RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC5CL (Homo sapiens)

Ensembl gene IDs: ENSG00000124602

Ensembl transcript IDs: ENST00000244565.8, ENST00000373164.1, ENST00000470102.1

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGGACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCGCGCCTaGTGCTGGGAGGCTGGCGAGGACGCGGGCGGCCCTGGCACCGTC +
Preference number: 1 (lower is better)
Translates to: EGTRTRDSSRPEGRA*CWEAGEDAGGPGTV
Trigger: GACGGTGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGTCCCCTC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp ACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCGCGCCTGCTGCTaGGAGGCTGGCGAGGACGCGGGCGGCCCTGGCACCGTCCGAGGG +
Preference number: 1 (lower is better)
Translates to: TRTRDSSRPEGRACC*EAGEDAGGPGTVRG
Trigger: CCCTCGGACGGTGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp GCGGGACAGCTCGCGGCCGGAAGGGCGCGCCTGCTGCTGGGAGGCTaGCGAGGACGCGGGCGGCCCTGGCACCGTCCGAGGGTTCTGGGA +
Preference number: 1 (lower is better)
Translates to: AGQLAAGRARLLLGG*RGRGRPWHRPRVLG
Trigger: TCCCAGAACCCTCGGACGGTGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCGGCCGCGAGCTGTCCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp AGGGCGCGCCTGCTGCTGGGAGGCTGGCGAGGACGCGGGCGGCCCTaGCACCGTCCGAGGGTTCTGGGAAGGGTGGTGGGCACAGCCAGG +
Preference number: 1 (lower is better)
Translates to: RARLLLGGWRGRGRP*HRPRVLGRVVGTAR
Trigger: CCTGGCTGTGCCCACCACCCTTCCCAGAACCCTCGGACGGTGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAGGCGCGCCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp GTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGCCATCTCCTaGGCTCCTGCGCCCTCTGCCGGCCAGGAGGGGACCCGCACGCGG +
Preference number: 1 (lower is better)
Translates to: VPWSVWQAGHAEAIS*APAPSAGQEGTRTR
Trigger: CCGCGTGCGGGTCCCCTCCTGGCCGGCAGAGGGCGCAGGAGCCCAGGAGATGGCCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp GGCCTGACCGGCCCTAAAGTGCACGCGGGGACCGTGGCCGTCCCCTaGTCAGTTTGGCAGGCTGGCCACGCTGAGGCCATCTCCTGGGCT +
Preference number: 1 (lower is better)
Translates to: GLTGPKVHAGTVAVP*SVWQAGHAEAISWA
Trigger: AGCCCAGGAGATGGCCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGTGCACTTTAGGGCCGGTCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp AGTAGAGGCAGAGGCAGCCAGCCAGGCGTGCCTAGCCGGGAAGCCTaGTCCTACCCCGGCCTCACACCCACGGGGATGGGCTCCCATGCC +
Preference number: 1 (lower is better)
Translates to: SRGRGSQPGVPSREA*SYPGLTPTGMGSHA
Trigger: GGCATGGGAGCCCATCCCCGTGGGTGTGAGGCCGGGGTAGGACCAGGCTTCCCGGCTAGGCACGCCTGGCTGGCTGCCTCTGCCTCTACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp GACGCGGGCGGCCCTGGCACCGTCCGAGGGTTCTGGGAAGGGTGGTaGGCACAGCCAGGAACAGCTGCTGTGTTCCTCTTAGGCGTAGGA +
Preference number: 1 (lower is better)
Translates to: DAGGPGTVRGFWEGW*AQPGTAAVFLLGVG
Trigger: TCCTACGCCTAAGAGGAACACAGCAGCTGTTCCTGGCTGTGCCCACCACCCTTCCCAGAACCCTCGGACGGTGCCAGGGCCGCCCGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR GCA 90 bp AGCCTGGTCCTACCCCGGCCTCACACCCACGGGGATGGGCTCCCATaGCCACTTTCGGCTCCTACCTTAAGTCCAGCCACCCTCTTCCCC +
Preference number: 1 (lower is better)
Translates to: SLVLPRPHTHGDGLP*PLSAPTLSPATLFP
Trigger: GGGGAAGAGGGTGGCTGGACTTAAGGTAGGAGCCGAAAGTGGGCATGGGAGCCCATCCCCGTGGGTGTGAGGCCGGGGTAGGACCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp CTAGCCGGGAAGCCTGGTCCTACCCCGGCCTCACACCCACGGGGATaGGCTCCCATGCCCACTTTCGGCTCCTACCTTAAGTCCAGCCAC +
Preference number: 1 (lower is better)
Translates to: LAGKPGPTPASHPRG*APMPTFGSYLKSSH
Trigger: GTGGCTGGACTTAAGGTAGGAGCCGAAAGTGGGCATGGGAGCCCATCCCCGTGGGTGTGAGGCCGGGGTAGGACCAGGCTTCCCGGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR GCA 90 bp AAGAGACAAAGGAAGTTAGTAGAGGCAGAGGCAGCCAGCCAGGCGTaGCTAGCCGGGAAGCCTGGTCCTACCCCGGCCTCACACCCACGG +
Preference number: 1 (lower is better)
Translates to: KRQRKLVEAEAASQA*LAGKPGPTPASHPR
Trigger: CCGTGGGTGTGAGGCCGGGGTAGGACCAGGCTTCCCGGCTAGGCACGCCTGGCTGGCTGCCTCTGCCTCTACTAACTTCCTTTGTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR GCA 90 bp CGTCCGAGGGTTCTGGGAAGGGTGGTGGGCACAGCCAGGAACAGCTaGTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCT +
Preference number: 1 (lower is better)
Translates to: RPRVLGRVVGTARNS*CVPLRRRRTTPLAP
Trigger: AGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCAGCTGTTCCTGGCTGTGCCCACCACCCTTCCCAGAACCCTCGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR TCA 90 bp CCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTaGAGCATTCTCGCTGCTCCAGCCCGCACTCAGCTCTTCCCCTCT +
Preference number: 1 (lower is better)
Translates to: PNHSANQILSPQHPP*SILAAPARTQLFPS
Trigger: AGAGGGGAAGAGCTGAGTGCGGGCTGGAGCAGCGAGAATGCTTCACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR GCA 90 bp AAATCAAATCCTCTCTCCCCAACATCCTCCGTGAAGCATTCTCGCTaGTCCAGCCCGCACTCAGCTCTTCCCCTCTCAACTCCTAAAGCC +
Preference number: 1 (lower is better)
Translates to: KSNPLSPTSSVKHSR*SSPHSALPLSTPKA
Trigger: GGCTTTAGGAGTTGAGAGGGGAAGAGCTGAGTGCGGGCTGGAGCAGCGAGAATGCTTCACGGAGGATGTTGGGGAGAGAGGATTTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR TCA 90 bp GCAGGGCTGTTTTCGAGTTTGCCCTTGGCTCCTATGAGCACATCTTaGCTCCTGCAAAAGAACTGTGTGCTTGTCAGGGCTCCAGACCCT +
Preference number: 1 (lower is better)
Translates to: AGLFSSLPLAPMSTS*LLQKNCVLVRAPDP
Trigger: AGGGTCTGGAGCCCTGACAAGCACACAGTTCTTTTGCAGGAGTCAAGATGTGCTCATAGGAGCCAAGGGCAAACTCGAAAACAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR TCA 90 bp CTAACCACAGGGCAGGGCTGTTTTCGAGTTTGCCCTTGGCTCCTATaGGCACATCTTGACTCCTGCAAAAGAACTGTGTGCTTGTCAGGG +
Preference number: 1 (lower is better)
Translates to: LTTGQGCFRVCPWLL*AHLDSCKRTVCLSG
Trigger: CCCTGACAAGCACACAGTTCTTTTGCAGGAGTCAAGATGTGCTCATAGGAGCCAAGGGCAAACTCGAAAACAGCCCTGCCCTGTGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp TATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCCATaGGGAAAATATCCCCACCCATCCATTCCTAGAGTAGCCCTGTCT +
Preference number: 1 (lower is better)
Translates to: YPYPLFPNPKLDLDP*GKYPHPSIPRVALS
Trigger: AGACAGGGCTACTCTAGGAATGGATGGGTGGGGATATTTTCCCCATGGATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 90 bp GAACAAATTAACAACACCTGTTTGCAAACAAAAGAATTTCCAGAATaGAGTCAAACCCTTTATTCTCTGTTCAGGACCCAGCCCATTCAT +
Preference number: 1 (lower is better)
Translates to: EQINNTCLQTKEFPE*SQTLYSLFRTQPIH
Trigger: ATGAATGGGCTGGGTCCTGAACAGAGAATAAAGGGTTTGACTCCATTCTGGAAATTCTTTTGTTTGCAAACAGGTGTTGTTAATTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR CCA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGCTGAGGCCATCTCCTaGGCTCCTGCGCCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSAEAIS*APAPSA
Trigger: GGCAGAGGGCGCAGGAGCCCAGGAGATGGCCTCAGC...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR CCA 90 bp TGGCAGAGAGAGAGGAAGACACGGCCTAAGCAGGAGGATAAAGAGACAAAGGAATGCACGCGGGGACCGTaGCCGTCCCCTGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: WQRERKTRPKQEDKETKECTRGP*PSPGQF
Trigger: AAACTGACCAGGGGACGGCCACGGTCCCCGCGTGCA...TTCCTTTGTCTCTTTATCCTCCTGCTTAGGCCGTGTCTTCCTCTCTCTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR GCA 90 bp ATGGGGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTCCGGAAGGGCGCGCCTaGTGCTGGGAGGCTGGCGAG +
Preference number: 2 (lower is better)
Translates to: MGCLFYPYPLFPNPKLDLPEGRA*CWEAGE
Trigger: CTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCGG...AAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CAA 90 bp GGCAGGGCTGTTTTCGAGTTTGCCCTTGGCTCCTATGAGCACATCTaGACTCCTGCAAAAGAACTGTGTGCTTGTCAGGGCTCCAGACCC +
Preference number: 2 (lower is better)
Translates to: GRAVFEFALGSYEHI*TPAKELCACQGSRP
Trigger: GGGTCTGGAGCCCTGACAAGCACACAGTTCTTTTGCAGGAGTCAAGATGTGCTCATAGGAGCCAAGGGCAAACTCGAAAACAGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR GCA 90 bp CTTAAGTCCAGCCACCCTCTTCCCCTACCCGCCCCTAAAGATCTCCAAACCACTACAGCCAGGAACAGCTaGTGTGTTCCTCTTAGGCGT +
Preference number: 2 (lower is better)
Translates to: LKSSHPLPLPAPKDLQTTTARNS*CVPLRR
Trigger: ACGCCTAAGAGGAACACAGCAGCTGTTCCTGGCTGT...AGTGGTTTGGAGATCTTTAGGGGCGGGTAGGGGAAGAGGGTGGCTGGACTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR GCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATGGGGATGGGCTCCCATaGCCACTTTCGGCTCCTACC +
Preference number: 2 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHGDGLP*PLSAPT
Trigger: GGTAGGAGCCGAAAGTGGGCATGGGAGCCCATCCCC...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR CCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGTCACACCCACGGGGATaGGCTCCCATGCCCACTTTC +
Preference number: 2 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGSHPRG*APMPTF
Trigger: GAAAGTGGGCATGGGAGCCCATCCCCGTGGGTGTGA...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR TCA 90 bp ATGGGGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTTTCCAGTATTCTTCATaGCACCAGCCCAATGCCCGG +
Preference number: 2 (lower is better)
Translates to: MGCLFYPYPLFPNPKLDLFQYSS*HQPNAR
Trigger: CCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAA...AAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR TCA 90 bp AAAGATCTCCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTCCTATGAGCACATCTTaGCTCCTGCAAAAGAACTGT +
Preference number: 2 (lower is better)
Translates to: KDLQTTRQIKSSLPNILRPMSTS*LLQKNC
Trigger: ACAGTTCTTTTGCAGGAGTCAAGATGTGCTCATAGG...ACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGGAGATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR TCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCCCCAACATCCTCCGTaGAGCATTCTCGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGPQHPP*SILAAP
Trigger: TGGAGCAGCGAGAATGCTTCACGGAGGATGTTGGGG...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR TCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACAGAATACTTTAGGGCCTaGCCGGCCCTAAAGTGCACG +
Preference number: 2 (lower is better)
Translates to: ETRQKQKDLRQRERVTETEYFRA*PALKCT
Trigger: CGTGCACTTTAGGGCCGGTCAGGCCCTAAAGTATTC...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR TCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACATGCCCTTGGCTCCTATaGGCACATCTTGACTCCTGC +
Preference number: 2 (lower is better)
Translates to: ETRQKQKDLRQRERVTETCPWLL*AHLDSC
Trigger: GCAGGAGTCAAGATGTGCTCATAGGAGCCAAGGGCA...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR GCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACACCCGGTCTTCCTAAGTaGTCAGTGAATACTTTAGGG +
Preference number: 2 (lower is better)
Translates to: ETRQKQKDLRQRERVTETPGLPK*SVNTLG
Trigger: CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGG...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CAA 90 bp CAGAGAGATTGTTTGCCTGCCTTTGAACAAATTAACAACACCTGTTaGCAAACAAAAGAATTTCCAGAATGGAGTCAAACCCTTTATTCT +
Preference number: 2 (lower is better)
Translates to: QRDCLPAFEQINNTC*QTKEFPEWSQTLYS
Trigger: AGAATAAAGGGTTTGACTCCATTCTGGAAATTCTTTTGTTTGCAAACAGGTGTTGTTAATTTGTTCAAAGGCAGGCAAACAATCTCTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CAA 90 bp AATACAGAAGAAAATTGTGTTGCCAGAGAGATTGTTTGCCTGCCTTaGAACAAATTAACAACACCTGTTTGCAAACAAAAGAATTTCCAG +
Preference number: 2 (lower is better)
Translates to: NTEENCVAREIVCLP*NKLTTPVCKQKNFQ
Trigger: CTGGAAATTCTTTTGTTTGCAAACAGGTGTTGTTAATTTGTTCAAAGGCAGGCAAACAATCTCTCTGGCAACACAATTTTCTTCTGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 72 bp CTGCTGCTGGGAGGCTGGCGAGGACGCGGGCGGCCCTaGCACCGTCCGAGGGTTCTGGGAAGGGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LLLGGWRGRGRP*HRPRVLGRVVG
Trigger: GCCCACCACCCTTCCCAGAACCCTCGGACGGTGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 72 bp AGAGGCAGCCAGCCAGGCGTGCCTAGCCGGGAAGCCTaGTCCTACCCCGGCCTCACACCCACGGGGATGGGC +
Preference number: 3 (lower is better)
Translates to: RGSQPGVPSREA*SYPGLTPTGMG
Trigger: GCCCATCCCCGTGGGTGTGAGGCCGGGGTAGGACCAGGCTTCCCGGCTAGGCACGCCTGGCTGGCTGCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 72 bp GGCCCTAAAGTGCACGCGGGGACCGTGGCCGTCCCCTaGTCAGTTTGGCAGGCTGGCCACGCTGAGGCCATC +
Preference number: 3 (lower is better)
Translates to: GPKVHAGTVAVP*SVWQAGHAEAI
Trigger: GATGGCCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGTGCACTTTAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR GCA 72 bp CTACCCCGGCCTCACACCCACGGGGATGGGCTCCCATaGCCACTTTCGGCTCCTACCTTAAGTCCAGCCACC +
Preference number: 3 (lower is better)
Translates to: LPRPHTHGDGLP*PLSAPTLSPAT
Trigger: GGTGGCTGGACTTAAGGTAGGAGCCGAAAGTGGGCATGGGAGCCCATCCCCGTGGGTGTGAGGCCGGGGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR GCA 72 bp AGGAAGTTAGTAGAGGCAGAGGCAGCCAGCCAGGCGTaGCTAGCCGGGAAGCCTGGTCCTACCCCGGCCTCA +
Preference number: 3 (lower is better)
Translates to: RKLVEAEAASQA*LAGKPGPTPAS
Trigger: TGAGGCCGGGGTAGGACCAGGCTTCCCGGCTAGGCACGCCTGGCTGGCTGCCTCTGCCTCTACTAACTTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR GCA 72 bp CCTCTCTCCCCAACATCCTCCGTGAAGCATTCTCGCTaGTCCAGCCCGCACTCAGCTCTTCCCCTCTCAACT +
Preference number: 3 (lower is better)
Translates to: PLSPTSSVKHSR*SSPHSALPLST
Trigger: AGTTGAGAGGGGAAGAGCTGAGTGCGGGCTGGAGCAGCGAGAATGCTTCACGGAGGATGTTGGGGAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR TCA 72 bp GGGCAGGGCTGTTTTCGAGTTTGCCCTTGGCTCCTATaGGCACATCTTGACTCCTGCAAAAGAACTGTGTGC +
Preference number: 3 (lower is better)
Translates to: GQGCFRVCPWLL*AHLDSCKRTVC
Trigger: GCACACAGTTCTTTTGCAGGAGTCAAGATGTGCTCATAGGAGCCAAGGGCAAACTCGAAAACAGCCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR CAA 90 bp CTTAAGTCCAGCCACCCTCTTCCCCTACCCGCCCCTAAAGATCTCCAAACCACTTTTTCGAGTTTGCCCTaGGCTCCTATGAGCACATCT +
Preference number: 3 (lower is better)
Translates to: LKSSHPLPLPAPKDLQTTFSSLP*APMSTS
Trigger: AGATGTGCTCATAGGAGCCAAGGGCAAACTCGAAAA...AGTGGTTTGGAGATCTTTAGGGGCGGGTAGGGGAAGAGGGTGGCTGGACTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR CAA 90 bp AAAGATCTCCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTAAAAGAACTGTGTGCTaGTCAGGGCTCCAGACCCTA +
Preference number: 3 (lower is better)
Translates to: KDLQTTRQIKSSLPNILRKRTVC*SGLQTL
Trigger: TAGGGTCTGGAGCCCTGACAAGCACACAGTTCTTTT...ACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGGAGATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR-3UTR CAA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACAGGGCTGTTTTCGAGTTaGCCCTTGGCTCCTATGAGC +
Preference number: 3 (lower is better)
Translates to: ETRQKQKDLRQRERVTETGLFSS*PLAPMS
Trigger: GCTCATAGGAGCCAAGGGCAAACTCGAAAACAGCCC...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR TCA 72 bp GAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTaGAACACAGGTGCAGAGCGGGAACAACTGTGGGAG +
Preference number: 3 (lower is better)
Translates to: ETKRSKTERESN*NTGAEREQLWE
Trigger: CTCCCACAGTTGTTCCCGCTCTGCACCTGTGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CCA 72 bp CCTTTATTTCCCAACCCTAAACTGGATCTTGATCCATaGGGAAAATATCCCCACCCATCCATTCCTAGAGTA +
Preference number: 3 (lower is better)
Translates to: PLFPNPKLDLDP*GKYPHPSIPRV
Trigger: TACTCTAGGAATGGATGGGTGGGGATATTTTCCCCATGGATCAAGATCCAGTTTAGGGTTGGGAAATAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CCTCTGCCGGCCAGGAGGGGACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCGGACGCGGGCGGCCCTaGCACCGTCCGAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLPARRGPARGTARGRKGGRGRP*HRPRVL
Trigger: CAGAACCCTCGGACGGTGCCAGGGCCGCCCGCGTCC...GCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGTCCCCTCCTGGCCGGCAGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CGGAAGGGCGCGCCTGCTGCTGGGAGGCTGGCGAGGACGCGGGCGGCCCTGGCAGCTGCGGGGCTGCGCTaGCAGGACAGGAACCGGATC +
Preference number: 4 (lower is better)
Translates to: RKGAPAAGRLARTRAALAAAGLR*QDRNRI
Trigger: GATCCGGTTCCTGTCCTGCCAGCGCAGCCCCGCAGC...TGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CCTCTGCCGGCCAGGAGGGGACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCTCCGGCCCTGCCCGCTaGGCGCTCAGAGCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PLPARRGPARGTARGRKGSGPAR*ALRASR
Trigger: ACGAGAAGCTCTGAGCGCCCAGCGGGCAGGGCCGGA...GCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGTCCCCTCCTGGCCGGCAGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CGGAAGGGCGCGCCTGCTGCTGGGAGGCTGGCGAGGACGCGGGCGGCCCTGGCACATGGGGCTGCTCGTTaGTCAGTGCCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RKGAPAAGRLARTRAALAHGAAR*SVPTAG
Trigger: CCCTGCAGTGGGCACTGACCAACGAGCAGCCCCATG...TGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGAGGCAACCGCCGCGGTaGTCCACCTCTCGAGCCGAA +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRRQPPR*STSRAE
Trigger: TTCGGCTCGAGAGGTGGATCACCGCGGCGGTTGCCT...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGCGCCCACCATGGGGCTaGTCGTTGGTCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRRPPWG*SLVSAH
Trigger: GTGGGCACTGACCAACGAGCAGCCCCATGGTGGGCG...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CGGAAGGGCGCGCCTGCTGCTGGGAGGCTGGCGAGGACGCGGGCGGCCCTGGCACACAGCCACAGCACCTaGTGGGATGAGCAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RKGAPAAGRLARTRAALAHSHST*WDEQGD
Trigger: ATCTCCTTGCTCATCCCACCAGGTGCTGTGGCTGTG...TGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp CGGAAGGGCGCGCCTGCTGCTGGGAGGCTGGCGAGGACGCGGGCGGCCCTGGCACCAGGATTCCTCCTCTaGTGCCTGGAATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RKGAPAAGRLARTRAALAPGFLL*CLESED
Trigger: ATCCTCAGATTCCAGGCATCAGAGGAGGAATCCTGG...TGCCAGGGCCGCCCGCGTCCTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp CCTCTGCCGGCCAGGAGGGGACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCGAGAGAGAGAGTAACTaGAACACAGGTGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: PLPARRGPARGTARGRKGERESN*NTGAER
Trigger: CCGCTCTGCACCTGTGTTTCAGTTACTCTCTCTCTC...GCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGTCCCCTCCTGGCCGGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp CCTCTGCCGGCCAGGAGGGGACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCACAGCCAGGAACAGCTaGTGTGTTCCTCTTAGGCGT +
Preference number: 4 (lower is better)
Translates to: PLPARRGPARGTARGRKGTARNS*CVPLRR
Trigger: ACGCCTAAGAGGAACACAGCAGCTGTTCCTGGCTGT...GCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGTCCCCTCCTGGCCGGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp CCTCTGCCGGCCAGGAGGGGACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCATGACACCAGCCCAATaGCCGGTCTTCCTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: PLPARRGPARGTARGRKGMTPAQ*PVFLSA
Trigger: AGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCAT...GCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGTCCCCTCCTGGCCGGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGGGGGATGGGCTCCCATaGCCACTTTCGGCTCCTACC +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRGDGLP*PLSAPT
Trigger: GGTAGGAGCCGAAAGTGGGCATGGGAGCCCATCCCC...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CCTCTGCCGGCCAGGAGGGGACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCTGGAATGAACTCTCCTaGGGGCACATTCGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLPARRGPARGTARGRKGWNELS*GHIRLV
Trigger: AACCAGGCGAATGTGCCCCCAGGAGAGTTCATTCCA...GCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGTCCCCTCCTGGCCGGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGAAAGACACCCGCTCCTaGCGGCCCACAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRKDTRS*RPTATA
Trigger: TGCTGTGGCTGTGGGCCGCCAGGAGCGGGTGTCTTT...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGAGGAAGGAGGCCCCATaGGGGCCACATGCCACCACA +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRRKEAP*GPHATT
Trigger: TGTGGTGGCATGTGGCCCCCATGGGGCCTCCTTCCT...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGGGGCAGCCTATTGCATaGGGGCGGCTGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRGQPIA*GRLGNR
Trigger: CCTGTTTCCCAGCCGCCCCCATGCAATAGGCTGCCC...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGGGGGGCACATTCGCCTaGTTACTCAATGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRGGTFA*LLNAAG
Trigger: GCCAGCGGCATTGAGTAACCAGGCGAATGTGCCCCC...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGTCAGGTAGTTCTGGATaGCGGAGGCGCAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRSGSSG*RRRSLA
Trigger: GGCTAGACTGCGCCTCCGCCATCCAGAACTACCTGA...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGCCCGGTCTTCCTAAGTaGTCAGTGAATACTTTAGGG +
Preference number: 4 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRPGLPK*SVNTLG
Trigger: CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGG...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCCTGGGGGCAGCCTATTaGATGGGGGCGGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLLGAAY*MGAAGK
Trigger: TTTCCCAGCCGCCCCCATGCAATAGGCTGCCCCCAG...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCGCAGGCGCCCACCATaGGGCTGCTCGTTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPRRRPP*GCSLVS
Trigger: ACTGACCAACGAGCAGCCCCATGGTGGGCGCCTGCG...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGGCTCGGGGCCTGGGCTaGCGCCGTGTGTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGARGLG*RRVSHS
Trigger: TGAGTGGGACACACGGCGGCAGCCCAGGCCCCGAGC...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCAAACAACTCCAGGATaGCCGCTGCGGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPQTTPG*PLRGCA
Trigger: AGCGCAGCCCCGCAGCGGCCATCCTGGAGTTGTTTG...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCCCCCAACATCCTCCGTaGAGCATTCTCGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLPQHPP*SILAAP
Trigger: TGGAGCAGCGAGAATGCTTCACGGAGGATGTTGGGG...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCCGCCTGGTTACTCAATaGCGCTGGCTCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLRLVTQ*RWLSFT
Trigger: GGTGAAGGAGAGCCAGCGGCATTGAGTAACCAGGCG...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCAGCCTTCTAGGGCAGTaGCATCGAAGGCATTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLSLLGQ*HRRHWA
Trigger: GGCCCAATGCCTTCGATGGCACTGCCCTAGAAGGCT...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCCGAGCATGGCTGGGCTaGTCGGCACAGTGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLRAWLG*SAQCLN
Trigger: GTTCAAACACTGTGCCGAGCAGCCCAGCCATGCTCG...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCCATCTCTGGCAGTGTaGCTGGCAGGTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPPSLAV*LAGAAL
Trigger: CAAGGCAGCACCTGCCAGCCACACTGCCAGAGATGG...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCTCAACTGGCGGACCATaGTCTGGCCTTGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLSTGGP*SGLEWV
Trigger: CACCCACTCAAGGCCAGACCATGGTCCGCCAGTTGA...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCCTCTGAGATGTACGTaGGCTTCAGGCACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPPLRCT*ASGTGR
Trigger: GCGACCAGTGCCTGAAGCTCACGTACATCTCAGAGG...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTTGTTGCTGCTGTAGGTaGGAGCATGGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPCCCCR*EHGWAA
Trigger: AGCAGCCCAGCCATGCTCGCACCTACAGCAGCAACA...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGCTGCTCGTTGGTCAGTaGCCACTGCAGGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGLLVGQ*PLQGAG
Trigger: CCCTGCGCCCTGCAGTGGGCACTGACCAACGAGCAG...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGGGGCTTACCAGCCCCTaGGCTTGGGACAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGGLTSP*AWDSDG
Trigger: CCCATCGCTGTCCCAAGCCCAGGGGCTGGTAAGCCC...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCTGAAGTGGGAGAGGTaGATGCGACACTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPLKWER*MRHSSR
Trigger: CCGGGATGAGTGTCGCATCCACCTCTCCCACTTCAG...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCGCCAGTCATTGCCGGTaGTGCTGTTTGGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLASHCR*CCLAPI
Trigger: TATTGGAGCCAAACAGCATCACCGGCAATGACTGGC...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp AAAGATCTCCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTGCAGCCAGCCAGGCGTaGCTAGCCGGGAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KDLQTTRQIKSSLPNILRAASQA*LAGKPG
Trigger: ACCAGGCTTCCCGGCTAGGCACGCCTGGCTGGCTGC...ACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGGAGATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTTTAGAGGCTGCTGGCTaGTCCAGTTCCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPLEAAG*SSSFSE
Trigger: CTCGGAGAAGGAACTGGACCAGCCAGCAGCCTCTAA...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCTGCCATCGAAGGCATTaGGCCAGAAGGAGGACACTT +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLCHRRH*ARRRTL
Trigger: AAGTGTCCTCCTTCTGGCCCAATGCCTTCGATGGCA...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGTTGAAGTCGAAGAGCTaGCAGGGCCCACGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGLKSKS*QGPRRR
Trigger: GCGCCTGCGTGGGCCCTGCCAGCTCTTCGACTTCAA...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGCGGCTGGGAAACAGGTaGTGGCGCTGCCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGRLGNR*WRCPGF
Trigger: GAATCCTGGGCAGCGCCACCACCTGTTTCCCAGCCG...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGTTCGCGCCCCACAGGTaGCTCCAGCACACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGFAPHR*LQHTGV
Trigger: TACACCTGTGTGCTGGAGGCACCTGTGGGGCGCGAA...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp TGGCAGAGAGAGAGGAAGACACGGCCTAAGCAGGAGGATAAAGAGACAAAGGAATTGGTCAGTGCCCACTaGAGGGCGCAGGGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: WQRERKTRPKQEDKETKELVSAH*RAQGVL
Trigger: CAACACGCCCTGCGCCCTGCAGTGGGCACTGACCAA...TTCCTTTGTCTCTTTATCCTCCTGCTTAGGCCGTGTCTTCCTCTCTCTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp CTTAAGTCCAGCCACCCTCTTCCCCTACCCGCCCCTAAAGATCTCCAAACCACTTGCAGGCTGCCGTTCTaGTCCTCAAACAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKSSHPLPLPAPKDLQTTCRLPF*SSNNSR
Trigger: CCTGGAGTTGTTTGAGGAGCAGAACGGCAGCCTGCA...AGTGGTTTGGAGATCTTTAGGGGCGGGTAGGGGAAGAGGGTGGCTGGACTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp AAAGATCTCCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTGGCTTGGGACAGCGATaGGGCGTCCGACAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KDLQTTRQIKSSLPNILRGLGQR*GVRQVP
Trigger: TGGGACCTGTCGGACGCCCCATCGCTGTCCCAAGCC...ACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGGAGATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGGTGAGCTTCAGGCACTaGTCGCCCCTAGCCCCATTG +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGVSFRH*SPLAPL
Trigger: CAATGGGGCTAGGGGCGACCAGTGCCTGAAGCTCAC...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp TGGCAGAGAGAGAGGAAGACACGGCCTAAGCAGGAGGATAAAGAGACAAAGGAAAGTGGGAGAGGTGGATaGGACACTCATCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: WQRERKTRPKQEDKETKESGRGG*DTHPGR
Trigger: CCTCCCGGGATGAGTGTCGCATCCACCTCTCCCACT...TTCCTTTGTCTCTTTATCCTCCTGCTTAGGCCGTGTCTTCCTCTCTCTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATTCCAGCTCCAGGCCCTaGTTATCCCGGGCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHSSSRP*LSRAPP
Trigger: CGGGGGCGCCCGGGATAACCAGGGCCTGGAGCTGGA...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCCCTATGAGCACATCTTaGCTCCTGCAAAAGAACTGT +
Preference number: 4 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLPMSTS*LLQKNC
Trigger: ACAGTTCTTTTGCAGGAGTCAAGATGTGCTCATAGG...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGGAACCGGATCTTCATaGCGCAAAGCCCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSGTGSS*RKAPGG
Trigger: CCCACCTGGGGCTTTGCGGCATGAAGATCCGGTTCC...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCACCTCCTCCGGCCCTaGCCGCTGGGCGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGHLLRP*PLGAQS
Trigger: GCTCTGAGCGCCCAGCGGGCAGGGCCGGAGGAGGTG...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACACCGGAAGGGCGCGCCTaGTGCTGGGAGGCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETPEGRA*CWEAGE
Trigger: CTCGCCAGCCTCCCAGCAGCAGGCGCGCCCTTCCGG...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGGTTACTCAATGCCGCTaGCTCTCCTTCACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGVTQCR*LSFTPV
Trigger: CACAGGGGTGAAGGAGAGCCAGCGGCATTGAGTAAC...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCCCGCAAAGCCCCAGGTaGGAGGCCAGTCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GASFIPILYFPTLNWILIPQSPR*EASLRQ
Trigger: CTGGCGCAGACTGGCCTCCCACCTGGGGCTTTGCGG...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATGCTGAGGCCATCTCCTaGGCTCCTGCGCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHAEAIS*APAPSA
Trigger: GGCAGAGGGCGCAGGAGCCCAGGAGATGGCCTCAGC...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp TGGCAGAGAGAGAGGAAGACACGGCCTAAGCAGGAGGATAAAGAGACAAAGGAATGCCCTTGGCTCCTATaGGCACATCTTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: WQRERKTRPKQEDKETKECPWLL*AHLDSC
Trigger: GCAGGAGTCAAGATGTGCTCATAGGAGCCAAGGGCA...TTCCTTTGTCTCTTTATCCTCCTGCTTAGGCCGTGTCTTCCTCTCTCTCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGAGTGTGGCTGGCAGGTaGTGCCTTGAGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGSVAGR*CLETSF
Trigger: AAATGAGGTCTCAAGGCAGCACCTGCCAGCCACACT...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp CTTAAGTCCAGCCACCCTCTTCCCCTACCCGCCCCTAAAGATCTCCAAACCACTAACACCAACAGTTTGTaGATCAACTGGCGGACCATG +
Preference number: 4 (lower is better)
Translates to: LKSSHPLPLPAPKDLQTTNTNSL*INWRTM
Trigger: CATGGTCCGCCAGTTGATGCACAAACTGTTGGTGTT...AGTGGTTTGGAGATCTTTAGGGGCGGGTAGGGGAAGAGGGTGGCTGGACTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp AAAGATCTCCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTGTGAAGCATTCTCGCTaGTCCAGCCCGCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: KDLQTTRQIKSSLPNILRVKHSR*SSPHSA
Trigger: AGCTGAGTGCGGGCTGGAGCAGCGAGAATGCTTCAC...ACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGGAGATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTGGATTTCCATATACTTaGTCTCCAAGCCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPGFPYT*SPSHPG
Trigger: TCCAGGATGGCTTGGAGACCAAGTATATGGAAATCC...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ATGGGGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTCCTAGCCGGGAAGCCTaGTCCTACCCCGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: MGCLFYPYPLFPNPKLDLPSREA*SYPGLT
Trigger: TGTGAGGCCGGGGTAGGACCAGGCTTCCCGGCTAGG...AAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATTCCTGGCACCAGCGGTaGGCAGAATACGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHSWHQR*AEYGQL
Trigger: CAGCTGGCCGTATTCTGCTCACCGCTGGTGCCAGGA...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp CATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGTGAATACTTTAGGGATTCTCCCAACCCTCTaGGATGTACGTGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HDTSPMPGLPKCSVNTLGILPTL*DVRELQ
Trigger: CTGAAGCTCACGTACATCTCAGAGGGTTGGGAGAAT...CCCTAAAGTATTCACTGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp ATGGGGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTCCCATGGGGGCCACATaGCACCACAGGGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: MGCLFYPYPLFPNPKLDLPMGAT*HHRAYQ
Trigger: CTGGTAAGCCCTGTGGTGGCATGTGGCCCCCATGGG...AAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGCTCTTAGAGGCTGCTaGCTGGTCCAGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSALRGC*LVQFLL
Trigger: GAGAAGGAACTGGACCAGCCAGCAGCCTCTAAGAGC...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCTTGCATGGGGGCGGCTaGGAAACAGGTGGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: GASFIPILYFPTLNWILILHGGG*ETGGGA
Trigger: AGCGCCACCACCTGTTTCCCAGCCGCCCCCATGCAA...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATGTCCCCTGGTCAGTTTaGCAGGCTGGCCACGCTGAG +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHVPWSV*QAGHAE
Trigger: CTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGAC...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp AAAGATCTCCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTGTGGCTGGCAGGTGCTaGCTTGAGACCTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: KDLQTTRQIKSSLPNILRVAGRC*LETSFS
Trigger: AGAAAATGAGGTCTCAAGGCAGCACCTGCCAGCCAC...ACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGGAGATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACACCAGCTGCAGCCATTTaGGGGCTTCGCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETPAAAI*GLRAPQ
Trigger: CTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGG...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAAAGGGGCACTTTCCATaGCAGATGTGGAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSKGHFP*QMWRWG
Trigger: TCCCCATCTCCACATCTGGCATGGAAAGTGCCCCTT...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TGGCAGAGAGAGAGGAAGACACGGCCTAAGCAGGAGGATAAAGAGACAAAGGAAACCTCATTTTCTAGTTaGGGGGTAGGCTGGGACACT +
Preference number: 4 (lower is better)
Translates to: WQRERKTRPKQEDKETKETSFSS*GVGWDT
Trigger: AGTGTCCCAGCCTACCCCCCAACTAGAAAATGAGGT...TTCCTTTGTCTCTTTATCCTCCTGCTTAGGCCGTGTCTTCCTCTCTCTCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCAGGTGCGAGCATGGCTaGGCTGCTCGGCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: GASFIPILYFPTLNWILIRCEHG*AARHSV
Trigger: AACACTGTGCCGAGCAGCCCAGCCATGCTCGCACCT...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAAGATGGGGAACCAGCTaGCAACTGCTGTCATCCACA +
Preference number: 4 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSRWGTS*QLLSST
Trigger: TGTGGATGACAGCAGTTGCCAGCTGGTTCCCCATCT...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACAACCGTGGCCGTCCCCTaGTCAGTTTGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETTVAVP*SVWQAG
Trigger: GCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGT...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACATGCACGCGGGGACCGTaGCCGTCCCCTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETCTRGP*PSPGQF
Trigger: AAACTGACCAGGGGACGGCCACGGTCCCCGCGTGCA...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244565.8
3UTR CAA 72 bp GTTTTCGAGTTTGCCCTTGGCTCCTATGAGCACATCTaGACTCCTGCAAAAGAACTGTGTGCTTGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VFEFALGSYEHI*TPAKELCACQG
Trigger: GCCCTGACAAGCACACAGTTCTTTTGCAGGAGTCAAGATGTGCTCATAGGAGCCAAGGGCAAACTCGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATCAGAATACGGCCAGCTaGAGCCATTTGCGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHQNTAS*SHLRAS
Trigger: CGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTCTG...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCGCAGCTCCTGCAGGCTaGCGTTCTGCTCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: GASFIPILYFPTLNWILIAAPAG*RSAPQT
Trigger: TGTTTGAGGAGCAGAACGGCAGCCTGCAGGAGCTGC...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCATGCAAAAGAACTGTGTaGTTGTCAGGGCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSCKRTV*LSGLQT
Trigger: GGTCTGGAGCCCTGACAAGCACACAGTTCTTTTGCA...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATAGCCACAGCACCTGGTaGGATGAGCAAGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHSHSTW*DEQGDA
Trigger: GGCATCTCCTTGCTCATCCCACCAGGTGCTGTGGCT...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGACCGTCCGAGGGTTCTaGGAAGGGTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGTVRGF*EGWWAQ
Trigger: CTGTGCCCACCACCCTTCCCAGAACCCTCGGACGGT...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAGAGCGGGAACAACTGTaGGAGACAGGGACAGAAAAA +
Preference number: 4 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSEREQL*ETGTEK
Trigger: TTTTTCTGTCCCTGTCTCCCACAGTTGTTCCCGCTC...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACACAGAAGGAGGACACTTaGCACTGGGACCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETQKEDT*HWDPHQ
Trigger: CTGGTGGGGGTCCCAGTGGCAAGTGTCCTCCTTCTG...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATATACGCAGTTGCAGATaGGACTGTCCTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHIRSCR*DCPGTS
Trigger: GCTGGTGCCAGGACAGTCCCATCTGCAACTGCGTAT...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGAAACAGGTGGTaGCGCTGCCCAGGATTCCTC +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGLGNRW*RCPGFL
Trigger: GAGGAATCCTGGGCAGCGCCACCACCTGTTTCCCAG...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCCTGCTCAAAGAGCTCTaGGGGCAGCCTATTGCATGG +
Preference number: 4 (lower is better)
Translates to: GASFIPILYFPTLNWILILLKEL*GQPIAW
Trigger: CCATGCAATAGGCTGCCCCCAGAGCTCTTTGAGCAG...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACATCACACCCACGGGGATaGGCTCCCATGCCCACTTTC +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETSHPRG*APMPTF
Trigger: GAAAGTGGGCATGGGAGCCCATCCCCGTGGGTGTGA...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCGACACTGGTTCCTCTTaGCCATTCAGTGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GASFIPILYFPTLNWILIDTGSS*PFSVQQ
Trigger: CTGCTGGACACTGAATGGTCAAGAGGAACCAGTGTC...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCACAGGTGTAGAGGCTaGAGTGGGAGAGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGHRCRG*SGRGGC
Trigger: GCATCCACCTCTCCCACTTCAGCCTCTACACCTGTG...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCACTGATGCCTGGAATCTaGGGATTTCCATATACTTGG +
Preference number: 4 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSLMPGI*GFPYTW
Trigger: CCAAGTATATGGAAATCCTCAGATTCCAGGCATCAG...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATTTCCAGTATTCTTCATaGCACCAGCCCAATGCCCGG +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHFQYSS*HQPNAR
Trigger: CCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAA...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCGAACCAGCTGGCAACTaGTGTCATCCACATTCTCCC +
Preference number: 4 (lower is better)
Translates to: GASFIPILYFPTLNWILIEPAGN*CHPHSP
Trigger: GGGAGAATGTGGATGACAGCAGTTGCCAGCTGGTTC...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCGGTAGGCTGGGACACTaGTTCCTCTTGACCATTCAG +
Preference number: 4 (lower is better)
Translates to: GASFIPILYFPTLNWILIGRLGH*FLLTIQ
Trigger: CTGAATGGTCAAGAGGAACCAGTGTCCCAGCCTACC...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ATGGGGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTAGTTTGTGCATCAACTaGCGGACCATGGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MGCLFYPYPLFPNPKLDLSLCIN*RTMVWP
Trigger: AGGCCAGACCATGGTCCGCCAGTTGATGCACAAACT...AAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGGAGATGCCTGTATCCTaGAGCATCAGGCAACCGCCG +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGEMPVS*SIRQPP
Trigger: CGGCGGTTGCCTGATGCTCCAGGATACAGGCATCTC...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATTTTCCATGCCAGATGTaGAGATGGGGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHFPCQM*RWGTSW
Trigger: CCAGCTGGTTCCCCATCTCCACATCTGGCATGGAAA...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp AAAGATCTCCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTTTCCCAACCCTAAACTaGATCTTGATCCATGGGGAA +
Preference number: 4 (lower is better)
Translates to: KDLQTTRQIKSSLPNILRFPTLN*ILIHGE
Trigger: TTCCCCATGGATCAAGATCCAGTTTAGGGTTGGGAA...ACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGGAGATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACACAGCACCTGGTGGGATaGGCAAGGAGATGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETQHLVG*ARRCLY
Trigger: ATACAGGCATCTCCTTGCTCATCCCACCAGGTGCTG...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR TCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGGAATACTTTAGGGCCTaGCCGGCCCTAAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGEYFRA*PALKCT
Trigger: CGTGCACTTTAGGGCCGGTCAGGCCCTAAAGTATTC...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGGGAGCTCTTAGAGGCTaGTGGCTGGTCCAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGGALRG*WLVQFL
Trigger: AAGGAACTGGACCAGCCAGCAGCCTCTAAGAGCTCC...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGAGGAACTGGGAGGGTTaGAATGAACTCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGRNWEG*NELSWG
Trigger: CCCCCAGGAGAGTTCATTCCAACCCTCCCAGTTCCT...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACATGGTCTGGCCTTGAGTaGGTGTGTGTAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETWSGLE*VCVAPG
Trigger: ACCAGGAGCTACACACACCCACTCAAGGCCAGACCA...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGTGCCAGATGTGGAGATaGGGAACCAGCTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGCQMWR*GTSWQL
Trigger: CAGTTGCCAGCTGGTTCCCCATCTCCACATCTGGCA...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACAGTCTCCAAGCCATCCTaGAAGGTGTGCATGGTGACA +
Preference number: 4 (lower is better)
Translates to: ETRQKQKDLRQRERVTETVSKPS*KVCMVT
Trigger: TGTCACCATGCACACCTTCCAGGATGGCTTGGAGAC...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATGCACATCTTGACTCCTaGAAAAGAACTGTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHAHLDS*KRTVCL
Trigger: CAAGCACACAGTTCTTTTGCAGGAGTCAAGATGTGC...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR GCA 90 bp ATGGGGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGCCAGAGAGATTGTTTaGCTGCCTTTGAACAAATTA +
Preference number: 4 (lower is better)
Translates to: MGCLFYPYPLFPNPKLDLAREIV*LPLNKL
Trigger: TAATTTGTTCAAAGGCAGGCAAACAATCTCTCTGGC...AAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CCA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGTATCTGCTGACTGAATaGGGTGCCTCTTTTATCCCT +
Preference number: 4 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGYLLTE*GASFIP
Trigger: AGGGATAAAAGAGGCACCCCATTCAGTCAGCAGATA...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS CCA 90 bp CCCTGCCCGCTGGGCGCTCAGAGCTTCTCGTCCAGCTCCAGGCCCTaGTTATCCCGGGCGCCCCCGCGCTCGGGGCCTGGGCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PCPLGAQSFSSSSRP*LSRAPPRSGPGLPP
Trigger: CGGCGGCAGCCCAGGCCCCGAGCGCGGGGGCGCCCGGGATAACCAGGGCCTGGAGCTGGACGAGAAGCTCTGAGCGCCCAGCGGGCAGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS GCA 90 bp CCAGGCCCTGGTTATCCCGGGCGCCCCCGCGCTCGGGGCCTGGGCTaGCGCCGTGTGTCCCACTCAGGTAGTTCTGGATGGCGGAGGCGC +
Preference number: 5 (lower is better)
Translates to: PGPGYPGRPRARGLG*RRVSHSGSSGWRRR
Trigger: GCGCCTCCGCCATCCAGAACTACCTGAGTGGGACACACGGCGGCAGCCCAGGCCCCGAGCGCGGGGGCGCCCGGGATAACCAGGGCCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CCA 90 bp CAGCTCCAGGCCCTGGTTATCCCGGGCGCCCCCGCGCTCGGGGCCTaGGCTGCCGCCGTGTGTCCCACTCAGGTAGTTCTGGATGGCGGA +
Preference number: 5 (lower is better)
Translates to: QLQALVIPGAPALGA*AAAVCPTQVVLDGG
Trigger: TCCGCCATCCAGAACTACCTGAGTGGGACACACGGCGGCAGCCCAGGCCCCGAGCGCGGGGGCGCCCGGGATAACCAGGGCCTGGAGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS GCA 90 bp GGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCCGGCCCTaGCCGCTGGGCGCTCAGAGCTTCTCGTCCAGCTCCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GVGEQPLSPLHLLRP*PLGAQSFSSSSRPW
Trigger: CCAGGGCCTGGAGCTGGACGAGAAGCTCTGAGCGCCCAGCGGGCAGGGCCGGAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS CCA 90 bp CCATTGAAGTCGAAGAGCTGGCAGGGCCCACGCAGGCGCCCACCATaGGGCTGCTCGTTGGTCAGTGCCCACTGCAGGGCGCAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: PLKSKSWQGPRRRPP*GCSLVSAHCRAQGV
Trigger: CACGCCCTGCGCCCTGCAGTGGGCACTGACCAACGAGCAGCCCCATGGTGGGCGCCTGCGTGGGCCCTGCCAGCTCTTCGACTTCAATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS CCA 90 bp GAGAACAACCCCTCTCGCCCCTACACCTCCTCCGGCCCTGCCCGCTaGGCGCTCAGAGCTTCTCGTCCAGCTCCAGGCCCTGGTTATCCC +
Preference number: 5 (lower is better)
Translates to: ENNPSRPYTSSGPAR*ALRASRPAPGPGYP
Trigger: GGGATAACCAGGGCCTGGAGCTGGACGAGAAGCTCTGAGCGCCCAGCGGGCAGGGCCGGAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGGGGCTGTTTTCGAGTTaGCCCTTGGCTCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRGLFSS*PLAPMS
Trigger: GCTCATAGGAGCCAAGGGCAAACTCGAAAACAGCCC...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS GCA 90 bp GTCCTGGCACCAGCGGTGAGCAGAATACGGCCAGCTGCAGCCATTTaGGGGCTTCGCGCCCCACAGGTGCCTCCAGCACACAGGTGTAGA +
Preference number: 5 (lower is better)
Translates to: VLAPAVSRIRPAAAI*GLRAPQVPPAHRCR
Trigger: TCTACACCTGTGTGCTGGAGGCACCTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTCTGCTCACCGCTGGTGCCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS GCA 90 bp AGATGGGACTGTCCTGGCACCAGCGGTGAGCAGAATACGGCCAGCTaGAGCCATTTGCGGGCTTCGCGCCCCACAGGTGCCTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: RWDCPGTSGEQNTAS*SHLRASRPTGASST
Trigger: TGTGCTGGAGGCACCTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTCTGCTCACCGCTGGTGCCAGGACAGTCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS GCA 90 bp CTGCAGGCTGCCGTTCTGCTCCTCAAACAACTCCAGGATGGCCGCTaGGGGGCTGCGCTGGCAGGACAGGAACCGGATCTTCATGCCGCA +
Preference number: 5 (lower is better)
Translates to: LQAAVLLLKQLQDGR*GAALAGQEPDLHAA
Trigger: TGCGGCATGAAGATCCGGTTCCTGTCCTGCCAGCGCAGCCCCGCAGCGGCCATCCTGGAGTTGTTTGAGGAGCAGAACGGCAGCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CCA 90 bp GCAGCTCCTGCAGGCTGCCGTTCTGCTCCTCAAACAACTCCAGGATaGCCGCTGCGGGGCTGCGCTGGCAGGACAGGAACCGGATCTTCA +
Preference number: 5 (lower is better)
Translates to: AAPAGCRSAPQTTPG*PLRGCAGRTGTGSS
Trigger: TGAAGATCCGGTTCCTGTCCTGCCAGCGCAGCCCCGCAGCGGCCATCCTGGAGTTGTTTGAGGAGCAGAACGGCAGCCTGCAGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS-3UTR CAA 90 bp CCTCTGCCGGCCAGGAGGGGACCCGCACGCGGGACAGCTCGCGGCCGGAAGGGCTGCCAGAGAGATTGTTaGCCTGCCTTTGAACAAATT +
Preference number: 5 (lower is better)
Translates to: PLPARRGPARGTARGRKGCQRDC*PAFEQI
Trigger: AATTTGTTCAAAGGCAGGCAAACAATCTCTCTGGCA...GCCCTTCCGGCCGCGAGCTGTCCCGCGTGCGGGTCCCCTCCTGGCCGGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS CCA 90 bp CGCTGGCAGGACAGGAACCGGATCTTCATGCCGCAAAGCCCCAGGTaGGAGGCCAGTCTGCGCCAGTCATTGCCGGTGATGCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: RWQDRNRIFMPQSPR*EASLRQSLPVMLFG
Trigger: GCCAAACAGCATCACCGGCAATGACTGGCGCAGACTGGCCTCCCACCTGGGGCTTTGCGGCATGAAGATCCGGTTCCTGTCCTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS GCA 90 bp GAATACGGCCAGCTGCAGCCATTTGCGGGCTTCGCGCCCCACAGGTaGCTCCAGCACACAGGTGTAGAGGCTGAAGTGGGAGAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: EYGQLQPFAGFAPHR*LQHTGVEAEVGEVD
Trigger: ATCCACCTCTCCCACTTCAGCCTCTACACCTGTGTGCTGGAGGCACCTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS-3UTR CAA 90 bp TGCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTGCCAGCTGCAGCCATTaGCGGGCTTCGCGCCCCACA +
Preference number: 5 (lower is better)
Translates to: CCVPLRRRRTTPLAPTPPASCSH*RASRPT
Trigger: TGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGGC...AGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp ACGCGGGGACCGTGGCCGTCCCCTGGTCAGTTTGGCAGGCTGGCCACGCTGAGGAGGATTTCCATATACTaGGTCTCCAAGCCATCCTGG +
Preference number: 5 (lower is better)
Translates to: TRGPWPSPGQFGRLATLRRISIY*VSKPSW
Trigger: CCAGGATGGCTTGGAGACCAAGTATATGGAAATCCT...CCTCAGCGTGGCCAGCCTGCCAAACTGACCAGGGGACGGCCACGGTCCCCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS TCA 90 bp GAAGTAGATACGCAGTTGCAGATGGGACTGTCCTGGCACCAGCGGTaGGCAGAATACGGCCAGCTGCAGCCATTTGCGGGCTTCGCGCCC +
Preference number: 5 (lower is better)
Translates to: EVDTQLQMGLSWHQR*AEYGQLQPFAGFAP
Trigger: GGGCGCGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTCTGCTCACCGCTGGTGCCAGGACAGTCCCATCTGCAACTGCGTATCTACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS-3UTR CAA 90 bp GCTGTGTTCCTCTTAGGCGTAGGAGAACAACCCCTCTCGCCCCTACACCTCCTCTCGCCCCTAGCCCCATaGAAGTCGAAGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: AVFLLGVGEQPLSPLHLLSPLAP*KSKSWQ
Trigger: CTGCCAGCTCTTCGACTTCAATGGGGCTAGGGGCGA...GAGGAGGTGTAGGGGCGAGAGGGGTTGTTCTCCTACGCCTAAGAGGAACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS TCA 90 bp CGCAAAGCCCCAGGTGGGAGGCCAGTCTGCGCCAGTCATTGCCGGTaGTGCTGTTTGGCTCCAATAACATCCGCAGCTGCTCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RKAPGGRPVCASHCR*CCLAPITSAAAQRA
Trigger: AGCTCTTTGAGCAGCTGCGGATGTTATTGGAGCCAAACAGCATCACCGGCAATGACTGGCGCAGACTGGCCTCCCACCTGGGGCTTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CCA 90 bp TCCACATTCTCCCAACCCTCTGAGATGTACGTGAGCTTCAGGCACTaGTCGCCCCTAGCCCCATTGAAGTCGAAGAGCTGGCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: STFSQPSEMYVSFRH*SPLAPLKSKSWQGP
Trigger: TGGGCCCTGCCAGCTCTTCGACTTCAATGGGGCTAGGGGCGACCAGTGCCTGAAGCTCACGTACATCTCAGAGGGTTGGGAGAATGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS TCA 90 bp GGGCGGCTGGGAAACAGGTGGTGGCGCTGCCCAGGATTCCTCCTCTaGTGCCTGGAATCTGAGGATTTCCATATACTTGGTCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: GRLGNRWWRCPGFLL*CLESEDFHILGLQA
Trigger: GGCTTGGAGACCAAGTATATGGAAATCCTCAGATTCCAGGCATCAGAGGAGGAATCCTGGGCAGCGCCACCACCTGTTTCCCAGCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CCA 90 bp AATGAACTCTCCTGGGGGCACATTCGCCTGGTTACTCAATGCCGCTaGCTCTCCTTCACCCCTGTGCCAGCCAAAGCCAAAGGCCGTCTA +
Preference number: 5 (lower is better)
Translates to: NELSWGHIRLVTQCR*LSFTPVPAKAKGRL
Trigger: TAGACGGCCTTTGGCTTTGGCTGGCACAGGGGTGAAGGAGAGCCAGCGGCATTGAGTAACCAGGCGAATGTGCCCCCAGGAGAGTTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp TATTCCAGTATTCTTCATGACACCAGCCCAATGCCCGGTCTTCCTAAGTGCTCAAGTCTGCGCCAGTCATaGCCGGTGATGCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: YSSILHDTSPMPGLPKCSSLRQS*PVMLFG
Trigger: GCCAAACAGCATCACCGGCAATGACTGGCGCAGACT...TGAGCACTTAGGAAGACCGGGCATTGGGCTGGTGTCATGAAGAATACTGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp ACCAAGTCAGAGAAACTTAAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCCATGGGGCTGCTCGTaGGTCAGTGCCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: TKSEKLKTHTIGDKEIKGPWGCS*VSAHCR
Trigger: CCTGCAGTGGGCACTGACCAACGAGCAGCCCCATGG...CCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTTAAGTTTCTCTGACTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp AAAGATCTCCAAACCACTCGGCAAATCAAATCCTCTCTCCCCAACATCCTCCGTTTTTCGAGTTTGCCCTaGGCTCCTATGAGCACATCT +
Preference number: 5 (lower is better)
Translates to: KDLQTTRQIKSSLPNILRFSSLP*APMSTS
Trigger: AGATGTGCTCATAGGAGCCAAGGGCAAACTCGAAAA...ACGGAGGATGTTGGGGAGAGAGGATTTGATTTGCCGAGTGGTTTGGAGATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp ATGGGGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGAAGTAGATACGCAGTaGCAGATGGGACTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: MGCLFYPYPLFPNPKLDLEVDTQ*QMGLSW
Trigger: CCAGGACAGTCCCATCTGCAACTGCGTATCTACTTC...AAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp TGGCAGAGAGAGAGGAAGACACGGCCTAAGCAGGAGGATAAAGAGACAAAGGAAGCCAGAATGATCATCTaGAAGTTTCTACTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: WQRERKTRPKQEDKETKEARMII*KFLLSF
Trigger: AAAGCTGAGTAGAAACTTCAAGATGATCATTCTGGC...TTCCTTTGTCTCTTTATCCTCCTGCTTAGGCCGTGTCTTCCTCTCTCTCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp ATGGGGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGTGACAATGATCTCATaGGTTAGTGCTGAACAGTCC +
Preference number: 5 (lower is better)
Translates to: MGCLFYPYPLFPNPKLDLVTMIS*VSAEQS
Trigger: GGACTGTTCAGCACTAACCAATGAGATCATTGTCAC...AAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp GAGACTAGGCAGAAACAAAAAGATCTAAGACAGAGAGAGAGAGTAACTGAAACAAAAAGAACTGTGTGCTaGTCAGGGCTCCAGACCCTA +
Preference number: 5 (lower is better)
Translates to: ETRQKQKDLRQRERVTETKRTVC*SGLQTL
Trigger: TAGGGTCTGGAGCCCTGACAAGCACACAGTTCTTTT...TGTTTCAGTTACTCTCTCTCTCTGTCTTAGATCTTTTTGTTTCTGCCTAGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp GGTGCCTCTTTTATCCCTATCCTTTATTTCCCAACCCTAAACTGGATCTTGATCACCCTAAACTGGATCTaGATCCATGGGGAAAATATC +
Preference number: 5 (lower is better)
Translates to: GASFIPILYFPTLNWILITLNWI*IHGENI
Trigger: GATATTTTCCCCATGGATCAAGATCCAGTTTAGGGT...GATCAAGATCCAGTTTAGGGTTGGGAAATAAAGGATAGGGATAAAAGAGGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS-3UTR CAA 90 bp AAAACGCACACCATTGGAGATAAAGAGATAAAAGGGCTGGGCCAGAATGATCATGCCCATTCATGTCTTTaGTATACAGTATCAAACACA +
Preference number: 5 (lower is better)
Translates to: KTHTIGDKEIKGLGQNDHAHSCL*YTVSNT
Trigger: TGTGTTTGATACTGTATACAAAAGACATGAATGGGC...ATGATCATTCTGGCCCAGCCCTTTTATCTCTTTATCTCCAATGGTGTGCGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS CCA 72 bp GCCCTGGTTATCCCGGGCGCCCCCGCGCTCGGGGCCTaGGCTGCCGCCGTGTGTCCCACTCAGGTAGTTCTG +
Preference number: 6 (lower is better)
Translates to: ALVIPGAPALGA*AAAVCPTQVVL
Trigger: CAGAACTACCTGAGTGGGACACACGGCGGCAGCCCAGGCCCCGAGCGCGGGGGCGCCCGGGATAACCAGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS GCA 72 bp GGTTATCCCGGGCGCCCCCGCGCTCGGGGCCTGGGCTaGCGCCGTGTGTCCCACTCAGGTAGTTCTGGATGG +
Preference number: 6 (lower is better)
Translates to: GYPGRPRARGLG*RRVSHSGSSGW
Trigger: CCATCCAGAACTACCTGAGTGGGACACACGGCGGCAGCCCAGGCCCCGAGCGCGGGGGCGCCCGGGATAACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS GCA 72 bp CCAGCGGTGAGCAGAATACGGCCAGCTGCAGCCATTTaGGGGCTTCGCGCCCCACAGGTGCCTCCAGCACAC +
Preference number: 6 (lower is better)
Translates to: PAVSRIRPAAAI*GLRAPQVPPAH
Trigger: GTGTGCTGGAGGCACCTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTCTGCTCACCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS GCA 72 bp TGTCCTGGCACCAGCGGTGAGCAGAATACGGCCAGCTaGAGCCATTTGCGGGCTTCGCGCCCCACAGGTGCC +
Preference number: 6 (lower is better)
Translates to: CPGTSGEQNTAS*SHLRASRPTGA
Trigger: GGCACCTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTCTGCTCACCGCTGGTGCCAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS CCA 72 bp GCAGGCTGCCGTTCTGCTCCTCAAACAACTCCAGGATaGCCGCTGCGGGGCTGCGCTGGCAGGACAGGAACC +
Preference number: 6 (lower is better)
Translates to: AGCRSAPQTTPG*PLRGCAGRTGT
Trigger: GGTTCCTGTCCTGCCAGCGCAGCCCCGCAGCGGCCATCCTGGAGTTGTTTGAGGAGCAGAACGGCAGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS GCA 72 bp GCTCCTCAAACAACTCCAGGATGGCCGCTGCGGGGCTaGGCTGGCAGGACAGGAACCGGATCTTCATGCCGC +
Preference number: 6 (lower is better)
Translates to: APQTTPGWPLRG*AGRTGTGSSCR
Trigger: GCGGCATGAAGATCCGGTTCCTGTCCTGCCAGCGCAGCCCCGCAGCGGCCATCCTGGAGTTGTTTGAGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CAA 72 bp ACCAGCGGTGAGCAGAATACGGCCAGCTGCAGCCATTaGCGGGCTTCGCGCCCCACAGGTGCCTCCAGCACA +
Preference number: 6 (lower is better)
Translates to: TSGEQNTASCSH*RASRPTGASST
Trigger: TGTGCTGGAGGCACCTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTCTGCTCACCGCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS CAA 72 bp TACGTGAGCTTCAGGCACTGGTCGCCCCTAGCCCCATaGAAGTCGAAGAGCTGGCAGGGCCCACGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: YVSFRHWSPLAP*KSKSWQGPRRR
Trigger: GCGCCTGCGTGGGCCCTGCCAGCTCTTCGACTTCAATGGGGCTAGGGGCGACCAGTGCCTGAAGCTCACGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS GCA 72 bp CAGCTGCAGCCATTTGCGGGCTTCGCGCCCCACAGGTaGCTCCAGCACACAGGTGTAGAGGCTGAAGTGGGA +
Preference number: 6 (lower is better)
Translates to: QLQPFAGFAPHR*LQHTGVEAEVG
Trigger: TCCCACTTCAGCCTCTACACCTGTGTGCTGGAGGCACCTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS TCA 72 bp ACGCAGTTGCAGATGGGACTGTCCTGGCACCAGCGGTaGGCAGAATACGGCCAGCTGCAGCCATTTGCGGGC +
Preference number: 6 (lower is better)
Translates to: TQLQMGLSWHQR*AEYGQLQPFAG
Trigger: GCCCGCAAATGGCTGCAGCTGGCCGTATTCTGCTCACCGCTGGTGCCAGGACAGTCCCATCTGCAACTGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS CCA 72 bp GACAGGAACCGGATCTTCATGCCGCAAAGCCCCAGGTaGGAGGCCAGTCTGCGCCAGTCATTGCCGGTGATG +
Preference number: 6 (lower is better)
Translates to: DRNRIFMPQSPR*EASLRQSLPVM
Trigger: CATCACCGGCAATGACTGGCGCAGACTGGCCTCCCACCTGGGGCTTTGCGGCATGAAGATCCGGTTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CCA 72 bp TCAAACAACTCCAGGATGGCCGCTGCGGGGCTGCGCTaGCAGGACAGGAACCGGATCTTCATGCCGCAAAGC +
Preference number: 6 (lower is better)
Translates to: SNNSRMAAAGLR*QDRNRIFMPQS
Trigger: GCTTTGCGGCATGAAGATCCGGTTCCTGTCCTGCCAGCGCAGCCCCGCAGCGGCCATCCTGGAGTTGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS TCA 72 bp CCAGGTGGGAGGCCAGTCTGCGCCAGTCATTGCCGGTaGTGCTGTTTGGCTCCAATAACATCCGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PGGRPVCASHCR*CCLAPITSAAA
Trigger: AGCAGCTGCGGATGTTATTGGAGCCAAACAGCATCACCGGCAATGACTGGCGCAGACTGGCCTCCCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS GCA 72 bp CTCCGGAAGCAGAAGGAGCGGAAGGGGCACTTTCCATaGCAGATGTGGAGATGGGGAACCAGCTGGCAACTG +
Preference number: 6 (lower is better)
Translates to: LRKQKERKGHFP*QMWRWGTSWQL
Trigger: CAGTTGCCAGCTGGTTCCCCATCTCCACATCTGGCATGGAAAGTGCCCCTTCCGCTCCTTCTGCTTCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CAA 72 bp CAAAGCCCCAGGTGGGAGGCCAGTCTGCGCCAGTCATaGCCGGTGATGCTGTTTGGCTCCAATAACATCCGC +
Preference number: 6 (lower is better)
Translates to: QSPRWEASLRQS*PVMLFGSNNIR
Trigger: GCGGATGTTATTGGAGCCAAACAGCATCACCGGCAATGACTGGCGCAGACTGGCCTCCCACCTGGGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CAA 90 bp TTCATGCCGCAAAGCCCCAGGTGGGAGGCCAGTCTGCGCCAGTCATaGCCGGTGATGCTGTTTGGCTCCAATAACATCCGCAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: FMPQSPRWEASLRQS*PVMLFGSNNIRSCS
Trigger: TGAGCAGCTGCGGATGTTATTGGAGCCAAACAGCATCACCGGCAATGACTGGCGCAGACTGGCCTCCCACCTGGGGCTTTGCGGCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CCA 72 bp TCCCAACCCTCTGAGATGTACGTGAGCTTCAGGCACTaGTCGCCCCTAGCCCCATTGAAGTCGAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SQPSEMYVSFRH*SPLAPLKSKSW
Trigger: CCAGCTCTTCGACTTCAATGGGGCTAGGGGCGACCAGTGCCTGAAGCTCACGTACATCTCAGAGGGTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS GCA 72 bp GCCAAAGCCAAAGGCCGTCTAGGAGCTCTTAGAGGCTaGTGGCTGGTCCAGTTCCTTCTCCGAGAAACAAGG +
Preference number: 6 (lower is better)
Translates to: AKAKGRLGALRG*WLVQFLLRETR
Trigger: CCTTGTTTCTCGGAGAAGGAACTGGACCAGCCAGCAGCCTCTAAGAGCTCCTAGACGGCCTTTGGCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS CCA 72 bp AAAGCCAAAGGCCGTCTAGGAGCTCTTAGAGGCTGCTaGCTGGTCCAGTTCCTTCTCCGAGAAACAAGGGTC +
Preference number: 6 (lower is better)
Translates to: KAKGRLGALRGC*LVQFLLRETRV
Trigger: GACCCTTGTTTCTCGGAGAAGGAACTGGACCAGCCAGCAGCCTCTAAGAGCTCCTAGACGGCCTTTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244565.8
CDS GCA 72 bp CATGCCAGATGTGGAGATGGGGAACCAGCTGGCAACTaGTGTCATCCACATTCTCCCAACCCTCTGAGATGT +
Preference number: 6 (lower is better)
Translates to: HARCGDGEPAGN*CHPHSPNPLRC
Trigger: ACATCTCAGAGGGTTGGGAGAATGTGGATGACAGCAGTTGCCAGCTGGTTCCCCATCTCCACATCTGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244565.8
ENST00000373164.1
ENST00000470102.1
CDS CAA 72 bp TCCTCTGATGCCTGGAATCTGAGGATTTCCATATACTaGGTCTCCAAGCCATCCTGGAAGGTGTGCATGGTG +
Preference number: 6 (lower is better)
Translates to: SSDAWNLRISIY*VSKPSWKVCMV
Trigger: CACCATGCACACCTTCCAGGATGGCTTGGAGACCAAGTATATGGAAATCCTCAGATTCCAGGCATCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS CAA 90 bp GTCTCCAAGCCATCCTGGAAGGTGTGCATGGTGACAATGATCTCATaGGTTAGTGCTGAACAGTCCTCATTCTCATCGGCTGCTTTTCTC +
Preference number: 6 (lower is better)
Translates to: VSKPSWKVCMVTMIS*VSAEQSSFSSAAFL
Trigger: GAGAAAAGCAGCCGATGAGAATGAGGACTGTTCAGCACTAACCAATGAGATCATTGTCACCATGCACACCTTCCAGGATGGCTTGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS CAA 72 bp CCATCCTGGAAGGTGTGCATGGTGACAATGATCTCATaGGTTAGTGCTGAACAGTCCTCATTCTCATCGGCT +
Preference number: 6 (lower is better)
Translates to: PSWKVCMVTMIS*VSAEQSSFSSA
Trigger: AGCCGATGAGAATGAGGACTGTTCAGCACTAACCAATGAGATCATTGTCACCATGCACACCTTCCAGGATGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1
CDS CAA 72 bp TCCTCTGATGCCTGGAATCTGAGGATTTCCATATACTaGGTCTCCAAGCCCTGCTTTTCTCCGGAAGCAGAA +
Preference number: 6 (lower is better)
Translates to: SSDAWNLRISIY*VSKPCFSPEAE
Trigger: TTCTGCTTCCGGAGAAAAGCAGGGCTTGGAGACCAAGTATATGGAAATCCTCAGATTCCAGGCATCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470102.1
CDS GCA 72 bp TCCATATACTTGGTCTCCAAGCCATCCTGGAAGGTGTaGATGGTGACAATGATCTCATTGGTTAGTGCTGAA +
Preference number: 6 (lower is better)
Translates to: SIYLVSKPSWKV*MVTMISLVSAE
Trigger: TTCAGCACTAACCAATGAGATCATTGTCACCATGCACACCTTCCAGGATGGCTTGGAGACCAAGTATATGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244565.8
ENST00000373164.1