCGGCGGCTCG...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS-3UTR CCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATTGAAGTTGAAGGTCTaGAAGCCACCTGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPLKLKV*KPPVNA
Trigger: TGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAA...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCATCTGGCTCCTCTATaGAATGAGGCAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGHLAPL*NEAVSQ
Trigger: CTGGGACACTGCCTCATTTCATAGAGGAGCCAGATG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCTGGCACCGTGTGGTATaGGTAAGCTCACCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGWHRVV*VSSPLY
Trigger: ATACAGGGGTGAGCTTACTCATACCACACGGTGCCA...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCACCTCAGAGCCATCTaGCTGGAGGCTGGGTTCACC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIHLRAI*LEAGFT
Trigger: GGTGAACCCAGCCTCCAGTCAGATGGCTCTGAGGTG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTCACCTCAGAGCCATCTaGCTGGAGGCTGGGTTCACC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSHLRAI*LEAGFT
Trigger: GGTGAACCCAGCCTCCAGTCAGATGGCTCTGAGGTG...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTCACCTCAGAGCCATCTaGCTGGAGGCTGGGTTCACC +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVHLRAI*LEAGFT
Trigger: GGTGAACCCAGCCTCCAGTCAGATGGCTCTGAGGTG...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGATGCAAAGGGAGTGGTaGCGATCATGTCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLMQREW*RSCLED
Trigger: GTCCTCCAGACATGATCGTCACCACTCCCTTTGCAT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCCTGTCCAGGAGCACATaGCACGCAAAGGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKALSRST*HAKGSK
Trigger: TTTGGACCCCTTTGCGTGTCATGTGCTCCTGGACAG...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCTGTCCAGGAGCACATaGCACGCAAAGGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLLSRST*HAKGSK
Trigger: TTTGGACCCCTTTGCGTGTCATGTGCTCCTGGACAG...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATAGGAGCTGTCCACCTTaGTGCCTTTCATCTGAAACC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHRSCPP*CLSSET
Trigger: GGTTTCAGATGAAAGGCATCAAGGTGGACAGCTCCT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGATCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCCCCACAGGTTCAAAATaGCAGCAGATGGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPPTGSK*QQMGYF
Trigger: AAAGTAGCCCATCTGCTGTCATTTTGAACCTGTGGG...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTTTGCCTGCTGTAGTTaGAGTCGGCTTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWFACCS*SRLHQA
Trigger: AGCTTGATGAAGCCGACTTCAACTACAGCAGGCAAA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGAGCTGGTGCTGGTGTaGTGTGCTCAGATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWELVLV*CAQILN
Trigger: ATTTAGAATCTGAGCACATCACACCAGCACCAGCTC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGAGGGTGAAGGCTTCCTaGATGATGCATGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKRVKAS*MMHVVS
Trigger: TGAAACCACATGCATCATTCAGGAAGCCTTCACCCT...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATCATACTGTGCAATCCTaGCATGCAGTGACCACAGAA +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANHTVQS*HAVTTE
Trigger: TTCTGTGGTCACTGCATGTCAGGATTGCACAGTATG...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTTTCAATGTCATGAATaGCCCTGGAGTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLFQCHE*PWSGDV
Trigger: GACATCCCCACTCCAGGGTCATTCATGACATTGAAA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCGCGAACATTGCAGGCTaGCCACTCTGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPANIAG*PLCPGR
Trigger: TCTTCCTGGACAGAGTGGTCAGCCTGCAATGTTCGC...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATAGCAGGGAGTTACCTTaGCGGACTGTTTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANSRELP*RTVLKL
Trigger: CAACTTCAAAACAGTCCGTCAAGGTAACTCCCTGCT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGCGCTTTGCACCTGAGTaGAATAGGGTTGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWRFAPE*NRVALD
Trigger: ATCAAGAGCAACCCTATTGCACTCAGGTGCAAAGCG...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAAAGTCCTCCACCTGTTaGCTAGTAACATTGATGAAC +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKKSSTC*LVTLMN
Trigger: GTTCATCAATGTTACTAGGCAACAGGTGGAGGACTT...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAGCACAGAGGCCTTCCTaGTCTTGGAGGTACCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQAQRPS*SWRYPG
Trigger: ACCTGGGTACCTCCAAGAGCAGGAAGGCCTCTGTGC...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTCCGTAAATAGGCTATaGGCACAGAGGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLSVNRL*AQRPSC
Trigger: GCAGGAAGGCCTCTGTGCGCATAGCCTATTTACGGA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGGTTCACACTCTGGACTaGAGACGGACCATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMVHTLD*RRTIRS
Trigger: GGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAAC...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAACCAATGACCAGGACTaGAACGGCCACGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPTNDQD*NGHDGS
Trigger: GCTGCCGTCGTGGCCGTTGCAGTCCTGGTCATTGGT...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATTGTCCAGAGGGTCCTaGAGACAGATGGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQLSRGS*RQMGPL
Trigger: CAGCGGACCCATCTGTCTGCAGGACCCTCTGGACAA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATTCCTGGAATGATTCTTaGCGTGGTACTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANSWNDS*RGTQLS
Trigger: AGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGA...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGACCGCCACCTTCAGTTaGTTCACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLTATFS*FTAQSV
Trigger: CACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGT...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCACCGCCACCTTCAGTTaGTTCACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKATATFS*FTAQSV
Trigger: CACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAACCGCCACCTTCAGTTaGTTCACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQTATFS*FTAQSV
Trigger: CACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKSWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGAGTGCTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKSAVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGCACT...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTATTTGGGGCCAGTCTGTaGAGGGAAAGTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLFGASL*RESAVL
Trigger: GAGGACAGCACTTTCCCTGCACAGACTGGCCCCAAA...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATACATCTGCCAGTCCTTaGCTTTGGCATTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHTSASP*LWHWGY
Trigger: ATACCCCCAATGCCAAAGGCAAGGACTGGCAGATGT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTCCCACAGCTACTTCTaGCCTCACTTTTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWSHSYF*PHFYPC
Trigger: GCAAGGATAAAAGTGAGGGCAGAAGTAGCTGTGGGA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGATCCCACAGCTACTTCTaGCCTCACTTTTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGSHSYF*PHFYPC
Trigger: GCAAGGATAAAAGTGAGGGCAGAAGTAGCTGTGGGA...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTAAGTTTAAATGTTACTaGCTTAGGTCCACCTCACGA +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIKFKCY*LRSTSR
Trigger: TCGTGAGGTGGACCTAAGGCAGTAACATTTAAACTT...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGTCTCAATGCCTAGGATaGAAAGACCATCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKSQCLG*KDHLCS
Trigger: ACTGCACAGATGGTCTTTGCATCCTAGGCATTGAGA...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420357.5
CDS-3UTR CCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAGGTTATGGTCAGCCCTaGTGTCAATGTTCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGGYGQP*CQCSRL
Trigger: AAGACGAGAACATTGACACCAGGGCTGACCATAACC...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGCTGATGATCAGGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKLMIRL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACCTGATCATCAG...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATCAAATGTTCACACTCTaGACTGCAGACGGACCATTC +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANQMFTL*TADGPF
Trigger: GAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTG...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCAAATGTTCACACTCTaGACTGCAGACGGACCATTC +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLQMFTL*TADGPF
Trigger: GAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACCCATTTCTCGGGGGTaGTGCTGTGCACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPPISRG*CCALPD
Trigger: ATCCGGGAGTGCACAGCACCACCCCCGAGAAATGGG...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTCAGTTTTCAGATTCCTaGCTTAGACCTTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIQFSDS*LRPSQN
Trigger: ATTCTGTGAAGGTCTAAGCCAGGAATCTGAAAACTG...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLSDLAA*QNSGAG
Trigger: CCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGGTCCTGCAGACAGATaGGTCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVGPADR*VRCMSG
Trigger: GCCGGACATACAGCGGACCCATCTGTCTGCAGGACC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCCATGGGGAAAAGTCCTaGAATGATTCTTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPHGEKS*NDSCRG
Trigger: ACCACGGCAAGAATCATTCCAGGACTTTTCCCCATG...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCATGGGGAAAAGTCCTaGAATGATTCTTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLHGEKS*NDSCRG
Trigger: ACCACGGCAAGAATCATTCCAGGACTTTTCCCCATG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGTCAGAGCCATCTGACTaGAGGCTGGGTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLSEPSD*RLGSPW
Trigger: CCAAGGTGAACCCAGCCTCCAGTCAGATGGCTCTGA...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGCTGCACAGTGCGGGATaGTCAATGCAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMLHSAG*SMQREW
Trigger: CCACTCCCTTTGCATTGACCATCCCGCACTGTGCAG...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCAGGCAGTGAATaGTTTAATTCTCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKLAGSE*FNSPEE
Trigger: TTCCTCTGGAGAATTAAACCATTCACTGCCTGCCAG...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGATTGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKIDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCAAT...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGCCAGTCCTTGCCTTTaGCATTGGGGGTATCAAATG +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHASPCL*HWGYQM
Trigger: CATTTGATACCCCCAATGCCAAAGGCAAGGACTGGC...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCACAAAATGACAGCAGATaGGCTACTTTGTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPQNDSR*ATLCSE
Trigger: TTCGCTACACAAAGTAGCCCATCTGCTGTCATTTTG...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAATCGGCTTCATCAAGCTaGGATTCTGAAATGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKSASSS*DSEMFE
Trigger: CTCAAACATTTCAGAATCCCAGCTTGATGAAGCCGA...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATTCTCATGGGAGGAAGTaGACTAGAGTCCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANSHGRK*TRVHFA
Trigger: GGCAAAATGGACTCTAGTCCACTTCCTCCCATGAGA...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTTTCCCCCAACGCCACTaGGCAGAAAGCGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPFPQRH*AESGLF
Trigger: AAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAA...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGGTCATACAAATGGGTTaGCAACCCTGTTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKVIQMG*QPCFTS
Trigger: AGACGTGAAACAGGGTTGCCAACCCATTTGTATGAC...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCACAGGGAGCTGGTGCTaGTGTGATGTGCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGTGSWC*CDVLRF
Trigger: GAATCTGAGCACATCACACCAGCACCAGCTCCCTGT...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTACAGGGAGCTGGTGCTaGTGTGATGTGCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCTGSWC*CDVLRF
Trigger: GAATCTGAGCACATCACACCAGCACCAGCTCCCTGT...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCCATGCCTTACCCATaGTATCACAAATTCAACTCA +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISMPYP*YHKFNS
Trigger: TGAGTTGAATTTGTGATACCATGGGTAAGGCATGGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGATGCAGACAAAACAGTaGAAACTACGGAAACGGTGG +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKMQTKQ*KLRKRW
Trigger: CCACCGTTTCCGTAGTTTCCACTGTTTTGTCTGCAT...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCATGCAGACAAAACAGTaGAAACTACGGAAACGGTGG +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFMQTKQ*KLRKRW
Trigger: CCACCGTTTCCGTAGTTTCCACTGTTTTGTCTGCAT...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTATCTTTGGGTCAGATaGAGGGCGGGTGCTAGGACA +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLYLWVR*RAGART
Trigger: TGTCCTAGCACCCGCCCTCCATCTGACCCAAAGATA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACAGTGTCCCAGGAGCTaGTGGGATGGATTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKQCPRS*WDGFGK
Trigger: CTTCCCGAATCCATCCCATCAGCTCCTGGGACACTG...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCCATCTGGCTCCTCTATaGAATGAGGCAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPHLAPL*NEAVSQ
Trigger: CTGGGACACTGCCTCATTTCATAGAGGAGCCAGATG...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATACTCGCCGTTGCATTTaGAGAATATCTGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHTRRCI*RISAWL
Trigger: CAGCCATGCAGATATTCTTCAAATGCAACGGCGAGT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTACTCCCAGGGAAACCATaGACGAGCTCTGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLLPGKP*TSSGLS
Trigger: TGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAG...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCCTCCCAGGGAAACCATaGACGAGCTCTGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKALPGKP*TSSGLS
Trigger: TGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAG...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGAAAAGTCCTGGAATaGTTCTTGCCGTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHGKVLE*FLPWYS
Trigger: TGAGTACCACGGCAAGAATCATTCCAGGACTTTTCC...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTATGGCACCGTGTGGTATaGGTAAGCTCACCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLWHRVV*VSSPLY
Trigger: ATACAGGGGTGAGCTTACTCATACCACACGGTGCCA...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGGGTTCACCTTGGTTaGTGGACATATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLWVHLG*WTYKSP
Trigger: GGGAGATTTATATGTCCATCAACCAAGGTGAACCCA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCTGGAGGACCACAGGTaGCTTCAGGACTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPILEDHR*LQDSGA
Trigger: TGCTCCTGAGTCCTGAAGTCACCTGTGGTCCTCCAG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCATGCAAAGGGAGTGGTaGCGATCATGTCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAMQREW*RSCLED
Trigger: GTCCTCCAGACATGATCGTCACCACTCCCTTTGCAT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCATGCAAAGGGAGTGGTaGCGATCATGTCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPMQREW*RSCLED
Trigger: GTCCTCCAGACATGATCGTCACCACTCCCTTTGCAT...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAATGCAAAGGGAGTGGTaGCGATCATGTCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLMQREW*RSCLED
Trigger: GTCCTCCAGACATGATCGTCACCACTCCCTTTGCAT...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCTCCAATGCTCAGAACTaGCATCTGCACAGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPSNAQN*HLHSAG
Trigger: TCCCGCACTGTGCAGATGTCAGTTCTGAGCATTGGA...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGTCCAATGCTCAGAACTaGCATCTGCACAGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMSNAQN*HLHSAG
Trigger: TCCCGCACTGTGCAGATGTCAGTTCTGAGCATTGGA...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTCTGAAACCACTTCCTaGAATGCACAAGGGGTATTG +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLSETTS*NAQGVL
Trigger: CAATACCCCTTGTGCATTTCAGGAAGTGGTTTCAGA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATTCTGAAACCACTTCCTaGAATGCACAAGGGGTATTG +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANSETTS*NAQGVL
Trigger: CAATACCCCTTGTGCATTTCAGGAAGTGGTTTCAGA...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCAGGAGCTGTCCACCTTaGTGCCTTTCATCTGAAACC +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGRSCPP*CLSSET
Trigger: GGTTTCAGATGAAAGGCATCAAGGTGGACAGCTCCT...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTTGCCACTCCAAATCTaGGGAGTTAACCCAAATGTG +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKLPLQI*GVNPNV
Trigger: CACATTTGGGTTAACTCCTCAGATTTGGAGTGGCAA...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTTGCCACTCCAAATCTaGGGAGTTAACCCAAATGTG +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWLPLQI*GVNPNV
Trigger: CACATTTGGGTTAACTCCTCAGATTTGGAGTGGCAA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGTTGGTAGAAAACTCTaGCAATCTAGTACCAGAATC +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPVGRKL*QSSTRI
Trigger: GATTCTGGTACTAGATTGTCAGAGTTTTCTACCAAC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGTCCCAAGAGGCAAAATaGGGATCACATATAGCCTTA +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKSQEAK*GSHIAL
Trigger: TAAGGCTATATGTGATCCTCATTTTGCCTCTTGGGA...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTAGAAACAAGACAGGCTaGAGGATGAATTTGATTGAA +
Preference number: 4 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIRNKTG*RMNLIE
Trigger: TTCAATCAAATTCATCCTTCAGCCTGTCTTGTTTCT...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAAATCCTGACATGCAGTaGCCACAGAATTTCATACAT +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKNPDMQ*PQNFIH
Trigger: ATGTATGAAATTCTGTGGTCACTGCATGTCAGGATT...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGGGGTATTTGTGTTGTaGCAGGCACATATTACAATA +
Preference number: 4 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPGVFVL*QAHITI
Trigger: TATTGTAATATGTGCCTGTCACAACACAAATACCCC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCCCTGTTTTAGTGATTTaGCTTAACATCCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFPVLVI*LNIPSQ
Trigger: TTGGGAGGGGATGTTAAGTCAAATCACTAAAACAGG...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGACAAAAAGTGTGGTATaGAGCCAAGGCTATGCTTCA +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKTKSVV*SQGYAS
Trigger: TGAAGCATAGCCTTGGCTTCATACCACACTTTTTGT...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAAAAGGCCCCACCATTaGGAGGAGCTGGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIKRPHH*EELGWC
Trigger: GCACCAACCCAGCTCCTCTCAATGGTGGGGCCTTTT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACAGCAGGGAGTTACCTTaGCGGACTGTTTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHSRELP*RTVLKL
Trigger: CAACTTCAAAACAGTCCGTCAAGGTAACTCCCTGCT...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCACAGAGGCCTTCCTaGTCTTGGAGGTACCCAGGT +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKAQRPS*SWRYPG
Trigger: ACCTGGGTACCTCCAAGAGCAGGAAGGCCTCTGTGC...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAGCACAGAGGCCTTCCTaGTCTTGGAGGTACCCAGGT +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPAQRPS*SWRYPG
Trigger: ACCTGGGTACCTCCAAGAGCAGGAAGGCCTCTGTGC...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAATCCGTAAATAGGCTATaGGCACAGAGGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQSVNRL*AQRPSC
Trigger: GCAGGAAGGCCTCTGTGCGCATAGCCTATTTACGGA...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGTCCGTAAATAGGCTATaGGCACAGAGGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLSVNRL*AQRPSC
Trigger: GCAGGAAGGCCTCTGTGCGCATAGCCTATTTACGGA...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGAGTGCAGTACAATCATaGCTTCAATGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKSAVQS*LQWELP
Trigger: GGGAAGTTCCCATTGAAGGCATGATTGTACTGCACT...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGACCTTCACAGAATTTaGCCCCATTTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKADLHRI*PHFSGV
Trigger: CACCCCCGAGAAATGGGGGCAAATTCTGTGAAGGTC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGGACCTTCACAGAATTTaGCCCCATTTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMDLHRI*PHFSGV
Trigger: CACCCCCGAGAAATGGGGGCAAATTCTGTGAAGGTC...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLTVRSG*MAEFRS
Trigger: GCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCTVRSG*MAEFRS
Trigger: GCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGT...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCTCAGAACTGACATCTaGACAGTGCGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGLRTDI*TVRDGQ
Trigger: TTGACCATCCCGCACTGTGCAGATGTCAGTTCTGAG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATTCCTCCCATTTGCCCTaGTGTGTCCTCTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANSSHLP*CVLFFK
Trigger: TTTAAAGAAGAGGACACAGCAGGGCAAATGGGAGGA...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACCGCCACCTTCAGTTaGTTCACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKTATFS*FTAQSV
Trigger: CACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGT...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGGGGAGTTACAGGACATaGAGCCAAAAACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLGSYRT*SQKPPP
Trigger: AGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCC...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGGGAGTTACAGGACATaGAGCCAAAAACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAGSYRT*SQKPPP
Trigger: AGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGAGTGCTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWSAVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGCACT...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCAGTGCTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPSAVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGCACT...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATTTGGGGCCAGTCTGTaGAGGGAAAGTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQFGASL*RESAVL
Trigger: GAGGACAGCACTTTCCCTGCACAGACTGGCCCCAAA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCCTGCACACCACCTCATaGCAACCAACTAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKALHTTS*QPTSDW
Trigger: CCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAG...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACTGTAGGCCAACATTTTaGTCTCCCATTTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHCRPTF*SPICCG
Trigger: GCCACAGCAAATGGGAGAGCAAAATGTTGGCCTACA...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGTACCACAGCGAACATTaGAGGCTGACCACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMYHSEH*RLTTLS
Trigger: GGACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTA...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCGAATATCTGCATGGCTaGCCTCGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPEYLHG*PRFAPE
Trigger: CTCAGGTGCAAAGCGAGGCCAGCCATGCAGATATTC...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAGAATATCTGCATGGCTaGCCTCGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQEYLHG*PRFAPE
Trigger: CTCAGGTGCAAAGCGAGGCCAGCCATGCAGATATTC...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCAATCATGCCTTCAATaGGAACTTCCCTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLQSCLQ*ELPFLV
Trigger: CACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAGGGACTCCCTCTGGTaGGCGGCAGTGCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIRDSLW*AAVQYN
Trigger: ATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAACGTAGACCACAACAGTaGCCGACAGGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQRRPQQ*PTGFSS
Trigger: AGAGGAGAAGCCTGTCGGCCACTGTTGTGGTCTACG...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAACCCATTTCTCGGGGGTaGTGCTGTGCACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEPISRG*CCALPD
Trigger: ATCCGGGAGTGCACAGCACCACCCCCGAGAAATGGG...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMSDLAA*QNSGAG
Trigger: CCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGA...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLAHCQI*LHGRIQ
Trigger: CTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGC...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGGTCCTGCAGACAGATaGGTCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMGPADR*VRCMSG
Trigger: GCCGGACATACAGCGGACCCATCTGTCTGCAGGACC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATACCATGAACGAGCTCTaGACTTTCACTTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANTMNEL*TFTLMS
Trigger: GGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCACCATGAACGAGCTCTaGACTTTCACTTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPTMNEL*TFTLMS
Trigger: GGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGT...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAGGTGACGATCATGTCTaGAGGACCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQGDDHV*RTTGDF
Trigger: GAAGTCACCTGTGGTCCTCCAGACATGATCGTCACC...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGGGTGACGATCATGTCTaGAGGACCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMGDDHV*RTTGDF
Trigger: GAAGTCACCTGTGGTCCTCCAGACATGATCGTCACC...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAACTGCACAGTGCGGGATaGTCAATGCAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQLHSAG*SMQREW
Trigger: CCACTCCCTTTGCATTGACCATCCCGCACTGTGCAG...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACTGCACAGTGCGGGATaGTCAATGCAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKLHSAG*SMQREW
Trigger: CCACTCCCTTTGCATTGACCATCCCGCACTGTGCAG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCATTGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLIDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCAAT...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCAAAATGACAGCAGATaGGCTACTTTGTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKQNDSR*ATLCSE
Trigger: TTCGCTACACAAAGTAGCCCATCTGCTGTCATTTTG...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTCTCATGGGAGGAAGTaGACTAGAGTCCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHSHGRK*TRVHFA
Trigger: GGCAAAATGGACTCTAGTCCACTTCCTCCCATGAGA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGCAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLQMSPS*PSLCLM
Trigger: CATGAGACAGAGTGATGGCCAGCTTGGGGACATTTG...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATTCCCCCAACGCCACTaGGCAGAAAGCGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKFPQRH*AESGLF
Trigger: AAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATAATCAGCTGGCCCTTTaGGGCACATCATTAAAAACC +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANNQLAL*GTSLKT
Trigger: GGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAAATCAGCTGGCCCTTTaGGGCACATCATTAAAAACC +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGNQLAL*GTSLKT
Trigger: GGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATT...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTAGTACCAGAATCAGCTaGCCCTTTGGGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCSTRIS*PFGAHH
Trigger: ATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACT...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCGTCATACAAATGGGTTaGCAACCCTGTTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPVIQMG*QPCFTS
Trigger: AGACGTGAAACAGGGTTGCCAACCCATTTGTATGAC...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGACAGGGAGCTGGTGCTaGTGTGATGTGCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLTGSWC*CDVLRF
Trigger: GAATCTGAGCACATCACACCAGCACCAGCTCCCTGT...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAACAGGGAGCTGGTGCTaGTGTGATGTGCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLTGSWC*CDVLRF
Trigger: GAATCTGAGCACATCACACCAGCACCAGCTCCCTGT...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCTACATCATAAGCCTTTaGTTCCTGAGAAAAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SPNATGQKAASFPFKANVYIISL*FLRKAR
Trigger: TCTCGCTTTTCTCAGGAACCAAAGGCTTATGATGTA...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCTTGAAGTTGAAGGTCTaGAAGCCACCTGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPLKLKV*KPPVNA
Trigger: TGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAA...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCACAAAGCAATGTCGCTaGCATTCTCAATGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLTKQCR*HSQCLG
Trigger: TCCTAGGCATTGAGAATGCCAGCGACATTGCTTTGT...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420357.5
CDS-3UTR TCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAATGCAGAAGAGTCAATaGCGTCCACGCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQMQKSQ*RPRHSH
Trigger: GTGACTATGGCGTGGACGTCATTGACTCTTCTGCAT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCATGCAGAAGAGTCAATaGCGTCCACGCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPMQKSQ*RPRHSH
Trigger: GTGACTATGGCGTGGACGTCATTGACTCTTCTGCAT...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTCTCCCAGGGAAACCATaGACGAGCTCTGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPLPGKP*TSSGLS
Trigger: TGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAG...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTTGGCACCGTGTGGTATaGGTAAGCTCACCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPWHRVV*VSSPLY
Trigger: ATACAGGGGTGAGCTTACTCATACCACACGGTGCCA...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCTGGAGGACCACAGGTaGCTTCAGGACTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMLEDHR*LQDSGA
Trigger: TGCTCCTGAGTCCTGAAGTCACCTGTGGTCCTCCAG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATCCAATGCTCAGAACTaGCATCTGCACAGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQSNAQN*HLHSAG
Trigger: TCCCGCACTGTGCAGATGTCAGTTCTGAGCATTGGA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTCTGAAACCACTTCCTaGAATGCACAAGGGGTATTG +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHSETTS*NAQGVL
Trigger: CAATACCCCTTGTGCATTTCAGGAAGTGGTTTCAGA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGAGGAGCTGTCCACCTTaGTGCCTTTCATCTGAAACC +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMRSCPP*CLSSET
Trigger: GGTTTCAGATGAAAGGCATCAAGGTGGACAGCTCCT...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAGGAGCTGTCCACCTTaGTGCCTTTCATCTGAAACC +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQRSCPP*CLSSET
Trigger: GGTTTCAGATGAAAGGCATCAAGGTGGACAGCTCCT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGTCAAGGACAGAAATCTaGAGACTAAAGGTATTCCCT +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKSRTEI*RLKVFP
Trigger: AGGGAATACCTTTAGTCTTCAGATTTCTGTCCTTGA...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCTGGAGTAGGGAATTTTaGAGGCTTTGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPWSREF*RLWGQS
Trigger: AGACTGGCCCCAAAGCCTTCAAAATTCCCTACTCCA...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGTGGAGTAGGGAATTTTaGAGGCTTTGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLWSREF*RLWGQS
Trigger: AGACTGGCCCCAAAGCCTTCAAAATTCCCTACTCCA...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTGAGCTGGTGCTGGTGTaGTGTGCTCAGATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCELVLV*CAQILN
Trigger: ATTTAGAATCTGAGCACATCACACCAGCACCAGCTC...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCTCCCAAGAGGCAAAATaGGGATCACATATAGCCTTA +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPSQEAK*GSHIAL
Trigger: TAAGGCTATATGTGATCCTCATTTTGCCTCTTGGGA...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCATATCCACCAGAAGATaGGCAAGAGCAAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLISTRR*ARANLF
Trigger: GAACAGATTTGCTCTTGCTCATCTTCTGGTGGATAT...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAAAGTGCTTGGATAGATaGGTAAATCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKKCLDR*VNLFQE
Trigger: CTCTTGAAAGAGATTTACTCATCTATCCAAGCACTT...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCCCTGTTTTAGTGATTTaGCTTAACATCCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPPVLVI*LNIPSQ
Trigger: TTGGGAGGGGATGTTAAGTCAAATCACTAAAACAGG...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATCTCTGCAATGTTTCATaGGGAAACAATGACAATGGG +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANLCNVS*GNNDNG
Trigger: CCCATTGTCATTGTTTCCTCATGAAACATTGCAGAG...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGTGTAACGGCAGCTTTTaGAAGAGTTTGGAACGTAAA +
Preference number: 4 (lower is better)
Translates to: NATGQKAASFPFKANVPKCNGSF*KSLERK
Trigger: TTTACGTTCCAAACTCTTTCAAAAGCTGCCGTTACA...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGACTAACGGCCAGGTCTaGTTTCCATCCCCTGTTACT +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLTNGQV*FPSPVT
Trigger: AGTAACAGGGGATGGAAATCAGACCTGGCCGTTAGT...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGACATTCCCAATCCATaGTCTTCACAGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLDIPNP*SSQQKE
Trigger: TTCCTTTTGCTGTGAAGATCATGGATTGGGAATGTC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATTGTCTCTCCCTTCTATaGTTCACCAGAACCATAGTT +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANCLSLL*FTRTIV
Trigger: AACTATGGTTCTGGTGAATCATAGAAGGGAGAGACA...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATACAAAAAGTGTGGTATaGAGCCAAGGCTATGCTTCA +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANTKSVV*SQGYAS
Trigger: TGAAGCATAGCCTTGGCTTCATACCACACTTTTTGT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGGTTCACACTCTGGACTaGAGACGGACCATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRVHTLD*RRTIRS
Trigger: GGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAAC...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGTTCACACTCTGGACTaGAGACGGACCATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIVHTLD*RRTIRS
Trigger: GGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAAC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTCCTGGAATGATTCTTaGCGTGGTACTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCSWNDS*RGTQLS
Trigger: AGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGA...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTCCTGGAATGATTCTTaGCGTGGTACTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLSWNDS*RGTQLS
Trigger: AGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCCTGACATCTGCACAGTaGGGGATGGTCAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPLTSAQ*GMVNAK
Trigger: CTTTGCATTGACCATCCCGCACTGTGCAGATGTCAG...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCTCAGAACTGACATCTaGACAGTGCGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLLRTDI*TVRDGQ
Trigger: TTGACCATCCCGCACTGTGCAGATGTCAGTTCTGAG...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCCTCAGAACTGACATCTaGACAGTGCGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPLRTDI*TVRDGQ
Trigger: TTGACCATCCCGCACTGTGCAGATGTCAGTTCTGAG...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAACTCAGAACTGACATCTaGACAGTGCGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQLRTDI*TVRDGQ
Trigger: TTGACCATCCCGCACTGTGCAGATGTCAGTTCTGAG...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGTCTGTGCAGGGAAAGTaGTGTCCTCTTGTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMSVQGK*CPLVRR
Trigger: TCTTCGCACAAGAGGACAGCACTTTCCCTGCACAGA...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTATCTGTGCAGGGAAAGTaGTGTCCTCTTGTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLSVQGK*CPLVRR
Trigger: TCTTCGCACAAGAGGACAGCACTTTCCCTGCACAGA...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTTTTGGGGCCAGTCTGTaGAGGGAAAGTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIFGASL*RESAVL
Trigger: GAGGACAGCACTTTCCCTGCACAGACTGGCCCCAAA...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAACACTTAATCAATCTCTaGCTTCCCAGCATTATCATA +
Preference number: 4 (lower is better)
Translates to: RLNSPNATGQKAASFPFKHLINL*LPSIII
Trigger: TATGATAATGCTGGGAAGGCAGAGATTGATTAAGTG...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGAGACAGGGAGCTGGTaGTGGTGTGATGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKETGSW*WCDVLR
Trigger: TCTGAGCACATCACACCAGCACCAGCTCCCTGTCTC...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGGGATCATATCCCAACTaGCAAGTACTCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLGSYPN*QVLPNS
Trigger: GGAGTTGGGGAGTACTTGGCAGTTGGGATATGATCC...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGATCAAGAGTTCTTCCATaGCTTACCCATGGTATCACA +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGSRVLP*LTHGIT
Trigger: TGTGATACCATGGGTAAGGCATGGAAGAACTCTTGA...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAATGCAGCTTTCCTCTaGACACCACCTCATGCCAAC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLNAAFL*TPPHAN
Trigger: GTTGGCATGAGGTGGTGTGCAGAGGAAAGCTGCATT...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCAAGTTTAAATGTTACTaGCTTAGGTCCACCTCACGA +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFKFKCY*LRSTSR
Trigger: TCGTGAGGTGGACCTAAGGCAGTAACATTTAAACTT...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGTGCAGGTTATTTTCTaGACTGACATTCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLVQVIF*TDIPSQ
Trigger: TTGTGAGGGAATGTCAGTGCAGAAAATAACCTGCAC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCAGGAGCTGATGGGATaGATTCGGGAAGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMQELMG*IREGLR
Trigger: GCGAAGCCCTTCCCGAATCCATCCCATCAGCTCCTG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCGGTTATGGTCAGCCCTaGTGTCAATGTTCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGGYGQP*CQCSRL
Trigger: AAGACGAGAACATTGACACCAGGGCTGACCATAACC...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACGTAGACCACAACAGTaGCCGACAGGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPRRPQQ*PTGFSS
Trigger: AGAGGAGAAGCCTGTCGGCCACTGTTGTGGTCTACG...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACACAAAGCAATGTCGCTaGCATTCTCAATGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHTKQCR*HSQCFG
Trigger: CCCAAAGCATTGAGAATGCCAGCGACATTGCTTTGT...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAATCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKSDLAA*QNSGAG
Trigger: CCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGA...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMAHCQI*LHGRIQ
Trigger: CTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGC...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLAHCQI*LHGRIQ
Trigger: CTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGC...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGCATGGGGAAAAGTCCTaGAATGATTCTTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLHGEKS*NDSCRG
Trigger: ACCACGGCAAGAATCATTCCAGGACTTTTCCCCATG...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCATGGGGAAAAGTCCTaGAATGATTCTTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGHGEKS*NDSCRG
Trigger: ACCACGGCAAGAATCATTCCAGGACTTTTCCCCATG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAACCAAGAATTCTCCTCTaGGATGGCACCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQPRILL*DGTVWY
Trigger: ATACCACACGGTGCCATCCCAGAGGAGAATTCTTGG...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTTCAGAGCCATCTGACTaGAGGCTGGGTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPISEPSD*RLGSPW
Trigger: CCAAGGTGAACCCAGCCTCCAGTCAGATGGCTCTGA...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACTGCACAGTGCGGGATaGTCAATGCAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPLHSAG*SMQREW
Trigger: CCACTCCCTTTGCATTGACCATCCCGCACTGTGCAG...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAGAGAACGGGACTTCCTaGCAGGCAGTGAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQENGTS*QAVNGL
Trigger: TAAACCATTCACTGCCTGCCAGGAAGTCCCGTTCTC...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGCCAGTCCTTGCCTTTaGCATTGGGGGTATCAAATG +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAASPCL*HWGYQM
Trigger: CATTTGATACCCCCAATGCCAAAGGCAAGGACTGGC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGCAAAATGACAGCAGATaGGCTACTTTGTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKQNDSR*ATLCSE
Trigger: TTCGCTACACAAAGTAGCCCATCTGCTGTCATTTTG...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTCGGCTTCATCAAGCTaGGATTCTGAAATGTTTGAG +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWSASSS*DSEMFE
Trigger: CTCAAACATTTCAGAATCCCAGCTTGATGAAGCCGA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCAGTACCAGAATCAGCTaGCCCTTTGGGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPSTRIS*PFGAHH
Trigger: ATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACT...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCAGTACCAGAATCAGCTaGCCCTTTGGGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKASTRIS*PFGAHH
Trigger: ATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCAACCAACTAGTGACTaGTTGACCATCTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLQPTSD*LTIYFS
Trigger: AGAGAAGTAGATGGTCAACCAGTCACTAGTTGGTTG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTATATTTCTGATACCTaGCACAGGGTGCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHYISDT*HRVLCL
Trigger: GAGACACAGCACCCTGTGCCAGGTATCAGAAATATA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCATCTTCATGCAGAAATaGAGGTACGCAAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFIFMQK*RYASTH
Trigger: ATGAGTACTTGCGTACCTCCATTTCTGCATGAAGAT...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATAAGGCACAAAAAGTGTaGTATGAAGCCAAGGCTATG +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANKAQKV*YEAKAM
Trigger: CATAGCCTTGGCTTCATACCACACTTTTTGTGCCTT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCAAGGCACAAAAAGTGTaGTATGAAGCCAAGGCTATG +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLKAQKV*YEAKAM
Trigger: CATAGCCTTGGCTTCATACCACACTTTTTGTGCCTT...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTACAAAGCAATGTCGCTaGCATTCTCAATGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCTKQCR*HSQCLS
Trigger: GGAGAGGCATTGAGAATGCCAGCGACATTGCTTTGT...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416672.5
CDS-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAAGGCTCCTCTATGAAATaGGGCAGTGTCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEGSSMK*GSVPGA
Trigger: AGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCC...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTCGCCGTTGCATTTaGAGAATATCTGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPTRRCI*RISAWL
Trigger: CAGCCATGCAGATATTCTTCAAATGCAACGGCGAGT...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCACTCGCCGTTGCATTTaGAGAATATCTGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKATRRCI*RISAWL
Trigger: CAGCCATGCAGATATTCTTCAAATGCAACGGCGAGT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGGAAAAGTCCTGGAATaGTTCTTGCCGTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAGKVLE*FLPWYS
Trigger: TGAGTACCACGGCAAGAATCATTCCAGGACTTTTCC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCGGAAAAGTCCTGGAATaGTTCTTGCCGTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPGKVLE*FLPWYS
Trigger: TGAGTACCACGGCAAGAATCATTCCAGGACTTTTCC...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATGGCACCGTGTGGTATaGGTAAGCTCACCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKWHRVV*VSSPLY
Trigger: ATACAGGGGTGAGCTTACTCATACCACACGGTGCCA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTTGGCACCGTGTGGTATaGGTAAGCTCACCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIWHRVV*VSSPLY
Trigger: ATACAGGGGTGAGCTTACTCATACCACACGGTGCCA...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGATGCAAAGGGAGTGGTaGCGATCATGTCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRMQREW*RSCLED
Trigger: GTCCTCCAGACATGATCGTCACCACTCCCTTTGCAT...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAACTGTCCAGGAGCACATaGCACGCAAAGGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYELSRST*HAKGSK
Trigger: TTTGGACCCCTTTGCGTGTCATGTGCTCCTGGACAG...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTCAAGGACAGAAATCTaGAGACTAAAGGTATTCCCT +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLSRTEI*RLKVFP
Trigger: AGGGAATACCTTTAGTCTTCAGATTTCTGTCCTTGA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTCAAGGACAGAAATCTaGAGACTAAAGGTATTCCCT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWSRTEI*RLKVFP
Trigger: AGGGAATACCTTTAGTCTTCAGATTTCTGTCCTTGA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATGGAGTAGGGAATTTTaGAGGCTTTGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQWSREF*RLWGQS
Trigger: AGACTGGCCCCAAAGCCTTCAAAATTCCCTACTCCA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTTGGAGTAGGGAATTTTaGAGGCTTTGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPWSREF*RLWGQS
Trigger: AGACTGGCCCCAAAGCCTTCAAAATTCCCTACTCCA...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGCCCACAGGTTCAAAATaGCAGCAGATGGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMPTGSK*QQMGYF
Trigger: AAAGTAGCCCATCTGCTGTCATTTTGAACCTGTGGG...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGTTTGCCTGCTGTAGTTaGAGTCGGCTTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLFACCS*SRLHQA
Trigger: AGCTTGATGAAGCCGACTTCAACTACAGCAGGCAAA...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGTTGGTAGAAAACTCTaGCAATCTAGTACCAGAATC +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWVGRKL*QSSTRI
Trigger: GATTCTGGTACTAGATTGTCAGAGTTTTCTACCAAC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGCAGTTCATGTGTTTTTaGACCTGCTTTAATCTCTCC +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWQFMCF*TCFNLS
Trigger: GGAGAGATTAAAGCAGGTTCAAAAACACATGAACTG...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAGGGTGAAGGCTTCCTaGATGATGCATGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQRVKAS*MMHVVS
Trigger: TGAAACCACATGCATCATTCAGGAAGCCTTCACCCT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATATATCCACCAGAAGATaGGCAAGAGCAAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHISTRR*ARANLF
Trigger: GAACAGATTTGCTCTTGCTCATCTTCTGGTGGATAT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATCAACTAGTGACTGGTTaGCCATCTACTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHQLVTG*PSTSLS
Trigger: AGAAAGAGAAGTAGATGGTCAACCAGTCACTAGTTG...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAAGCTCACTTTTTATCTaGTCTGCAATTCTACCTCCT +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGSSLFI*SAILPP
Trigger: AGGAGGTAGAATTGCAGATCAGATAAAAAGTGAGCT...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGAGTCTGGTGAATCTGTaGAGTGCACCATTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLSLVNL*SAPFWW
Trigger: CCACCAAAATGGTGCACTTCACAGATTCACCAGACT...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGGATGCTACAGTCTGGTaGATCTGTGAAGTGCACCAT +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMDATVW*ICEVHH
Trigger: ATGGTGCACTTCACAGATTCACCAGACTGTAGCATC...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACCTTCACGATTCCTGTaGCCTTTACAGAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKPSRFL*PLQSWN
Trigger: GTTCCAGCTCTGTAAAGGTCACAGGAATCGTGAAGG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTTCATGAGGAAACAATaGCAATGGGCCACAGACAGT +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLFMRKQ*QWATDS
Trigger: ACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAGTCAATGAGAGTTACTaGGGATTCAAACTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGVNESY*GFKLCN
Trigger: ATTGCAGAGTTTGAATCCTCAGTAACTCTCATTGAC...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGGCGGGTGCTAGGACATaGAGTTTAAATGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLAGART*SLNVTA
Trigger: GGCAGTAACATTTAAACTTCATGTCCTAGCACCCGC...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAAGAGTGGTATGGGTTTaGGATGTGAATCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGRVVWV*DVNHLK
Trigger: TTTCAAGTGATTCACATCTCAAACCCATACCACTCT...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTGATATGTACATGTGCTaGAAAAGAAGCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCDMYMC*KRSQCS
Trigger: GCTGCACTGGCTTCTTTTTCAGCACATGTACATATC...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATAAGTCCTCCACCTGTTaGCTAGTAACATTGATGAAC +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHKSSTC*LVTLMN
Trigger: GTTCATCAATGTTACTAGGCAACAGGTGGAGGACTT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTCCGAGAGCCGTGCCTaGCTGATGATCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMSESRA*LMIRLW
Trigger: CCATAACCTGATCATCAGGCAGGCACGGCTCTCGGA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGGACCTTCACAGAATTTaGCCCCATTTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRDLHRI*PHFSGV
Trigger: CACCCCCGAGAAATGGGGGCAAATTCTGTGAAGGTC...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATTTGTCCAGAGGGTCCTaGAGACAGATGGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHLSRGS*RQMGPL
Trigger: CAGCGGACCCATCTGTCTGCAGGACCCTCTGGACAA...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGTCCTGGAATGATTCTTaGCGTGGTACTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLSWNDS*RGTQLS
Trigger: AGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGA...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACTGACATCTGCACAGTaGGGGATGGTCAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKLTSAQ*GMVNAK
Trigger: CTTTGCATTGACCATCCCGCACTGTGCAGATGTCAG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTCCTCCCATTTGCCCTaGTGTGTCCTCTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLSSHLP*CVLFFK
Trigger: TTTAAAGAAGAGGACACAGCAGGGCAAATGGGAGGA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCTCCTCCCATTTGCCCTaGTGTGTCCTCTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGSSHLP*CVLFFK
Trigger: TTTAAAGAAGAGGACACAGCAGGGCAAATGGGAGGA...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGGGGAGTTACAGGACATaGAGCCAAAAACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRGSYRT*SQKPPP
Trigger: AGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCC...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLSWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTCTAGGATTGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHSRIDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCAATCCTAGA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACATCTGCCAGTCCTTaGCTTTGGCATTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKTSASP*LWHWGY
Trigger: ATACCCCCAATGCCAAAGGCAAGGACTGGCAGATGT...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTATCCCACAGCTACTTCTaGCCTCACTTTTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLSHSYF*PHFYPC
Trigger: GCAAGGATAAAAGTGAGGGCAGAAGTAGCTGTGGGA...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCCACTTAATCAATCTCTaGCTTCCCAGCATTATCATA +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFHLINL*LPSIII
Trigger: TATGATAATGCTGGGAAGGCAGAGATTGATTAAGTG...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTATGTAGGCCAACATTTTaGTCTCCCATTTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLCRPTF*SPICCG
Trigger: GCCACAGCAAATGGGAGAGCAAAATGTTGGCCTACA...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGTCCGGGAACGTTTCTaGCATCCTCTACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMVRERF*HPLPQR
Trigger: TCGCTGTGGTAGAGGATGGCAGAAACGTTCCCGGAC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGCTGATGATCAGGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMLMIRL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACCTGATCATCAG...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCGTAGACCACAACAGTaGCCGACAGGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMRRPQQ*PTGFSS
Trigger: AGAGGAGAAGCCTGTCGGCCACTGTTGTGGTCTACG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGCAGTTTTCAGATTCCTaGCTTAGACCTTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWQFSDS*LRPSQN
Trigger: ATTCTGTGAAGGTCTAAGCCAGGAATCTGAAAACTG...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGACAAAGCAATGTCGCTaGCATTCTCAATGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLTKQCR*HSQCFG
Trigger: CCCAAAGCATTGAGAATGCCAGCGACATTGCTTTGT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAACATGGGGAAAAGTCCTaGAATGATTCTTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQHGEKS*NDSCRG
Trigger: ACCACGGCAAGAATCATTCCAGGACTTTTCCCCATG...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGGTGACGATCATGTCTaGAGGACCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIGDDHV*RTTGDF
Trigger: GAAGTCACCTGTGGTCCTCCAGACATGATCGTCACC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTGAGAACGGGACTTCCTaGCAGGCAGTGAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPENGTS*QAVNGL
Trigger: TAAACCATTCACTGCCTGCCAGGAAGTCCCGTTCTC...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAGAGAACGGGACTTCCTaGCAGGCAGTGAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQENGTS*QAVNGL
Trigger: TAAACCATTCACTGCCTGCCAGGAAGTCCCGTTCTC...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAGCCAGTCCTTGCCTTTaGCATTGGGGGTATCAAATG +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQASPCL*HWGYQM
Trigger: CATTTGATACCCCCAATGCCAAAGGCAAGGACTGGC...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACTCGGCTTCATCAAGCTaGGATTCTGAAATGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHSASSS*DSEMFE
Trigger: CTCAAACATTTCAGAATCCCAGCTTGATGAAGCCGA...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTCTCATGGGAGGAAGTaGACTAGAGTCCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPSHGRK*TRVHFA
Trigger: GGCAAAATGGACTCTAGTCCACTTCCTCCCATGAGA...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTATGTGTCTCCATTAAGTaGCTAGAAGAGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLCVSIK*LEETGS
Trigger: GCTCCCTGTCTCTTCTAGCCACTTAATGGAGACACA...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGTGTGTCTCCATTAAGTaGCTAGAAGAGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMCVSIK*LEETGS
Trigger: GCTCCCTGTCTCTTCTAGCCACTTAATGGAGACACA...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACAAACTACGGAAACGGTaGTCATTCAGCTTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHKLRKR*SFSFWL
Trigger: TAGCCAAAAGCTGAATGACCACCGTTTCCGTAGTTT...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTGAAGTTGAAGGTCTaGAAGCCACCTGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCLKLKV*KPPVNA
Trigger: TGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAA...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGGTTCCTGGTGAAGTTTaGGAGGAAAAGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLVPGEV*EEKSNR
Trigger: CCTGTTGGACTTTTCCTCCCAAACTTCACCAGGAAC...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453357.6
CDS-3UTR TCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTATGCAGAAGAGTCAATaGCGTCCACGCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIMQKSQ*RPRHSH
Trigger: GTGACTATGGCGTGGACGTCATTGACTCTTCTGCAT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR TCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACAAAGGGTTAAAGAGTaGGGACTCTGTCATGAGCTC +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKQRVKE*GLCHEL
Trigger: GAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTCAAAGGGTTAAAGAGTaGGGACTCTGTCATGAGCTC +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPQRVKE*GLCHEL
Trigger: GAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTG...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTGGAAAAGTCCTGGAATaGTTCTTGCCGTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPGKVLE*FLPWYS
Trigger: TGAGTACCACGGCAAGAATCATTCCAGGACTTTTCC...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCTGGGTTCACCTTGGTTaGTGGACATATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAWVHLG*WTYKSP
Trigger: GGGAGATTTATATGTCCATCAACCAAGGTGAACCCA...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAATGGGTTCACCTTGGTTaGTGGACATATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQWVHLG*WTYKSP
Trigger: GGGAGATTTATATGTCCATCAACCAAGGTGAACCCA...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAAGGAGCTGTCCACCTTaGTGCCTTTCATCTGAAACC +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKRSCPP*CLSSET
Trigger: GGTTTCAGATGAAAGGCATCAAGGTGGACAGCTCCT...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGCTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMLVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTCCCACAGGTTCAAAATaGCAGCAGATGGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPPTGSK*QQMGYF
Trigger: AAAGTAGCCCATCTGCTGTCATTTTGAACCTGTGGG...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAATTTGCCTGCTGTAGTTaGAGTCGGCTTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKFACCS*SRLHQA
Trigger: AGCTTGATGAAGCCGACTTCAACTACAGCAGGCAAA...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATTTGCCTGCTGTAGTTaGAGTCGGCTTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQFACCS*SRLHQA
Trigger: AGCTTGATGAAGCCGACTTCAACTACAGCAGGCAAA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTCCCAAGAGGCAAAATaGGGATCACATATAGCCTTA +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCSQEAK*GSHIAL
Trigger: TAAGGCTATATGTGATCCTCATTTTGCCTCTTGGGA...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTGGACTTAAATGCCTTTaGGGACTGAAAGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCGLKCL*GLKDLA
Trigger: TGCCAAATCTTTCAGTCCTCAAAGGCATTTAAGTCC...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAGATGCTACAGTCTGGTaGATCTGTGAAGTGCACCAT +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQDATVW*ICEVHH
Trigger: ATGGTGCACTTCACAGATTCACCAGACTGTAGCATC...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTCCTTCACGATTCCTGTaGCCTTTACAGAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVPSRFL*PLQSWN
Trigger: GTTCCAGCTCTGTAAAGGTCACAGGAATCGTGAAGG...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACGTCAATGAGAGTTACTaGGGATTCAAACTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHVNESY*GFKLCN
Trigger: ATTGCAGAGTTTGAATCCTCAGTAACTCTCATTGAC...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGCCATTTCAATGTCATaGATGACCCTGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIAISMS*MTLEWG
Trigger: TCCCCACTCCAGGGTCATTCATGACATTGAAATGGC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTACTAACGGCCAGGTCTaGTTTCCATCCCCTGTTACT +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPITNGQV*FPSPVT
Trigger: AGTAACAGGGGATGGAAATCAGACCTGGCCGTTAGT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAACATCAAATAAAAGTTaGGAGTGGTATGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGTSNKS*EWYGFE
Trigger: CTCAAACCCATACCACTCTCAACTTTTATTTGATGT...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGATATGTACATGTGCTaGAAAAGAAGCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKADMYMC*KRSQCS
Trigger: GCTGCACTGGCTTCTTTTTCAGCACATGTACATATC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGAGGAGTCTTCAGAGAGTaGCTCTGCTCCACGATCGCT +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGGVFRE*LCSTIA
Trigger: AGCGATCGTGGAGCAGAGTCACTCTCTGAAGACTCC...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS-3UTR TCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGATTGTCAGTTCCTGGTaGAGTTTGGGAGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLIVSSW*SLGGKV
Trigger: GACTTTTCCTCCCAAACTTCACCAGGAACTGACAAT...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453357.6
CDS-3UTR GCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACGCTTTGCACCTGAGTaGAATAGGGTTGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKRFAPE*NRVALD
Trigger: ATCAAGAGCAACCCTATTGCACTCAGGTGCAAAGCG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAACGCTTTGCACCTGAGTaGAATAGGGTTGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQRFAPE*NRVALD
Trigger: ATCAAGAGCAACCCTATTGCACTCAGGTGCAAAGCG...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGAGTGCAGTACAATCATaGCTTCAATGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMSAVQS*LQWELP
Trigger: GGGAAGTTCCCATTGAAGGCATGATTGTACTGCACT...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCAGTGCAGTACAATCATaGCTTCAATGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPSAVQS*LQWELP
Trigger: GGGAAGTTCCCATTGAAGGCATGATTGTACTGCACT...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGACCTTCACAGAATTTaGCCCCATTTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMDLHRI*PHFSGV
Trigger: CACCCCCGAGAAATGGGGGCAAATTCTGTGAAGGTC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGTGCGGGATGGTCAATaGAAAGGGAGTGGTGACGAT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMVRDGQ*KGSGDD
Trigger: ATCGTCACCACTCCCTTTGCATTGACCATCCCGCAC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTCTGACATCTGCACAGTaGGGGATGGTCAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSLTSAQ*GMVNAK
Trigger: CTTTGCATTGACCATCCCGCACTGTGCAGATGTCAG...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACTGACATCTGCACAGTaGGGGATGGTCAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKLTSAQ*GMVNAK
Trigger: CTTTGCATTGACCATCCCGCACTGTGCAGATGTCAG...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCTGACATCTGCACAGTaGGGGATGGTCAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPILTSAQ*GMVNAK
Trigger: CTTTGCATTGACCATCCCGCACTGTGCAGATGTCAG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGTCCTCCCATTTGCCCTaGTGTGTCCTCTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLSSHLP*CVLFFK
Trigger: TTTAAAGAAGAGGACACAGCAGGGCAAATGGGAGGA...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCAACCACTTCCTGAAATaGACAAGGGGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPNHFLK*TRGIVH
Trigger: GTGGACAATACCCCTTGTGCATTTCAGGAAGTGGTT...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAACCACTTCCTGAAATaGACAAGGGGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQNHFLK*TRGIVH
Trigger: GTGGACAATACCCCTTGTGCATTTCAGGAAGTGGTT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTATTCCCTTTGAAATaGAGCAATTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NSPNATGQKAASFPFKANVFPLK*SNFGSS
Trigger: GGAAGAACCAAAATTGCTGCATTTCAAAGGGAATAC...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPSWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTCTAGGATTGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCSRIDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCAATCCTAGA...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCAGTGCTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPSAVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGCACT...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTTCTGTGCAGGGAAAGTaGTGTCCTCTTGTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPISVQGK*CPLVRR
Trigger: TCTTCGCACAAGAGGACAGCACTTTCCCTGCACAGA...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTTCCCACAGCTACTTCTaGCCTCACTTTTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPSHSYF*PHFYPC
Trigger: GCAAGGATAAAAGTGAGGGCAGAAGTAGCTGTGGGA...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCACTTAATCAATCTCTaGCTTCCCAGCATTATCATA +
Preference number: 4 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLHLINL*LPSIII
Trigger: TATGATAATGCTGGGAAGGCAGAGATTGATTAAGTG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGGATCATATCCCAACTaGCAAGTACTCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKGSYPN*QVLPNS
Trigger: GGAGTTGGGGAGTACTTGGCAGTTGGGATATGATCC...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATGTAGGCCAACATTTTaGTCTCCCATTTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQCRPTF*SPICCG
Trigger: GCCACAGCAAATGGGAGAGCAAAATGTTGGCCTACA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCATGAAGCCAAGGCTATaGTTCATTCAACCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAMKPRL*FIQPLS
Trigger: GGAGAGAGGTTGAATGAAGCATAGCCTTGGCTTCAT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTCGCTGGCATTCTCAATaGCTAGGATGCAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPRWHSQ*LGCKDH
Trigger: ATGGTCTTTGCATCCTAGGCATTGAGAATGCCAGCG...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420357.5
CDS-3UTR CCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGCAATCATGCCTTCAATaGGAACTTCCCTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMQSCLQ*ELPFLV
Trigger: CACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTG...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAGGTTATGGTCAGCCCTaGTGTCAATGTTCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKGYGQP*CQCSRL
Trigger: AAGACGAGAACATTGACACCAGGGCTGACCATAACC...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTGGTTATGGTCAGCCCTaGTGTCAATGTTCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPGYGQP*CQCSRL
Trigger: AAGACGAGAACATTGACACCAGGGCTGACCATAACC...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAACAAATGTTCACACTCTaGACTGCAGACGGACCATTC +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQQMFTL*TADGPF
Trigger: GAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTG...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACAAAGCAATGTCGCTaGCATTCTCAATGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPTKQCR*HSQCFG
Trigger: CCCAAAGCATTGAGAATGCCAGCGACATTGCTTTGT...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGACCATGAACGAGCTCTaGACTTTCACTTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLTMNEL*TFTLMS
Trigger: GGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGT...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTCATGGGGAAAAGTCCTaGAATGATTCTTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPHGEKS*NDSCRG
Trigger: ACCACGGCAAGAATCATTCCAGGACTTTTCCCCATG...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTCAGTTCTGTCCTTGTaGGGAGTGATGACAGATTTT +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLSVLSL*GVMTDF
Trigger: AAAATCTGTCATCACTCCCCACAAGGACAGAACTGA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTCCAAGAATTCTCCTCTaGGATGGCACCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSPRILL*DGTVWY
Trigger: ATACCACACGGTGCCATCCCAGAGGAGAATTCTTGG...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTCCAAGAATTCTCCTCTaGGATGGCACCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVPRILL*DGTVWY
Trigger: ATACCACACGGTGCCATCCCAGAGGAGAATTCTTGG...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTACTGGCAGGCAGTGAATaGTTTAATTCTCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLLAGSE*FNSPEE
Trigger: TTCCTCTGGAGAATTAAACCATTCACTGCCTGCCAG...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGATTGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMIDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCAAT...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCAGTCCTTGCCTTTaGCATTGGGGGTATCAAATG +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKASPCL*HWGYQM
Trigger: CATTTGATACCCCCAATGCCAAAGGCAAGGACTGGC...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTCGGCTTCATCAAGCTaGGATTCTGAAATGTTTGAG +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLSASSS*DSEMFE
Trigger: CTCAAACATTTCAGAATCCCAGCTTGATGAAGCCGA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKQMSPS*PSLCLM
Trigger: CATGAGACAGAGTGATGGCCAGCTTGGGGACATTTG...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIQMSPS*PSLCLM
Trigger: CATGAGACAGAGTGATGGCCAGCTTGGGGACATTTG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGAATCAGCTGGCCCTTTaGGGCACATCATTAAAAACC +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLNQLAL*GTSLKT
Trigger: GGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATT...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTAGTACCAGAATCAGCTaGCCCTTTGGGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSSTRIS*PFGAHH
Trigger: ATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTTGTGTCTCCATTAAGTaGCTAGAAGAGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPCVSIK*LEETGS
Trigger: GCTCCCTGTCTCTTCTAGCCACTTAATGGAGACACA...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCAACCAACTAGTGACTaGTTGACCATCTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGQPTSD*LTIYFS
Trigger: AGAGAAGTAGATGGTCAACCAGTCACTAGTTGGTTG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCAGTGCACCATTTTGGTaGCATAATTTAAAGCCATAT +
Preference number: 4 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFSAPFW*HNLKPY
Trigger: ATATGGCTTTAAATTATGCCACCAAAATGGTGCACT...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCTATATTTCTGATACCTaGCACAGGGTGCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPYISDT*HRVLCL
Trigger: GAGACACAGCACCCTGTGCCAGGTATCAGAAATATA...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCAAAGGGTTAAAGAGTaGGGACTCTGTCATGAGCTC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIQRVKE*GLCHEL
Trigger: GAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTCAAAGGGTTAAAGAGTaGGGACTCTGTCATGAGCTC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSQRVKE*GLCHEL
Trigger: GAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTG...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAGGAAAAGTCCTGGAATaGTTCTTGCCGTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPGKVLE*FLPWYS
Trigger: TGAGTACCACGGCAAGAATCATTCCAGGACTTTTCC...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATTCCAATGCTCAGAACTaGCATCTGCACAGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHSNAQN*HLHSAG
Trigger: TCCCGCACTGTGCAGATGTCAGTTCTGAGCATTGGA...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATCTGAAACCACTTCCTaGAATGCACAAGGGGTATTG +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQSETTS*NAQGVL
Trigger: CAATACCCCTTGTGCATTTCAGGAAGTGGTTTCAGA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTTCTGAAACCACTTCCTaGAATGCACAAGGGGTATTG +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPSETTS*NAQGVL
Trigger: CAATACCCCTTGTGCATTTCAGGAAGTGGTTTCAGA...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCATCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKLVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGAGCTGGTGCTGGTGTaGTGTGCTCAGATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVELVLV*CAQILN
Trigger: ATTTAGAATCTGAGCACATCACACCAGCACCAGCTC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGAATCCTGACATGCAGTaGCCACAGAATTTCATACAT +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLNPDMQ*PQNFIH
Trigger: ATGTATGAAATTCTGTGGTCACTGCATGTCAGGATT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCAGCTCACTTTTTATCTaGTCTGCAATTCTACCTCCT +
Preference number: 4 (lower is better)
Translates to: HRCQLVENSDNLVPESAGSSLFI*SAILPP
Trigger: AGGAGGTAGAATTGCAGATCAGATAAAAAGTGAGCT...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGGTATTTGTGTTGTaGCAGGCACATATTACAATA +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLGVFVL*QAHITI
Trigger: TATTGTAATATGTGCCTGTCACAACACAAATACCCC...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGGACTTAAATGCCTTTaGGGACTGAAAGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAGLKCL*GLKDLA
Trigger: TGCCAAATCTTTCAGTCCTCAAAGGCATTTAAGTCC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTAGTCTGGTGAATCTGTaGAGTGCACCATTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSSLVNL*SAPFWW
Trigger: CCACCAAAATGGTGCACTTCACAGATTCACCAGACT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTAGTCTGGTGAATCTGTaGAGTGCACCATTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVSLVNL*SAPFWW
Trigger: CCACCAAAATGGTGCACTTCACAGATTCACCAGACT...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAGACATTCCCAATCCATaGTCTTCACAGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLDIPNP*SSQQKE
Trigger: TTCCTTTTGCTGTGAAGATCATGGATTGGGAATGTC...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGCGGGTGCTAGGACATaGAGTTTAAATGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVAGART*SLNVTA
Trigger: GGCAGTAACATTTAAACTTCATGTCCTAGCACCCGC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGTGGGGTCATAAGGCATaGTATTCTGCTGATAAACTC +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMWGHKA*YSADKL
Trigger: GAGTTTATCAGCAGAATATCATGCCTTATGACCCCA...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATTCCGTAAATAGGCTATaGGCACAGAGGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHSVNRL*AQRPSC
Trigger: GCAGGAAGGCCTCTGTGCGCATAGCCTATTTACGGA...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACGTATTCCCTTTGAAATaGAGCAATTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHVFPLK*SNFGSS
Trigger: GGAAGAACCAAAATTGCTGCATTTCAAAGGGAATAC...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKSWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAATCTAGGATTGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQSRIDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCAATCCTAGA...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGTCTAGGATTGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLSRIDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCAATCCTAGA...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTCTGTGCAGGGAAAGTaGTGTCCTCTTGTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMSVQGK*CPLVRR
Trigger: TCTTCGCACAAGAGGACAGCACTTTCCCTGCACAGA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATCCCACAGCTACTTCTaGCCTCACTTTTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKSHSYF*PHFYPC
Trigger: GCAAGGATAAAAGTGAGGGCAGAAGTAGCTGTGGGA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGGAGGCCTATGGCATCTaGAGTTCATGTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLEAYGI*SSCVFE
Trigger: TTCAAAAACACATGAACTGCAGATGCCATAGGCCTC...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGGATCATATCCCAACTaGCAAGTACTCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMGSYPN*QVLPNS
Trigger: GGAGTTGGGGAGTACTTGGCAGTTGGGATATGATCC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGACTGCACACCACCTCATaGCAACCAACTAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGLHTTS*QPTSDW
Trigger: CCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAG...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAATTACTCAATAGTGAATaGAGCTTTCCTCTGCACACC +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQLLNSE*SFPLHT
Trigger: GGTGTGCAGAGGAAAGCTGCATTCACTATTGAGTAA...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGTTCAGGAAAATTCTATaGAGACAAAACAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWFRKIL*RQNSGN
Trigger: GTTTCCACTGTTTTGTCTGCATAGAATTTTCCTGAA...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACTGTAAAAACACCACATaGTGTCAATACAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHCKNTT*CQYSQT
Trigger: TGTTTGGCTGTATTGACAGCATGTGGTGTTTTTACA...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGATACCACAGCGAACATTaGAGGCTGACCACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGYHSEH*RLTTLS
Trigger: GGACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTA...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCGTGCAGGTTATTTTCTaGACTGACATTCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPVQVIF*TDIPSQ
Trigger: TTGTGAGGGAATGTCAGTGCAGAAAATAACCTGCAC...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACGCTGGCATTCTCAATaGCTCTCCTACTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKRWHSQ*LSYSIF
Trigger: AAAGATGGAGTAGGAGAGGCATTGAGAATGCCAGCG...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416672.5
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGGTTATGGTCAGCCCTaGTGTCAATGTTCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIGYGQP*CQCSRL
Trigger: AAGACGAGAACATTGACACCAGGGCTGACCATAACC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGTCAGTTCTGTCCTTGTaGGGAGTGATGACAGATTTT +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLSVLSL*GVMTDF
Trigger: AAAATCTGTCATCACTCCCCACAAGGACAGAACTGA...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTCAGTTCTGTCCTTGTaGGGAGTGATGACAGATTTT +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPSVLSL*GVMTDF
Trigger: AAAATCTGTCATCACTCCCCACAAGGACAGAACTGA...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCCAAGAATTCTCCTCTaGGATGGCACCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMPRILL*DGTVWY
Trigger: ATACCACACGGTGCCATCCCAGAGGAGAATTCTTGG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGTCCTCTTCTTTAAATaGATATTCCAATGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FKANVPKLAITLSHGRKWVLFFK*IFQCSE
Trigger: TTCTGAGCATTGGAATATCCATTTAAAGAAGAGGAC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGGTCCTCTTCTTTAAATaGATATTCCAATGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PFKANVPKLAITLSHGRKVLFFK*IFQCSE
Trigger: TTCTGAGCATTGGAATATCCATTTAAAGAAGAGGAC...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCAATTCTCCAGAGGAATaGGGGAATATCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPNSPEE*GNIKDR
Trigger: TCTGTCCTTGATATTCCCCCATTCCTCTGGAGAATT...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAATTCTCCAGAGGAATaGGGGAATATCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQNSPEE*GNIKDR
Trigger: TCTGTCCTTGATATTCCCCCATTCCTCTGGAGAATT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGCCAGTCCTTGCCTTTaGCATTGGGGGTATCAAATG +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMASPCL*HWGYQM
Trigger: CATTTGATACCCCCAATGCCAAAGGCAAGGACTGGC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGTCCTCCACCACACCTTaGTCTGTAAATCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLSSTTP*SVNLTN
Trigger: ATTTGTGAGATTTACAGACCAAGGTGTGGTGGAGGA...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCTCCTCCACCACACCTTaGTCTGTAAATCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKASSTTP*SVNLTN
Trigger: ATTTGTGAGATTTACAGACCAAGGTGTGGTGGAGGA...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAAACTACGGAAACGGTaGTCATTCAGCTTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQKLRKR*SFSFWL
Trigger: TAGCCAAAAGCTGAATGACCACCGTTTCCGTAGTTT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR CAA 72 bp TTATCTGATCTGCAATTCTACCTCCTCCACCACACCTaGGTCTGTAAATCTCACAAATGTGGGTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSDLQFYLLHHT*VCKSHKCGFSL
Trigger: CAAAGAGAACCCACATTTGTGAGATTTACAGACCAAGGTGTGGTGGAGGAGGTAGAATTGCAGATCAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
3UTR CAA 72 bp CTTTACAGAGCTGGAACAGAGACCTCTGCGAGAACTTaGCCTTCAATACATCTGATAGCTATATCACTCAAC +
Preference number: 4 (lower is better)
Translates to: LYRAGTETSART*PSIHLIAISLN
Trigger: GTTGAGTGATATAGCTATCAGATGTATTGAAGGCAAAGTTCTCGCAGAGGTCTCTGTTCCAGCTCTGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAACAAAGGGTTAAAGAGTaGGGACTCTGTCATGAGCTC +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEQRVKE*GLCHEL
Trigger: GAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTG...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTGGGTTCACCTTGGTTaGTGGACATATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSWVHLG*WTYKSP
Trigger: GGGAGATTTATATGTCCATCAACCAAGGTGAACCCA...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCTCAAGGACAGAAATCTaGAGACTAAAGGTATTCCCT +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPSRTEI*RLKVFP
Trigger: AGGGAATACCTTTAGTCTTCAGATTTCTGTCCTTGA...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAATCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYESVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKLVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGCTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRLVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCCCACAGGTTCAAAATaGCAGCAGATGGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMPTGSK*QQMGYF
Trigger: AAAGTAGCCCATCTGCTGTCATTTTGAACCTGTGGG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTTTGCCTGCTGTAGTTaGAGTCGGCTTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMFACCS*SRLHQA
Trigger: AGCTTGATGAAGCCGACTTCAACTACAGCAGGCAAA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAATTATAAATGAAGGCTaGATTCCCCCAACGCCACTG +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKIINEG*IPPTPL
Trigger: CAGTGGCGTTGGGGGAATTCAGCCTTCATTTATAAT...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCATTGCCACTCCAAATCTaGGGAGTTAACCCAAATGTG +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPLPLQI*GVNPNV
Trigger: CACATTTGGGTTAACTCCTCAGATTTGGAGTGGCAA...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGGTTGGTAGAAAACTCTaGCAATCTAGTACCAGAATC +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLVGRKL*QSSTRI
Trigger: GATTCTGGTACTAGATTGTCAGAGTTTTCTACCAAC...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGAGCTGGTGCTGGTGTaGTGTGCTCAGATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMELVLV*CAQILN
Trigger: ATTTAGAATCTGAGCACATCACACCAGCACCAGCTC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGCAGTTCATGTGTTTTTaGACCTGCTTTAATCTCTCC +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLQFMCF*TCFNLS
Trigger: GGAGAGATTAAAGCAGGTTCAAAAACACATGAACTG...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAAAGGGTGAAGGCTTCCTaGATGATGCATGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYERVKAS*MMHVVS
Trigger: TGAAACCACATGCATCATTCAGGAAGCCTTCACCCT...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATATCCACCAGAAGATaGGCAAGAGCAAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPISTRR*ARANLF
Trigger: GAACAGATTTGCTCTTGCTCATCTTCTGGTGGATAT...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGAAAGCGAGATGCTTTTaGATTACATGTAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLKARCF*ITCSKD
Trigger: GTCTTTGCTACATGTAATTCAAAAGCATCTCGCTTT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAACAACTAGTGACTGGTTaGCCATCTACTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQQLVTG*PSTSLS
Trigger: AGAAAGAGAAGTAGATGGTCAACCAGTCACTAGTTG...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGAGCTCACTTTTTATCTaGTCTGCAATTCTACCTCCT +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMSSLFI*SAILPP
Trigger: AGGAGGTAGAATTGCAGATCAGATAAAAAGTGAGCT...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGAAGTGCTTGGATAGATaGGTAAATCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLKCLDR*VNLFQE
Trigger: CTCTTGAAAGAGATTTACTCATCTATCCAAGCACTT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAGGACTTAAATGCCTTTaGGGACTGAAAGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQGLKCL*GLKDLA
Trigger: TGCCAAATCTTTCAGTCCTCAAAGGCATTTAAGTCC...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGATGCTACAGTCTGGTaGATCTGTGAAGTGCACCAT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMDATVW*ICEVHH
Trigger: ATGGTGCACTTCACAGATTCACCAGACTGTAGCATC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGACCTTCACGATTCCTGTaGCCTTTACAGAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGPSRFL*PLQSWN
Trigger: GTTCCAGCTCTGTAAAGGTCACAGGAATCGTGAAGG...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTTTCATGAGGAAACAATaGCAATGGGCCACAGACAGT +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVFMRKQ*QWATDS
Trigger: ACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAA...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGGTCAATGAGAGTTACTaGGGATTCAAACTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLVNESY*GFKLCN
Trigger: ATTGCAGAGTTTGAATCCTCAGTAACTCTCATTGAC...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGAGCCATTTCAATGTCATaGATGACCCTGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGAISMS*MTLEWG
Trigger: TCCCCACTCCAGGGTCATTCATGACATTGAAATGGC...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCGAGAGTGTTTCTGATTaGAAGTTTTCAGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPESVSD*KFSVTL
Trigger: GAGGGTAACTGAAAACTTTCAATCAGAAACACTCTC...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAAGTCCTCCACCTGTTaGCTAGTAACATTGATGAAC +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKKSSTC*LVTLMN
Trigger: GTTCATCAATGTTACTAGGCAACAGGTGGAGGACTT...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAGTGCAGTACAATCATaGCTTCAATGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPISAVQS*LQWELP
Trigger: GGGAAGTTCCCATTGAAGGCATGATTGTACTGCACT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTGGAGTTACCTGTCAATaGAGAAGAGTCAATGACGTC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSGVTCQ*RRVNDV
Trigger: GACGTCATTGACTCTTCTGCATTGACAGGTAACTCC...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287272.6
CDS-3UTR GCA 90 bp CTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTGTATTCCCTTTGAAATaGAGCAATTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LNALLDVVEVIQMGWQPCVFPLK*SNFGSS
Trigger: GGAAGAACCAAAATTGCTGCATTTCAAAGGGAATAC...ACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMSWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAGTGCTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPISAVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGCACT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAGAGGCCTATGGCATCTaGAGTTCATGTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKEAYGI*SSCVFE
Trigger: TTCAAAAACACATGAACTGCAGATGCCATAGGCCTC...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATAATGCAGCTTTCCTCTaGACACCACCTCATGCCAAC +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHNAAFL*TPPHAN
Trigger: GTTGGCATGAGGTGGTGTGCAGAGGAAAGCTGCATT...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGAAATGCAGCTTTCCTCTaGACACCACCTCATGCCAAC +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGNAAFL*TPPHAN
Trigger: GTTGGCATGAGGTGGTGTGCAGAGGAAAGCTGCATT...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACTTCAGGAAAATTCTATaGAGACAAAACAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LVENSDNLVPESAGPLGHFRKIL*RQNSGN
Trigger: GTTTCCACTGTTTTGTCTGCATAGAATTTTCCTGAA...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGAATATAAGCATCATCTaGCTCCTCTATGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: CQLVENSDNLVPESAGPLNISII*LLYEMR
Trigger: CCTCATTTCATAGAGGAGCCAGATGATGCTTATATT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTCAATCATGCCTTCAATaGGAACTTCCCTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSQSCLQ*ELPFLV
Trigger: CACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTG...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCTGATGATCAGGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMLMIRL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACCTGATCATCAG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCCAGTTTTCAGATTCCTaGCTTAGACCTTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAQFSDS*LRPSQN
Trigger: ATTCTGTGAAGGTCTAAGCCAGGAATCTGAAAACTG...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGACCATGAACGAGCTCTaGACTTTCACTTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRTMNEL*TFTLMS
Trigger: GGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGT...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAACCATGAACGAGCTCTaGACTTTCACTTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKTMNEL*TFTLMS
Trigger: GGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGT...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAATCAGTTCTGTCCTTGTaGGGAGTGATGACAGATTTT +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKSVLSL*GVMTDF
Trigger: AAAATCTGTCATCACTCCCCACAAGGACAGAACTGA...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGACCAAGAATTCTCCTCTaGGATGGCACCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGPRILL*DGTVWY
Trigger: ATACCACACGGTGCCATCCCAGAGGAGAATTCTTGG...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGTCCTCTTCTTTAAATaGATATTCCAATGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: ASFPFKANVPKLAITLSHVLFFK*IFQCSE
Trigger: TTCTGAGCATTGGAATATCCATTTAAAGAAGAGGAC...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTAATTCTCCAGAGGAATaGGGGAATATCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPNSPEE*GNIKDR
Trigger: TCTGTCCTTGATATTCCCCCATTCCTCTGGAGAATT...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACTGGCAGGCAGTGAATaGTTTAATTCTCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPLAGSE*FNSPEE
Trigger: TTCCTCTGGAGAATTAAACCATTCACTGCCTGCCAG...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTCTGGCAGGCAGTGAATaGTTTAATTCTCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSLAGSE*FNSPEE
Trigger: TTCCTCTGGAGAATTAAACCATTCACTGCCTGCCAG...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAATCGGCTTCATCAAGCTaGGATTCTGAAATGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKSASSS*DSEMFE
Trigger: CTCAAACATTTCAGAATCCCAGCTTGATGAAGCCGA...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTAATCAGCTGGCCCTTTaGGGCACATCATTAAAAACC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSNQLAL*GTSLKT
Trigger: GGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAGTCATACAAATGGGTTaGCAACCCTGTTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPVIQMG*QPCFTS
Trigger: AGACGTGAAACAGGGTTGCCAACCCATTTGTATGAC...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAATGTGTCTCCATTAAGTaGCTAGAAGAGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYECVSIK*LEETGS
Trigger: GCTCCCTGTCTCTTCTAGCCACTTAATGGAGACACA...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGTACATCATAAGCCTTTaGTTCCTGAGAAAAGCGAGA +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLYIISL*FLRKAR
Trigger: TCTCGCTTTTCTCAGGAACCAAAGGCTTATGATGTA...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAAACTACGGAAACGGTaGTCATTCAGCTTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQKLRKR*SFSFWL
Trigger: TAGCCAAAAGCTGAATGACCACCGTTTCCGTAGTTT...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTATGCAGACAAAACAGTaGAAACTACGGAAACGGTGG +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIMQTKQ*KLRKRW
Trigger: CCACCGTTTCCGTAGTTTCCACTGTTTTGTCTGCAT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCTCTAGCCATAAGCCTTaGAGAGTGTTTCTGATTGAA +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPSSHKP*RVFLIE
Trigger: TTCAATCAGAAACACTCTCCAAGGCTTATGGCTAGA...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCATCTTCATGCAGAAATaGAGGTACGCAAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAIFMQK*RYASTH
Trigger: ATGAGTACTTGCGTACCTCCATTTCTGCATGAAGAT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGTTGAAGTTGAAGGTCTaGAAGCCACCTGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRLKLKV*KPPVNA
Trigger: TGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAA...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATGAGCTGGTGCTGGTGTaGTGTGCTCAGATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHELVLV*CAQILN
Trigger: ATTTAGAATCTGAGCACATCACACCAGCACCAGCTC...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCGAGATGCTTTTaGATTACATGTAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLKARCF*ITCSKD
Trigger: GTCTTTGCTACATGTAATTCAAAAGCATCTCGCTTT...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTCAACTAGTGACTGGTTaGCCATCTACTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSQLVTG*PSTSLS
Trigger: AGAAAGAGAAGTAGATGGTCAACCAGTCACTAGTTG...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAGAAACAAGACAGGCTaGAGGATGAATTTGATTGAA +
Preference number: 4 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQRNKTG*RMNLIE
Trigger: TTCAATCAAATTCATCCTTCAGCCTGTCTTGTTTCT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGAGAAACAAGACAGGCTaGAGGATGAATTTGATTGAA +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLRNKTG*RMNLIE
Trigger: TTCAATCAAATTCATCCTTCAGCCTGTCTTGTTTCT...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGAAGTGCTTGGATAGATaGGTAAATCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLKCLDR*VNLFQE
Trigger: CTCTTGAAAGAGATTTACTCATCTATCCAAGCACTT...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTCTCTGCAATGTTTCATaGGGAAACAATGACAATGGG +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVLCNVS*GNNDNG
Trigger: CCCATTGTCATTGTTTCCTCATGAAACATTGCAGAG...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATTTTCAATGTCATGAATaGCCCTGGAGTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHFQCHE*PWSGDV
Trigger: GACATCCCCACTCCAGGGTCATTCATGACATTGAAA...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGTGTCTCTCCCTTCTATaGTTCACCAGAACCATAGTT +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRCLSLL*FTRTIV
Trigger: AACTATGGTTCTGGTGAATCATAGAAGGGAGAGACA...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTGGGGTCATAAGGCATaGTATTCTGCTGATAAACTC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSWGHKA*YSADKL
Trigger: GAGTTTATCAGCAGAATATCATGCCTTATGACCCCA...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAGAGAGTGTTTCTGATTaGAAGTTTTCAGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKESVSD*KFSVTL
Trigger: GAGGGTAACTGAAAACTTTCAATCAGAAACACTCTC...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTAGAGTGGTATGGGTTTaGGATGTGAATCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPRVVWV*DVNHLK
Trigger: TTTCAAGTGATTCACATCTCAAACCCATACCACTCT...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGACATCAAATAAAAGTTaGGAGTGGTATGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLTSNKS*EWYGFE
Trigger: CTCAAACCCATACCACTCTCAACTTTTATTTGATGT...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATAGCAGGGAGTTACCTTaGCGGACTGTTTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHSRELP*RTVLKL
Trigger: CAACTTCAAAACAGTCCGTCAAGGTAACTCCCTGCT...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS-3UTR GCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAAGTCCTCCACCTGTTaGCTAGTAACATTGATGAAC +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIKSSTC*LVTLMN
Trigger: GTTCATCAATGTTACTAGGCAACAGGTGGAGGACTT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGAAGTCCTCCACCTGTTaGCTAGTAACATTGATGAAC +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRKSSTC*LVTLMN
Trigger: GTTCATCAATGTTACTAGGCAACAGGTGGAGGACTT...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGAGTGCAGTACAATCATaGCTTCAATGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMSAVQS*LQWELP
Trigger: GGGAAGTTCCCATTGAAGGCATGATTGTACTGCACT...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTCCTCCCATTTGCCCTaGTGTGTCCTCTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMSSHLP*CVLFFK
Trigger: TTTAAAGAAGAGGACACAGCAGGGCAAATGGGAGGA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCGTATTCCCTTTGAAATaGAGCAATTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPVFPLK*SNFGSS
Trigger: GGAAGAACCAAAATTGCTGCATTTCAAAGGGAATAC...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGAGTGCTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMSAVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGCACT...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGCACTTAATCAATCTCTaGCTTCCCAGCATTATCATA +
Preference number: 4 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMHLINL*LPSIII
Trigger: TATGATAATGCTGGGAAGGCAGAGATTGATTAAGTG...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGGAGGCCTATGGCATCTaGAGTTCATGTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: QEFFHALPMVSQIQLIFREAYGI*SSCVFE
Trigger: TTCAAAAACACATGAACTGCAGATGCCATAGGCCTC...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCTGTAAAAACACCACATaGTGTCAATACAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPCKNTT*CQYSQT
Trigger: TGTTTGGCTGTATTGACAGCATGTGGTGTTTTTACA...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCACACATTCCCATTCATaGAAAGAACTACCTTACCAA +
Preference number: 4 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKATHSHS*KELPYQ
Trigger: TTGGTAAGGTAGTTCTTTGCATGAATGGGAATGTGT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAAATGAAGCCAAGGCTATaGTTCATTCAACCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEMKPRL*FIQPLS
Trigger: GGAGAGAGGTTGAATGAAGCATAGCCTTGGCTTCAT...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAGTGCAGGTTATTTTCTaGACTGACATTCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPVQVIF*TDIPSQ
Trigger: TTGTGAGGGAATGTCAGTGCAGAAAATAACCTGCAC...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATCAGTTCTGTCCTTGTaGGGAGTGATGACAGATTTT +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKSVLSL*GVMTDF
Trigger: AAAATCTGTCATCACTCCCCACAAGGACAGAACTGA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTAATTCTCCAGAGGAATaGGGGAATATCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVNSPEE*GNIKDR
Trigger: TCTGTCCTTGATATTCCCCCATTCCTCTGGAGAATT...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTAATTCTCCAGAGGAATaGGGGAATATCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSNSPEE*GNIKDR
Trigger: TCTGTCCTTGATATTCCCCCATTCCTCTGGAGAATT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAAATTCTCCAGAGGAATaGGGGAATATCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKNSPEE*GNIKDR
Trigger: TCTGTCCTTGATATTCCCCCATTCCTCTGGAGAATT...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGATTGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMIDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCAAT...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCAAAATGACAGCAGATaGGCTACTTTGTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIQNDSR*ATLCSE
Trigger: TTCGCTACACAAAGTAGCCCATCTGCTGTCATTTTG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATCAAATACAGCACTATaGCAACTAACACCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKSNTAL*QLTPKA
Trigger: CGCCTTTGGTGTTAGTTGCCATAGTGCTGTATTTGA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTATGGTCATTCAGCTTTTaGCTAAAGCATCGATTTTCA +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLWSFSF*LKHRFS
Trigger: TGAAAATCGATGCTTTAGCCAAAAGCTGAATGACCA...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGGTCATTCAGCTTTTaGCTAAAGCATCGATTTTCA +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPWSFSF*LKHRFS
Trigger: TGAAAATCGATGCTTTAGCCAAAAGCTGAATGACCA...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAAATCCTGACATGCAGTaGCCACAGAATTTCATACAT +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKNPDMQ*PQNFIH
Trigger: ATGTATGAAATTCTGTGGTCACTGCATGTCAGGATT...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAATCAAGAGTTCTTCCATaGCTTACCCATGGTATCACA +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYESRVLP*LTHGIT
Trigger: TGTGATACCATGGGTAAGGCATGGAAGAACTCTTGA...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTTACTCAATAGTGAATaGAGCTTTCCTCTGCACACC +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMLLNSE*SFPLHT
Trigger: GGTGTGCAGAGGAAAGCTGCATTCACTATTGAGTAA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTTCAGGAAAATTCTATaGAGACAAAACAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPFRKIL*RQNSGN
Trigger: GTTTCCACTGTTTTGTCTGCATAGAATTTTCCTGAA...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTAATATAAGCATCATCTaGCTCCTCTATGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: FQGDSRALLYVRELVLFPNISII*LLYEMR
Trigger: CCTCATTTCATAGAGGAGCCAGATGATGCTTATATT...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTCAGTTCTGTCCTTGTaGGGAGTGATGACAGATTTT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMSVLSL*GVMTDF
Trigger: AAAATCTGTCATCACTCCCCACAAGGACAGAACTGA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCAAAATGACAGCAGATaGGCTACTTTGTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMQNDSR*ATLCSE
Trigger: TTCGCTACACAAAGTAGCCCATCTGCTGTCATTTTG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGAGTCATACAAATGGGTTaGCAACCCTGTTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGVIQMG*QPCFTS
Trigger: AGACGTGAAACAGGGTTGCCAACCCATTTGTATGAC...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTTCCATGCCTTACCCATaGTATCACAAATTCAACTCA +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPISMPYP*YHKFNS
Trigger: TGAGTTGAATTTGTGATACCATGGGTAAGGCATGGA...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATACATCATAAGCCTTTaGTTCCTGAGAAAAGCGAGA +
Preference number: 4 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKYIISL*FLRKAR
Trigger: TCTCGCTTTTCTCAGGAACCAAAGGCTTATGATGTA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCAACCAACTAGTGACTaGTTGACCATCTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMQPTSD*LTIYFS
Trigger: AGAGAAGTAGATGGTCAACCAGTCACTAGTTGGTTG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAGTGCACCATTTTGGTaGCATAATTTAAAGCCATAT +
Preference number: 4 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLSAPFW*HNLKPY
Trigger: ATATGGCTTTAAATTATGCCACCAAAATGGTGCACT...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTCAAATACAGCACTATaGCAACTAACACCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMSNTAL*QLTPKA
Trigger: CGCCTTTGGTGTTAGTTGCCATAGTGCTGTATTTGA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATGGTCATTCAGCTTTTaGCTAAAGCATCGATTTTCA +
Preference number: 4 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQWSFSF*LKHRFS
Trigger: TGAAAATCGATGCTTTAGCCAAAAGCTGAATGACCA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTTCTAGCCATAAGCCTTaGAGAGTGTTTCTGATTGAA +
Preference number: 4 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVSSHKP*RVFLIE
Trigger: TTCAATCAGAAACACTCTCCAAGGCTTATGGCTAGA...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR TCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGTTGGTAGAAAACTCTaGCAATCTAGTACCAGAATC +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMVGRKL*QSSTRI
Trigger: GATTCTGGTACTAGATTGTCAGAGTTTTCTACCAAC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR TCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTAAAGCGAGATGCTTTTaGATTACATGTAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSKARCF*ITCSKD
Trigger: GTCTTTGCTACATGTAATTCAAAAGCATCTCGCTTT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGACCTGTTTTAGTGATTTaGCTTAACATCCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGPVLVI*LNIPSQ
Trigger: TTGGGAGGGGATGTTAAGTCAAATCACTAAAACAGG...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAATGTAACGGCAGCTTTTaGAAGAGTTTGGAACGTAAA +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYECNGSF*KSLERK
Trigger: TTTACGTTCCAAACTCTTTCAAAAGCTGCCGTTACA...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR GCA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTGTATTCCCTTTGAAATaGAGCAATTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSVFPLK*SNFGSS
Trigger: GGAAGAACCAAAATTGCTGCATTTCAAAGGGAATAC...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGATCTAGGATTGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGSRIDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCAATCCTAGA...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGATCAAGAGTTCTTCCATaGCTTACCCATGGTATCACA +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGSRVLP*LTHGIT
Trigger: TGTGATACCATGGGTAAGGCATGGAAGAACTCTTGA...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR GCA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAACACATTCCCATTCATaGAAAGAACTACCTTACCAA +
Preference number: 4 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPTHSHS*KELPYQ
Trigger: TTGGTAAGGTAGTTCTTTGCATGAATGGGAATGTGT...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGCAGTTTTCAGATTCCTaGCTTAGACCTTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMQFSDS*LRPSQN
Trigger: ATTCTGTGAAGGTCTAAGCCAGGAATCTGAAAACTG...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATTCGGCTTCATCAAGCTaGGATTCTGAAATGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHSASSS*DSEMFE
Trigger: CTCAAACATTTCAGAATCCCAGCTTGATGAAGCCGA...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAATCCATGCCTTACCCATaGTATCACAAATTCAACTCA +
Preference number: 4 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYESMPYP*YHKFNS
Trigger: TGAGTTGAATTTGTGATACCATGGGTAAGGCATGGA...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGTGCACCATTTTGGTaGCATAATTTAAAGCCATAT +
Preference number: 4 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKSAPFW*HNLKPY
Trigger: ATATGGCTTTAAATTATGCCACCAAAATGGTGCACT...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR TCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATCAGTTCATGTGTTTTTaGACCTGCTTTAATCTCTCC +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHQFMCF*TCFNLS
Trigger: GGAGAGATTAAAGCAGGTTCAAAAACACATGAACTG...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CCA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGACAGTTTTCAGATTCCTaGCTTAGACCTTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGQFSDS*LRPSQN
Trigger: ATTCTGTGAAGGTCTAAGCCAGGAATCTGAAAACTG...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGTCCTCTTCTTTAAATaGATATTCCAATGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: QGDSRALLYVRELVLFPIVLFFK*IFQCSE
Trigger: TTCTGAGCATTGGAATATCCATTTAAAGAAGAGGAC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
3UTR CAA 72 bp ACCTTGGTCTGTAAATCTCACAAATGTGGGTTCTCTTaGAAATTGTATTGTAACATACTGTGCAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: TLVCKSHKCGFS*KLYCNILCNPD
Trigger: GTCAGGATTGCACAGTATGTTACAATACAATTTCAAAGAGAACCCACATTTGTGAGATTTACAGACCAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CCA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGTCCTCTTCTTTAAATaGATATTCCAATGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: DSRALLYVRELVLFPINMVLFFK*IFQCSE
Trigger: TTCTGAGCATTGGAATATCCATTTAAAGAAGAGGAC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CCA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATGTCCTCTTCTTTAAATaGATATTCCAATGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHVLFFK*IFQCSE
Trigger: TTCTGAGCATTGGAATATCCATTTAAAGAAGAGGAC...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR CAA 72 bp CTCTCAGCATCACTGGAACTAGTTAATGGAGGGATATaGGAATTATTAGGTCTATTTCTGATTGTAATGTCT +
Preference number: 4 (lower is better)
Translates to: LSASLELVNGGI*ELLGLFLIVMS
Trigger: AGACATTACAATCAGAAATAGACCTAATAATTCCAATATCCCTCCATTAACTAGTTCCAGTGATGCTGAGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
3UTR CAA 72 bp TGTGAAAATATGCTTGACAGTTCTAAGATGATTTCTTaGTCCTACATCATAAGCCTTTGGTTCCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: CENMLDSSKMIS*SYIISLWFLRK
Trigger: TTTTCTCAGGAACCAAAGGCTTATGATGTAGGACAAAGAAATCATCTTAGAACTGTCAAGCATATTTTCACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS CCA 90 bp CGGGGGTGGTGCTGTGCACTCCCGGATCCGCAAATGTTCACACTCTaGACTGCAGACGGACCATTCGCTCCACACTTCCCAGCTCCCATC +
Preference number: 5 (lower is better)
Translates to: RGWCCALPDPQMFTL*TADGPFAPHFPAPI
Trigger: GATGGGAGCTGGGAAGTGTGGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTGCGGATCCGGGAGTGCACAGCACCACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS GCA 90 bp AGCCATTCCACCTCGGCAGCAGGGACTCCCTCTGGTGGGCGGCAGTaGAGTACAATCATGCCTTCAATGGGAACTTCCCTTCCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: SHSTSAAGTPSGGRQ*STIMPSMGTSLPCG
Trigger: CCCACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCTGCCGAGGTGGAATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS GCA 90 bp GTGGTGCTGTGCACTCCCGGATCCGCAAATGTTCACACTCTGGACTaGAGACGGACCATTCGCTCCACACTTCCCAGCTCCCATCCACGT +
Preference number: 5 (lower is better)
Translates to: VVLCTPGSANVHTLD*RRTIRSTLPSSHPR
Trigger: ACGTGGATGGGAGCTGGGAAGTGTGGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTGCGGATCCGGGAGTGCACAGCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000420357.5
CDS GCA 90 bp GTGGTGCTGTGCACTCCCGGATCCGCAAATGTTCACACTCTGGACTaGAGACGGACCATTCGCTCCACACTTCCCAGCTCCCATCCACAG +
Preference number: 5 (lower is better)
Translates to: VVLCTPGSANVHTLD*RRTIRSTLPSSHPQ
Trigger: CTGTGGATGGGAGCTGGGAAGTGTGGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTGCGGATCCGGGAGTGCACAGCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
ENST00000474634.1
CDS GCA 90 bp GTCACTCTGGCTCCGTCTGTAAAGGGTGACACCAATGACCAGGACTaGAACGGCCACGACGGCAGCACCCAAGCCCGAGTACAAAGCAAT +
Preference number: 5 (lower is better)
Translates to: VTLAPSVKGDTNDQD*NGHDGSTQARVQSN
Trigger: ATTGCTTTGTACTCGGGCTTGGGTGCTGCCGTCGTGGCCGTTGCAGTCCTGGTCATTGGTGTCACCCTTTACAGACGGAGCCAGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS-3UTR CAA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCGGAAGGGCTTCGCCATaGTCAGTTCCTCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SPNATGQKAASFPFKANVGRASP*SVPRAA
Trigger: GGCTGCCCGAGGAACTGACAATGGCGAAGCCCTTCC...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
CDS-3UTR CAA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGGAAGGGCTTCGCCATaGTCAGTTCCTCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RLNSPNATGQKAASFPFKGRASP*SVPRAA
Trigger: GGCTGCCCGAGGAACTGACAATGGCGAAGCCCTTCC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
CDS CCA 90 bp ACAGTGCGGGATGGTCAATGCAAAGGGAGTGGTGACGATCATGTCTaGAGGACCACAGGTGACTTCAGGACTCAGGAGCACCTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: TVRDGQCKGSGDDHV*RTTGDFRTQEHLRA
Trigger: GGCTCTGAGGTGCTCCTGAGTCCTGAAGTCACCTGTGGTCCTCCAGACATGATCGTCACCACTCCCTTTGCATTGACCATCCCGCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CCA 90 bp CTGCAGACAGATGGGTCCGCTGTATGTCCGGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAGGAGCAGGGAGTTACCTTGACGGAC +
Preference number: 5 (lower is better)
Translates to: LQTDGSAVCPAHCQI*LHGRIQEQGVTLTD
Trigger: GTCCGTCAAGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATCTGTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS GCA 90 bp CGGCAGCAGGGACTCCCTCTGGTGGGCGGCAGTGCAGTACAATCATaGCTTCAATGGGAACTTCCCTTCCTTGTGGGTCTTGTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: RQQGLPLVGGSAVQS*LQWELPFLVGLVQS
Trigger: ACTTTGAACAAGACCCACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS GCA 90 bp TTAGACCTTCACAGAATTTGCCCCCATTTCTCGGGGGTGGTGCTGTaGACTCCCGGATCCGCAAATGTTCACACTCTGGACTGCAGACGG +
Preference number: 5 (lower is better)
Translates to: LDLHRICPHFSGVVL*TPGSANVHTLDCRR
Trigger: CCGTCTGCAGTCCAGAGTGTGAACATTTGCGGATCCGGGAGTGCACAGCACCACCCCCGAGAAATGGGGGCAAATTCTGTGAAGGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS CCA 90 bp CTGCAGACAGATGGGTCCGCTGTATGTCCGGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAGGAGCAGGGAGTTACCTGTCAATGC +
Preference number: 5 (lower is better)
Translates to: LQTDGSAVCPAHCQI*LHGRIQEQGVTCQC
Trigger: GCATTGACAGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATCTGTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287272.6
CDS-3UTR CAA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCTGTCATGAGCTCCTaGTCCAGAGGGTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISVMSS*SRGSCR
Trigger: TCTGCAGGACCCTCTGGACAAGGAGCTCATGACAGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS TCA 90 bp AGCATCATCTGGCTCCTCTATGAAATGAGGCAGTGTCCCAGGAGCTaGTGGGATGGATTCGGGAAGGGCTTCGCCATTGTCAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: SIIWLLYEMRQCPRS*WDGFGKGFAIVSSS
Trigger: CGAGGAACTGACAATGGCGAAGCCCTTCCCGAATCCATCCCATCAGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCCAGATGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
CDS TCA 90 bp AGCATCATCTGGCTCCTCTATGAAATGAGGCAGTGTCCCAGGAGCTaGTGGGATGGATTCGGGAAGGGCTTCGCCATTGTCAGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SIIWLLYEMRQCPRS*WDGFGKGFAIVSSW
Trigger: CCAGGAACTGACAATGGCGAAGCCCTTCCCGAATCCATCCCATCAGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCCAGATGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453357.6
CDS-3UTR CAA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAATCTGTCATGAGCTCCTaGTCCAGAGGGTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RLNSPNATGQKAASFPFKSVMSS*SRGSCR
Trigger: TCTGCAGGACCCTCTGGACAAGGAGCTCATGACAGA...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCTCTGTCATGAGCTCCTaGTCCAGAGGGTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SPNATGQKAASFPFKANVSVMSS*SRGSCR
Trigger: TCTGCAGGACCCTCTGGACAAGGAGCTCATGACAGA...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCTGTCATGAGCTCCTaGTCCAGAGGGTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPSVMSS*SRGSCR
Trigger: TCTGCAGGACCCTCTGGACAAGGAGCTCATGACAGA...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCAACCGCCACCTTCAGTaGCTTCACGGCACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: SPNATGQKAASFPFKANVNRHLQ*LHGTVC
Trigger: ACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTT...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS GCA 90 bp AGACAGATGGGTCCGCTGTATGTCCGGCTCACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGCAGGGAGTTACCTGTCAATGCAGAA +
Preference number: 5 (lower is better)
Translates to: RQMGPLYVRLTVRSG*MAEFRSRELPVNAE
Trigger: TTCTGCATTGACAGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287272.6
CDS CCA 90 bp AGATGGGTCCGCTGTATGTCCGGCTCACTGTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGGAGTTACCTGTCAATGCAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: RWVRCMSGSLSDLAA*QNSGAGSYLSMQKS
Trigger: ACTCTTCTGCATTGACAGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287272.6
CDS CCA 90 bp CTGCAGACAGATGGGTCCGCTGTATGTCCGGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAGGAGCAGGGAGTTACCAAAGGATTT +
Preference number: 5 (lower is better)
Translates to: LQTDGSAVCPAHCQI*LHGRIQEQGVTKGF
Trigger: AAATCCTTTGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATCTGTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449677.1
CDS-3UTR CAA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTCCTCAGTTCTGTCCTaGTGGGGAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: MKAEFPQRHWAESGLFPISSVLS*WGVMTD
Trigger: ATCTGTCATCACTCCCCACAAGGACAGAACTGAGGA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGAGCTCACCCCTGTATTaGGCATTACTAAGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: NATGQKAASFPFKANVPKSSPLY*ALLSAP
Trigger: GGGGGCGCTTAGTAATGCCAAATACAGGGGTGAGCT...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: SPNATGQKAASFPFKANVCRMQI*QDSWVV
Trigger: TACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCAACATCTGCCAGTCCTaGCCTTTGGCATTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: SPNATGQKAASFPFKANVNICQS*PLALGV
Trigger: TACCCCCAATGCCAAAGGCAAGGACTGGCAGATGTT...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCCAAAAGGCCCCACCATaGAGAGGAGCTGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPQKAPP*RGAGLV
Trigger: CACCAACCCAGCTCCTCTCAATGGTGGGGCCTTTTG...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS GCA 90 bp AGGATTGATGTCTGCACTTGGAGGATCTGTTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAGGACAGCTGGGTGGTAGTGGGCGTA +
Preference number: 5 (lower is better)
Translates to: RIDVCTWRICSWPLS*RMQILQDSWVVVGV
Trigger: TACGCCCACTACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTCTGTCATGAGCTCCTaGTCCAGAGGGTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLSVMSS*SRGSCR
Trigger: TCTGCAGGACCCTCTGGACAAGGAGCTCATGACAGA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATAGCTCACCCCTGTATTaGGCATTACTAAGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: NSPNATGQKAASFPFKANSSPLY*ALLSAP
Trigger: GGGGGCGCTTAGTAATGCCAAATACAGGGGTGAGCT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAAACCGCCACCTTCAGTaGCTTCACGGCACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGNRHLQ*LHGTVC
Trigger: ACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTT...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATAACCGCCACCTTCAGTaGCTTCACGGCACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: NSPNATGQKAASFPFKANNRHLQ*LHGTVC
Trigger: ACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAAC...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCACGGACTGTTTTGAAGTaGAAGGTCTGGAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPRTVLK*KVWKPP
Trigger: AGGTGGCTTCCAGACCTTCAACTTCAAAACAGTCCG...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS TCA 90 bp CGAGCTCTGGACTTTCACTTTGATGTCCGACAAAGGGTTAAAGAGTaGGGACTCTGTCATGAGCTCCTTGTCCAGAGGGTCCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: RALDFHFDVRQRVKE*GLCHELLVQRVLQT
Trigger: TGTCTGCAGGACCCTCTGGACAAGGAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS GCA 90 bp AGACAGATGGGTCCGCTGTATGTCCGGCTCACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGCAGGGAGTTACCAAAGGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: RQMGPLYVRLTVRSG*MAEFRSRELPKDFS
Trigger: AGAAAAATCCTTTGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449677.1
CDS CCA 90 bp GGACTCCCTCTGGTGGGCGGCAGTGCAGTACAATCATGCCTTCAATaGGAACTTCCCTTCCTTGTGGGTCTTGTTCAAAGTTTTTCCGTA +
Preference number: 5 (lower is better)
Translates to: GLPLVGGSAVQSCLQ*ELPFLVGLVQSFSV
Trigger: TACGGAAAAACTTTGAACAAGACCCACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAGAGGGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS CCA 90 bp TATGGTCAGCCCTGGTGTCAATGTTCTCGTCTTGTTCAGAGTCAATaGGCTCTTCATTTTTCAGCCATTCCACCTCGGCAGCAGGGACTC +
Preference number: 5 (lower is better)
Translates to: YGQPWCQCSRLVQSQ*ALHFSAIPPRQQGL
Trigger: GAGTCCCTGCTGCCGAGGTGGAATGGCTGAAAAATGAAGAGCCCATTGACTCTGAACAAGACGAGAACATTGACACCAGGGCTGACCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS CCA 90 bp CGTTCACTCTCTAGGATTGATGTCTGCACTTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATGCAGATTTTGCAGGACAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RSLSRIDVCTWRICS*PLSCRMQILQDSWV
Trigger: CACCCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CCA 90 bp GGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATGGGAGGAAGTGGACTAGAGTCCATT +
Preference number: 5 (lower is better)
Translates to: GRKRPLSHLKQMSPS*PSLCLMGGSGLESI
Trigger: AATGGACTCTAGTCCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTGGAAGGGCTTCGCCATaGTCAGTTCCTCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: FQGDSRALLYVRELVLFPGRASP*SVPRAA
Trigger: GGCTGCCCGAGGAACTGACAATGGCGAAGCCCTTCC...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATGTTGCCTAGTAACATaGATGAACACTTCGCGGACC +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPCCLVT*MNTSRT
Trigger: GGTCCGCGAAGTGTTCATCAATGTTACTAGGCAACA...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAATGTTGCCTAGTAACATaGATGAACACTTCGCGGACC +
Preference number: 5 (lower is better)
Translates to: RLNSPNATGQKAASFPFKCCLVT*MNTSRT
Trigger: GGTCCGCGAAGTGTTCATCAATGTTACTAGGCAACA...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTGAAGTCCTCCACCTGTaGCCTAGTAACATTGATGAA +
Preference number: 5 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIEVLHL*PSNIDE
Trigger: TTCATCAATGTTACTAGGCAACAGGTGGAGGACTTC...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATAACCGCCACCTTCAGTaGCTTCACGGCACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: ASFPFKANVPKLAITLSHNRHLQ*LHGTVC
Trigger: ACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGGACTAGAGTCCATTTaGCCTGCTGTAGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: RLNSPNATGQKAASFPFKGLESI*PAVVEV
Trigger: GACTTCAACTACAGCAGGCAAAATGGACTCTAGTCC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGAATCAGCTGGCCCTTaGGGGCACATCATTAAAAAC +
Preference number: 5 (lower is better)
Translates to: RLNSPNATGQKAASFPFKESAGP*GHIIKN
Trigger: GTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTC...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTCCCTCCTTGACGTTGTaGAAGTCATACAAATGGGTT +
Preference number: 5 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIPSLTL*KSYKWV
Trigger: AACCCATTTGTATGACTTCAACAACGTCAAGGAGGG...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTATGCCCTCCTTGACGTaGTTGAAGTCATACAAATGG +
Preference number: 5 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIMPSLT*LKSYKW
Trigger: CCATTTGTATGACTTCAACAACGTCAAGGAGGGCAT...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGAGCAGGGAGTTACCTaGACGGACTGTTTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPEQGVT*TDCFEV
Trigger: AACTTCAAAACAGTCCGTCAAGGTAACTCCCTGCTC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS GCA 90 bp CCACACAGTAAACTCTCAAGTTGTAATCCAGGGAGTTACAGGACATaGAGCCAAAAACCGCCACCTTCAGTTGCTTCACGGCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: PHSKLSSCNPGSYRT*SQKPPPSVASRHSL
Trigger: CAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCCTGGATTACAACTTGAGAGTTTACTGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS GCA 90 bp CTGTCTGATGGAGTAGGGAATTTTGAAGGCTTTGGGGCCAGTCTGTaGAGGGAAAGTGCTGTCCTCTTGTGCGAAGAAAGTGATGGTTTC +
Preference number: 5 (lower is better)
Translates to: LSDGVGNFEGFGASL*RESAVLLCEESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGCACTTTCCCTGCACAGACTGGCCCCAAAGCCTTCAAAATTCCCTACTCCATCAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CCA 90 bp AGATGGGTCCGCTGTATGTCCGGCTCACTGTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGGAGTTACCAAAGGATTTTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: RWVRCMSGSLSDLAA*QNSGAGSYQRIFLV
Trigger: TACAAGAAAAATCCTTTGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449677.1
CDS-3UTR CAA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGGAAGGGCTTCGCCATaGTCAGTTCCTCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVGRASP*SVPRAA
Trigger: GGCTGCCCGAGGAACTGACAATGGCGAAGCCCTTCC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCATGGCTGGCCTCGCTTaGCACCTGAGTGCAATAGGG +
Preference number: 5 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPMAGLA*HLSAIG
Trigger: CCCTATTGCACTCAGGTGCAAAGCGAGGCCAGCCAT...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCTGTTGCCTAGTAACATaGATGAACACTTCGCGGACC +
Preference number: 5 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFCCLVT*MNTSRT
Trigger: GGTCCGCGAAGTGTTCATCAATGTTACTAGGCAACA...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCTCTGGACTTTCACTTaGATGTCCGACAAAGGGTTA +
Preference number: 5 (lower is better)
Translates to: SPNATGQKAASFPFKANVLWTFT*MSDKGL
Trigger: TAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGTACTAAAGCTGTGGTaGTTTCCATGGGGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPVLKLW*FPWGKV
Trigger: GACTTTTCCCCATGGAAACAACCACAGCTTTAGTAC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTCCTCAGTTCTGTCCTaGTGGGGAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLSSVLS*WGVMTD
Trigger: ATCTGTCATCACTCCCCACAAGGACAGAACTGAGGA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: ASFPFKANVPKLAITLSHCRMQI*QDSWVV
Trigger: TACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGCCAGTCCTTGCCTTaGGCATTGGGGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: PFKANVPKLAITLSHGRKCQSLP*ALGVSN
Trigger: ATTTGATACCCCCAATGCCAAAGGCAAGGACTGGCA...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCTCCTTGACGTTGTaGAAGTCATACAAATGGGTT +
Preference number: 5 (lower is better)
Translates to: SPNATGQKAASFPFKANVPSLTL*KSYKWV
Trigger: AACCCATTTGTATGACTTCAACAACGTCAAGGAGGG...GACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTTAGGCCTTTTTCACTaGGCATGGAGATTCACAACA +
Preference number: 5 (lower is better)
Translates to: MKAEFPQRHWAESGLFPILGLFH*AWRFTT
Trigger: TGTTGTGAATCTCCATGCCAAGTGAAAAAGGCCTAA...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTCCTCCACCACACCTaGGTCTGTAAATCTCACAAA +
Preference number: 5 (lower is better)
Translates to: NATGQKAASFPFKANVPKLLHHT*VCKSHK
Trigger: TTTGTGAGATTTACAGACCAAGGTGTGGTGGAGGAG...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTCTCTCCTCTGGCTaGCTCAGTCCTTCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: HRCQLVENSDNLVPESAGPLSSG*LSPSAS
Trigger: TGAAGCTGAAGGACTGAGCAAGCCAGAGGAGAGAGG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS CCA 90 bp TACTCAGCTCTCTCAGACACTCCCAGGGAAACCATGAACGAGCTCTaGACTTTCACTTTGATGTCCGACAAAGGGTTAAAGAGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: YSALSDTPRETMNEL*TFTLMSDKGLKSED
Trigger: GTCCTCACTCTTTAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAGTGTCTGAGAGAGCTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS-3UTR CAA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGGGAACTTCCCTTCCTaGTGGGTCTTGTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: FKANVPKLAITLSHGRKWGNFPS*WVLFKV
Trigger: AACTTTGAACAAGACCCACAAGGAAGGGAAGTTCCC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGTCAATGTTCTCGTCTaGTTCAGAGTCAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLVNVLV*FRVNGL
Trigger: GAGCCCATTGACTCTGAACAAGACGAGAACATTGAC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp TTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTGGGTCAATGTTCTCGTCTaGTTCAGAGTCAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: FKANVPKLAITLSHGRKWVNVLV*FRVNGL
Trigger: GAGCCCATTGACTCTGAACAAGACGAGAACATTGAC...CCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCAATGTTCTCGTCTaGTTCAGAGTCAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: NSPNATGQKAASFPFKANVNVLV*FRVNGL
Trigger: GAGCCCATTGACTCTGAACAAGACGAGAACATTGAC...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGAAGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTGGCATTCTCAATGCTTaGGGGTTTTATTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: MKAEFPQRHWAESGLFPIGILNA*GFYFMK
Trigger: CTTCATGAAATAAAACCCCAAAGCATTGAGAATGCC...AATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAATCTGTCATGAGCTCCTaGTCCAGAGGGTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQSVMSS*SRGSCR
Trigger: TCTGCAGGACCCTCTGGACAAGGAGCTCATGACAGA...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CCTCTGCACACCACCTCATGCCAACCAACTAGTGACTGGTTGACCATCTACTTCGAGGCTGGGTTCACCTaGGTTGATGGACATATAAAT +
Preference number: 5 (lower is better)
Translates to: PLHTTSCQPTSDWLTIYFEAGFT*VDGHIN
Trigger: ATTTATATGTCCATCAACCAAGGTGAACCCAGCCTC...GAAGTAGATGGTCAACCAGTCACTAGTTGGTTGGCATGAGGTGGTGTGCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACCGCCACCTTCAGTaGCTTCACGGCACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLNRHLQ*LHGTVC
Trigger: ACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTT...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: CQLVENSDNLVPESAGPLCRMQI*QDSWVV
Trigger: TACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: PFKANVPKLAITLSHGRKICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGAAAGTGCTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLESAVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGCACTTTC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTCCTTGCCTTTGGCATaGGGGGTATCAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLSLPLA*GVSNVA
Trigger: TGCTACATTTGATACCCCCAATGCCAAAGGCAAGGA...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCGGACTAGAGTCCATTTaGCCTGCTGTAGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLGLESI*PAVVEV
Trigger: GACTTCAACTACAGCAGGCAAAATGGACTCTAGTCC...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGGAATCAGCTGGCCCTTaGGGGCACATCATTAAAAAC +
Preference number: 5 (lower is better)
Translates to: PFKANVPKLAITLSHGRKESAGP*GHIIKN
Trigger: GTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTC...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCAGTCATACAAATGGGTaGGCAACCCTGTTTCACGTC +
Preference number: 5 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPSHTNG*ATLFHV
Trigger: GACGTGAAACAGGGTTGCCAACCCATTTGTATGACT...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAAGTCATACAAATGGGTaGGCAACCCTGTTTCACGTC +
Preference number: 5 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGSHTNG*ATLFHV
Trigger: GACGTGAAACAGGGTTGCCAACCCATTTGTATGACT...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp AACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCCCTCCTTGACGTTGTaGAAGTCATACAAATGGGTT +
Preference number: 5 (lower is better)
Translates to: NATGQKAASFPFKANVPKPSLTL*KSYKWV
Trigger: AACCCATTTGTATGACTTCAACAACGTCAAGGAGGG...CTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGGAAATGTTTCTAGGTaGAGACTTCCTGGAGTGTAT +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPGNVSR*RLPGVY
Trigger: ATACACTCCAGGAAGTCTCAACCTAGAAACATTTCC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGAGAGTGGTATGGGTTaGAGATGTGAATCACTTGAA +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPESGMG*RCESLE
Trigger: TTCAAGTGATTCACATCTCAAACCCATACCACTCTC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCTCTCTCCTCTGGCTaGCTCAGTCCTTCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLPLSSG*LSPSAS
Trigger: TGAAGCTGAAGGACTGAGCAAGCCAGAGGAGAGAGG...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACAAAAGGCCCCACCATaGAGAGGAGCTGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKQKAPP*RGAGLV
Trigger: CACCAACCCAGCTCCTCTCAATGGTGGGGCCTTTTG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CAA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTCAAAAGGCCCCACCATaGAGAGGAGCTGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: FQGDSRALLYVRELVLFPQKAPP*RGAGLV
Trigger: CACCAACCCAGCTCCTCTCAATGGTGGGGCCTTTTG...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS TCA 90 bp ATTGTACTAAAGCTGTGGTTGTTTCCATGGGGAAAAGTCCTGGAATaGTTCTTGCCGTGGTACTCAGCTCTCTCAGACACTCCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: IVLKLWLFPWGKVLE*FLPWYSALSDTPRE
Trigger: TTCCCTGGGAGTGTCTGAGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGACTTTTCCCCATGGAAACAACCACAGCTTTAGTACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS-3UTR CAA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAACTTCCCTTCCTaGTGGGTCTTGTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: ASFPFKANVPKLAITLSHGNFPS*WVLFKV
Trigger: AACTTTGAACAAGACCCACAAGGAAGGGAAGTTCCC...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCCTCTGGACTTTCACTTaGATGTCCGACAAAGGGTTA +
Preference number: 5 (lower is better)
Translates to: RKRPLSHLKQMSPSWPSLLWTFT*MSDKGL
Trigger: TAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAG...GAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGCTCTGGACTTTCACTTaGATGTCCGACAAAGGGTTA +
Preference number: 5 (lower is better)
Translates to: PFKANVPKLAITLSHGRKLWTFT*MSDKGL
Trigger: TAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAG...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGCCCGTACTAAAGCTGTGGTaGTTTCCATGGGGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LCLPSIIIAHLFPQLLLPVLKLW*FPWGKV
Trigger: GACTTTTCCCCATGGAAACAACCACAGCTTTAGTAC...GGGCAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMCRMQI*QDSWVV
Trigger: TACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: LVENSDNLVPESAGPLGHICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: ASFPFKANVPKLAITLSHICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACTCCTTGCCTTTGGCATaGGGGGTATCAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: LVENSDNLVPESAGPLGHSLPLA*GVSNVA
Trigger: TGCTACATTTGATACCCCCAATGCCAAAGGCAAGGA...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAACATCTGCCAGTCCTaGCCTTTGGCATTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQNICQS*PLALGV
Trigger: TACCCCCAATGCCAAAGGCAAGGACTGGCAGATGTT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATCCCTCCTTGACGTTGTaGAAGTCATACAAATGGGTT +
Preference number: 5 (lower is better)
Translates to: NSPNATGQKAASFPFKANPSLTL*KSYKWV
Trigger: AACCCATTTGTATGACTTCAACAACGTCAAGGAGGG...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAACTATAAGAACTAGTTaGTGGTCTGTCTTACCTCTC +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPTIRTS*WSVLPL
Trigger: GAGAGGTAAGACAGACCACAAACTAGTTCTTATAGT...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAACTATAAGAACTAGTTaGTGGTCTGTCTTACCTCTC +
Preference number: 5 (lower is better)
Translates to: RLNSPNATGQKAASFPFKTIRTS*WSVLPL
Trigger: GAGAGGTAAGACAGACCACAAACTAGTTCTTATAGT...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGCTACATCATAAGCCTTaGGTTCCTGAGAAAAGCGAG +
Preference number: 5 (lower is better)
Translates to: PFKANVPKLAITLSHGRKLHHKP*VPEKSE
Trigger: CTCGCTTTTCTCAGGAACCAAAGGCTTATGATGTAG...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCGGACTGTTTTGAAGTaGAAGGTCTGGAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: HRCQLVENSDNLVPESAGRTVLK*KVWKPP
Trigger: AGGTGGCTTCCAGACCTTCAACTTCAAAACAGTCCG...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS GCA 90 bp GCATTTGAAGAATATCTGCATGGCTGGCCTCGCTTTGCACCTGAGTaGAATAGGGTTGCTCTTGATAATATAAGCATCATCTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: AFEEYLHGWPRFAPE*NRVALDNISIIWLL
Trigger: GAGGAGCCAGATGATGCTTATATTATCAAGAGCAACCCTATTGCACTCAGGTGCAAAGCGAGGCCAGCCATGCAGATATTCTTCAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACGTACTAAAGCTGTGGTaGTTTCCATGGGGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LVENSDNLVPESAGPLGHVLKLW*FPWGKV
Trigger: GACTTTTCCCCATGGAAACAACCACAGCTTTAGTAC...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAATCCTCAGTTCTGTCCTaGTGGGGAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQSSVLS*WGVMTD
Trigger: ATCTGTCATCACTCCCCACAAGGACAGAACTGAGGA...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCTCCTCAGTTCTGTCCTaGTGGGGAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKASSVLS*WGVMTD
Trigger: ATCTGTCATCACTCCCCACAAGGACAGAACTGAGGA...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAAGCTCACCCCTGTATTaGGCATTACTAAGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPSSPLY*ALLSAP
Trigger: GGGGGCGCTTAGTAATGCCAAATACAGGGGTGAGCT...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAGCTCACCCCTGTATTaGGCATTACTAAGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPISSPLY*ALLSAP
Trigger: GGGGGCGCTTAGTAATGCCAAATACAGGGGTGAGCT...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTAGCTCACCCCTGTATTaGGCATTACTAAGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSSSPLY*ALLSAP
Trigger: GGGGGCGCTTAGTAATGCCAAATACAGGGGTGAGCT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGAGGCTGGGTTCACCTaGGTTGATGGACATATAAAT +
Preference number: 5 (lower is better)
Translates to: ASFPFKANVPKLAITLSHEAGFT*VDGHIN
Trigger: ATTTATATGTCCATCAACCAAGGTGAACCCAGCCTC...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAAACCGCCACCTTCAGTaGCTTCACGGCACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPNRHLQ*LHGTVC
Trigger: ACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTT...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGGCTGAATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAACTAAAGGTATTCCCTTaGAAATGCAGCAATTTTGGT +
Preference number: 5 (lower is better)
Translates to: RLNSPNATGQKAASFPFKLKVFP*KCSNFG
Trigger: ACCAAAATTGCTGCATTTCAAAGGGAATACCTTTAG...TTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATTCAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: CQLVENSDNLVPESAGPLICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAACATCTGCCAGTCCTaGCCTTTGGCATTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKNICQS*PLALGV
Trigger: TACCCCCAATGCCAAAGGCAAGGACTGGCAGATGTT...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAACATCTGCCAGTCCTaGCCTTTGGCATTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQNICQS*PLALGV
Trigger: TACCCCCAATGCCAAAGGCAAGGACTGGCAGATGTT...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGACTAGAGTCCATTTaGCCTGCTGTAGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: CQLVENSDNLVPESAGPLGLESI*PAVVEV
Trigger: GACTTCAACTACAGCAGGCAAAATGGACTCTAGTCC...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCGAATCAGCTGGCCCTTaGGGGCACATCATTAAAAAC +
Preference number: 5 (lower is better)
Translates to: HRCQLVENSDNLVPESAGESAGP*GHIIKN
Trigger: GTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTC...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATGCCCTCCTTGACGTaGTTGAAGTCATACAAATGG +
Preference number: 5 (lower is better)
Translates to: LVENSDNLVPESAGPLGHMPSLT*LKSYKW
Trigger: CCATTTGTATGACTTCAACAACGTCAAGGAGGGCAT...GTGCCCCAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATATGCCCTCCTTGACGTaGTTGAAGTCATACAAATGG +
Preference number: 5 (lower is better)
Translates to: ASFPFKANVPKLAITLSHMPSLT*LKSYKW
Trigger: CCATTTGTATGACTTCAACAACGTCAAGGAGGGCAT...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCTGCAATGTTTCATGAGGAAACAATGACAATGGGCCACAGACAGTGGGCCGGAATAGCACTCAGCAATTaGAGTGGCTTAGATGGGAAT +
Preference number: 5 (lower is better)
Translates to: SAMFHEETMTMGHRQWAGIALSN*SGLDGN
Trigger: ATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT...TCCGGCCCACTGTCTGTGGCCCATTGTCATTGTTTCCTCATGAAACATTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGTTAGGCCTTTTTCACTaGGCATGGAGATTCACAACA +
Preference number: 5 (lower is better)
Translates to: PFKANVPKLAITLSHGRKLGLFH*AWRFTT
Trigger: TGTTGTGAATCTCCATGCCAAGTGAAAAAGGCCTAA...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCAGATATGATGTTCAAGTaGTTTATAAAACCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LGRKRPLSHLKQMSPSWPDMMFK*FIKPRP
Trigger: TGGCCTGGGTTTTATAAACAACTTGAACATCATATC...TGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATACCTCTGCGAGAACTTaGCCTTCAATACATCTGATA +
Preference number: 5 (lower is better)
Translates to: NSPNATGQKAASFPFKANTSART*PSIHLI
Trigger: TATCAGATGTATTGAAGGCAAAGTTCTCGCAGAGGT...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGAGAGTGGTATGGGTTaGAGATGTGAATCACTTGAA +
Preference number: 5 (lower is better)
Translates to: NSPNATGQKAASFPFKANESGMG*RCESLE
Trigger: TTCAAGTGATTCACATCTCAAACCCATACCACTCTC...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACTACCACAGCGAACATaGCAGGCTGACCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPLPQRT*QADHSV
Trigger: GACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTAG...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACTACCACAGCGAACATaGCAGGCTGACCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKLPQRT*QADHSV
Trigger: GACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTAG...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CAA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGCGGACTGTTTTGAAGTaGAAGGTCTGGAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLRTVLK*KVWKPP
Trigger: AGGTGGCTTCCAGACCTTCAACTTCAAAACAGTCCG...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCGAAGTCCTCCACCTGTaGCCTAGTAACATTGATGAA +
Preference number: 5 (lower is better)
Translates to: HRCQLVENSDNLVPESAGEVLHL*PSNIDE
Trigger: TTCATCAATGTTACTAGGCAACAGGTGGAGGACTTC...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CAA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCGGGAACTTCCCTTCCTaGTGGGTCTTGTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPGNFPS*WVLFKV
Trigger: AACTTTGAACAAGACCCACAAGGAAGGGAAGTTCCC...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CAA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAGGGAACTTCCCTTCCTaGTGGGTCTTGTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQGNFPS*WVLFKV
Trigger: AACTTTGAACAAGACCCACAAGGAAGGGAAGTTCCC...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGTACTAAAGCTGTGGTaGTTTCCATGGGGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: CQLVENSDNLVPESAGPLVLKLW*FPWGKV
Trigger: GACTTTTCCCCATGGAAACAACCACAGCTTTAGTAC...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATCCTCAGTTCTGTCCTaGTGGGGAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQSSVLS*WGVMTD
Trigger: ATCTGTCATCACTCCCCACAAGGACAGAACTGAGGA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAATCCTCAGTTCTGTCCTaGTGGGGAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKSSVLS*WGVMTD
Trigger: ATCTGTCATCACTCCCCACAAGGACAGAACTGAGGA...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGGAGGCTGGGTTCACCTaGGTTGATGGACATATAAAT +
Preference number: 5 (lower is better)
Translates to: CQLVENSDNLVPESAGPLEAGFT*VDGHIN
Trigger: ATTTATATGTCCATCAACCAAGGTGAACCCAGCCTC...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVCRMQI*QDSWVV
Trigger: TACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAAC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAAC...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACAGCTACTTCTGGAAAGTGCTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: NLCLPSIIIAHLFPQLLLESAVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGCACTTTC...CAGAAGTAGCTGTGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCTCCTTGCCTTTGGCATaGGGGGTATCAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKASLPLA*GVSNVA
Trigger: TGCTACATTTGATACCCCCAATGCCAAAGGCAAGGA...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAATGCCAGTCCTTGCCTTaGGCATTGGGGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQCQSLP*ALGVSN
Trigger: ATTTGATACCCCCAATGCCAAAGGCAAGGACTGGCA...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAAACATCTGCCAGTCCTaGCCTTTGGCATTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKNICQS*PLALGV
Trigger: TACCCCCAATGCCAAAGGCAAGGACTGGCAGATGTT...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAGAATCAGCTGGCCCTTaGGGGCACATCATTAAAAAC +
Preference number: 5 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLESAGP*GHIIKN
Trigger: GTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTC...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCGAATCAGCTGGCCCTTaGGGGCACATCATTAAAAAC +
Preference number: 5 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPESAGP*GHIIKN
Trigger: GTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTC...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATCATCACAGATGCCAGTaGGTAGAAAACTCTGACAAT +
Preference number: 5 (lower is better)
Translates to: ASFPFKANVPKLAITLSHHHRCQ*VENSDN
Trigger: ATTGTCAGAGTTTTCTACCAACTGGCATCTGTGATG...ATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAGTCATACAAATGGGTaGGCAACCCTGTTTCACGTC +
Preference number: 5 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQSHTNG*ATLFHV
Trigger: GACGTGAAACAGGGTTGCCAACCCATTTGTATGACT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGAGAATTACAGCTGATTaGAGGCCTATGGCATCTGCA +
Preference number: 5 (lower is better)
Translates to: CQLVENSDNLVPESAGPLRITAD*RPMASA
Trigger: TGCAGATGCCATAGGCCTCAAATCAGCTGTAATTCT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGCTCCTCCACCACACCTaGGTCTGTAAATCTCACAAA +
Preference number: 5 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLLLHHT*VCKSHK
Trigger: TTTGTGAGATTTACAGACCAAGGTGTGGTGGAGGAG...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGAAAAATACAGAGACCTaGGCAAAAGACACCACCTGC +
Preference number: 5 (lower is better)
Translates to: CQLVENSDNLVPESAGPLKNTET*AKDTTC
Trigger: GCAGGTGGTGTCTTTTGCCAAGGTCTCTGTATTTTT...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CCATTTAAAGCAAATGTCCCCAAGCTGGCCATCACTCTGTCTCATGGGAGGAAGGTCTGTACATTTATCTaGAAAAGTCTGCAACCATCC +
Preference number: 5 (lower is better)
Translates to: PFKANVPKLAITLSHGRKVCTFI*KSLQPS
Trigger: GGATGGTTGCAGACTTTTCAAGATAAATGTACAGAC...CTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTGGAAGGGCTTCGCCATaGTCAGTTCCTGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSGRASP*SVPGEV
Trigger: AACTTCACCAGGAACTGACAATGGCGAAGCCCTTCC...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453357.6
CDS-3UTR CAA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTTGTTGCCTAGTAACATaGATGAACACTTCGCGGACC +
Preference number: 5 (lower is better)
Translates to: FQGDSRALLYVRELVLFPCCLVT*MNTSRT
Trigger: GGTCCGCGAAGTGTTCATCAATGTTACTAGGCAACA...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGGAAGTCCTCCACCTGTaGCCTAGTAACATTGATGAA +
Preference number: 5 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMEVLHL*PSNIDE
Trigger: TTCATCAATGTTACTAGGCAACAGGTGGAGGACTTC...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CAA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCGTACTAAAGCTGTGGTaGTTTCCATGGGGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAVLKLW*FPWGKV
Trigger: GACTTTTCCCCATGGAAACAACCACAGCTTTAGTAC...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAGTACTAAAGCTGTGGTaGTTTCCATGGGGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQVLKLW*FPWGKV
Trigger: GACTTTTCCCCATGGAAACAACCACAGCTTTAGTAC...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATCTAAAGGTATTCCCTTaGAAATGCAGCAATTTTGGT +
Preference number: 5 (lower is better)
Translates to: NSPNATGQKAASFPFKANLKVFP*KCSNFG
Trigger: ACCAAAATTGCTGCATTTCAAAGGGAATACCTTTAG...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: FQGDSRALLYVRELVLFPICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAAC...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: FQGDSRALLYVRELVLFPVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAAC...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTAGTACCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAGAAAGTGCTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: LVPESAGPLGHIIKNLFQESAVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGCACTTTC...TTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGGTACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTCCAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTGAAAGTGCTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: FQGDSRALLYVRELVLFPESAVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGCACTTTC...AGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATGCCAGTCCTTGCCTTaGGCATTGGGGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKCQSLP*ALGVSN
Trigger: ATTTGATACCCCCAATGCCAAAGGCAAGGACTGGCA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCCCTTTGCATCACAGATGCCAGTaGGTAGAAAACTCTGACAAT +
Preference number: 5 (lower is better)
Translates to: CQLVENSDNLVPESAGPLHHRCQ*VENSDN
Trigger: ATTGTCAGAGTTTTCTACCAACTGGCATCTGTGATG...CAAAGGGCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCATAGCACTCAGCAATTaGAGTGGCTTAGATGGGAAT +
Preference number: 5 (lower is better)
Translates to: HRCQLVENSDNLVPESAGIALSN*SGLDGN
Trigger: ATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAGGTTCATCTGGGTCCTaGACTTTGGTTGTCCTGATT +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKGSSGS*TLVVLI
Trigger: AATCAGGACAACCAAAGTCAAGGACCCAGATGAACC...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp AATTCCCCCAACGCCACTGGGCAGAAAGCGGCCTCTTTCCCATTTAAAGCAAATGGTGTTTTCCTGATCTaGACATGGTATTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: NSPNATGQKAASFPFKANGVFLI*TWYCEN
Trigger: ATTTTCACAATACCATGTCAAGATCAGGAAAACACC...ATTTGCTTTAAATGGGAAAGAGGCCGCTTTCTGCCCAGTGGCGTTGGGGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACTCCTCCACCACACCTaGGTCTGTAAATCTCACAAA +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKLLHHT*VCKSHK
Trigger: TTTGTGAGATTTACAGACCAAGGTGTGGTGGAGGAG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGAAAAATACAGAGACCTaGGCAAAAGACACCACCTGC +
Preference number: 5 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLKNTET*AKDTTC
Trigger: GCAGGTGGTGTCTTTTGCCAAGGTCTCTGTATTTTT...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAAAAAATACAGAGACCTaGGCAAAAGACACCACCTGC +
Preference number: 5 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQKNTET*AKDTTC
Trigger: GCAGGTGGTGTCTTTTGCCAAGGTCTCTGTATTTTT...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CACAGATGCCAGTTGGTAGAAAACTCTGACAATCTAGTACCAGAATCAGCTGGCACCTCTGCGAGAACTTaGCCTTCAATACATCTGATA +
Preference number: 5 (lower is better)
Translates to: HRCQLVENSDNLVPESAGTSART*PSIHLI
Trigger: TATCAGATGTATTGAAGGCAAAGTTCTCGCAGAGGT...GCCAGCTGATTCTGGTACTAGATTGTCAGAGTTTTCTACCAACTGGCATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS GCA 90 bp AGCCAACAGATCACTACCTGCTTCAGTGCACTACCTAATTCTCATTaGTTAGAAATCCGAGCAGAAATTGACCTTGTCTACCATCCACTT +
Preference number: 5 (lower is better)
Translates to: SQQITTCFSALPNSH*LEIRAEIDLVYHPL
Trigger: AAGTGGATGGTAGACAAGGTCAATTTCTGCTCGGATTTCTAAGCAATGAGAATTAGGTAGTGCACTGAAGCAGGTAGTGATCTGTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474634.1
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAGAAGTCCTCCACCTGTaGCCTAGTAACATTGATGAA +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKEVLHL*PSNIDE
Trigger: TTCATCAATGTTACTAGGCAACAGGTGGAGGACTTC...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CAA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTGGGAACTTCCCTTCCTaGTGGGTCTTGTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSGNFPS*WVLFKV
Trigger: AACTTTGAACAAGACCCACAAGGAAGGGAAGTTCCC...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
CDS-3UTR CAA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGTCAATGTTCTCGTCTaGTTCAGAGTCAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVVNVLV*FRVNGL
Trigger: GAGCCCATTGACTCTGAACAAGACGAGAACATTGAC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAGAGGCTGGGTTCACCTaGGTTGATGGACATATAAAT +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKEAGFT*VDGHIN
Trigger: ATTTATATGTCCATCAACCAAGGTGAACCCAGCCTC...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPIVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAAC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGAAAGTGCTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKESAVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGCACTTTC...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGAAAGTGCTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVESAVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGCACTTTC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATCCTTGCCTTTGGCATaGGGGGTATCAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKSLPLA*GVSNVA
Trigger: TGCTACATTTGATACCCCCAATGCCAAAGGCAAGGA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTCCTTGCCTTTGGCATaGGGGGTATCAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSSLPLA*GVSNVA
Trigger: TGCTACATTTGATACCCCCAATGCCAAAGGCAAGGA...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTGCCAGTCCTTGCCTTaGGCATTGGGGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: DSRALLYVRELVLFPINMCQSLP*ALGVSN
Trigger: ATTTGATACCCCCAATGCCAAAGGCAAGGACTGGCA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGAAACATCTGCCAGTCCTaGCCTTTGGCATTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGNICQS*PLALGV
Trigger: TACCCCCAATGCCAAAGGCAAGGACTGGCAGATGTT...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGGACTAGAGTCCATTTaGCCTGCTGTAGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPIGLESI*PAVVEV
Trigger: GACTTCAACTACAGCAGGCAAAATGGACTCTAGTCC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCCATCACAGATGCCAGTaGGTAGAAAACTCTGACAAT +
Preference number: 5 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPHHRCQ*VENSDN
Trigger: ATTGTCAGAGTTTTCTACCAACTGGCATCTGTGATG...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAGCCCATCACAGATGCCAGTaGGTAGAAAACTCTGACAAT +
Preference number: 5 (lower is better)
Translates to: TLLKSYKWVGNPVSRLKAHHRCQ*VENSDN
Trigger: ATTGTCAGAGTTTTCTACCAACTGGCATCTGTGATG...GGCTTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCAAGTCATACAAATGGGTaGGCAACCCTGTTTCACGTC +
Preference number: 5 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPSHTNG*ATLFHV
Trigger: GACGTGAAACAGGGTTGCCAACCCATTTGTATGACT...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATGCCCTCCTTGACGTaGTTGAAGTCATACAAATGG +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKMPSLT*LKSYKW
Trigger: CCATTTGTATGACTTCAACAACGTCAAGGAGGGCAT...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAGGAAATGTTTCTAGGTaGAGACTTCCTGGAGTGTAT +
Preference number: 5 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLGNVSR*RLPGVY
Trigger: ATACACTCCAGGAAGTCTCAACCTAGAAACATTTCC...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGAAGTCCTCCACCTGTaGCCTAGTAACATTGATGAA +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPIEVLHL*PSNIDE
Trigger: TTCATCAATGTTACTAGGCAACAGGTGGAGGACTTC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp TCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAGGCATTCTCAATGCTTaGGGGTTTTATTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: SLTLLKSYKWVGNPVSRLGILNA*GFYFMK
Trigger: CTTCATGAAATAAAACCCCAAAGCATTGAGAATGCC...TAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGCTCTGGACTTTCACTTaGATGTCCGACAAAGGGTTA +
Preference number: 5 (lower is better)
Translates to: QEFFHALPMVSQIQLIFRLWTFT*MSDKGL
Trigger: TAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAG...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACTCTGGACTTTCACTTaGATGTCCGACAAAGGGTTA +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKLWTFT*MSDKGL
Trigger: TAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAG...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCTCTGGACTTTCACTTaGATGTCCGACAAAGGGTTA +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPILWTFT*MSDKGL
Trigger: TAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGAGTTCTTCCATGCCTTACCCATGGTATCACAAATTCAACTCATCTTTAGGGAGGCTGGGTTCACCTaGGTTGATGGACATATAAAT +
Preference number: 5 (lower is better)
Translates to: QEFFHALPMVSQIQLIFREAGFT*VDGHIN
Trigger: ATTTATATGTCCATCAACCAAGGTGAACCCAGCCTC...CCTAAAGATGAGTTGAATTTGTGATACCATGGGTAAGGCATGGAAGAACTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGAGGCTGGGTTCACCTaGGTTGATGGACATATAAAT +
Preference number: 5 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVEAGFT*VDGHIN
Trigger: ATTTATATGTCCATCAACCAAGGTGAACCCAGCCTC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAATCCTTGCCTTTGGCATaGGGGGTATCAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYESLPLA*GVSNVA
Trigger: TGCTACATTTGATACCCCCAATGCCAAAGGCAAGGA...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATTGCCAGTCCTTGCCTTaGGCATTGGGGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHCQSLP*ALGVSN
Trigger: ATTTGATACCCCCAATGCCAAAGGCAAGGACTGGCA...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp CTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAACATCACAGATGCCAGTaGGTAGAAAACTCTGACAAT +
Preference number: 5 (lower is better)
Translates to: LDVVEVIQMGWQPCFTSKHHRCQ*VENSDN
Trigger: ATTGTCAGAGTTTTCTACCAACTGGCATCTGTGATG...TTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGAGTCATACAAATGGGTaGGCAACCCTGTTTCACGTC +
Preference number: 5 (lower is better)
Translates to: DSRALLYVRELVLFPINMSHTNG*ATLFHV
Trigger: GACGTGAAACAGGGTTGCCAACCCATTTGTATGACT...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTCCCTCCTTGACGTTGTaGAAGTCATACAAATGGGTT +
Preference number: 5 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSPSLTL*KSYKWV
Trigger: AACCCATTTGTATGACTTCAACAACGTCAAGGAGGG...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp ATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCACTTTGACTATAAGAACTAGTTaGTGGTCTGTCTTACCTCTC +
Preference number: 5 (lower is better)
Translates to: IALSNLSGLDGNRDGPTLTIRTS*WSVLPL
Trigger: GAGAGGTAAGACAGACCACAAACTAGTTCTTATAGT...CAAAGTGGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAAGAATTACAGCTGATTaGAGGCCTATGGCATCTGCA +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKRITAD*RPMASA
Trigger: TGCAGATGCCATAGGCCTCAAATCAGCTGTAATTCT...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCATCTGGGTCCTTGACTTaGGTTGTCCTGATTGTGAAT +
Preference number: 5 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPSGSLT*VVLIVN
Trigger: ATTCACAATCAGGACAACCAAAGTCAAGGACCCAGA...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAATCTGGGTCCTTGACTTaGGTTGTCCTGATTGTGAAT +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKSGSLT*VVLIVN
Trigger: ATTCACAATCAGGACAACCAAAGTCAAGGACCCAGA...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGGTTCATCTGGGTCCTaGACTTTGGTTGTCCTGATT +
Preference number: 5 (lower is better)
Translates to: DSRALLYVRELVLFPINMGSSGS*TLVVLI
Trigger: AATCAGGACAACCAAAGTCAAGGACCCAGATGAACC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp ATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTTTTCCCACTACATCATAAGCCTTaGGTTCCTGAGAAAAGCGAG +
Preference number: 5 (lower is better)
Translates to: MHLINLCLPSIIIAHLFPLHHKP*VPEKSE
Trigger: CTCGCTTTTCTCAGGAACCAAAGGCTTATGATGTAG...TGGGAAAAGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GTTCTAATAGCACTCAGCAATTTGAGTGGCTTAGATGGGAATAGAGATGGTCCCCCAGACATTCAGGGATaGACAATAATCTTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: VLIALSNLSGLDGNRDGPPDIQG*TIILSH
Trigger: ATGAGACAAGATTATTGTCAATCCCTGAATGTCTGG...GGGACCATCTCTATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTATTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGGAGCAGGGAGTTACCTaGACGGACTGTTTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: DSRALLYVRELVLFPINMEQGVT*TDCFEV
Trigger: AACTTCAAAACAGTCCGTCAAGGTAACTCCCTGCTC...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS-3UTR CAA 90 bp ATTCTAAATGCCCTCCTTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCCTAAAGGTATTCCCTTaGAAATGCAGCAATTTTGGT +
Preference number: 5 (lower is better)
Translates to: ILNALLDVVEVIQMGWQPLKVFP*KCSNFG
Trigger: ACCAAAATTGCTGCATTTCAAAGGGAATACCTTTAG...GGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAAGGAGGGCATTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTATAGCACTCAGCAATTaGAGTGGCTTAGATGGGAAT +
Preference number: 5 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSIALSN*SGLDGN
Trigger: ATTCCCATCTAAGCCACTCAAATTGCTGAGTGCTAT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TACTTCTGCCCTCACTTTTATCCTTGCCACTCCAAATCTGAGGAGTTAACCCAAGGTGTTTTCCTGATCTaGACATGGTATTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: YFCPHFYPCHSKSEELTQGVFLI*TWYCEN
Trigger: ATTTTCACAATACCATGTCAAGATCAGGAAAACACC...TTGGGTTAACTCCTCAGATTTGGAGTGGCAAGGATAAAAGTGAGGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CCAGAATCAGCTGGCCCTTTGGGGCACATCATTAAAAACCTATTTCAAAGCATGGATATGATGTTCAAGTaGTTTATAAAACCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: PESAGPLGHIIKNLFQSMDMMFK*FIKPRP
Trigger: TGGCCTGGGTTTTATAAACAACTTGAACATCATATC...CATGCTTTGAAATAGGTTTTTAATGATGTGCCCCAAAGGGCCAGCTGATTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTTTTCAAGAGGGGTATTaGTGTTGTGACAGGCACATA +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPIFQEGY*CCDRHI
Trigger: TATGTGCCTGTCACAACACAAATACCCCTCTTGAAA...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTTTTCAAGAGGGGTATTaGTGTTGTGACAGGCACATA +
Preference number: 5 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVFQEGY*CCDRHI
Trigger: TATGTGCCTGTCACAACACAAATACCCCTCTTGAAA...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAAACCTCTGCGAGAACTTaGCCTTCAATACATCTGATA +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKTSART*PSIHLI
Trigger: TATCAGATGTATTGAAGGCAAAGTTCTCGCAGAGGT...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTGGCATTCTCAATGCTTaGGGGTTTTATTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPIGILNA*GFYFMK
Trigger: CTTCATGAAATAAAACCCCAAAGCATTGAGAATGCC...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGAATGCCCTCCTTGACGTaGTTGAAGTCATACAAATGG +
Preference number: 5 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGMPSLT*LKSYKW
Trigger: CCATTTGTATGACTTCAACAACGTCAAGGAGGGCAT...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTACTATAAGAACTAGTTaGTGGTCTGTCTTACCTCTC +
Preference number: 5 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSTIRTS*WSVLPL
Trigger: GAGAGGTAAGACAGACCACAAACTAGTTCTTATAGT...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGAAGAATTACAGCTGATTaGAGGCCTATGGCATCTGCA +
Preference number: 5 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGRITAD*RPMASA
Trigger: TGCAGATGCCATAGGCCTCAAATCAGCTGTAATTCT...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp AGAGATTTTGTGATGACACAGTACCCACATGTTAGACAATTTCAAGAATCTGGATCTGGGTCCTTGACTTaGGTTGTCCTGATTGTGAAT +
Preference number: 5 (lower is better)
Translates to: RDFVMTQYPHVRQFQESGSGSLT*VVLIVN
Trigger: ATTCACAATCAGGACAACCAAAGTCAAGGACCCAGA...TCCAGATTCTTGAAATTGTCTAACATGTGGGTACTGTGTCATCACAAAATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CTGAACTCAATATTAGTAGTGGGGAAGGGAATTTTTAAGCTTAGGCATAACCATCTACATCATAAGCCTTaGGTTCCTGAGAAAAGCGAG +
Preference number: 5 (lower is better)
Translates to: LNSILVVGKGIFKLRHNHLHHKP*VPEKSE
Trigger: CTCGCTTTTCTCAGGAACCAAAGGCTTATGATGTAG...ATGGTTATGCCTAAGCTTAAAAATTCCCTTCCCCACTACTAATATTGAGTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTCCAGACATTCAGGGATaGACAATAATCTTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVPDIQG*TIILSH
Trigger: ATGAGACAAGATTATTGTCAATCCCTGAATGTCTGG...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCCAGACATTCAGGGATaGACAATAATCTTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPIPDIQG*TIILSH
Trigger: ATGAGACAAGATTATTGTCAATCCCTGAATGTCTGG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTTTCAAGAGGGGTATTaGTGTTGTGACAGGCACATA +
Preference number: 5 (lower is better)
Translates to: DSRALLYVRELVLFPINMFQEGY*CCDRHI
Trigger: TATGTGCCTGTCACAACACAAATACCCCTCTTGAAA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp TTGACGTTGTTGAAGTCATACAAATGGGTTGGCAACCCTGTTTCACGTCTAAAACTAAAGGTATTCCCTTaGAAATGCAGCAATTTTGGT +
Preference number: 5 (lower is better)
Translates to: LTLLKSYKWVGNPVSRLKLKVFP*KCSNFG
Trigger: ACCAAAATTGCTGCATTTCAAAGGGAATACCTTTAG...TTTTAGACGTGAAACAGGGTTGCCAACCCATTTGTATGACTTCAACAACGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp CAAGGAGATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTCTAAAGGTATTCCCTTaGAAATGCAGCAATTTTGGT +
Preference number: 5 (lower is better)
Translates to: QGDSRALLYVRELVLFPILKVFP*KCSNFG
Trigger: ACCAAAATTGCTGCATTTCAAAGGGAATACCTTTAG...AATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATCTCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS-3UTR CAA 90 bp TCAAAGCATGCACTTAATCAATCTCTGCCTTCCCAGCATTATCATAGCTCATCTGGTGTTTTCCTGATCTaGACATGGTATTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: SKHALNQSLPSQHYHSSSGVFLI*TWYCEN
Trigger: ATTTTCACAATACCATGTCAAGATCAGGAAAACACC...AGATGAGCTATGATAATGCTGGGAAGGCAGAGATTGATTAAGTGCATGCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GGATCACATATAGCCTTACTGAGAGATTTTGTGATGACACAGTACCCACATGTTGATATGATGTTCAAGTaGTTTATAAAACCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: GSHIALLRDFVMTQYPHVDMMFK*FIKPRP
Trigger: TGGCCTGGGTTTTATAAACAACTTGAACATCATATC...AACATGTGGGTACTGTGTCATCACAAAATCTCTCAGTAAGGCTATATGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000453357.6
CDS-3UTR CAA 90 bp GTTTCTAGGTTGAGACTTCCTGGAGTGTATGTACCAATCAGACATGATTATGAAGTCTGTACATTTATCTaGAAAAGTCTGCAACCATCC +
Preference number: 5 (lower is better)
Translates to: VSRLRLPGVYVPIRHDYEVCTFI*KSLQPS
Trigger: GGATGGTTGCAGACTTTTCAAGATAAATGTACAGAC...TTCATAATCATGTCTGATTGGTACATACACTCCAGGAAGTCTCAACCTAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287272.6
ENST00000404895.7
CDS-3UTR CAA 90 bp GATAGTAGAGCCCTCTTATATGTAAGAGAGCTTGTACTCTTCCCTATTAACATGTCTCCTACTCCATCTTaGGGGTTTTATTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: DSRALLYVRELVLFPINMSPTPS*GFYFMK
Trigger: CTTCATGAAATAAAACCCCAAAGATGGAGTAGGAGA...CATGTTAATAGGGAAGAGTACAAGCTCTCTTACATATAAGAGGGCTCTACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416672.5
CDS GCA 72 bp TTCCCACGGCGCGGCGACCGCTGCCGCCAGCGCGGATaGCGGAGTCGCCCGCAGTCCCCGCCGCGCAGTTCC +
Preference number: 6 (lower is better)
Translates to: FPRRGDRCRQRG*RSRPQSPPRSS
Trigger: GGAACTGCGCGGCGGGGACTGCGGGCGACTCCGGCATCCGCGCTGGCGGCAGCGGTCGCCGCGCCGTGGGAA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS GCA 72 bp TTCGCCATTGTCAGTTCCTCGGGCAGCCGCGGTCCCTaGCGCCCAGAAGCACAGCCCCAGCCACGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: FAIVSSSGSRGP*RPEAQPQPREP
Trigger: TGGCTCCCGTGGCTGGGGCTGTGCTTCTGGGCGGCAGGGACCGCGGCTGCCCGAGGAACTGACAATGGCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
CDS TCA 72 bp TCTTCACGCTCCGGGAGCCCGGGAAAGGGTCGGCGATaGGGGTCCCGAGTCGAATGGGTCTCGGGAGTCTTC +
Preference number: 6 (lower is better)
Translates to: SSRSGSPGKGRR*GSRVEWVSGVF
Trigger: GAAGACTCCCGAGACCCATTCGACTCGGGACCCTCATCGCCGACCCTTTCCCGGGCTCCCGGAGCGTGAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404895.7
CDS GCA 72 bp GCTCCGTCTGTAAAGGGTGACACCAATGACCAGGACTaGAACGGCCACGACGGCAGCACCCAAGCCCGAGTA +
Preference number: 6 (lower is better)
Translates to: APSVKGDTNDQD*NGHDGSTQARV
Trigger: TACTCGGGCTTGGGTGCTGCCGTCGTGGCCGTTGCAGTCCTGGTCATTGGTGTCACCCTTTACAGACGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS CCA 72 bp CAGCCATTCCACCTCGGCAGCAGGGACTCCCTCTGGTaGGCGGCAGTGCAGTACAATCATGCCTTCAATGGG +
Preference number: 6 (lower is better)
Translates to: QPFHLGSRDSLW*AAVQYNHAFNG
Trigger: CCCATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCTGCCGAGGTGGAATGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS GCA 72 bp ACCTCGGCAGCAGGGACTCCCTCTGGTGGGCGGCAGTaGAGTACAATCATGCCTTCAATGGGAACTTCCCTT +
Preference number: 6 (lower is better)
Translates to: TSAAGTPSGGRQ*STIMPSMGTSL
Trigger: AAGGGAAGTTCCCATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCTGCCGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS GCA 72 bp TGCACTCCCGGATCCGCAAATGTTCACACTCTGGACTaGAGACGGACCATTCGCTCCACACTTCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: CTPGSANVHTLD*RRTIRSTLPSS
Trigger: GGAGCTGGGAAGTGTGGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTGCGGATCCGGGAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS GCA 72 bp GAGGACTCTGTCATGAGCTCCTTGTCCAGAGGGTCCTaGAGACAGATGGGTCCGCTGTATGTCCGGCTCACT +
Preference number: 6 (lower is better)
Translates to: EDSVMSSLSRGS*RQMGPLYVRLT
Trigger: AGTGAGCCGGACATACAGCGGACCCATCTGTCTGCAGGACCCTCTGGACAAGGAGCTCATGACAGAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS GCA 72 bp CACAGAATTTGCCCCCATTTCTCGGGGGTGGTGCTGTaGACTCCCGGATCCGCAAATGTTCACACTCTGGAC +
Preference number: 6 (lower is better)
Translates to: HRICPHFSGVVL*TPGSANVHTLD
Trigger: GTCCAGAGTGTGAACATTTGCGGATCCGGGAGTGCACAGCACCACCCCCGAGAAATGGGGGCAAATTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS GCA 72 bp GGTCCGCTGTATGTCCGGCTCACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGCAGGGAGTTACCTGTC +
Preference number: 6 (lower is better)
Translates to: GPLYVRLTVRSG*MAEFRSRELPV
Trigger: GACAGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287272.6
CDS CCA 72 bp TTTCAGCCATTCCACCTCGGCAGCAGGGACTCCCTCTaGTGGGCGGCAGTGCAGTACAATCATGCCTTCAAT +
Preference number: 6 (lower is better)
Translates to: FQPFHLGSRDSL*WAAVQYNHAFN
Trigger: ATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCCTGCTGCCGAGGTGGAATGGCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS CCA 72 bp TGCTGTGCACTCCCGGATCCGCAAATGTTCACACTCTaGACTGCAGACGGACCATTCGCTCCACACTTCCCA +
Preference number: 6 (lower is better)
Translates to: CCALPDPQMFTL*TADGPFAPHFP
Trigger: TGGGAAGTGTGGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTGCGGATCCGGGAGTGCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS CCA 72 bp GATGGGTCCGCTGTATGTCCGGCTCACTGTCAGATCTaGCTGCATGGCAGAATTCAGGAGCAGGGAGTTACC +
Preference number: 6 (lower is better)
Translates to: DGSAVCPAHCQI*LHGRIQEQGVT
Trigger: GGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS TCA 72 bp TGGCTCCTCTATGAAATGAGGCAGTGTCCCAGGAGCTaGTGGGATGGATTCGGGAAGGGCTTCGCCATTGTC +
Preference number: 6 (lower is better)
Translates to: WLLYEMRQCPRS*WDGFGKGFAIV
Trigger: GACAATGGCGAAGCCCTTCCCGAATCCATCCCATCAGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS GCA 72 bp GGACTCCCTCTGGTGGGCGGCAGTGCAGTACAATCATaGCTTCAATGGGAACTTCCCTTCCTTGTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: GLPLVGGSAVQS*LQWELPFLVGL
Trigger: AAGACCCACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAGAGGGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS GCA 72 bp GGTCCGCTGTATGTCCGGCTCACTGTCAGATCTGGCTaGATGGCAGAATTCAGGAGCAGGGAGTTACCAAAG +
Preference number: 6 (lower is better)
Translates to: GPLYVRLTVRSG*MAEFRSRELPK
Trigger: CTTTGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449677.1
CDS CCA 72 bp CGCTGTATGTCCGGCTCACTGTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGGAGTTACCTTGACGGA +
Preference number: 6 (lower is better)
Translates to: RCMSGSLSDLAA*QNSGAGSYLDG
Trigger: TCCGTCAAGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS CCA 72 bp CGGCAGCACCCAAGCCCGAGTACAAAGCAATGTCGCTaGCATTCTCAATGCCTCTCCTACTCCATCTTTGGG +
Preference number: 6 (lower is better)
Translates to: RQHPSPSTKQCR*HSQCLSYSIFG
Trigger: CCCAAAGATGGAGTAGGAGAGGCATTGAGAATGCCAGCGACATTGCTTTGTACTCGGGCTTGGGTGCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416672.5
CDS TCA 72 bp GGAGCAGGGAGTTACCTGTCAATGCAGAAGAGTCAATaGCGTCCACGCCATAGTCACTCTGGCTCCGTCTGT +
Preference number: 6 (lower is better)
Translates to: GAGSYLSMQKSQ*RPRHSHSGSVC
Trigger: ACAGACGGAGCCAGAGTGACTATGGCGTGGACGTCATTGACTCTTCTGCATTGACAGGTAACTCCCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287272.6
CDS TCA 72 bp TTTCTGCCATCCTCTACCACAGCGAACATTGCAGGCTaGCCACTCTGTCCAGGAAGACCAGCCTCCATTCAC +
Preference number: 6 (lower is better)
Translates to: FLPSSTTANIAG*PLCPGRPASIH
Trigger: GTGAATGGAGGCTGGTCTTCCTGGACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTAGAGGATGGCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
ENST00000474634.1
CDS TCA 72 bp AGGTCTGGAAGCCACCTGTCAATGCAGAAGAGTCAATaGCGTCCACGCCATAGTCACTCTGGCTCCGTCTGT +
Preference number: 6 (lower is better)
Translates to: RSGSHLSMQKSQ*RPRHSHSGSVC
Trigger: ACAGACGGAGCCAGAGTGACTATGGCGTGGACGTCATTGACTCTTCTGCATTGACAGGTGGCTTCCAGACCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS GCA 72 bp CTCAGAACTGACATCTGCACAGTGCGGGATGGTCAATaGAAAGGGAGTGGTGACGATCATGTCTGGAGGACC +
Preference number: 6 (lower is better)
Translates to: LRTDICTVRDGQ*KGSGDDHVWRT
Trigger: GGTCCTCCAGACATGATCGTCACCACTCCCTTTGCATTGACCATCCCGCACTGTGCAGATGTCAGTTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CCA 72 bp CGCTGTATGTCCGGCTCACTGTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGGAGTTACCTGTCAATG +
Preference number: 6 (lower is better)
Translates to: RCMSGSLSDLAA*QNSGAGSYLSM
Trigger: CATTGACAGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287272.6
CDS CCA 72 bp GATGGTCAATGCAAAGGGAGTGGTGACGATCATGTCTaGAGGACCACAGGTGACTTCAGGACTCAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: DGQCKGSGDDHV*RTTGDFRTQEH
Trigger: GTGCTCCTGAGTCCTGAAGTCACCTGTGGTCCTCCAGACATGATCGTCACCACTCCCTTTGCATTGACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CCA 72 bp CGGCAGCACCCAAGCCCGAGTACAAAGCAATGTCGCTaGCATTCTCAATGCCTAGGATGCAAAGACCATCTG +
Preference number: 6 (lower is better)
Translates to: RQHPSPSTKQCR*HSQCLGCKDHL
Trigger: CAGATGGTCTTTGCATCCTAGGCATTGAGAATGCCAGCGACATTGCTTTGTACTCGGGCTTGGGTGCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420357.5
ENST00000474634.1
CDS CAA 90 bp ATCCAGGGAGTTACAGGACATGCAGCCAAAAACCGCCACCTTCAGTaGCTTCACGGCACAGTCTGTGATTGGCTCTCCAGTGAGCGCATA +
Preference number: 6 (lower is better)
Translates to: IQGVTGHAAKNRHLQ*LHGTVCDWLSSERI
Trigger: TATGCGCTCACTGGAGAGCCAATCACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS GCA 72 bp GGTTGTTTCCATGGGGAAAAGTCCTGGAATGATTCTTaGCGTGGTACTCAGCTCTCTCAGACACTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GCFHGEKSWNDS*RGTQLSQTLPG
Trigger: CCCTGGGAGTGTCTGAGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGACTTTTCCCCATGGAAACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS CCA 72 bp CGCTGTATGTCCGGCTCACTGTCAGATCTGGCTGCATaGCAGAATTCAGGAGCAGGGAGTTACCAAAGGATT +
Preference number: 6 (lower is better)
Translates to: RCMSGSLSDLAA*QNSGAGSYQRI
Trigger: AATCCTTTGGTAACTCCCTGCTCCTGAATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449677.1
CDS CAA 72 bp GGCCCATGGAAGTCCTCCACCTGTTGCCTAGTAACATaGATGAACACTTCGCGGACCTTCAAACCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: GPWKSSTCCLVT*MNTSRTFKPEL
Trigger: GAGCTCAGGTTTGAAGGTCCGCGAAGTGTTCATCAATGTTACTAGGCAACAGGTGGAGGACTTCCATGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS CAA 72 bp CCAATAGTCCTCGGGCCCATGGAAGTCCTCCACCTGTaGCCTAGTAACATTGATGAACACTTCGCGGACCTT +
Preference number: 6 (lower is better)
Translates to: PIVLGPMEVLHL*PSNIDEHFADL
Trigger: AAGGTCCGCGAAGTGTTCATCAATGTTACTAGGCAACAGGTGGAGGACTTCCATGGGCCCGAGGACTATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS CAA 90 bp CTCTCTAGGATTGATGTCTGCACTTGGAGGATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATTTTGCAGGACAGCTGGGTGGTAGTG +
Preference number: 6 (lower is better)
Translates to: LSRIDVCTWRICSWP*SCRMQILQDSWVVV
Trigger: CACTACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCAATCCTAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CCA 72 bp CTGGTGGGCGGCAGTGCAGTACAATCATGCCTTCAATaGGAACTTCCCTTCCTTGTGGGTCTTGTTCAAAGT +
Preference number: 6 (lower is better)
Translates to: LVGGSAVQSCLQ*ELPFLVGLVQS
Trigger: ACTTTGAACAAGACCCACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS CCA 72 bp CGGCCTCTTTCCCATTTAAAGCAAATGTCCCCAAGCTaGCCATCACTCTGTCTCATGGGAGGAAGTGGACTA +
Preference number: 6 (lower is better)
Translates to: RPLSHLKQMSPS*PSLCLMGGSGL
Trigger: TAGTCCACTTCCTCCCATGAGACAGAGTGATGGCCAGCTTGGGGACATTTGCTTTAAATGGGAAAGAGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CAA 72 bp TTTGGGGCCAGTCTGTGCAGGGAAAGTGCTGTCCTCTaGTGCGAAGAAAGTGATGGTTTCTCGTTCACTCTC +
Preference number: 6 (lower is better)
Translates to: FGASLCRESAVL*CEESDGFSFTL
Trigger: GAGAGTGAACGAGAAACCATCACTTTCTTCGCACAAGAGGACAGCACTTTCCCTGCACAGACTGGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CAA 72 bp ATTGATGTCTGCACTTGGAGGATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATTTTGCAGGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: IDVCTWRICSWP*SCRMQILQDSW
Trigger: CCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CAA 72 bp CTCTGTCTCATGGGAGGAAGTGGACTAGAGTCCATTTaGCCTGCTGTAGTTGAAGTCGGCTTCATCAAGCTG +
Preference number: 6 (lower is better)
Translates to: LCLMGGSGLESI*PAVVEVGFIKL
Trigger: CAGCTTGATGAAGCCGACTTCAACTACAGCAGGCAAAATGGACTCTAGTCCACTTCCTCCCATGAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CAA 90 bp TCAGACACTCCCAGGGAAACCATGAACGAGCTCTGGACTTTCACTTaGATGTCCGACAAAGGGTTAAAGAGTGAGGACTCTGTCATGAGC +
Preference number: 6 (lower is better)
Translates to: SDTPRETMNELWTFT*MSDKGLKSEDSVMS
Trigger: GCTCATGACAGAGTCCTCACTCTTTAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAGTGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS TCA 72 bp GACTTTCACTTTGATGTCCGACAAAGGGTTAAAGAGTaGGGACTCTGTCATGAGCTCCTTGTCCAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: DFHFDVRQRVKE*GLCHELLVQRV
Trigger: GACCCTCTGGACAAGGAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTGTCGGACATCAAAGTGAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS GCA 72 bp AAACTCTCAAGTTGTAATCCAGGGAGTTACAGGACATaGAGCCAAAAACCGCCACCTTCAGTTGCTTCACGG +
Preference number: 6 (lower is better)
Translates to: KLSSCNPGSYRT*SQKPPPSVASR
Trigger: CCGTGAAGCAACTGAAGGTGGCGGTTTTTGGCTGCATGTCCTGTAACTCCCTGGATTACAACTTGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS GCA 72 bp GTGATGGTTTCTCGTTCACTCTCTAGGATTGATGTCTaGACTTGGAGGATCTGTTCATGGCCTTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: VMVSRSLSRIDV*TWRICSWPLSC
Trigger: GCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAACGAGAAACCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CCA 72 bp CTCTCAGACACTCCCAGGGAAACCATGAACGAGCTCTaGACTTTCACTTTGATGTCCGACAAAGGGTTAAAG +
Preference number: 6 (lower is better)
Translates to: LSDTPRETMNEL*TFTLMSDKGLK
Trigger: CTTTAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGGAGTGTCTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS CCA 72 bp TCTAGGATTGATGTCTGCACTTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATGCAGATTTTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: SRIDVCTWRICS*PLSCRMQILQD
Trigger: GTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCAATCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CCA 72 bp GTTTCTCGTTCACTCTCTAGGATTGATGTCTGCACTTaGAGGATCTGTTCATGGCCTTTGAGCTGCCGAATG +
Preference number: 6 (lower is better)
Translates to: VSRSLSRIDVCT*RICSWPLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAACGAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS CAA 72 bp CCCAGGGAAACCATGAACGAGCTCTGGACTTTCACTTaGATGTCCGACAAAGGGTTAAAGAGTGAGGACTCT +
Preference number: 6 (lower is better)
Translates to: PRETMNELWTFT*MSDKGLKSEDS
Trigger: AGAGTCCTCACTCTTTAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAGCTCGTTCATGGTTTCCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS CAA 72 bp AATGGCCAAAGACACCAGTTGTCCTCAGTTCTGTCCTaGTGGGGAGTGATGACAGATTTTGGATGTAGGGCA +
Preference number: 6 (lower is better)
Translates to: NGQRHQLSSVLS*WGVMTDFGCRA
Trigger: TGCCCTACATCCAAAATCTGTCATCACTCCCCACAAGGACAGAACTGAGGACAACTGGTGTCTTTGGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
ENST00000474634.1
CDS CAA 90 bp CCTGATGATCAGGTTATGGTCAGCCCTGGTGTCAATGTTCTCGTCTaGTTCAGAGTCAATGGGCTCTTCATTTTTCAGCCATTCCACCTC +
Preference number: 6 (lower is better)
Translates to: PDDQVMVSPGVNVLV*FRVNGLFIFQPFHL
Trigger: GAGGTGGAATGGCTGAAAAATGAAGAGCCCATTGACTCTGAACAAGACGAGAACATTGACACCAGGGCTGACCATAACCTGATCATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS TCA 72 bp GTGCAGGGAAAGTGCTGTCCTCTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCTCTAGGATTGATGTCT +
Preference number: 6 (lower is better)
Translates to: VQGKCCPLVRRK*WFLVHSLGLMS
Trigger: AGACATCAATCCTAGAGAGTGAACGAGAAACCATCACTTTCTTCGCACAAGAGGACAGCACTTTCCCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS GCA 72 bp ACACTTCCCAGCTCCCATCCACAGGACAAAGAGAAGTaGAGGTTATTTTCTGCACTGACATTCCCTCACAAA +
Preference number: 6 (lower is better)
Translates to: TLPSSHPQDKEK*RLFSALTFPHK
Trigger: TTTGTGAGGGAATGTCAGTGCAGAAAATAACCTGCACTTCTCTTTGTCCTGTGGATGGGAGCTGGGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404895.7
ENST00000416672.5
ENST00000453357.6
ENST00000474634.1
CDS CAA 72 bp CAGGTTATGGTCAGCCCTGGTGTCAATGTTCTCGTCTaGTTCAGAGTCAATGGGCTCTTCATTTTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: QVMVSPGVNVLV*FRVNGLFIFQP
Trigger: TGGCTGAAAAATGAAGAGCCCATTGACTCTGAACAAGACGAGAACATTGACACCAGGGCTGACCATAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS CAA 90 bp GCTGAGATGAAGACTGCAAAATCTAATCTCAGCATTGGTTCTGGTTaGCTGTGTAAATCAAGTGGACTAGTGGAGCCGCAGTGTTTGCAG +
Preference number: 6 (lower is better)
Translates to: AEMKTAKSNLSIGSG*LCKSSGLVEPQCLQ
Trigger: CTGCAAACACTGCGGCTCCACTAGTCCACTTGATTTACACAGCAAACCAGAACCAATGCTGAGATTAGATTTTGCAGTCTTCATCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474634.1
CDS GCA 72 bp GAATATCTGCATGGCTGGCCTCGCTTTGCACCTGAGTaGAATAGGGTTGCTCTTGATAATATAAGCATCATC +
Preference number: 6 (lower is better)
Translates to: EYLHGWPRFAPE*NRVALDNISII
Trigger: GATGATGCTTATATTATCAAGAGCAACCCTATTGCACTCAGGTGCAAAGCGAGGCCAGCCATGCAGATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
CDS GCA 72 bp AGCCCGAGTACAAAGCAATGTCGCTGGCATTCTCAATaGCTCTCCTACTCCATCTTTGGGGTTTTATTTCAT +
Preference number: 6 (lower is better)
Translates to: SPSTKQCRWHSQ*LSYSIFGVLFH
Trigger: ATGAAATAAAACCCCAAAGATGGAGTAGGAGAGGCATTGAGAATGCCAGCGACATTGCTTTGTACTCGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416672.5
CDS GCA 72 bp TGGCATTCTCAATGCCTAGGATGCAAAGACCATCTGTaGAGTTTTCAGATTCCTGGCTTAGACCTTCACAGA +
Preference number: 6 (lower is better)
Translates to: WHSQCLGCKDHL*SFQIPGLDLHR
Trigger: TCTGTGAAGGTCTAAGCCAGGAATCTGAAAACTGCACAGATGGTCTTTGCATCCTAGGCATTGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420357.5
ENST00000474634.1
CDS CCA 72 bp AGGATGCAAAGACCATCTGTGCAGTTTTCAGATTCCTaGCTTAGACCTTCACAGAATTTGCCCCCATTTCTC +
Preference number: 6 (lower is better)
Translates to: RMQRPSVQFSDS*LRPSQNLPPFL
Trigger: GAGAAATGGGGGCAAATTCTGTGAAGGTCTAAGCCAGGAATCTGAAAACTGCACAGATGGTCTTTGCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000453357.6
ENST00000474634.1
CDS TCA 72 bp TCCTCTTCTTTAAATGGATATTCCAATGCTCAGAACTaGCATCTGCACAGTGCGGGATGGTCAATGCAAAGG +
Preference number: 6 (lower is better)
Translates to: SSSLNGYSNAQN*HLHSAGWSMQR
Trigger: CCTTTGCATTGACCATCCCGCACTGTGCAGATGTCAGTTCTGAGCATTGGAATATCCATTTAAAGAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287272.6
ENST00000404895.7
ENST00000416672.5
ENST00000420357.5
ENST00000449677.1
ENST00000453357.6
CDS GCA 72 bp ATTCAAAAGAGCAACTCTACAACAACCCCTCATCGTTaGTCACCAGAAAGTAACACTATAGCAAGGGCTATG +
Preference number: 6 (lower is better)
Translates to: IQKSNSTTTPHR*SPESNTIARAM
Trigger: CATAGCCCTTGCTATAGTGTTACTTTCTGGTGAGCAACGATGAGGGGTTGTTGTAGAGTTGCTCTTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474634.1
CDS GCA 72 bp ATCACTACCTGCTTCAGTGCACTACCTAATTCTCATTaGTTAGAAATCCGAGCAGAAATTGACCTTGTCTAC +
Preference number: 6 (lower is better)
Translates to: ITTCFSALPNSH*LEIRAEIDLVY
Trigger: GTAGACAAGGTCAATTTCTGCTCGGATTTCTAAGCAATGAGAATTAGGTAGTGCACTGAAGCAGGTAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474634.1
CDS CAA 90 bp ATCTGTCTAGACTATAATGTCCCTGACTCAATGCTGACCTGTTGTTaGATAAACACTTACAGATCCAACAGATACTCTTCCCTCTTAGCA +
Preference number: 6 (lower is better)
Translates to: ICLDYNVPDSMLTCC*INTYRSNRYSSLLA
Trigger: TGCTAAGAGGGAAGAGTATCTGTTGGATCTGTAAGTGTTTATCAAACAACAGGTCAGCATTGAGTCAGGGACATTATAGTCTAGACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474634.1
CDS CAA 72 bp GACTATAATGTCCCTGACTCAATGCTGACCTGTTGTTaGATAAACACTTACAGATCCAACAGATACTCTTCC +
Preference number: 6 (lower is better)
Translates to: DYNVPDSMLTCC*INTYRSNRYSS
Trigger: GGAAGAGTATCTGTTGGATCTGTAAGTGTTTATCAAACAACAGGTCAGCATTGAGTCAGGGACATTATAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474634.1
CDS TCA 72 bp TGGGCTGGATACTTTAAGTATCATGTCAAAACATCATaGAAATCTCCTCTCTTCCAGCTAAAAGGAGGAACA +
Preference number: 6 (lower is better)
Translates to: WAGYFKYHVKTS*KSPLFQLKGGT
Trigger: TGTTCCTCCTTTTAGCTGGAAGAGAGGAGATTTTCATGATGTTTTGACATGATACTTAAAGTATCCAGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474634.1