RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC5C (Homo sapiens)

Ensembl gene IDs: ENSG00000182168

Ensembl transcript IDs: ENST00000453304.6, ENST00000504962.1, ENST00000506749.5, ENST00000513796.5, ENST00000610318.4

Found 785 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATCAGGATTGGCAGCCAGGGAGAGAAAAGAGGCACACCCGGAGCTaGTATCCCTCACCTCCACCACTCAGCAAGGCGCCGGACAGATAT +
Preference number: 1 (lower is better)
Translates to: NQDWQPGREKRHTRS*YPSPPPLSKAPDRY
Trigger: ATATCTGTCCGGCGCCTTGCTGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTGGCTGCCAATCCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 90 bp CTGGCTCCTGCTGCAGTCTTGCCTGTGAAGTGCATTGGTCTCATCTaGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTC +
Preference number: 1 (lower is better)
Translates to: LAPAAVLPVKCIGLI*ISSSAVIHLDGHRL
Trigger: GAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAGATGAGACCAATGCACTTCACAGGCAAGACTGCAGCAGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 90 bp AACACATATAACACCATGACATCACACACACACAGTGATGTTCCCTaGAACTGGGCTCGATGCATTATGTCTGGAGGGCGAGGGCTGCGC +
Preference number: 1 (lower is better)
Translates to: NTYNTMTSHTHSDVP*NWARCIMSGGRGLR
Trigger: GCGCAGCCCTCGCCCTCCAGACATAATGCATCGAGCCCAGTTGCAGGGAACATCACTGTGTGTGTGTGATGTCATGGTGTTATATGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 90 bp TGTTTTCCTTCTGGCTCCTGCTGCAGTCTTGCCTGTGAAGTGCATTaGTCTCATCTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGG +
Preference number: 1 (lower is better)
Translates to: CFPSGSCCSLACEVH*SHLDFLLSCDSPGR
Trigger: CCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAGATGAGACCAATGCACTTCACAGGCAAGACTGCAGCAGGAGCCAGAAGGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 90 bp GTATCTGTTTTCCTTCTGGCTCCTGCTGCAGTCTTGCCTGTGAAGTaGATTGGTCTCATCTGGATTTCCTCCTCAGCTGTGATTCACCTG +
Preference number: 1 (lower is better)
Translates to: VSVFLLAPAAVLPVK*IGLIWISSSAVIHL
Trigger: CAGGTGAATCACAGCTGAGGAGGAAATCCAGATGAGACCAATGCACTTCACAGGCAAGACTGCAGCAGGAGCCAGAAGGAAAACAGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 90 bp ATGCTTGTTTGTGGGGTTGAACATGAATCACTGTCTTCCCTGCAGTaGTACAGCTTTATTCCCAAAGGGCACCAGAAGGGTCCCTCCAAG +
Preference number: 1 (lower is better)
Translates to: MLVCGVEHESLSSLQ*YSFIPKGHQKGPSK
Trigger: CTTGGAGGGACCCTTCTGGTGCCCTTTGGGAATAAAGCTGTAGCACTGCAGGGAAGACAGTGATTCATGTTCAACCCCACAAACAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 90 bp GTGTTTCCATGGGACCCCTCTCATTCATTAGCCTTGGGCTTACACTaGGTTCTCCACATGAAACTGATGACTTGTCCAGAACAACTGCCC +
Preference number: 1 (lower is better)
Translates to: VFPWDPSHSLALGLH*VLHMKLMTCPEQLP
Trigger: GGGCAGTTGTTCTGGACAAGTCATCAGTTTCATGTGGAGAACTCAGTGTAAGCCCAAGGCTAATGAATGAGAGGGGTCCCATGGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 90 bp TGTTTCTACTCAGAAGCTAGTTGGGCCACAACTGTCACGACATTCTaGAGAGATTCCCAACCTGGGATTCCAGAAGATCTCTGGACAGGT +
Preference number: 1 (lower is better)
Translates to: CFYSEASWATTVTTF*RDSQPGIPEDLWTG
Trigger: ACCTGTCCAGAGATCTTCTGGAATCCCAGGTTGGGAATCTCTGCAGAATGTCGTGACAGTTGTGGCCCAACTAGCTTCTGAGTAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 90 bp TCCAACCACACTGCCTCTAGAGTAGAGCACCATAGGGAGTCGACGTaGGGCCACACAACGGCAATATTAAGTGAACTTAATAGAGAACAC +
Preference number: 1 (lower is better)
Translates to: SNHTASRVEHHREST*GHTTAILSELNREH
Trigger: GTGTTCTCTATTAAGTTCACTTAATATTGCCGTTGTGTGGCCCCACGTCGACTCCCTATGGTGCTCTACTCTAGAGGCAGTGTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 90 bp ACTGGAGGCATCACGGTGGAAGTTGAGCATTTCAGAACTTGGAGATaGTCTAATCCCACCCTTTCACTTTCTAGTGAGGACACTGAGGTC +
Preference number: 1 (lower is better)
Translates to: TGGITVEVEHFRTWR*SNPTLSLSSEDTEV
Trigger: GACCTCAGTGTCCTCACTAGAAAGTGAAAGGGTGGGATTAGATCATCTCCAAGTTCTGAAATGCTCAACTTCCACCGTGATGCCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 90 bp GTGGATGACACTGCCTCTTCAACACGACTGCTGGGGATTTTTCTCTaGCAAACATTGGTGTCTTCTTTACAAAGAGCAAAGAGGAAGGTC +
Preference number: 1 (lower is better)
Translates to: VDDTASSTRLLGIFL*QTLVSSLQRAKRKV
Trigger: GACCTTCCTCTTTGCTCTTTGTAAAGAAGACACCAATGTTTGTCAGAGAAAAATCCCCAGCAGTCGTGTTGAAGAGGCAGTGTCATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 90 bp CCAAAAGAGAGCCCATCAATCCTTAGGCTGCTGATCAGCAAAACCTaGCTACAATTCATCTTCTACACACCAGTACTGAGGGTTATTCCA +
Preference number: 1 (lower is better)
Translates to: PKESPSILRLLISKT*LQFIFYTPVLRVIP
Trigger: TGGAATAACCCTCAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCTAAGGATTGATGGGCTCTCTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 90 bp AAAGGGGACAGTAGGTGGATGACACTGCCTCTTCAACACGACTGCTaGGGATTTTTCTCTGACAAACATTGGTGTCTTCTTTACAAAGAG +
Preference number: 1 (lower is better)
Translates to: KGDSRWMTLPLQHDC*GFFSDKHWCLLYKE
Trigger: CTCTTTGTAAAGAAGACACCAATGTTTGTCAGAGAAAAATCCCCAGCAGTCGTGTTGAAGAGGCAGTGTCATCCACCTACTGTCCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 90 bp GGGTGGAATAAGGGAAAGGTAAAAGGTCAAGGAAGTGATGCATGTTaGATTAAACTGATGACCACACCCACCTTGATAGGTGAAAAGGTG +
Preference number: 1 (lower is better)
Translates to: GWNKGKVKGQGSDAC*IKLMTTPTLIGEKV
Trigger: CACCTTTTCACCTATCAAGGTGGGTGTGGTCATCAGTTTAATTCAACATGCATCACTTCCTTGACCTTTTACCTTTCCCTTATTCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 90 bp ATACAAACAGTAACACTGGTTCTACAAGTTCTAGAAACAGAACACTaGTGGGAGGATTATCTGAGACACTTGATGCACACGATTTGTAGC +
Preference number: 1 (lower is better)
Translates to: IQTVTLVLQVLETEH*WEDYLRHLMHTICS
Trigger: GCTACAAATCGTGTGCATCAAGTGTCTCAGATAATCCTCCCATCAGTGTTCTGTTTCTAGAACTTGTAGAACCAGTGTTACTGTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 90 bp GAAGTTGTCATTCACTTAATAGGAAACATTAAGGGTTCTGACAGATaGGTACCTCACACACGAAATCAATCACTTTTCCCTTTTCTGGTG +
Preference number: 1 (lower is better)
Translates to: EVVIHLIGNIKGSDR*VPHTRNQSLFPFLV
Trigger: CACCAGAAAAGGGAAAAGTGATTGATTTCGTGTGTGAGGTACTCATCTGTCAGAACCCTTAATGTTTCCTATTAAGTGAATGACAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGGGACAGTAGGTGGATaGCACTGCCTCTTCAACACG +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSGTVGG*HCLFNT
Trigger: CGTGTTGAAGAGGCAGTGTCATCCACCTACTGTCCC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAAGTTTCAGGGTGTCCTaGACTCAGTCCCCACGACTT +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSSFRVS*TQSPRL
Trigger: AAGTCGTGGGGACTGAGTTCAGGACACCCTGAAACT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTGCAGTCTTGCCTGTaGAGTGCATTGGTCTCATCT +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLQSCL*SALVSS
Trigger: AGATGAGACCAATGCACTTCACAGGCAAGACTGCAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAACTGTCACGACATTCTaGAGAGATTCCCAACCTGGG +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSTVTTF*RDSQPG
Trigger: CCCAGGTTGGGAATCTCTGCAGAATGTCGTGACAGT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATCCCCACCTGCTGAATaGATTGAGTCCTTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSSPPAE*IESLCL
Trigger: CAAACACAAGGACTCAATTCATTCAGCAGGTGGGGA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATGCATTGGTCTCATCTaGATTTCCTCCTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSCIGLI*ISSSAV
Trigger: CACAGCTGAGGAGGAAATCCAGATGAGACCAATGCA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGCCTGTGAAGTGCATTaGTCTCATCTGGATTTCCTC +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSACEVH*SHLDFL
Trigger: GAGGAAATCCAGATGAGACCAATGCACTTCACAGGC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGATGTCCGAGTAAAGTaGGCATGTACATGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSDVRVK*ACTWAV
Trigger: AACTGCCCATGTACATGCCCACTTTACTCGGACATC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGGATCTGGAAGCTCATaGCTAGACTTAGTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSGSGSS*LDLVCR
Trigger: TCTGCAGACTAAGTCTAGCCATGAGCTTCCAGATCC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAATTCCAGAAGATCTCTaGACAGGTCCCTTCAGTAGG +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSIPEDL*TGPFSR
Trigger: CCTACTGAAGGGACCTGTCCAGAGATCTTCTGGAAT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACAGAGATTCCCAACCTaGGATTCCAGAAGATCTCTG +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSQRFPT*DSRRSL
Trigger: CAGAGATCTTCTGGAATCCCAGGTTGGGAATCTCTG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAAAGGGTTCTGACAGATaGGTACCTCACACACGAAAT +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSKGSDR*VPHTRN
Trigger: ATTTCGTGTGTGAGGTACTCATCTGTCAGAACCCTT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTGTCTTCCCTGCAGTaGTACAGCTTTATTCCCAAA +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLSSLQ*YSFIPK
Trigger: TTTGGGAATAAAGCTGTAGCACTGCAGGGAAGACAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAACACATATAACACCATaGCATCACACACACACAGTG +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSTHITP*HHTHTV
Trigger: CACTGTGTGTGTGTGATGTCATGGTGTTATATGTGT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTGGGGATTTTTCTCTaGCAAACATTGGTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLGIFL*QTLVSS
Trigger: AGAAGACACCAATGTTTGTCAGAGAAAAATCCCCAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGTTCAGCAACTTGTGTaGCTCCAGCCTAAAAGTAAA +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSVQQLV*LQPKSK
Trigger: TTTACTTTTAGGCTGGAGGCACACAAGTTGCTGAAC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAATAGGAGCGGAAACATaGAAAGATGGAAGCACATGT +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSIGAET*KDGSTC
Trigger: ACATGTGCTTCCATCTTTCCATGTTTCCGCTCCTAT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACAGGTCCCCATTCTCTaGTGCTGCCTCCATAGTGCT +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTQVPIL*CCLHSA
Trigger: AGCACTATGGAGGCAGCATCAGAGAATGGGGACCTG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTTGTTCTTCAGTTTTaGTTTTGCTACTGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLVLQF*FCYWAL
Trigger: CAAAGCCCAGTAGCAAAACCAAAACTGAAGAACAAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTTTCCTCCTCAGCTGTaGTTCACCTGGACGGCCACA +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLFPPQL*FTWTAT
Trigger: TGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGCCAGTTATCAATTCTaGATCCAACTTCTATTCCTT +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSASYQF*IQLLFL
Trigger: AAGGAATAGAAGTTGGATTCAGAATTGATAACTGGC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATATCAACCATTATCTTaGGCAATGATGTACTGCTTC +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSYQPLS*AMMYCF
Trigger: GAAGCAGTACATCATTGCTCAAGATAATGGTTGATA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGACCAAGAGCACAGCTaGTGTGATCCTGACAGAGAC +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGDQEHS*CDPDRD
Trigger: GTCTCTGTCAGGATCACAGCAGCTGTGCTCTTGGTC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAATGTATCACATAGAATaGTTGATGAAGTGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSMYHIE*LMKWLP
Trigger: AGGAAGCCACTTCATCAACCATTCTATGTGATACAT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 90 bp GTGGCGCAACAAGACAGTGACAGACCCACAATGAGAACTGGTTTCTaGATCTCCAGTTTAGAGTCCATTCCTCCAACCACACTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: VAQQDSDRPTMRTGF*ISSLESIPPTTLPL
Trigger: TAGAGGCAGTGTGGTTGGAGGAATGGACTCTAAACTGGAGATCAAGAAACCAGTTCTCATTGTGGGTCTGTCACTGTCTTGTTGCGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCTGCAGTCTTGCCTGTaGAGTGCATTGGTCTCATCT +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLQSCL*SALVSS
Trigger: AGATGAGACCAATGCACTTCACAGGCAAGACTGCAG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTAACAGCATAATGCAATaGTGCAGAGCGACTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGNSIMQ*CRATQA
Trigger: GGCCTGAGTCGCTCTGCATCATTGCATTATGCTGTT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAACAGCATAATGCAATaGTGCAGAGCGACTCAGGCC +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTNSIMQ*CRATQA
Trigger: GGCCTGAGTCGCTCTGCATCATTGCATTATGCTGTT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGCCTTGGGCTTACACTaGGTTCTCCACATGAAACTG +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGALGLH*VLHMKL
Trigger: CAGTTTCATGTGGAGAACTCAGTGTAAGCCCAAGGC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGACCAAGAGCACAGCTaGTGTGATCCTGACAGAGAC +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLDQEHS*CDPDRD
Trigger: GTCTCTGTCAGGATCACAGCAGCTGTGCTCTTGGTC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATTTCCTCCTCAGCTGTaGTTCACCTGGACGGCCACA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQFPPQL*FTWTAT
Trigger: TGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCTTTGCCAGGAGAAGTaGAAAGTCTTGATTCCACCC +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLCQEK*KVLIPP
Trigger: GGGTGGAATCAAGACTTTTCACTTCTCCTGGCAAAG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGCCTTGGGCTTACACTaGGTTCTCCACATGAAACTG +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLALGLH*VLHMKL
Trigger: CAGTTTCATGTGGAGAACTCAGTGTAAGCCCAAGGC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACAGGTCCCCATTCTCTaGTGCTGCCTCCATAGTGCT +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQQVPIL*CCLHSA
Trigger: AGCACTATGGAGGCAGCATCAGAGAATGGGGACCTG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGCCATGGACAGTGTCTaGATCCCTGTCCAATTTGAT +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGAMDSV*IPVQFD
Trigger: ATCAAATTGGACAGGGATGCAGACACTGTCCATGGC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGCCATGGACAGTGTCTaGATCCCTGTCCAATTTGAT +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTAMDSV*IPVQFD
Trigger: ATCAAATTGGACAGGGATGCAGACACTGTCCATGGC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAATAATTGGTGGGCTTaGTGTGCCAGTACACTTGCG +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTNNWWA*CASTLA
Trigger: CGCAAGTGTACTGGCACAGCAAGCCCACCAATTATT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACATAGGGAGTCGACGTaGGGCCACACAACGGCAATA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQHREST*GHTTAI
Trigger: TATTGCCGTTGTGTGGCCCCACGTCGACTCCCTATG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAATTCCAGAAGATCTCTaGACAGGTCCCTTCAGTAGG +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTIPEDL*TGPFSR
Trigger: CCTACTGAAGGGACCTGTCCAGAGATCTTCTGGAAT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACAGAGATTCCCAACCTaGGATTCCAGAAGATCTCTG +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTQRFPT*DSRRSL
Trigger: CAGAGATCTTCTGGAATCCCAGGTTGGGAATCTCTG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATTCTTGTCCATGGCCTaGAGGAGTAGACATCTGAGT +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTFLSMA*RSRHLS
Trigger: ACTCAGATGTCTACTCCTCCAGGCCATGGACAAGAA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGATGTTCCCTGCAACTaGGCTCGATGCATTATGTCT +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTDVPCN*ARCIMS
Trigger: AGACATAATGCATCGAGCCCAGTTGCAGGGAACATC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAATGCAGGGGGTGGGCTaGGAGAGATTTTATAGAATA +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTMQGVG*ERFYRI
Trigger: TATTCTATAAAATCTCTCTCAGCCCACCCCCTGCAT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAAGGGTTCTGACAGATaGGTACCTCACACACGAAAT +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTKGSDR*VPHTRN
Trigger: ATTTCGTGTGTGAGGTACTCATCTGTCAGAACCCTT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGTACTGGGCTCACAGTaGCCTAATATTGAGATGAGT +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTVLGSQ*PNIEMS
Trigger: ACTCATCTCAATATTAGGTCACTGTGAGCCCAGTAC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATCTACACACCAGTACTaGGGGTTATTCCACCCCGGA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQSTHQY*GLFHPG
Trigger: TCCGGGGTGGAATAACCCTCAGTACTGGTGTGTAGA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGAGGATGGGGGTTTTCTaGATAGCAGAGGTGACTGTT +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLRMGVF*IAEVTV
Trigger: AACAGTCACCTCTGCTATGCAGAAAACCCCCATCCT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGAATAATTGGTGGGCTTaGTGTGCCAGTACACTTGCG +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLNNWWA*CASTLA
Trigger: CGCAAGTGTACTGGCACAGCAAGCCCACCAATTATT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTGCATTGGTCTCATCTaGATTTCCTCCTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLCIGLI*ISSSAV
Trigger: CACAGCTGAGGAGGAAATCCAGATGAGACCAATGCA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGGAAATGACTTCATTTaGCTTTCCTGGCCTGTATGG +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTGNDFI*LSWPVW
Trigger: CCATACAGGCCAGGAAAGCCAAATGAAGTCATTTCC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGGTCGTGTGGTTAAATaGCTTTCTCAAGGTGGCGCA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQGRVVK*LSQGGA
Trigger: TGCGCCACCTTGAGAAAGTCATTTAACCACACGACC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGCAGTTCCTCAGGGATaGGGATGGCGGAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRAVPQG*GWRRHQ
Trigger: TTGATGCCTCCGCCATCCTCATCCCTGAGGAACTGC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGATGCAGGGGGTGGGCTaGGAGAGATTTTATAGAATA +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLMQGVG*ERFYRI
Trigger: TATTCTATAAAATCTCTCTCAGCCCACCCCCTGCAT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTATGAATACAATGAGGTaGCAGGAAAACCTAGGAACC +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGMNTMR*QENLGT
Trigger: GGTTCCTAGGTTTTCCTGTCACCTCATTGTATTCAT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATTTCCTTCTGGCTCCTaGTGCAGTCTTGCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETFPSGS*CSLACE
Trigger: TTCACAGGCAAGACTGCAGCAGGAGCCAGAAGGAAA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACTGTGCCAGTACACTTaGGGAGTACCTGTTGGTTTG +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQLCQYT*GVPVGL
Trigger: CAAACCAACAGGTACTCCGCAAGTGTACTGGCACAG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAAGGCGTAACATAGCCTaGGCAAAAGACCAGCTGATG +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQRRNIA*AKDQLM
Trigger: CATCAGCTGGTCTTTTGCCCAGGCTATGTTACGCCT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 90 bp CCAATGGCAGATCTAGGAAAGCGTGAAGAAGAGAATGCAAATCACTaGTTCCACTGTTCTGACTGCTGTACTTTTTCTTGTCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: PMADLGKREEENANH*FHCSDCCTFSCPWP
Trigger: AGGCCATGGACAAGAAAAAGTACAGCAGTCAGAACAGTGGAACAAGTGATTTGCATTCTCTTCTTCACGCTTTCCTAGATCTGCCATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACATCACGGTGGAAGTTaGGCATTTCAGAACTTGGAG +
Preference number: 2 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETHHGGS*AFQNLE
Trigger: CTCCAAGTTCTGAAATGCTCAACTTCCACCGTGATG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCCTTCAGACTGATGAATaGGACTGGAGGCATCACGGT +
Preference number: 2 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSLQTDE*DWRHHG
Trigger: ACCGTGATGCCTCCAGTCTCATTCATCAGTCTGAAG...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATTGTTAAAGAGCTTGTaGTGGTCCCAAGGAAACATA +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTLLKSL*WSQGNI
Trigger: TATGTTTCCTTGGGACCATCACAAGCTCTTTAACAA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACCACAACCCTGGTACTaGTGCGTAATCTTGACAAGT +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQPQPWY*CVILTS
Trigger: ACTTGTCAAGATTACGCATCAGTACCAGGGTTGTGG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCTTGATTTCCATAGATaGTTCCACAACCCTGGTACT +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLDFHR*FHNPGT
Trigger: AGTACCAGGGTTGTGGAATCATCTATGGAAATCAAG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATATGTTGTGTATGAATaGGTTGATGTACTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTYVVYE*VDVLGS
Trigger: TGAGCCCAGTACATCAACTCATTCATACACAACATA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACTGCTTTCTTCCCTTTaGTTAACAACCCCAATTTTC +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTLLSSL*LTTPIF
Trigger: GAAAATTGGGGTTGTTAATCAAAGGGAAGAAAGCAG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTAAGACTCATTCAACTTaGAGGCTTGAAAACCCAACA +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGKTHST*RLENPT
Trigger: TGTTGGGTTTTCAAGCCTTCAAGTTGAATGAGTCTT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACACATTACATTTGGTTaGATGAGCCCGTTAATATCC +
Preference number: 2 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTHITFG*MSPLIS
Trigger: GGATATTAACGGGCTCATTCAACCAAATGTAATGTG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTTCCTTCTGGCTCCTaGTGCAGTCTTGCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSFPSGS*CSLACE
Trigger: TTCACAGGCAAGACTGCAGCAGGAGCCAGAAGGAAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTATTAACTCCCTTCTaGATACGTGGATTACAGAGG +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLLTPF*IRGLQR
Trigger: CCTCTGTAATCCACGTATGCAGAAGGGAGTTAATAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAAGGCGTAACATAGCCTaGGCAAAAGACCAGCTGATG +
Preference number: 2 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSRRNIA*AKDQLM
Trigger: CATCAGCTGGTCTTTTGCCCAGGCTATGTTACGCCT...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGATAGGAGCGGAAACATaGAAAGATGGAAGCACATGT +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLIGAET*KDGSTC
Trigger: ACATGTGCTTCCATCTTTCCATGTTTCCGCTCCTAT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTGTACACCACTAGATaGCAGCATGCACAAATGATA +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLYTTR*QHAQMI
Trigger: TATCATTTGTGCATGCTGCCATCTAGTGGTGTACAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGCTGCTAATAATTGGTaGGCTTGCTGTGCCAGTACA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQAANNW*ACCAST
Trigger: TGTACTGGCACAGCAAGCCCACCAATTATTAGCAGC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATACTCAGAAGCTAGTTaGGCCACAACTGTCACGACA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQYSEAS*ATTVTT
Trigger: TGTCGTGACAGTTGTGGCCCAACTAGCTTCTGAGTA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 90 bp ATTAGCCTTGGGCTTACACTGAGTTCTCCACATGAAACTGATGACTaGTCCAGAACAACTGCCCAGCAAAAGCTAAGACTCATTCAACTT +
Preference number: 2 (lower is better)
Translates to: ISLGLTLSSPHETDD*SRTTAQQKLRLIQL
Trigger: AAGTTGAATGAGTCTTAGCTTTTGCTGGGCAGTTGTTCTGGACAAGTCATCAGTTTCATGTGGAGAACTCAGTGTAAGCCCAAGGCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTGTCATAAAGGTCCTTaGACTCTACAGGTTTTCATT +
Preference number: 2 (lower is better)
Translates to: VGKRLSRQQADEELLIIGCHKGP*TLQVFI
Trigger: AATGAAAACCTGTAGAGTTCAAGGACCTTTATGACA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTATGTTGTGTATGAATaGGTTGATGTACTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLYVVYE*VDVLGS
Trigger: TGAGCCCAGTACATCAACTCATTCATACACAACATA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGAGAAGTGAAAAGTCTTaGTTCCACCCTCAAAACGTT +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLRSEKS*FHPQNV
Trigger: AACGTTTTGAGGGTGGAATCAAGACTTTTCACTTCT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGGAAATCTTCCAAAGTaGTCATTACAGCCAGAGATT +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLGNLPK*SLQPEI
Trigger: AATCTCTGGCTGTAATGATCACTTTGGAAGATTTCC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GGTCTCAACTTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGAAGCCATCTTTCAGCTaGAAATCTCCTCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: GLNFLSLRIRMLLSFWYRKPSFS*KSPLLL
Trigger: AAGCAGGAGAGGAGATTTTCAGCTGAAAGATGGCTT...CCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAAGTTGAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
3UTR-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACTGGAGGCATCACGGTaGAAGTTGAGCATTTCAGAA +
Preference number: 2 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSLEASR*KLSISE
Trigger: TTCTGAAATGCTCAACTTCCACCGTGATGCCTCCAG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACACTTTTCCCTTTTCTaGTGGTGGGAAGTTGAACCA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQHFSLF*WWEVEP
Trigger: TGGTTCAACTTCCCACCACCAGAAAAGGGAAAAGTG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATCAGCTGTGTTTCCATaGGACCCCTCTCATTCATTA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQSAVFP*DPSHSL
Trigger: TAATGAATGAGAGGGGTCCCATGGAAACACAGCTGA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGGCACACATTACATTTaGTTGAATGAGCCCGTTAAT +
Preference number: 2 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLGTHYI*LNEPVN
Trigger: ATTAACGGGCTCATTCAACCAAATGTAATGTGTGCC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 90 bp ATTTGGAAGATGCCGTTTGTGAAACAGCTGTTAGCTGTGAGAACCTaGGTGTTACACAGGTTTGTCATCACCATGCCAGTTATCAATTCT +
Preference number: 2 (lower is better)
Translates to: IWKMPFVKQLLAVRT*VLHRFVITMPVINS
Trigger: AGAATTGATAACTGGCATGGTGATGACAAACCTGTGTAACACCAAGGTTCTCACAGCTAACAGCTGTTTCACAAACGGCATCTTCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGCTGAAGGAACAGACTaGCAAAGCCATTCAGCATTT +
Preference number: 2 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSAEGTD*QSHSAF
Trigger: AAATGCTGAATGGCTTTGTCAGTCTGTTCCTTCAGC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACTGGGGATTTTTCTCTaGCAAACATTGGTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQLGIFL*QTLVSS
Trigger: AGAAGACACCAATGTTTGTCAGAGAAAAATCCCCAG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAAGTGGGCATGTACATaGGCAGTTGTATCTGTTTTC +
Preference number: 2 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETKWACT*AVVSVF
Trigger: GAAAACAGATACAACTGCCCATGTACATGCCCACTT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATATCAATCACCTTTCTaGGGTGGAATAAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETYQSPF*GGIRER
Trigger: CCTTTCCCTTATTCCACCCCAGAAAGGTGATTGATA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACATCACGGTGGAAGTTaGGCATTTCAGAACTTGGAG +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRHHGGS*AFQNLE
Trigger: CTCCAAGTTCTGAAATGCTCAACTTCCACCGTGATG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACTGATCAGCAAAACCTaGCTACAATTCATCTTCTAC +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQLISKT*LQFIFY
Trigger: GTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGCCTGTGAAGTGCATTaGTCTCATCTGGATTTCCTC +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRACEVH*SHLDFL
Trigger: GAGGAAATCCAGATGAGACCAATGCACTTCACAGGC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGATGTCCGAGTAAAGTaGGCATGTACATGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLDVRVK*ACTWAV
Trigger: AACTGCCCATGTACATGCCCACTTTACTCGGACATC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAATCACCTTTCTGGGGTaGAATAAGGGAAAGGTAAAA +
Preference number: 2 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQITFLG*NKGKVK
Trigger: TTTTACCTTTCCCTTATTCCACCCCAGAAAGGTGAT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTATCAATCACCTTTCTaGGGTGGAATAAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSYQSPF*GGIRER
Trigger: CCTTTCCCTTATTCCACCCCAGAAAGGTGATTGATA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAATGAGTTGATGTACTaGGCTCACAGTGACCTAATA +
Preference number: 2 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETNELMY*AHSDLI
Trigger: TATTAGGTCACTGTGAGCCCAGTACATCAACTCATT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGCTGAAGGAACAGACTaGCAAAGCCATTCAGCATTT +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRAEGTD*QSHSAF
Trigger: AAATGCTGAATGGCTTTGTCAGTCTGTTCCTTCAGC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGTCTTGCCTGTGAAGTaGATTGGTCTCATCTGGATT +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRVLPVK*IGLIWI
Trigger: AATCCAGATGAGACCAATGCACTTCACAGGCAAGAC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCTGTCTTCCCTGCAGTaGTACAGCTTTATTCCCAAA +
Preference number: 2 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLSSLQ*YSFIPK
Trigger: TTTGGGAATAAAGCTGTAGCACTGCAGGGAAGACAG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACTTGATTTCCATAGATaGTTCCACAACCCTGGTACT +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRLDFHR*FHNPGT
Trigger: AGTACCAGGGTTGTGGAATCATCTATGGAAATCAAG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAAATCACTGTCTTCCCTaGAGTGCTACAGCTTTATTC +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRNHCLP*SATALF
Trigger: GAATAAAGCTGTAGCACTGCAGGGAAGACAGTGATT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGGAAGTGATGCATGTTaGATTAAACTGATGACCACA +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRGSDAC*IKLMTT
Trigger: TGTGGTCATCAGTTTAATTCAACATGCATCACTTCC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTTGTTAAAGAGCTTGTaGTGGTCCCAAGGAAACATA +
Preference number: 2 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLLKSL*WSQGNI
Trigger: TATGTTTCCTTGGGACCATCACAAGCTCTTTAACAA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAATCACCTTTCTGGGGTaGAATAAGGGAAAGGTAAAA +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRITFLG*NKGKVK
Trigger: TTTTACCTTTCCCTTATTCCACCCCAGAAAGGTGAT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATTTTCCCTTTTCTGGTaGTGGGAAGTTGAACCAAAA +
Preference number: 2 (lower is better)
Translates to: GPSKFESNLTAITLLQRRFSLFW*WEVEPK
Trigger: TTTTGGTTCAACTTCCCACCACCAGAAAAGGGAAAA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAATGACCACACCCACCTaGATAGGTGAAAAGGTGGGA +
Preference number: 3 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSMTTPT*IGEKVG
Trigger: TCCCACCTTTTCACCTATCAAGGTGGGTGTGGTCAT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGAGACAAGAGCCTTGTaGCTCTTTGCCAGGAGAAGT +
Preference number: 3 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSETRAL*LFARRS
Trigger: ACTTCTCCTGGCAAAGAGCAACAAGGCTCTTGTCTC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp AGTGCATTGGTCTCATCTGGATTTCCTCCTCAGCTGTaGTTCACCTGGACGGCCACAGACTCCCTGTGCATT +
Preference number: 3 (lower is better)
Translates to: SALVSSGFPPQL*FTWTATDSLCI
Trigger: AATGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAGATGAGACCAATGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATATCACATAGAATGGTaGATGAAGTGGCTTCCTATG +
Preference number: 3 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSYHIEW*MKWLPM
Trigger: CATAGGAAGCCACTTCATCAACCATTCTATGTGATA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACTTGCGGAGTACCTGTaGGTTTGTCCTGCTGATGCC +
Preference number: 3 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTLAEYL*VCPADA
Trigger: GGCATCAGCAGGACAAACCAACAGGTACTCCGCAAG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp ACATTGAGAACCTATGTAGCTCAGGTCCCCATTCTCTaGTGCTGCCTCCATAGTGCTCAGGATCAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: TLRTYVAQVPIL*CCLHSAQDQRP
Trigger: TGGCCTCTGATCCTGAGCACTATGGAGGCAGCATCAGAGAATGGGGACCTGAGCTACATAGGTTCTCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 72 bp AACACCATGACATCACACACACACAGTGATGTTCCCTaGAACTGGGCTCGATGCATTATGTCTGGAGGGCGA +
Preference number: 3 (lower is better)
Translates to: NTMTSHTHSDVP*NWARCIMSGGR
Trigger: TCGCCCTCCAGACATAATGCATCGAGCCCAGTTGCAGGGAACATCACTGTGTGTGTGTGATGTCATGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 72 bp TCTGGCTCCTGCTGCAGTCTTGCCTGTGAAGTGCATTaGTCTCATCTGGATTTCCTCCTCAGCTGTGATTCA +
Preference number: 3 (lower is better)
Translates to: SGSCCSLACEVH*SHLDFLLSCDS
Trigger: TGAATCACAGCTGAGGAGGAAATCCAGATGAGACCAATGCACTTCACAGGCAAGACTGCAGCAGGAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 72 bp CACAACTGTCACGACATTCTGCAGAGATTCCCAACCTaGGATTCCAGAAGATCTCTGGACAGGTCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: HNCHDILQRFPT*DSRRSLDRSLQ
Trigger: CTGAAGGGACCTGTCCAGAGATCTTCTGGAATCCCAGGTTGGGAATCTCTGCAGAATGTCGTGACAGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 72 bp TTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTaGATGACACTGCCTCTTCAACACGACTGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: FLQLNCSKGDSR*MTLPLQHDCWG
Trigger: TCCCCAGCAGTCGTGTTGAAGAGGCAGTGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGCAACTGAAGATATGTaGTGTATGAATGAGTTGATG +
Preference number: 3 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSATEDM*CMNELM
Trigger: CATCAACTCATTCATACACAACATATCTTCAGTTGC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCACGAGACAAGAGCCTaGTTGCTCTTTGCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: VGKRLSRQQADEELLIIGHETRA*LLFARR
Trigger: TCTCCTGGCAAAGAGCAACAAGGCTCTTGTCTCGTG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp AAACCTGCCTACAATTCATCTTCTACACACCAGTACTaGGGGTTATTCCACCCCGGATCAGCGCCATCAGGT +
Preference number: 3 (lower is better)
Translates to: KPAYNSSSTHQY*GLFHPGSAPSG
Trigger: ACCTGATGGCGCTGATCCGGGGTGGAATAACCCTCAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 72 bp TCAGAAGCTAGTTGGGCCACAACTGTCACGACATTCTaGAGAGATTCCCAACCTGGGATTCCAGAAGATCTC +
Preference number: 3 (lower is better)
Translates to: SEASWATTVTTF*RDSQPGIPEDL
Trigger: GAGATCTTCTGGAATCCCAGGTTGGGAATCTCTGCAGAATGTCGTGACAGTTGTGGCCCAACTAGCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTATGACCACACCCACCTaGATAGGTGAAAAGGTGGGA +
Preference number: 3 (lower is better)
Translates to: VGKRLSRQQADEELLIIGMTTPT*IGEKVG
Trigger: TCCCACCTTTTCACCTATCAAGGTGGGTGTGGTCAT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 72 bp ACTGCCTCTAGAGTAGAGCACCATAGGGAGTCGACGTaGGGCCACACAACGGCAATATTAAGTGAACTTAAT +
Preference number: 3 (lower is better)
Translates to: TASRVEHHREST*GHTTAILSELN
Trigger: ATTAAGTTCACTTAATATTGCCGTTGTGTGGCCCCACGTCGACTCCCTATGGTGCTCTACTCTAGAGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGCTCCTGCTGCAGTCTaGCCTGTGAAGTGCATTGGT +
Preference number: 3 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETAPAAV*PVKCIG
Trigger: ACCAATGCACTTCACAGGCAAGACTGCAGCAGGAGC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGCATCACGGTGGAAGTaGAGCATTTCAGAACTTGGA +
Preference number: 3 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTASRWK*SISELG
Trigger: TCCAAGTTCTGAAATGCTCAACTTCCACCGTGATGC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACTTGCGGAGTACCTGTaGGTTTGTCCTGCTGATGCC +
Preference number: 3 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQLAEYL*VCPADA
Trigger: GGCATCAGCAGGACAAACCAACAGGTACTCCGCAAG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCATGTACATGGGCAGTaGTATCTGTTTTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: VGKRLSRQQADEELLIIGHVHGQ*YLFSFW
Trigger: CCAGAAGGAAAACAGATACAACTGCCCATGTACATG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGAGTCTGTTCAGCAACTaGTGTGCCTCCAGCCTAAAA +
Preference number: 3 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLSLFSN*CASSLK
Trigger: TTTTAGGCTGGAGGCACACAAGTTGCTGAACAGACT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATTAGCTGTGAGAACCTaGGTGTTACACAGGTTTGTC +
Preference number: 3 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTLAVRT*VLHRFV
Trigger: GACAAACCTGTGTAACACCAAGGTTCTCACAGCTAA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGAGCCTTGTTGCTCTTaGCCAGGAGAAGTGAAAAGT +
Preference number: 3 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLEPCCS*PGEVKS
Trigger: ACTTTTCACTTCTCCTGGCAAAGAGCAACAAGGCTC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp TGGGACCCCTCTCATTCATTAGCCTTGGGCTTACACTaGGTTCTCCACATGAAACTGATGACTTGTCCAGAA +
Preference number: 3 (lower is better)
Translates to: WDPSHSLALGLH*VLHMKLMTCPE
Trigger: TTCTGGACAAGTCATCAGTTTCATGTGGAGAACTCAGTGTAAGCCCAAGGCTAATGAATGAGAGGGGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 72 bp TTGTTTGTGGGGTTGAACATGAATCACTGTCTTCCCTaGAGTGCTACAGCTTTATTCCCAAAGGGCACCAGA +
Preference number: 3 (lower is better)
Translates to: LFVGLNMNHCLP*SATALFPKGTR
Trigger: TCTGGTGCCCTTTGGGAATAAAGCTGTAGCACTGCAGGGAAGACAGTGATTCATGTTCAACCCCACAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 72 bp AGCCCATCAATCCTTAGGCTGCTGATCAGCAAAACCTaGCTACAATTCATCTTCTACACACCAGTACTGAGG +
Preference number: 3 (lower is better)
Translates to: SPSILRLLISKT*LQFIFYTPVLR
Trigger: CCTCAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCTAAGGATTGATGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 72 bp GACAGTAGGTGGATGACACTGCCTCTTCAACACGACTaGTGGGGATTTTTCTCTGACAAACATTGGTGTCTT +
Preference number: 3 (lower is better)
Translates to: DSRWMTLPLQHD*WGFFSDKHWCL
Trigger: AAGACACCAATGTTTGTCAGAGAAAAATCCCCAGCAGTCGTGTTGAAGAGGCAGTGTCATCCACCTACTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTGTGTATGAATGAGTaGATGTACTGGGCTCACAGT +
Preference number: 3 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLCMNE*MYWAHS
Trigger: ACTGTGAGCCCAGTACATCAACTCATTCATACACAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTTAGCTGTGAGAACCTaGGTGTTACACAGGTTTGTC +
Preference number: 3 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLAVRT*VLHRFV
Trigger: GACAAACCTGTGTAACACCAAGGTTCTCACAGCTAA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGAGGTGACTGTTCATTaGGAAGATGCCGTTTGTGAA +
Preference number: 3 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLEVTVH*EDAVCE
Trigger: TTCACAAACGGCATCTTCCAAATGAACAGTCACCTC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 72 bp ACTAAAGGATCTGGAAGCTCATGGCTAGACTTAGTCTaGAGAGAAAACCCACCCAGTTCTACACAAAGCCAT +
Preference number: 3 (lower is better)
Translates to: TKGSGSSWLDLV*RENPPSSTQSH
Trigger: ATGGCTTTGTGTAGAACTGGGTGGGTTTTCTCTGCAGACTAAGTCTAGCCATGAGCTTCCAGATCCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 72 bp TGGATAAAGTCCCATTTCATTTCAGCTGTGTTTCCATaGGACCCCTCTCATTCATTAGCCTTGGGCTTACAC +
Preference number: 3 (lower is better)
Translates to: WIKSHFISAVFP*DPSHSLALGLH
Trigger: GTGTAAGCCCAAGGCTAATGAATGAGAGGGGTCCCATGGAAACACAGCTGAAATGAAATGGGACTTTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGCATCACGGTGGAAGTaGAGCATTTCAGAACTTGGA +
Preference number: 3 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETASRWK*SISELG
Trigger: TCCAAGTTCTGAAATGCTCAACTTCCACCGTGATGC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTCTTCAGTTTTGGTTTaGCTACTGGGCTTTGATTCT +
Preference number: 3 (lower is better)
Translates to: VGKRLSRQQADEELLIIGSSVLV*LLGFDS
Trigger: AGAATCAAAGCCCAGTAGCAAAACCAAAACTGAAGA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGAGCCTTGTTGCTCTTaGCCAGGAGAAGTGAAAAGT +
Preference number: 3 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQEPCCS*PGEVKS
Trigger: ACTTTTCACTTCTCCTGGCAAAGAGCAACAAGGCTC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACATGAAACTGATGACTaGTCCAGAACAACTGCCCAG +
Preference number: 3 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQHETDD*SRTTAQ
Trigger: CTGGGCAGTTGTTCTGGACAAGTCATCAGTTTCATG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp ATCACGGTGGAAGTTGAGCATTTCAGAACTTGGAGATaGTCTAATCCCACCCTTTCACTTTCTAGTGAGGAC +
Preference number: 3 (lower is better)
Translates to: ITVEVEHFRTWR*SNPTLSLSSED
Trigger: GTCCTCACTAGAAAGTGAAAGGGTGGGATTAGATCATCTCCAAGTTCTGAAATGCTCAACTTCCACCGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp AAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATaGTGCAGAGCGACTCAGGCCAAACAAACAACATCA +
Preference number: 3 (lower is better)
Translates to: KGCHLSVNSIMQ*CRATQAKQTTS
Trigger: TGATGTTGTTTGTTTGGCCTGAGTCGCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR GCA 72 bp GAAGAGAATGCAAATCACTTGTTCCACTGTTCTGACTaGTGTACTTTTTCTTGTCCATGGCCTGGAGGAGTA +
Preference number: 3 (lower is better)
Translates to: EENANHLFHCSD*CTFSCPWPGGV
Trigger: TACTCCTCCAGGCCATGGACAAGAAAAAGTACAGCAGTCAGAACAGTGGAACAAGTGATTTGCATTCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACATGTACATGGGCAGTaGTATCTGTTTTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETHVHGQ*YLFSFW
Trigger: CCAGAAGGAAAACAGATACAACTGCCCATGTACATG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGCAACTGAAGATATGTaGTGTATGAATGAGTTGATG +
Preference number: 3 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTATEDM*CMNELM
Trigger: CATCAACTCATTCATACACAACATATCTTCAGTTGC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATGGTGTTACACAGGTTaGTCATCACCATGCCAGTTA +
Preference number: 3 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETWCYTG*SSPCQL
Trigger: TAACTGGCATGGTGATGACAAACCTGTGTAACACCA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp GTAACACTGGTTCTACAAGTTCTAGAAACAGAACACTaGTGGGAGGATTATCTGAGACACTTGATGCACACG +
Preference number: 3 (lower is better)
Translates to: VTLVLQVLETEH*WEDYLRHLMHT
Trigger: CGTGTGCATCAAGTGTCTCAGATAATCCTCCCATCAGTGTTCTGTTTCTAGAACTTGTAGAACCAGTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp ACTGCCTCTTCAACACGACTGCTGGGGATTTTTCTCTaGCAAACATTGGTGTCTTCTTTACAAAGAGCAAAG +
Preference number: 3 (lower is better)
Translates to: TASSTRLLGIFL*QTLVSSLQRAK
Trigger: CTTTGCTCTTTGTAAAGAAGACACCAATGTTTGTCAGAGAAAAATCCCCAGCAGTCGTGTTGAAGAGGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR TCA 72 bp TACTTTCCTTCTGGTATAGGGAAGCCATCTTTCAGCTaGAAATCTCCTCTCCTGCTTTTAAGAGACAGGACT +
Preference number: 3 (lower is better)
Translates to: YFPSGIGKPSFS*KSPLLLLRDRT
Trigger: AGTCCTGTCTCTTAAAAGCAGGAGAGGAGATTTTCAGCTGAAAGATGGCTTCCCTATACCAGAAGGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
3UTR CCA 72 bp GATCGATACAGAATTATCTGGATCGTAACTTCCCCGTaGTCTCAACTTCCTGTCCTTGAGGATAAGAATGTT +
Preference number: 3 (lower is better)
Translates to: DRYRIIWIVTSP*SQLPVLEDKNV
Trigger: AACATTCTTATCCTCAAGGACAGGAAGTTGAGACCACGGGGAAGTTACGATCCAGATAATTCTGTATCGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
3UTR CCA 72 bp ATTTTTCTTAACTCCCGTGATGATGTCCGAGTAAAGTaGGCATGTACATGGGCAGTTGTATCTGTTTTCCTT +
Preference number: 3 (lower is better)
Translates to: IFLNSRDDVRVK*ACTWAVVSVFL
Trigger: AAGGAAAACAGATACAACTGCCCATGTACATGCCCACTTTACTCGGACATCATCACGGGAGTTAAGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTGCTTGTTTGTGGGGTaGAACATGAATCACTGTCTT +
Preference number: 3 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSCLFVG*NMNHCL
Trigger: AAGACAGTGATTCATGTTCAACCCCACAAACAAGCA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCATGAGAACTGGTTTCTaGATCTCCAGTTTAGAGTCC +
Preference number: 3 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSMRTGF*ISSLES
Trigger: GGACTCTAAACTGGAGATCAAGAAACCAGTTCTCAT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACATACACATGTCTGCTaGTTCTTCAGTTTTGGTTTT +
Preference number: 3 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQHTHVC*FFSFGF
Trigger: AAAACCAAAACTGAAGAACAAGCAGACATGTGTATG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAAACATCCACTGAACTaGTTTATAGTGCAATCTCTC +
Preference number: 3 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETKHPLN*FIVQSL
Trigger: GAGAGATTGCACTATAAACAAGTTCAGTGGATGTTT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAACACATTACATTTGGTaGAATGAGCCCGTTAATATC +
Preference number: 3 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQTHYIW*NEPVNI
Trigger: GATATTAACGGGCTCATTCAACCAAATGTAATGTGT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGATTATCTGAGACACTaGATGCACACGATTTGTAGC +
Preference number: 3 (lower is better)
Translates to: GPSKFESNLTAITLLQRRDYLRH*MHTICS
Trigger: GCTACAAATCGTGTGCATCAAGTGTCTCAGATAATC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAATGAGAACTGGTTTCTaGATCTCCAGTTTAGAGTCC +
Preference number: 3 (lower is better)
Translates to: GPSKFESNLTAITLLQRRMRTGF*ISSLES
Trigger: GGACTCTAAACTGGAGATCAAGAAACCAGTTCTCAT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR-3UTR CAA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACATACACATGTCTGCTaGTTCTTCAGTTTTGGTTTT +
Preference number: 3 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSHTHVC*FFSFGF
Trigger: AAAACCAAAACTGAAGAACAAGCAGACATGTGTATG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 72 bp GAATCTCAAGATGCTACCAAAATAGGAGCGGAAACATaGAAAGATGGAAGCACATGTATAATTCAAGTCTGT +
Preference number: 3 (lower is better)
Translates to: ESQDATKIGAET*KDGSTCIIQVC
Trigger: ACAGACTTGAATTATACATGTGCTTCCATCTTTCCATGTTTCCGCTCCTATTTTGGTAGCATCTTGAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 72 bp AAAGGCAATTGCATACAATTCAACACAGCCATTATCTaGACTAGGAAATTAAACCTCAGGGTAATCAGAGGA +
Preference number: 3 (lower is better)
Translates to: KGNCIQFNTAII*TRKLNLRVIRG
Trigger: TCCTCTGATTACCCTGAGGTTTAATTTCCTAGTCCAGATAATGGCTGTGTTGAATTGTATGCAATTGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
3UTR TCA 72 bp ATTCACTTAATAGGAAACATTAAGGGTTCTGACAGATaGGTACCTCACACACGAAATCAATCACTTTTCCCT +
Preference number: 3 (lower is better)
Translates to: IHLIGNIKGSDR*VPHTRNQSLFP
Trigger: AGGGAAAAGTGATTGATTTCGTGTGTGAGGTACTCATCTGTCAGAACCCTTAATGTTTCCTATTAAGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CCA 72 bp ACAGCTGGTCTGATAGTACTTAGTCCAGTAGACCTTTaGAACTTAAAAATGACACACAATTTAGACATATTT +
Preference number: 3 (lower is better)
Translates to: TAGLIVLSPVDL*NLKMTHNLDIF
Trigger: AAATATGTCTAAATTGTGTGTCATTTTTAAGTTCCAAAGGTCTACTGGACTAAGTACTATCAGACCAGCTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACCGTGCACTCCCTCCTaGGCCAGTGGGTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAPCTPS*ASGCTQ
Trigger: CTGAGTGCACCCACTGGCGCAGGAGGGAGTGCACGG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGGCCGTCGCAGTCCTTaGCTCCATTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSGRRSP*LHSWGL
Trigger: CAGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAGAAGGCACCCCCATTaGGTGGTGCCGGGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCARRHPH*VVPGWY
Trigger: GTACCAACCCGGCACCACTCAATGGGGGTGCCTTCT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGGCACCCCCATTGAGTaGTGCCGGGTTGGTACAAGT +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSGTPIE*CRVGTS
Trigger: ACTTGTACCAACCCGGCACCACTCAATGGGGGTGCC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACTCTCCCTTGGGGAATaGCCCCAGCGGGAATCAGCA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCALSLGE*PQRESA
Trigger: TGCTGATTCCCGCTGGGGCCATTCCCCAAGGGAGAG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTGACACGGTGCAGTTaGGCTGGAAGATCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLTRCS*AGRSAL
Trigger: AAGGGCAGATCTTCCAGCTCAACTGCACCGTGTCAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGCAGTTCCTCAGGGATaGGGATGGCGGAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAAVPQG*GWRRHQ
Trigger: TTGATGCCTCCGCCATCCTCATCCCTGAGGAACTGC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAACCCCCATTGAGTGGTaGCGGGTTGGTACAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSTPIEW*RVGTSP
Trigger: AGGACTTGTACCAACCCGGCACCACTCAATGGGGGT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATGGGGGCTGGCGCCGTaGACTCCCTCCTGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTWGLAP*TPSCAS
Trigger: ACTGGCGCAGGAGGGAGTGCACGGCGCCAGCCCCCA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATCCAGTCCTCGGTATTaGGGTCTGCGCAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSSSPRY*GLRSDA
Trigger: TGCATCACTGCGCAGACCCCAATACCGAGGACTGGA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGTCCTTGTACGTTTCTaGTACCCTCGTCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAVLVRF*YPRPQR
Trigger: CCGCTGTGGACGAGGGTATCAGAAACGTACAAGGAC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACAGAAGCTGAATCCGTaGACCGCGAAGCAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAQKLNP*TAKQSE
Trigger: TTCGGACTGCTTCGCGGTGCACGGATTCAGCTTCTG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453304.6
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTGGGTGGCAGGGCTTaGTTTACAGTACAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLGGRA*FTVQVH
Trigger: GTGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTCGGTATTGGGGTCTaGGCAGTGATGCATAGTGAG +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLGIGV*AVMHSE
Trigger: CTCACTATGCATCACTGCGCAGACCCCAATACCGAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACCTTCTCCTTCCACCTaGCGCACACAGAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSPSPST*RTQSLQ
Trigger: TTGCAAACTCTGTGTGCGGCAGGTGGAAGGAGAAGG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATGCAACTGGGCTCGATaGATTATGTCTGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSCNWAR*IMSGGR
Trigger: TCGCCCTCCAGACATAATGCATCGAGCCCAGTTGCA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTTCAGACTGATGAATaGGACTGGAGGCATCACGGT +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLQTDE*DWRHHG
Trigger: ACCGTGATGCCTCCAGTCTCATTCATCAGTCTGAAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCATCCGTAGATATGCAATaGGCACATACGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCASVDMQ*AHTPSG
Trigger: GCCGGAAGGCGTATGTGCGCATTGCATATCTACGGA...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGATGTGGCAGGCCTCTaGATCCAGCTGAATGTAGCA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCADVAGL*IQLNVA
Trigger: TGCTACATTCAGCTGGATGCAGAGGCCTGCCACATC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCATGCCTTGCTAGACTCTaGTTCTTCAGGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCACLARL*FFRLRA
Trigger: AGCCCTCAGCCTGAAGAACCAGAGTCTAGCAAGGCA...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAAGGCGTAACATAGCCTaGGCAAAAGACCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSRRNIA*AKDQLM
Trigger: CATCAGCTGGTCTTTTGCCCAGGCTATGTTACGCCT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATGGCTGCAGCTGACGTaGGGTCTGGGGGTACAGCCA +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTWLQLT*GLGVQP
Trigger: TGGCTGTACCCCCAGACCTCACGTCAGCTGCAGCCA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACGGGAATCAGCAAGCTaGCTCCTGAATTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCARESAS*LLNWEQ
Trigger: TTGTTCCCAATTCAGGAGTCAGCTTGCTGATTCCCG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACTGCAGTCTTGCCTGTaGAGTGCATTGGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCALQSCL*SALVSS
Trigger: AGATGAGACCAATGCACTTCACAGGCAAGACTGCAG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGGTCGTGTGGTTAAATaGCTTTCTCAAGGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAGRVVK*LSQGGA
Trigger: TGCGCCACCTTGAGAAAGTCATTTAACCACACGACC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACGACCTTTCTGCAGTTaGACTGTTCCAAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCARPFCS*TVPKGT
Trigger: TGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGAATCAGGAGCAGTCTaGATGCAAAGCCCATCAGTG +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAESGAV*MQSPSV
Trigger: CACTGATGGGCTTTGCATGCAGACTGCTCCTGATTC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCATTCTTCCAAGACAGCTaGCAGCATGCTCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAFFQDS*QHAQVS
Trigger: GGAAACCTGAGCATGCTGGCAGCTGTCTTGGAAGAA...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAAATAATTGGTGGGCTTaGTGTGCCAGTACACTTGCG +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSNNWWA*CASTLA
Trigger: CGCAAGTGTACTGGCACAGCAAGCCCACCAATTATT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAACAAACCAAGGGGACTaGAGGGAAAATCAGGATTGG +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSTNQGD*RENQDW
Trigger: CCAATCCTGATTTTCCCTGCAGTCCCCTTGGTTTGT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATCCATTCTTGGGGGCTaGCGCCGTGCACTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTSILGG*RRALPP
Trigger: AGGAGGGAGTGCACGGCGCCAGCCCCCAAGAATGGA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACCTTGCCTCCATTCTTaGGGGCTGGCGCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTPCLHS*GLAPCT
Trigger: AGTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACATCAGTGCAGTTCTTaGATTGCAAGACGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAHQCSS*IARRGR
Trigger: ACGGCCTCGTCTTGCAATCCAAGAACTGCACTGATG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACAGGATTACGCCAGTTaGGCTGGATTTGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAQDYAS*AGFGGK
Trigger: TTTGCCACCAAATCCAGCCCAACTGGCGTAATCCTG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGCTGCTAATAATTGGTaGGCTTGCTGTGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSAANNW*ACCAST
Trigger: TGTACTGGCACAGCAAGCCCACCAATTATTAGCAGC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGTACATGGCTGCAGCTaGCGTGAGGTCTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGVHGCS*REVWGY
Trigger: GTACCCCCAGACCTCACGTCAGCTGCAGCCATGTAC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGCTGAAGGAACAGACTaGCAAAGCCATTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSAEGTD*QSHSAF
Trigger: AAATGCTGAATGGCTTTGTCAGTCTGTTCCTTCAGC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACATCACGGTGGAAGTTaGGCATTTCAGAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAHHGGS*AFQNLE
Trigger: CTCCAAGTTCTGAAATGCTCAACTTCCACCGTGATG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAGGATGGGGGTTTTCTaGATAGCAGAGGTGACTGTT +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCARMGVF*IAEVTV
Trigger: AACAGTCACCTCTGCTATGCAGAAAACCCCCATCCT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACTGGAGGGCGAGGGCTaGGCTACCAATGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTLEGEG*ATNGRS
Trigger: AGATCTGCCATTGGTAGCGCAGCCCTCGCCCTCCAG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATTTCAGGTTGGGCAGTaGATCCAGAATTGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSFQVGQ*IQNWRV
Trigger: AACTCTCCAATTCTGGATCCACTGCCCAACCTGAAA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCTCTCCCTTGGGGAATaGCCCCAGCGGGAATCAGCA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLSLGE*PQRESA
Trigger: TGCTGATTCCCGCTGGGGCCATTCCCCAAGGGAGAG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATCATGGCCTCTCGTCTaGGGGGCATCCAGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTSWPLV*GASRLL
Trigger: TAGCAGCCTGGATGCCCCCCAGACGAGAGGCCATGA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCATTTCCCCTTCCAGCATaGTGGTTAATACTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAFPLPA*WLILPF
Trigger: GAAGGGCAGTATTAACCACCATGCTGGAAGGGGAAA...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAGGCACACCCGGAGCTaGTATCCCTCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTRHTRS*YPSPPP
Trigger: TGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 72 bp CTGCTAATAATTGGTGGGCTTGCTGTGCCAGTACACTaGCGGAGTACCTGTTGGTTTGTCCTGCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: LLIIGGLAVPVH*RSTCWFVLLMP
Trigger: GGGCATCAGCAGGACAAACCAACAGGTACTCCGCAAGTGTACTGGCACAGCAAGCCCACCAATTATTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAGACGCGCAAACAGCTaGAAGCCCCACTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTRRANS*KPHWAE
Trigger: TTCTGCCCAGTGGGGCTTTCAGCTGTTTGCGCGTCT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453304.6
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGACCTCCCAGCGAGTTaGAGCTGCCAAATGCGGTAC +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTDLPAS*SCQMRY
Trigger: GTACCGCATTTGGCAGCTTCAACTCGCTGGGAGGTC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGGACGACTGGGCGGGTaGGCAGAGCTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLGRLGG*AELLGA
Trigger: GGCCCCCAGGAGCTCTGCTCACCCGCCCAGTCGTCC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGGACGACTGGGCGGGTaGGCAGAGCTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRGRLGG*AELLGA
Trigger: GGCCCCCAGGAGCTCTGCTCACCCGCCCAGTCGTCC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CCTCTCCTGCTTTTAAGAGACAGGACTAGCAGAGTGATCTTGAGCCCGCTGTTTCGCCGAGGAGGAGTTTaGAGGTCCCTCTTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PLLLLRDRTSRVILSPLFRRGGV*RSLFPN
Trigger: ATTGGGAAAGAGGGACCTTCAAACTCCTCCTCGGCG...AAACAGCGGGCTCAAGATCACTCTGCTAGTCCTGTCTCTTAAAAGCAGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAACACAGGTGTAATTTaGAGTATCAGAGAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCANTGVI*SIRESG
Trigger: GCCCGACTCTCTGATACTGCAAATTACACCTGTGTT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATCCATGGCGTCCACCTaGCATCCACTGGGCATAACG +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTSMAST*HPLGIT
Trigger: CGTTATGCCCAGTGGATGGCAGGTGGACGCCATGGA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACCGTGCACTCCCTCCTaGGCCAGTGGGTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQPCTPS*ASGCTQ
Trigger: CTGAGTGCACCCACTGGCGCAGGAGGGAGTGCACGG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATATTGGGGGCTGGCGCCGTaGACTCCCTCCTGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: QFSSKLDIGKVSAPEKAYWGLAP*TPSCAS
Trigger: ACTGGCGCAGGAGGGAGTGCACGGCGCCAGCCCCCA...ATATGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGTCTTGCCTGTGAAGTaGATTGGTCTCATCTGGATT +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAVLPVK*IGLIWI
Trigger: AATCCAGATGAGACCAATGCACTTCACAGGCAAGAC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAAATCACTGTCTTCCCTaGAGTGCTACAGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSNHCLP*SATALF
Trigger: GAATAAAGCTGTAGCACTGCAGGGAAGACAGTGATT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACAGTGGATCCAGAATTaGAGAGTTGGTCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAQWIQN*RVGHWD
Trigger: ATCCCAATGACCAACTCTCCAATTCTGGATCCACTG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp ATAAGATCGATACAGAATTATCTGGATCGTAACTTCCCCGTGGTCTCAACTTCCCCACTGGGCAGAAGCTaGATCCGTGCACCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: IRSIQNYLDRNFPVVSTSPLGRS*IRAPRS
Trigger: GCTTCGCGGTGCACGGATTCAGCTTCTGCCCAGTGG...GGAAGTTGAGACCACGGGGAAGTTACGATCCAGATAATTCTGTATCGATCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATGGCTGCAGCTGACGTaGGGTCTGGGGGTACAGCCA +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQWLQLT*GLGVQP
Trigger: TGGCTGTACCCCCAGACCTCACGTCAGCTGCAGCCA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTTCCTCCTCAGCTGTaGTTCACCTGGACGGCCACA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGFPPQL*FTWTAT
Trigger: TGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATTGTTAAAGAGCTTGTaGTGGTCCCAAGGAAACATA +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLLKSL*WSQGNI
Trigger: TATGTTTCCTTGGGACCATCACAAGCTCTTTAACAA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGCAGTTCCTCAGGGATaGGGATGGCGGAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLAVPQG*GWRRHQ
Trigger: TTGATGCCTCCGCCATCCTCATCCCTGAGGAACTGC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACTTGATTTCCATAGATaGTTCCACAACCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCALDFHR*FHNPGT
Trigger: AGTACCAGGGTTGTGGAATCATCTATGGAAATCAAG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATATGTTGTGTATGAATaGGTTGATGTACTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSYVVYE*VDVLGS
Trigger: TGAGCCCAGTACATCAACTCATTCATACACAACATA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACTGCTTTCTTCCCTTTaGTTAACAACCCCAATTTTC +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLLSSL*LTTPIF
Trigger: GAAAATTGGGGTTGTTAATCAAAGGGAAGAAAGCAG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGGGACAGTAGGTGGATaGCACTGCCTCTTCAACACG +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGGTVGG*HCLFNT
Trigger: CGTGTTGAAGAGGCAGTGTCATCCACCTACTGTCCC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGGGACAGTAGGTGGATaGCACTGCCTCTTCAACACG +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTGTVGG*HCLFNT
Trigger: CGTGTTGAAGAGGCAGTGTCATCCACCTACTGTCCC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CCTCTCCTGCTTTTAAGAGACAGGACTAGCAGAGTGATCTTGAGCCCGCTGTTTGGTAGCACGAGCATTTaGAGCAAGTATCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PLLLLRDRTSRVILSPLFGSTSI*SKYPSP
Trigger: GGGACTGGGATACTTGCTGCAAATGCTCGTGCTACC...AAACAGCGGGCTCAAGATCACTCTGCTAGTCCTGTCTCTTAAAAGCAGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp CCTCTCCTGCTTTTAAGAGACAGGACTAGCAGAGTGATCTTGAGCCCGCTGTTTTCCGTAGATATGCAATaGGCACATACGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PLLLLRDRTSRVILSPLFSVDMQ*AHTPSG
Trigger: GCCGGAAGGCGTATGTGCGCATTGCATATCTACGGA...AAACAGCGGGCTCAAGATCACTCTGCTAGTCCTGTCTCTTAAAAGCAGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTGGGGGCTGGCGCCGTaGACTCCCTCCTGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLWGLAP*TPSCAS
Trigger: ACTGGCGCAGGAGGGAGTGCACGGCGCCAGCCCCCA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCTCCCACTGTCCCTGTaGTGCCTGGTTCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLPLSL*CLVLEQ
Trigger: CTGCTCAAGAACCAGGCAGCACAGGGACAGTGGGAG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACCCTACATGTACAGATaGCATTTGTTACTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAPYMYR*HLLLSG
Trigger: TCCCGAAAGTAACAAATGGCATCTGTACATGTAGGG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGTCTCAACTTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGCGCGAGCGACTGCTCTaGCCCCACTTGGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GLNFLSLRIRMLLSFWYRRERLL*PHLGSP
Trigger: TGGACTTCCCAAGTGGGGGCAGAGCAGTCGCTCGCG...CCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAAGTTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATCCATTCTTGGGGGCTaGCGCCGTGCACTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQSILGG*RRALPP
Trigger: AGGAGGGAGTGCACGGCGCCAGCCCCCAAGAATGGA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATCCAGTCCTCGGTATTaGGGTCTGCGCAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTSSPRY*GLRSDA
Trigger: TGCATCACTGCGCAGACCCCAATACCGAGGACTGGA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGCTTCGCAGCCGCTTTaGTGGTGGAATGTCCTACCA +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTASQPL*WWNVLP
Trigger: TGGTAGGACATTCCACCACCAAAGCGGCTGCGAAGC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAAGACCTTTGAATTCTaGGGAGATGGTGATCACCTT +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAKTFEF*GDGDHL
Trigger: AAGGTGATCACCATCTCCCCAGAATTCAAAGGTCTT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGAAGCCATCTGCTCTGCCCCCACTTaGGAAGTCCAGGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: FLSLRIRMLLSFWYREAICSAPT*EVQGGA
Trigger: TGCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCA...GATGGCTTCCCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR TCA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATGGCTGCAGCTGACGTaGGGTCTGGGGGTACAGCCA +
Preference number: 4 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKAWLQLT*GLGVQP
Trigger: TGGCTGTACCCCCAGACCTCACGTCAGCTGCAGCCA...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGAACGACTGGGTCATCTaGGGGGACAGCTTGGACGTA +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLNDWVI*GDSLDV
Trigger: TACGTCCAAGCTGTCCCCTCAGATGACCCAGTCGTT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGGGGTCAAAAGTGTCTaGGAGTCATCCATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLGVKSV*ESSMGG
Trigger: GCCACCCATGGATGACTCTCAGACACTTTTGACCCC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTTGGGGTCTGCGCAGTaGTGCATAGTGAGGACGACT +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLGSAQ*CIVRTT
Trigger: AGTCGTCCTCACTATGCATCACTGCGCAGACCCCAA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGAATGGGCGATATCGTaGATTGACAGGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGEWAIS*IDRRRL
Trigger: CAACCTGCGCCTGTCAATTCACGATATCGCCCATTC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATGTCATAAAGGTCCTTaGACTCTACAGGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSCHKGP*TLQVFI
Trigger: AATGAAAACCTGTAGAGTTCAAGGACCTTTATGACA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAGTTTCAGGGTGTCCTaGACTCAGTCCCCACGACTT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTSFRVS*TQSPRL
Trigger: AAGTCGTGGGGACTGAGTTCAGGACACCCTGAAACT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCACATTATCTTGAGCAATaGTGTACTGCTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSHYLEQ*CTASQK
Trigger: CTTTTGTGAAGCAGTACATCATTGCTCAAGATAATG...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCAGGTCCCCATTCTCTaGTGCTGCCTCCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLQVPIL*CCLHSA
Trigger: AGCACTATGGAGGCAGCATCAGAGAATGGGGACCTG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGGTAGCACGAGCATTTaGAGCAAGTATCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTGSTSI*SKYPSP
Trigger: GGGACTGGGATACTTGCTGCAAATGCTCGTGCTACC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453304.6
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCTGGGTGGCAGGGCTTaGTTTACAGTACAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLGGRA*FTVQVH
Trigger: GTGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGGCCGTCGCAGTCCTTaGCTCCATTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPGRRSP*LHSWGL
Trigger: CAGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCC...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTGAGCTGGAAGATCTaGCCTTCTCCTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLSWKI*PSPSTC
Trigger: GCAGGTGGAAGGAGAAGGGCAGATCTTCCAGCTCAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAGACAGCTGCCAGCATaGTCAGGTTTCCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTRQLPA*SGFHLG
Trigger: TCCCAGATGGAAACCTGAGCATGCTGGCAGCTGTCT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTAGACAGCTGCCAGCATaGTCAGGTTTCCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGRQLPA*SGFHLG
Trigger: TCCCAGATGGAAACCTGAGCATGCTGGCAGCTGTCT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGACCAAGAGCACAGCTaGTGTGATCCTGACAGAGAC +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTDQEHS*CDPDRD
Trigger: GTCTCTGTCAGGATCACAGCAGCTGTGCTCTTGGTC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACTGGAGGGCGAGGGCTaGGCTACCAATGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETLEGEG*ATNGRS
Trigger: AGATCTGCCATTGGTAGCGCAGCCCTCGCCCTCCAG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCCCTTGCCTCCATTCTTaGGGGCTGGCGCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSPCLHS*GLAPCT
Trigger: AGTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGG...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATGCCTTGCTAGACTCTaGTTCTTCAGGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTCLARL*FFRLRA
Trigger: AGCCCTCAGCCTGAAGAACCAGAGTCTAGCAAGGCA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTACGGTGCAGTTGAGCTaGAAGATCTGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGTVQLS*KICPSP
Trigger: AGGAGAAGGGCAGATCTTCCAGCTCAACTGCACCGT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCATAGGGAGTCGACGTaGGGCCACACAACGGCAATA +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLHREST*GHTTAI
Trigger: TATTGCCGTTGTGTGGCCCCACGTCGACTCCCTATG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAATGAGTTGATGTACTaGGCTCACAGTGACCTAATA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCANELMY*AHSDLI
Trigger: TATTAGGTCACTGTGAGCCCAGTACATCAACTCATT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTGCGGAGTACCTGTTaGTTTGTCCTGCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLRSTC*FVLLMP
Trigger: GGGCATCAGCAGGACAAACCAACAGGTACTCCGCAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAAGTCCAGTAGACCTTTaGAACTTAAAAATGACACAC +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSSPVDL*NLKMTH
Trigger: GTGTGTCATTTTTAAGTTCCAAAGGTCTACTGGACT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGAAGCCATCAGACGCGCAAACAGCTaGAAGCCCCACTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FLSLRIRMLLSFWYREAIRRANS*KPHWAE
Trigger: TTCTGCCCAGTGGGGCTTTCAGCTGTTTGCGCGTCT...GATGGCTTCCCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCAGAAGGCACCCCCATTaGGTGGTGCCGGGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSRRHPH*VVPGWY
Trigger: GTACCAACCCGGCACCACTCAATGGGGGTGCCTTCT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTCTGGTTCTTCAGGCTaGGGGCTTCATTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGSGSSG*GLHSPT
Trigger: TGTTGGAGAATGAAGCCCTCAGCCTGAAGAACCAGA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGACCTCCCAGCGAGTTaGAGCTGCCAAATGCGGTAC +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQDLPAS*SCQMRY
Trigger: GTACCGCATTTGGCAGCTTCAACTCGCTGGGAGGTC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCGGGAATCAGCAAGCTaGCTCCTGAATTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGRESAS*LLNWEQ
Trigger: TTGTTCCCAATTCAGGAGTCAGCTTGCTGATTCCCG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACAAAGATGGCCAGCTTaGGGCGCTTCGCAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSQRWPA*GASQPL
Trigger: AAGCGGCTGCGAAGCGCCTCAAGCTGGCCATCTTTG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGAATGGGCGATATCGTaGATTGACAGGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLEWAIS*IDRRRL
Trigger: CAACCTGCGCCTGTCAATTCACGATATCGCCCATTC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGCCAGTAGGTTCCTCTaGCACGGTGCAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQASRFL*HGAVEL
Trigger: CAGCTCAACTGCACCGTGTCAGAGGAACCTACTGGC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACATTATCTTGAGCAATaGTGTACTGCTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAHYLEQ*CTASQK
Trigger: CTTTTGTGAAGCAGTACATCATTGCTCAAGATAATG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTCTACACACCAGTACTaGGGGTTATTCCACCCCGGA +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLSTHQY*GLFHPG
Trigger: TCCGGGGTGGAATAACCCTCAGTACTGGTGTGTAGA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGTCTCAACTTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGCCAATGCCTTCTAACTaGCGTCTCCCGCGAGCGACT +
Preference number: 4 (lower is better)
Translates to: GLNFLSLRIRMLLSFWYRPMPSN*RLPRAT
Trigger: AGTCGCTCGCGGGAGACGTCAGTTAGAAGGCATTGG...CCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAAGTTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAACCGTGCACTCCCTCCTaGGCCAGTGGGTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKPCTPS*ASGCTQ
Trigger: CTGAGTGCACCCACTGGCGCAGGAGGGAGTGCACGG...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCTCGGTATTGGGGTCTaGGCAGTGATGCATAGTGAG +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLGIGV*AVMHSE
Trigger: CTCACTATGCATCACTGCGCAGACCCCAATACCGAG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTTGAGCTGGAAGATCTaGCCTTCTCCTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLSWKI*PSPSTC
Trigger: GCAGGTGGAAGGAGAAGGGCAGATCTTCCAGCTCAA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTCTTCCAAGACAGCTaGCAGCATGCTCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGFFQDS*QHAQVS
Trigger: GGAAACCTGAGCATGCTGGCAGCTGTCTTGGAAGAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTGAAGAGCCTAACTTaGTCACAGCAGGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLKSLT*SQQDGG
Trigger: ACCCCCATCCTGCTGTGAGCAAGTTAGGCTCTTCAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAACTGTCACGACATTCTaGAGAGATTCCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTTVTTF*RDSQPG
Trigger: CCCAGGTTGGGAATCTCTGCAGAATGTCGTGACAGT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACACAGTGATGTTCCCTaGAACTGGGCTCGATGCATT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTHSDVP*NWARCI
Trigger: AATGCATCGAGCCCAGTTGCAGGGAACATCACTGTG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TTAAAGCAGCACTACATTCATCCTTTGGAACAGCATAGTGGTTTCTCTTCTCATTCTCCCGCGAGCGACTaGTCTGCCCCCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LKQHYIHPLEQHSGFSSHSPASD*SAPTWE
Trigger: TTCCCAAGTGGGGGCAGAGCAGTCGCTCGCGGGAGA...ATGAGAAGAGAAACCACTATGCTGTTCCAAAGGATGAATGTAGTGCTGCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CCA 90 bp CCTCTCCTGCTTTTAAGAGACAGGACTAGCAGAGTGATCTTGAGCCCGCTGTTTAGTTCTTCCACTTGCTaGCGCGAAATCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: PLLLLRDRTSRVILSPLFSSSTC*REISML
Trigger: GAGCATTGAGATTTCGCGCCAGCAAGTGGAAGAACT...AAACAGCGGGCTCAAGATCACTCTGCTAGTCCTGTCTCTTAAAAGCAGGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CCA 90 bp TTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGAAGCCATCTTCCACCTCAGCCACTaGGATCCCTTCAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FLSLRIRMLLSFWYREAIFHLSH*DPFRWS
Trigger: CGACCACCTGAAGGGATCCCAGTGGCTGAGGTGGAA...GATGGCTTCCCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CCA 90 bp CAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATATTCCATTCTTGGGGGCTaGCGCCGTGCACTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QFSSKLDIGKVSAPEKAYSILGG*RRALPP
Trigger: AGGAGGGAGTGCACGGCGCCAGCCCCCAAGAATGGA...ATATGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp TCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAACCTTGCCTCCATTCTTaGGGGCTGGCGCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: SIVQFSSKLDIGKVSAPEPCLHS*GLAPCT
Trigger: AGTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGG...TTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCCATAGTGAGGACGACTaGGCGGGTGAGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSHSEDD*AGEQSS
Trigger: GGAGCTCTGCTCACCCGCCCAGTCGTCCTCACTATG...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATCGCAGCCGCTTTGGTaGTGGAATGTCCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQSQPLW*WNVLPG
Trigger: CCCTGGTAGGACATTCCACCACCAAAGCGGCTGCGA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAGGACAAATCTGAAATaGTATGTTAAAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCARTNLK*YVKRLA
Trigger: TGCCAGCCTTTTAACATACCATTTCAGATTTGTCCT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATTCTCTGACAAACATTaGTGTCTTCTTTACAAAGAG +
Preference number: 4 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSFSDKH*CLLYKE
Trigger: CTCTTTGTAAAGAAGACACCAATGTTTGTCAGAGAA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCAGGCACACCCGGAGCTaGTATCCCTCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSRHTRS*YPSPPP
Trigger: TGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCCACTGGGCAGAAGCTaGATCCGTGCACCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLPLGRS*IRAPRS
Trigger: GCTTCGCGGTGCACGGATTCAGCTTCTGCCCAGTGG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453304.6
CDS-3UTR TCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCCCACTGGGCAGAAGCTaGATCCGTGCACCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVPLGRS*IRAPRS
Trigger: GCTTCGCGGTGCACGGATTCAGCTTCTGCCCAGTGG...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGTCCTTGTACGTTTCTaGTACCCTCGTCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQVLVRF*YPRPQR
Trigger: CCGCTGTGGACGAGGGTATCAGAAACGTACAAGGAC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAAACGACTGGGTCATCTaGGGGGACAGCTTGGACGTA +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQNDWVI*GDSLDV
Trigger: TACGTCCAAGCTGTCCCCTCAGATGACCCAGTCGTT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATTTCCTCCTCAGCTGTaGTTCACCTGGACGGCCACA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETFPPQL*FTWTAT
Trigger: TGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCTGCAGTCTTGCCTGTaGAGTGCATTGGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLQSCL*SALVSS
Trigger: AGATGAGACCAATGCACTTCACAGGCAAGACTGCAG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTCCCCACCTGCTGAATaGATTGAGTCCTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGSPPAE*IESLCL
Trigger: CAAACACAAGGACTCAATTCATTCAGCAGGTGGGGA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCCACAACCCTGGTACTaGTGCGTAATCTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGPQPWY*CVILTS
Trigger: ACTTGTCAAGATTACGCATCAGTACCAGGGTTGTGG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACTTTGCCAGGAGAAGTaGAAAGTCTTGATTCCACCC +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTLCQEK*KVLIPP
Trigger: GGGTGGAATCAAGACTTTTCACTTCTCCTGGCAAAG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGTCTCAACTTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGCAGAAGCTGAATCCGTaGACCGCGAAGCAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: GLNFLSLRIRMLLSFWYRQKLNP*TAKQSE
Trigger: TTCGGACTGCTTCGCGGTGCACGGATTCAGCTTCTG...CCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAAGTTGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAACCCCCATTGAGTGGTaGCGGGTTGGTACAAGTCCT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQTPIEW*RVGTSP
Trigger: AGGACTTGTACCAACCCGGCACCACTCAATGGGGGT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGGCCGTCGCAGTCCTTaGCTCCATTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLGRRSP*LHSWGL
Trigger: CAGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGAATCAGGAGCAGTCTaGATGCAAAGCCCATCAGTG +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLESGAV*MQSPSV
Trigger: CACTGATGGGCTTTGCATGCAGACTGCTCCTGATTC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACACAGATCTTGTCTTGCTaGCTTGATGTTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTQILSC*LDVHRL
Trigger: CAGCCTGTGAACATCAAGGCAGCAAGACAAGATCTG...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCAGCAGATCTTGTCTTaGTGCCTTGATGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGQQILS*CLDVHR
Trigger: CCTGTGAACATCAAGGCAGCAAGACAAGATCTGCTG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGACAGTAGACTCGGATaGTGTACTCCAGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETDSRLG*CTPARS
Trigger: GCTCCTCGCTGGAGTACAGCATCCGAGTCTACTGTC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTTGAAGAGCCTAACTTaGTCACAGCAGGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLKSLT*SQQDGG
Trigger: ACCCCCATCCTGCTGTGAGCAAGTTAGGCTCTTCAA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATGGCTAGACTTAGTCTaGAGAGAAAACCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTWLDLV*RENPPS
Trigger: ACTGGGTGGGTTTTCTCTGCAGACTAAGTCTAGCCA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCCGCGAGCGACTGCTCTaGCCCCACTTGGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVRERLL*PHLGSP
Trigger: TGGACTTCCCAAGTGGGGGCAGAGCAGTCGCTCGCG...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCATCTCCCGCGAGCGACTaGTCTGCCCCCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSASPASD*SAPTWE
Trigger: TTCCCAAGTGGGGGCAGAGCAGTCGCTCGCGGGAGA...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAAAAAGTCATCATCTTaGGCGGCGGAGCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETKKSSS*AAEPVP
Trigger: CGGCACTGGCTCCGCCGCCCAAGATGATGACTTTTT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453304.6
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTTCCACCTCAGCCACTaGGATCCCTTCAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSFHLSH*DPFRWS
Trigger: CGACCACCTGAAGGGATCCCAGTGGCTGAGGTGGAA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATTCCACCTCAGCCACTaGGATCCCTTCAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKAFHLSH*DPFRWS
Trigger: CGACCACCTGAAGGGATCCCAGTGGCTGAGGTGGAA...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTCCACCTCAGCCACTaGGATCCCTTCAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSFHLSH*DPFRWS
Trigger: CGACCACCTGAAGGGATCCCAGTGGCTGAGGTGGAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATCCCTCCTGCGCCAGTaGGTGCACTCAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSSLLRQ*VHSVPQ
Trigger: TTGTGGAACTGAGTGCACCCACTGGCGCAGGAGGGA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCATCAGTGCAGTTCTTaGATTGCAAGACGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLHQCSS*IARRGR
Trigger: ACGGCCTCGTCTTGCAATCCAAGAACTGCACTGATG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAACTCTCCCTTGGGGAATaGCCCCAGCGGGAATCAGCA +
Preference number: 4 (lower is better)
Translates to: SIVQFSSKLDIGKVSAPELSLGE*PQRESA
Trigger: TGCTGATTCCCGCTGGGGCCATTCCCCAAGGGAGAG...TTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACAGCCGCTTTGGTGGTaGAATGTCCTACCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSQPLWW*NVLPGR
Trigger: ACGCCCTGGTAGGACATTCCACCACCAAAGCGGCTG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTCGCAGCCGCTTTGGTaGTGGAATGTCCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSSQPLW*WNVLPG
Trigger: CCCTGGTAGGACATTCCACCACCAAAGCGGCTGCGA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGATGTCCGAGTAAAGTaGGCATGTACATGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTDVRVK*ACTWAV
Trigger: AACTGCCCATGTACATGCCCACTTTACTCGGACATC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGAGGCGTAACATAGCCTaGGCAAAAGACCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLRRNIA*AKDQLM
Trigger: CATCAGCTGGTCTTTTGCCCAGGCTATGTTACGCCT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTACTCAGAAGCTAGTTaGGCCACAACTGTCACGACA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGYSEAS*ATTVTT
Trigger: TGTCGTGACAGTTGTGGCCCAACTAGCTTCTGAGTA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTCTTGTCCATGGCCTaGAGGAGTAGACATCTGAGT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGFLSMA*RSRHLS
Trigger: ACTCAGATGTCTACTCCTCCAGGCCATGGACAAGAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCATGCTCTGCCCCCACTTaGGAAGTCCAGGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSACSAPT*EVQGGA
Trigger: TGCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCA...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAAGAAGGCACCCCCATTaGGTGGTGCCGGGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKRRHPH*VVPGWY
Trigger: GTACCAACCCGGCACCACTCAATGGGGGTGCCTTCT...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATTGATGTTCACAGGCTaGAAGCCCCCATTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETLMFTG*KPPLSA
Trigger: GGCACTCAATGGGGGCTTTCAGCCTGTGAACATCAA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCGTACATGGCTGCAGCTaGCGTGAGGTCTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVVHGCS*REVWGY
Trigger: GTACCCCCAGACCTCACGTCAGCTGCAGCCATGTAC...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTAGGTGTTGTACACTTTaGTTTTCAGGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGRCCTL*FSGWAV
Trigger: CACTGCCCAACCTGAAAATCAAAGTGTACAACACCT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACAAAGATGGCCAGCTTaGGGCGCTTCGCAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRQRWPA*GASQPL
Trigger: AAGCGGCTGCGAAGCGCCTCAAGCTGGCCATCTTTG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGGCGATATCGTGAATTaGCAGGCGCAGGTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSGDIVN*QAQVVG
Trigger: ACCCACAACCTGCGCCTGTCAATTCACGATATCGCC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGCTGAAGGAACAGACTaGCAAAGCCATTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTAEGTD*QSHSAF
Trigger: AAATGCTGAATGGCTTTGTCAGTCTGTTCCTTCAGC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCATCACGGTGGAAGTTaGGCATTTCAGAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLHHGGS*AFQNLE
Trigger: CTCCAAGTTCTGAAATGCTCAACTTCCACCGTGATG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAAAAAGCATCTGAAGTaGACCCCAAGGGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTKKHLK*TPRVLS
Trigger: ACTGAGAACCCTTGGGGTTCACTTCAGATGCTTTTT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTAAGGGTTCTGACAGATaGGTACCTCACACACGAAAT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGKGSDR*VPHTRN
Trigger: ATTTCGTGTGTGAGGTACTCATCTGTCAGAACCCTT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CCTCTCCTGCTTTTAAGAGACAGGACTAGCAGAGTGATCTTGAGCCCGCTGTTTCATGGCCTAAGAAAATaGAGACCCAAAGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: PLLLLRDRTSRVILSPLFHGLRK*RPKDAV
Trigger: AACTGCATCTTTGGGTCTTCATTTTCTTAGGCCATG...AAACAGCGGGCTCAAGATCACTCTGCTAGTCCTGTCTCTTAAAAGCAGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATCCGTAGATATGCAATaGGCACATACGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETSVDMQ*AHTPSG
Trigger: GCCGGAAGGCGTATGTGCGCATTGCATATCTACGGA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAACCCCCATTGAGTGGTaGCGGGTTGGTACAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPTPIEW*RVGTSP
Trigger: AGGACTTGTACCAACCCGGCACCACTCAATGGGGGT...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp TCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAATCCATGGCGTCCACCTaGCATCCACTGGGCATAACG +
Preference number: 4 (lower is better)
Translates to: SIVQFSSKLDIGKVSAPESMAST*HPLGIT
Trigger: CGTTATGCCCAGTGGATGGCAGGTGGACGCCATGGA...TTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCCTGCTACAGAGCTTCTaGCGGATAGGGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSLLQSF*RIGRGM
Trigger: CATCCCTCTCCCTATCCGGCAGAAGCTCTGTAGCAG...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGTCTTGCCTGTGAAGTaGATTGGTCTCATCTGGATT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGVLPVK*IGLIWI
Trigger: AATCCAGATGAGACCAATGCACTTCACAGGCAAGAC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATGCAACTGGGCTCGATaGATTATGTCTGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQCNWAR*IMSGGR
Trigger: TCGCCCTCCAGACATAATGCATCGAGCCCAGTTGCA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCCTCTTCAACACGACTaGTGGGGATTTTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLPLQHD*WGFFSD
Trigger: GTCAGAGAAAAATCCCCAGCAGTCGTGTTGAAGAGG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGAGTTCTTCCACTTGCTaGCGCGAAATCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLSSSTC*REISML
Trigger: GAGCATTGAGATTTCGCGCCAGCAAGTGGAAGAACT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATCATGGCCTCTCGTCTaGGGGGCATCCAGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRSWPLV*GASRLL
Trigger: TAGCAGCCTGGATGCCCCCCAGACGAGAGGCCATGA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGCCTGTGAAGTGCATTaGTCTCATCTGGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLACEVH*SHLDFL
Trigger: GAGGAAATCCAGATGAGACCAATGCACTTCACAGGC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATCAGCTGTGTTTCCATaGGACCCCTCTCATTCATTA +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTSAVFP*DPSHSL
Trigger: TAATGAATGAGAGGGGTCCCATGGAAACACAGCTGA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGGAAATGACTTCATTTaGCTTTCCTGGCCTGTATGG +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGGNDFI*LSWPVW
Trigger: CCATACAGGCCAGGAAAGCCAAATGAAGTCATTTCC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTACTCAGAAGCTAGTTaGGCCACAACTGTCACGACA +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLYSEAS*ATTVTT
Trigger: TGTCGTGACAGTTGTGGCCCAACTAGCTTCTGAGTA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATCGATGCATTATGTCTaGAGGGCGAGGGCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSSMHYV*RARAAL
Trigger: TAGCGCAGCCCTCGCCCTCCAGACATAATGCATCGA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 72 bp GGGCTTACACTGAGTTCTCCACATGAAACTGATGACTaGTCCAGAACAACTGCCCAGCAAAAGCTAAGACTC +
Preference number: 4 (lower is better)
Translates to: GLTLSSPHETDD*SRTTAQQKLRL
Trigger: GAGTCTTAGCTTTTGCTGGGCAGTTGTTCTGGACAAGTCATCAGTTTCATGTGGAGAACTCAGTGTAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 72 bp GACAAAGCACAAAACCTCAATCCGACCTTTCTGCAGTaGAACTGTTCCAAAGGGGACAGTAGGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: DKAQNLNPTFLQ*NCSKGDSRWMT
Trigger: TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATTGAGGTTTTGTGCTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTTGATGTTCACAGGCTaGAAGCCCCCATTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSLMFTG*KPPLSA
Trigger: GGCACTCAATGGGGGCTTTCAGCCTGTGAACATCAA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCATTGATGTTCACAGGCTaGAAGCCCCCATTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPLMFTG*KPPLSA
Trigger: GGCACTCAATGGGGGCTTTCAGCCTGTGAACATCAA...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGGGGGTGACAGCACCTaGGGTGTTGTACACTTTGAT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSGGDST*GVVHFD
Trigger: ATCAAAGTGTACAACACCTCAGGTGCTGTCACCCCC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGACCTCCCAGCGAGTTaGAGCTGCCAAATGCGGTAC +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKDLPAS*SCQMRY
Trigger: GTACCGCATTTGGCAGCTTCAACTCGCTGGGAGGTC...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGCCAGTAGGTTCCTCTaGCACGGTGCAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRASRFL*HGAVEL
Trigger: CAGCTCAACTGCACCGTGTCAGAGGAACCTACTGGC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACTTCAGACTGATGAATaGGACTGGAGGCATCACGGT +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETLQTDE*DWRHHG
Trigger: ACCGTGATGCCTCCAGTCTCATTCATCAGTCTGAAG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAAACAGCATAATGCAATaGTGCAGAGCGACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQNSIMQ*CRATQA
Trigger: GGCCTGAGTCGCTCTGCATCATTGCATTATGCTGTT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTTTGCTACTGGGCTTTaGTTCTTTAATCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLFATGL*FFNPHL
Trigger: CAGGTGGGGATTAAAGAATCAAAGCCCAGTAGCAAA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGCCTTGGGCTTACACTaGGTTCTCCACATGAAACTG +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETALGLH*VLHMKL
Trigger: CAGTTTCATGTGGAGAACTCAGTGTAAGCCCAAGGC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCTGGGGATTTTTCTCTaGCAAACATTGGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLGIFL*QTLVSS
Trigger: AGAAGACACCAATGTTTGTCAGAGAAAAATCCCCAG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCCCAATGCCTTCTAACTaGCGTCTCCCGCGAGCGACT +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVPMPSN*RLPRAT
Trigger: AGTCGCTCGCGGGAGACGTCAGTTAGAAGGCATTGG...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCACTGGGTGGCAGGGCTTaGTTTACAGTACAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKALGGRA*FTVQVH
Trigger: GTGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAG...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAATTTTCTGCACACTCTaGCCTTCACAGAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQIFCTL*PSQKAP
Trigger: GGGTGCCTTCTGTGAAGGGCAGAGTGTGCAGAAAAT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATCCATGGCGTCCACCTaGCATCCACTGGGCATAACG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRSMAST*HPLGIT
Trigger: CGTTATGCCCAGTGGATGGCAGGTGGACGCCATGGA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACAGGAGCAGTCTGCATaGAAAGCCCATCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSQEQSA*KAHQCS
Trigger: ACTGCACTGATGGGCTTTGCATGCAGACTGCTCCTG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTAAAGCCCCCATTGAGTaGCGAAGAGTCAATAATATC +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGKAPIE*RRVNNI
Trigger: GATATTATTGACTCTTCGGCACTCAATGGGGGCTTT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACAGGATGGATCAGTCTaGCTTGCTAGACTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQQDGSV*LARLWF
Trigger: GAACCAGAGTCTAGCAAGGCAGACTGATCCATCCTG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACAGGATGGATCAGTCTaGCTTGCTAGACTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETQDGSV*LARLWF
Trigger: GAACCAGAGTCTAGCAAGGCAGACTGATCCATCCTG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACCACTGTCCCTGTGCTaGCTGGTTCTTGAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSPLSLC*LVLEQY
Trigger: ATACTGCTCAAGAACCAGGCAGCACAGGGACAGTGG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCTCCCACTGTCCCTGTaGTGCCTGGTTCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLPLSL*CLVLEQ
Trigger: CTGCTCAAGAACCAGGCAGCACAGGGACAGTGGGAG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGATGTGGCAGGCCTCTaGATCCAGCTGAATGTAGCA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSDVAGL*IQLNVA
Trigger: TGCTACATTCAGCTGGATGCAGAGGCCTGCCACATC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGTTCAGCAACTTGTGTaGCTCCAGCCTAAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGVQQLV*LQPKSK
Trigger: TTTACTTTTAGGCTGGAGGCACACAAGTTGCTGAAC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGACCAAGAGCACAGCTaGTGTGATCCTGACAGAGAC +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSDQEHS*CDPDRD
Trigger: GTCTCTGTCAGGATCACAGCAGCTGTGCTCTTGGTC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTGGTGGGCTTGCTGTaGCAGTACACTTGCGGAGTA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSLVGLL*QYTCGV
Trigger: TACTCCGCAAGTGTACTGGCACAGCAAGCCCACCAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAACTGTCACGACATTCTaGAGAGATTCCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQTVTTF*RDSQPG
Trigger: CCCAGGTTGGGAATCTCTGCAGAATGTCGTGACAGT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACACAGTGATGTTCCCTaGAACTGGGCTCGATGCATT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQHSDVP*NWARCI
Trigger: AATGCATCGAGCCCAGTTGCAGGGAACATCACTGTG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGGAAGGTCACCAACTTaGTTCAGCTCAACATTAAAC +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGGRSPT*FSSTLN
Trigger: GTTTAATGTTGAGCTGAAGCAAGTTGGTGACCTTCC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TTAAAGCAGCACTACATTCATCCTTTGGAACAGCATAGTGGTTTCTCTTCTCATAAAAAGTCATCATCTTaGGCGGCGGAGCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: LKQHYIHPLEQHSGFSSHKKSSS*AAEPVP
Trigger: CGGCACTGGCTCCGCCGCCCAAGATGATGACTTTTT...ATGAGAAGAGAAACCACTATGCTGTTCCAAAGGATGAATGTAGTGCTGCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATCAGGTGGTCGACACTaGAGTAAGACTTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETSGGRH*SKTSCS
Trigger: GGAACAGGAAGTCTTACTCCAGTGTCGACCACCTGA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGGCACCCCCATTGAGTaGTGCCGGGTTGGTACAAGT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLGTPIE*CRVGTS
Trigger: ACTTGTACCAACCCGGCACCACTCAATGGGGGTGCC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGGCACCCCCATTGAGTaGTGCCGGGTTGGTACAAGT +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKGTPIE*CRVGTS
Trigger: ACTTGTACCAACCCGGCACCACTCAATGGGGGTGCC...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTCCCTCCTGCGCCAGTaGGTGCACTCAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLSLLRQ*VHSVPQ
Trigger: TTGTGGAACTGAGTGCACCCACTGGCGCAGGAGGGA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAATCCCTCCTGCGCCAGTaGGTGCACTCAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKSLLRQ*VHSVPQ
Trigger: TTGTGGAACTGAGTGCACCCACTGGCGCAGGAGGGA...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACAGCCGCTTTGGTGGTaGAATGTCCTACCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRQPLWW*NVLPGR
Trigger: ACGCCCTGGTAGGACATTCCACCACCAAAGCGGCTG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAACGGTGCAGTTGAGCTaGAAGATCTGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSTVQLS*KICPSP
Trigger: AGGAGAAGGGCAGATCTTCCAGCTCAACTGCACCGT...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTCCAGGTTCAGCTTATaGGCCAGCATCCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSSRFSL*ASILQS
Trigger: TGACTGGAGGATGCTGGCCCATAAGCTGAACCTGGA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAAGTGGGCATGTACATaGGCAGTTGTATCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTKWACT*AVVSVF
Trigger: GAAAACAGATACAACTGCCCATGTACATGCCCACTT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTAAGACCTTTGAATTCTaGGGAGATGGTGATCACCTT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGKTFEF*GDGDHL
Trigger: AAGGTGATCACCATCTCCCCAGAATTCAAAGGTCTT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 72 bp CAAGACAGTGACAGACCCACAATGAGAACTGGTTTCTaGATCTCCAGTTTAGAGTCCATTCCTCCAACCACA +
Preference number: 4 (lower is better)
Translates to: QDSDRPTMRTGF*ISSLESIPPTT
Trigger: TGTGGTTGGAGGAATGGACTCTAAACTGGAGATCAAGAAACCAGTTCTCATTGTGGGTCTGTCACTGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 72 bp ATGCCGTTTGTGAAACAGCTGTTAGCTGTGAGAACCTaGGTGTTACACAGGTTTGTCATCACCATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: MPFVKQLLAVRT*VLHRFVITMPV
Trigger: AACTGGCATGGTGATGACAAACCTGTGTAACACCAAGGTTCTCACAGCTAACAGCTGTTTCACAAACGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTATTCACTATTACACTTaGAATAGATCTGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGIHYYT*NRSGWQ
Trigger: CTGCCACCCAGATCTATTTCAAGTGTAATAGTGAAT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCAGTCCTTGTACGTTTCTaGTACCCTCGTCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSAVLVRF*YPRPQR
Trigger: CCGCTGTGGACGAGGGTATCAGAAACGTACAAGGAC...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACATTGGGATTTTGTCTaGGACGTCATGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQHWDFV*DVMQGI
Trigger: TATGCCCTGCATGACGTCTCAGACAAAATCCCAATG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAACGACTGGGTCATCTaGGGGGACAGCTTGGACGTA +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVNDWVI*GDSLDV
Trigger: TACGTCCAAGCTGTCCCCTCAGATGACCCAGTCGTT...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATCTGGTTCTTCAGGCTaGGGGCTTCATTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSSGSSG*GLHSPT
Trigger: TGTTGGAGAATGAAGCCCTCAGCCTGAAGAACCAGA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTGGGAACAATAAGGTaGCCTCCCAGCGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSLGTIR*PPSELK
Trigger: CTTCAACTCGCTGGGAGGTCACCTTATTGTTCCCAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGGGGTCAAAAGTGTCTaGGAGTCATCCATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLGVKSV*ESSMGG
Trigger: GCCACCCATGGATGACTCTCAGACACTTTTGACCCC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTTGGGGTCTGCGCAGTaGTGCATAGTGAGGACGACT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLGSAQ*CIVRTT
Trigger: AGTCGTCCTCACTATGCATCACTGCGCAGACCCCAA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGGTCGTGTGGTTAAATaGCTTTCTCAAGGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSGRVVK*LSQGGA
Trigger: TGCGCCACCTTGAGAAAGTCATTTAACCACACGACC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCAACAGCATAATGCAATaGTGCAGAGCGACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSNSIMQ*CRATQA
Trigger: GGCCTGAGTCGCTCTGCATCATTGCATTATGCTGTT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATCCCCACCTGCTGAATaGATTGAGTCCTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETSPPAE*IESLCL
Trigger: CAAACACAAGGACTCAATTCATTCAGCAGGTGGGGA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTATGTTGTGTATGAATaGGTTGATGTACTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGYVVYE*VDVLGS
Trigger: TGAGCCCAGTACATCAACTCATTCATACACAACATA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACGACCTTTCTGCAGTTaGACTGTTCCAAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSRPFCS*TVPKGT
Trigger: TGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAACGCCGAGGAGGAGTTTaGAGGTCCCTCTTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKRRGGV*RSLFPN
Trigger: ATTGGGAAAGAGGGACCTTCAAACTCCTCCTCGGCG...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp TTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGAAGCCATCAAACACACATCCATCTaGATGGTACTGTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: FLSLRIRMLLSFWYREAIKHTSI*MVLWGR
Trigger: CCTACCCCACAGTACCATTCAGATGGATGTGTGTTT...GATGGCTTCCCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCCAGAAGCTGAATCCGTaGACCGCGAAGCAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVQKLNP*TAKQSE
Trigger: TTCGGACTGCTTCGCGGTGCACGGATTCAGCTTCTG...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp TTAAAGCAGCACTACATTCATCCTTTGGAACAGCATAGTGGTTTCTCTTCTCATCTGGGTGGCAGGGCTTaGTTTACAGTACAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LKQHYIHPLEQHSGFSSHLGGRA*FTVQVH
Trigger: GTGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAG...ATGAGAAGAGAAACCACTATGCTGTTCCAAAGGATGAATGTAGTGCTGCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCATTTTCTGCACACTCTaGCCTTCACAGAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSIFCTL*PSQKAP
Trigger: GGGTGCCTTCTGTGAAGGGCAGAGTGTGCAGAAAAT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGTGCAGTTCTTGGATTaGAAGACGAGGCCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLVQFLD*KTRPSQ
Trigger: CTGCGACGGCCTCGTCTTGCAATCCAAGAACTGCAC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGTGCAGTTCTTGGATTaGAAGACGAGGCCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKVQFLD*KTRPSQ
Trigger: CTGCGACGGCCTCGTCTTGCAATCCAAGAACTGCAC...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCACAGGATGGATCAGTCTaGCTTGCTAGACTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPQDGSV*LARLWF
Trigger: GAACCAGAGTCTAGCAAGGCAGACTGATCCATCCTG...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGTTGAAGCTGCCAAATaGGGTACAGGATGGATCAGT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQVEAAK*GTGWIS
Trigger: ACTGATCCATCCTGTACCGCATTTGGCAGCTTCAAC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGACAGTAGACTCGGATaGTGTACTCCAGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRDSRLG*CTPARS
Trigger: GCTCCTCGCTGGAGTACAGCATCCGAGTCTACTGTC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACTGCTACAGAGCTTCTaGCGGATAGGGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRLLQSF*RIGRGM
Trigger: CATCCCTCTCCCTATCCGGCAGAAGCTCTGTAGCAG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGCCATGGACAGTGTCTaGATCCCTGTCCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQAMDSV*IPVQFD
Trigger: ATCAAATTGGACAGGGATGCAGACACTGTCCATGGC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAAGACAAGAGCCTTGTTaGTCTTTGCCAGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQRQEPC*SLPGEV
Trigger: CACTTCTCCTGGCAAAGAGCAACAAGGCTCTTGTCT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATTATTAACTCCCTTCTaGATACGTGGATTACAGAGG +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTLLTPF*IRGLQR
Trigger: CCTCTGTAATCCACGTATGCAGAAGGGAGTTAATAA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACCTCTTCAACACGACTaGTGGGGATTTTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQPLQHD*WGFFSD
Trigger: GTCAGAGAAAAATCCCCAGCAGTCGTGTTGAAGAGG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAAAAAGTCATCATCTTaGGCGGCGGAGCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVKKSSS*AAEPVP
Trigger: CGGCACTGGCTCCGCCGCCCAAGATGATGACTTTTT...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACTCAATAAGGAAATGTaGCAGAGGCTCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETLNKEM*QRLRWI
Trigger: GATCCACCTGAGCCTCTGCCACATTTCCTTATTGAG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTCAGAGAGGTCATCTTaGGGGGTGACAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLSERSS*GVTAPE
Trigger: CTCAGGTGCTGTCACCCCCCAAGATGACCTCTCTGA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAATCAGAGAGGTCATCTTaGGGGGTGACAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKSERSS*GVTAPE
Trigger: CTCAGGTGCTGTCACCCCCCAAGATGACCTCTCTGA...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp TCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAATGCCTTGCTAGACTCTaGTTCTTCAGGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SIVQFSSKLDIGKVSAPECLARL*FFRLRA
Trigger: AGCCCTCAGCCTGAAGAACCAGAGTCTAGCAAGGCA...TTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGCTTCGCAGCCGCTTTaGTGGTGGAATGTCCTACCA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRASQPL*WWNVLP
Trigger: TGGTAGGACATTCCACCACCAAAGCGGCTGCGAAGC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATTTCCCCTTCCAGCATaGTGGTTAATACTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETFPLPA*WLILPF
Trigger: GAAGGGCAGTATTAACCACCATGCTGGAAGGGGAAA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATGCATTGGTCTCATCTaGATTTCCTCCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQCIGLI*ISSSAV
Trigger: CACAGCTGAGGAGGAAATCCAGATGAGACCAATGCA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGCCTGTGAAGTGCATTaGTCTCATCTGGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETACEVH*SHLDFL
Trigger: GAGGAAATCCAGATGAGACCAATGCACTTCACAGGC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACATAGGGAGTCGACGTaGGGCCACACAACGGCAATA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRHREST*GHTTAI
Trigger: TATTGCCGTTGTGTGGCCCCACGTCGACTCCCTATG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTTTCCCTTTTCTGGTaGTGGGAAGTTGAACCAAAA +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGFSLFW*WEVEPK
Trigger: TTTTGGTTCAACTTCCCACCACCAGAAAAGGGAAAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGGATCTGGAAGCTCATaGCTAGACTTAGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETGSGSS*LDLVCR
Trigger: TCTGCAGACTAAGTCTAGCCATGAGCTTCCAGATCC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGGCACACATTACATTTaGTTGAATGAGCCCGTTAAT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTGTHYI*LNEPVN
Trigger: ATTAACGGGCTCATTCAACCAAATGTAATGTGTGCC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAAGAGCTGCTAATAATTaGTGGGCTTGCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQRAANN*WACCAS
Trigger: ACTGGCACAGCAAGCCCACCAATTATTAGCAGCTCT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACAGAGATTCCCAACCTaGGATTCCAGAAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETQRFPT*DSRRSL
Trigger: CAGAGATCTTCTGGAATCCCAGGTTGGGAATCTCTG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACAGAGATTCCCAACCTaGGATTCCAGAAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQQRFPT*DSRRSL
Trigger: CAGAGATCTTCTGGAATCCCAGGTTGGGAATCTCTG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAAAAGGGGACAGTAGGTaGATGACACTGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQKGDSR*MTLPLQ
Trigger: TTGAAGAGGCAGTGTCATCCACCTACTGTCCCCTTT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp ATAAGATCGATACAGAATTATCTGGATCGTAACTTCCCCGTGGTCTCAACTTCCATCGTAACTTCCCCGTaGTCTCAACTTCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: IRSIQNYLDRNFPVVSTSIVTSP*SQLPVL
Trigger: AAGGACAGGAAGTTGAGACCACGGGGAAGTTACGAT...GGAAGTTGAGACCACGGGGAAGTTACGATCCAGATAATTCTGTATCGATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGAGAGCAACATCATCTaGATCAGGAGCAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSESNII*IRSSLH
Trigger: ATGCAGACTGCTCCTGATTCAGATGATGTTGCTCTC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCACATTGGGATTTTGTCTaGGACGTCATGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPHWDFV*DVMQGI
Trigger: TATGCCCTGCATGACGTCTCAGACAAAATCCCAATG...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCGGGGGTGACAGCACCTaGGGTGTTGTACACTTTGAT +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVGGDST*GVVHFD
Trigger: ATCAAAGTGTACAACACCTCAGGTGCTGTCACCCCC...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGGGGGTGACAGCACCTaGGGTGTTGTACACTTTGAT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLGGDST*GVVHFD
Trigger: ATCAAAGTGTACAACACCTCAGGTGCTGTCACCCCC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGGAAGTGATGCATGTTaGATTAAACTGATGACCACA +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLGSDAC*IKLMTT
Trigger: TGTGGTCATCAGTTTAATTCAACATGCATCACTTCC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAATGCAGGGGGTGGGCTaGGAGAGATTTTATAGAATA +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQMQGVG*ERFYRI
Trigger: TATTCTATAAAATCTCTCTCAGCCCACCCCCTGCAT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAAGGGTTCTGACAGATaGGTACCTCACACACGAAAT +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETKGSDR*VPHTRN
Trigger: ATTTCGTGTGTGAGGTACTCATCTGTCAGAACCCTT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGCCAGTTATCAATTCTaGATCCAACTTCTATTCCTT +
Preference number: 4 (lower is better)
Translates to: VGKRLSRQQADEELLIIGASYQF*IQLLFL
Trigger: AAGGAATAGAAGTTGGATTCAGAATTGATAACTGGC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGCCAGTTATCAATTCTaGATCCAACTTCTATTCCTT +
Preference number: 4 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTASYQF*IQLLFL
Trigger: AAGGAATAGAAGTTGGATTCAGAATTGATAACTGGC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAGTTTCAGGGTGTCCTaGACTCAGTCCCCACGACTT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLSFRVS*TQSPRL
Trigger: AAGTCGTGGGGACTGAGTTCAGGACACCCTGAAACT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACTTTGCCAGGAGAAGTaGAAAGTCTTGATTCCACCC +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSLCQEK*KVLIPP
Trigger: GGGTGGAATCAAGACTTTTCACTTCTCCTGGCAAAG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCACATTACATTTGGTTaGATGAGCCCGTTAATATCC +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLHITFG*MSPLIS
Trigger: GGATATTAACGGGCTCATTCAACCAAATGTAATGTG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTCTACACACCAGTACTaGGGGTTATTCCACCCCGGA +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLSTHQY*GLFHPG
Trigger: TCCGGGGTGGAATAACCCTCAGTACTGGTGTGTAGA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGAAGCCATCAAGCCATCTTTCAGCTaGAAATCTCCTCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: FLSLRIRMLLSFWYREAIKPSFS*KSPLLL
Trigger: AAGCAGGAGAGGAGATTTTCAGCTGAAAGATGGCTT...GATGGCTTCCCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp TTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGAAGCCATCAAGAGTTCTTCCACTTaGTGGCGCGAAATCTCAATG +
Preference number: 4 (lower is better)
Translates to: FLSLRIRMLLSFWYREAIKSSST*WREISM
Trigger: CATTGAGATTTCGCGCCAGCAAGTGGAAGAACTCTT...GATGGCTTCCCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAAAGAGTTCTTCCACTTaGTGGCGCGAAATCTCAATG +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQKSSST*WREISM
Trigger: CATTGAGATTTCGCGCCAGCAAGTGGAAGAACTCTT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCTCCGTAGATATGCAATaGGCACATACGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVSVDMQ*AHTPSG
Trigger: GCCGGAAGGCGTATGTGCGCATTGCATATCTACGGA...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp ATAAGATCGATACAGAATTATCTGGATCGTAACTTCCCCGTGGTCTCAACTTCCTTTCCTAGGGGTTCCTaGTCAAATGTCTTCCGTAGA +
Preference number: 4 (lower is better)
Translates to: IRSIQNYLDRNFPVVSTSFPRGS*SNVFRR
Trigger: TCTACGGAAGACATTTGAGCAGGAACCCCTAGGAAA...GGAAGTTGAGACCACGGGGAAGTTACGATCCAGATAATTCTGTATCGATCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACAGATCTTGTCTTGCTaGCTTGATGTTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSQILSC*LDVHRL
Trigger: CAGCCTGTGAACATCAAGGCAGCAAGACAAGATCTG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCACAGATCTTGTCTTGCTaGCTTGATGTTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKAQILSC*LDVHRL
Trigger: CAGCCTGTGAACATCAAGGCAGCAAGACAAGATCTG...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACAGCAGATCTTGTCTTaGTGCCTTGATGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSQQILS*CLDVHR
Trigger: CCTGTGAACATCAAGGCAGCAAGACAAGATCTGCTG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCACAGCAGATCTTGTCTTaGTGCCTTGATGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKAQQILS*CLDVHR
Trigger: CCTGTGAACATCAAGGCAGCAAGACAAGATCTGCTG...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCCACTGTCCCTGTGCTaGCTGGTTCTTGAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLPLSLC*LVLEQY
Trigger: ATACTGCTCAAGAACCAGGCAGCACAGGGACAGTGG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACCTTCTCCTTCCACCTaGCGCACACAGAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRPSPST*RTQSLQ
Trigger: TTGCAAACTCTGTGTGCGGCAGGTGGAAGGAGAAGG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTGGCTAGACTTAGTCTaGAGAGAAAACCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSWLDLV*RENPPS
Trigger: ACTGGGTGGGTTTTCTCTGCAGACTAAGTCTAGCCA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATTGGTGGGCTTGCTGTaGCAGTACACTTGCGGAGTA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRLVGLL*QYTCGV
Trigger: TACTCCGCAAGTGTACTGGCACAGCAAGCCCACCAA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCACAAACCAAGGGGACTaGAGGGAAAATCAGGATTGG +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSTNQGD*RENQDW
Trigger: CCAATCCTGATTTTCCCTGCAGTCCCCTTGGTTTGT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp ACACATCCATCTGAATGGTACTGTGGGGTAGGCAATATTTTACTTCCACTCTTTCTCAATAAGGAAATGTaGCAGAGGCTCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: THPSEWYCGVGNILLPLFLNKEM*QRLRWI
Trigger: GATCCACCTGAGCCTCTGCCACATTTCCTTATTGAG...AAAGAGTGGAAGTAAAATATTGCCTACCCCACAGTACCATTCAGATGGATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACAGTGGATCCAGAATTaGAGAGTTGGTCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQQWIQN*RVGHWD
Trigger: ATCCCAATGACCAACTCTCCAATTCTGGATCCACTG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATTTCAGGTTGGGCAGTaGATCCAGAATTGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQFQVGQ*IQNWRV
Trigger: AACTCTCCAATTCTGGATCCACTGCCCAACCTGAAA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATCCAGGTTCAGCTTATaGGCCAGCATCCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRSRFSL*ASILQS
Trigger: TGACTGGAGGATGCTGGCCCATAAGCTGAACCTGGA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTGCATTGGTCTCATCTaGATTTCCTCCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSCIGLI*ISSSAV
Trigger: CACAGCTGAGGAGGAAATCCAGATGAGACCAATGCA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACACTTTTCCCTTTTCTaGTGGTGGGAAGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETHFSLF*WWEVEP
Trigger: TGGTTCAACTTCCCACCACCAGAAAAGGGAAAAGTG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTTGTACACCACTAGATaGCAGCATGCACAAATGATA +
Preference number: 4 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLLYTTR*QHAQMI
Trigger: TATCATTTGTGCATGCTGCCATCTAGTGGTGTACAA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTTGCGGAGTACCTGTTaGTTTGTCCTGCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLRSTC*FVLLMP
Trigger: GGGCATCAGCAGGACAAACCAACAGGTACTCCGCAA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCATTCCAGAAGATCTCTaGACAGGTCCCTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSIPEDL*TGPFSR
Trigger: CCTACTGAAGGGACCTGTCCAGAGATCTTCTGGAAT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAACTTTTTCTTGTCCATaGCCTGGAGGAGTAGACATC +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQTFSCP*PGGVDI
Trigger: GATGTCTACTCCTCCAGGCCATGGACAAGAAAAAGT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCATCTGGTTCTTCAGGCTaGGGGCTTCATTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSASGSSG*GLHSPT
Trigger: TGTTGGAGAATGAAGCCCTCAGCCTGAAGAACCAGA...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCTTGGGAACAATAAGGTaGCCTCCCAGCGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVLGTIR*PPSELK
Trigger: CTTCAACTCGCTGGGAGGTCACCTTATTGTTCCCAA...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATTGGGAACAATAAGGTaGCCTCCCAGCGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRLGTIR*PPSELK
Trigger: CTTCAACTCGCTGGGAGGTCACCTTATTGTTCCCAA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCCGGGAATCAGCAAGCTaGCTCCTGAATTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVRESAS*LLNWEQ
Trigger: TTGTTCCCAATTCAGGAGTCAGCTTGCTGATTCCCG...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGTACTGGGCTCACAGTaGCCTAATATTGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSVLGSQ*PNIEMS
Trigger: ACTCATCTCAATATTAGGTCACTGTGAGCCCAGTAC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGTACTGGGCTCACAGTaGCCTAATATTGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSVLGSQ*PNIEMS
Trigger: ACTCATCTCAATATTAGGTCACTGTGAGCCCAGTAC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGCCTTGGGCTTACACTaGGTTCTCCACATGAAACTG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRALGLH*VLHMKL
Trigger: CAGTTTCATGTGGAGAACTCAGTGTAAGCCCAAGGC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAATGAATACAATGAGGTaGCAGGAAAACCTAGGAACC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETMNTMR*QENLGT
Trigger: GGTTCCTAGGTTTTCCTGTCACCTCATTGTATTCAT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGGAGGAGTAGACATCTaGGTTTTTACCCCTACATGT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSGGVDI*VFTPTC
Trigger: ACATGTAGGGGTAAAAACTCAGATGTCTACTCCTCC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAACACATATAACACCATaGCATCACACACACACAGTG +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETTHITP*HHTHTV
Trigger: CACTGTGTGTGTGTGATGTCATGGTGTTATATGTGT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTTCCTAGGGGTTCCTaGTCAAATGTCTTCCGTAGA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSFPRGS*SNVFRR
Trigger: TCTACGGAAGACATTTGAGCAGGAACCCCTAGGAAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCATTTCCTAGGGGTTCCTaGTCAAATGTCTTCCGTAGA +
Preference number: 4 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPFPRGS*SNVFRR
Trigger: TCTACGGAAGACATTTGAGCAGGAACCCCTAGGAAA...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTTTCCTAGGGGTTCCTaGTCAAATGTCTTCCGTAGA +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSFPRGS*SNVFRR
Trigger: TCTACGGAAGACATTTGAGCAGGAACCCCTAGGAAA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAATTTTCTGCACACTCTaGCCTTCACAGAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKIFCTL*PSQKAP
Trigger: GGGTGCCTTCTGTGAAGGGCAGAGTGTGCAGAAAAT...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACAGGCAAACGATCACTaGTATCACAATCCCAACATA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETQANDH*YHNPNI
Trigger: TATGTTGGGATTGTGATAGCAGTGATCGTTTGCCTG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAAAGCCCCCATTGAGTaGCGAAGAGTCAATAATATC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETKAPIE*RRVNNI
Trigger: GATATTATTGACTCTTCGGCACTCAATGGGGGCTTT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSIWEVL*FPKIQD
Trigger: ATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGAT...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSIWEVL*FPKIQD
Trigger: ATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGAT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTTTCCTTCTGGCTCCTaGTGCAGTCTTGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLFPSGS*CSLACE
Trigger: TTCACAGGCAAGACTGCAGCAGGAGCCAGAAGGAAA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAATCACTGTCTTCCCTaGAGTGCTACAGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETNHCLP*SATALF
Trigger: GAATAAAGCTGTAGCACTGCAGGGAAGACAGTGATT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACTGTGCCAGTACACTTaGGGAGTACCTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRLCQYT*GVPVGL
Trigger: CAAACCAACAGGTACTCCGCAAGTGTACTGGCACAG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATCAGGTGGTCGACACTaGAGTAAGACTTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRSGGRH*SKTSCS
Trigger: GGAACAGGAAGTCTTACTCCAGTGTCGACCACCTGA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTATTTTAATAAGATCGATACAGAATTATCTGGATCGTAACTTCCCCGTGGTCTCAGGTGGTCGACACTaGAGTAAGACTTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VILIRSIQNYLDRNFPVVSGGRH*SKTSCS
Trigger: GGAACAGGAAGTCTTACTCCAGTGTCGACCACCTGA...GACCACGGGGAAGTTACGATCCAGATAATTCTGTATCGATCTTATTAAAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCTCAGGTGGTCGACACTaGAGTAAGACTTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVSGGRH*SKTSCS
Trigger: GGAACAGGAAGTCTTACTCCAGTGTCGACCACCTGA...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCCATCAGTGCAGTTCTTaGATTGCAAGACGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVHQCSS*IARRGR
Trigger: ACGGCCTCGTCTTGCAATCCAAGAACTGCACTGATG...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACAGGATTACGCCAGTTaGGCTGGATTTGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRQDYAS*AGFGGK
Trigger: TTTGCCACCAAATCCAGCCCAACTGGCGTAATCCTG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCCCAAAGAGTAATAGTTaGTCCTATGAGGCACTCGAG +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSPKSNS*SYEALE
Trigger: CTCGAGTGCCTCATAGGACCAACTATTACTCTTTGG...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACTTCAACACGACTGCTaGGGATTTTTCTCTGACAAA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETLQHDC*GFFSDK
Trigger: TTTGTCAGAGAAAAATCCCCAGCAGTCGTGTTGAAG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 72 bp TTCATACACATGTCTGCTTGTTCTTCAGTTTTGGTTTaGCTACTGGGCTTTGATTCTTTAATCCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: FIHMSACSSVLV*LLGFDSLIPTC
Trigger: GCAGGTGGGGATTAAAGAATCAAAGCCCAGTAGCAAAACCAAAACTGAAGAACAAGCAGACATGTGTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
3UTR CAA 72 bp TGGAAGCACATGTATAATTCAAGTCTGTTCAGCAACTaGTGTGCCTCCAGCCTAAAAGTAAACCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: WKHMYNSSLFSN*CASSLKVNHSH
Trigger: ATGACTGTGGTTTACTTTTAGGCTGGAGGCACACAAGTTGCTGAACAGACTTGAATTATACATGTGCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGTTTCTGGGAGTTCATaGAAAAAGTCATCATCTTGG +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETVSGSS*KKSSSW
Trigger: CCAAGATGATGACTTTTTTCATGAACTCCCAGAAAC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453304.6
CDS-3UTR TCA 90 bp GGTCTCAACTTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGTTTCTGGGAGTTCATaGAAAAAGTCATCATCTTGG +
Preference number: 4 (lower is better)
Translates to: GLNFLSLRIRMLLSFWYRVSGSS*KKSSSW
Trigger: CCAAGATGATGACTTTTTTCATGAACTCCCAGAAAC...CCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAAGTTGAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAATTCACTATTACACTTaGAATAGATCTGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETIHYYT*NRSGWQ
Trigger: CTGCCACCCAGATCTATTTCAAGTGTAATAGTGAAT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGAGAGCAACATCATCTaGATCAGGAGCAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRESNII*IRSSLH
Trigger: ATGCAGACTGCTCCTGATTCAGATGATGTTGCTCTC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGACTCAAAGTCACGATaGTTCTTCCGATACACAAAC +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSDSKSR*FFRYTN
Trigger: GTTTGTGTATCGGAAGAATCATCGTGACTTTGAGTC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGACTCAAAGTCACGATaGTTCTTCCGATACACAAAC +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSDSKSR*FFRYTN
Trigger: GTTTGTGTATCGGAAGAATCATCGTGACTTTGAGTC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAGGTGTTGTACACTTTaGTTTTCAGGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SIVQFSSKLDIGKVSAPERCCTL*FSGWAV
Trigger: CACTGCCCAACCTGAAAATCAAAGTGTACAACACCT...TTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGTGCTGCCTTTAAAATaGAGAGCCTTAGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSVLPLK*RALGSS
Trigger: AGAAGAACCTAAGGCTCTTCATTTTAAAGGCAGCAC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGGAAGTGATGCATGTTaGATTAAACTGATGACCACA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETGSDAC*IKLMTT
Trigger: TGTGGTCATCAGTTTAATTCAACATGCATCACTTCC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATTGTTAAAGAGCTTGTaGTGGTCCCAAGGAAACATA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETLLKSL*WSQGNI
Trigger: TATGTTTCCTTGGGACCATCACAAGCTCTTTAACAA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCCACAACCCTGGTACTaGTGCGTAATCTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLPQPWY*CVILTS
Trigger: ACTTGTCAAGATTACGCATCAGTACCAGGGTTGTGG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATGGCTTCCTATGAAATaGACTGTTATATCTGGACCT +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETWLPMK*TVISGP
Trigger: AGGTCCAGATATAACAGTTCATTTCATAGGAAGCCA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACACATTACATTTGGTTaGATGAGCCCGTTAATATCC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETHITFG*MSPLIS
Trigger: GGATATTAACGGGCTCATTCAACCAAATGTAATGTG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGAAGCCATCTTTCAGCTGAAGGACCATAGACTATaGCAGTGGCAGTTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LRIRMLLSFWYREAIFQLKDHRL*QWQLYF
Trigger: AAAGTACAACTGCCACTGTCATAGTCTATGGTCCTT...CAGCTGAAAGATGGCTTCCCTATACCAGAAGGAAAGTAACATTCTTATCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp TCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAGAGTTCTTCCACTTaGTGGCGCGAAATCTCAATG +
Preference number: 4 (lower is better)
Translates to: SIVQFSSKLDIGKVSAPEKSSST*WREISM
Trigger: CATTGAGATTTCGCGCCAGCAAGTGGAAGAACTCTT...TTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp CAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATATAACACAGGTGTAATTTaGAGTATCAGAGAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: QFSSKLDIGKVSAPEKAYNTGVI*SIRESG
Trigger: GCCCGACTCTCTGATACTGCAAATTACACCTGTGTT...ATATGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGTTGAAGCTGCCAAATaGGGTACAGGATGGATCAGT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRVEAAK*GTGWIS
Trigger: ACTGATCCATCCTGTACCGCATTTGGCAGCTTCAAC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCGTTGAAGCTGCCAAATaGGGTACAGGATGGATCAGT +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVVEAAK*GTGWIS
Trigger: ACTGATCCATCCTGTACCGCATTTGGCAGCTTCAAC...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGCCATGGACAGTGTCTaGATCCCTGTCCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRAMDSV*IPVQFD
Trigger: ATCAAATTGGACAGGGATGCAGACACTGTCCATGGC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAAGGATGGGGGTTTTCTaGATAGCAGAGGTGACTGTT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRRMGVF*IAEVTV
Trigger: AACAGTCACCTCTGCTATGCAGAAAACCCCCATCCT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAAGACAAGAGCCTTGTTaGTCTTTGCCAGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRRQEPC*SLPGEV
Trigger: CACTTCTCCTGGCAAAGAGCAACAAGGCTCTTGTCT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGGAAGGTCACCAACTTaGTTCAGCTCAACATTAAAC +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSGRSPT*FSSTLN
Trigger: GTTTAATGTTGAGCTGAAGCAAGTTGGTGACCTTCC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTTCTTCCACTTGCTaGCGCGAAATCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVSSSTC*REISML
Trigger: GAGCATTGAGATTTCGCGCCAGCAAGTGGAAGAACT...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAGTTCTTCCACTTGCTaGCGCGAAATCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLSSSTC*REISML
Trigger: GAGCATTGAGATTTCGCGCCAGCAAGTGGAAGAACT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATATCAGTGGATCCAGAATTaGAGAGTTGGTCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: QFSSKLDIGKVSAPEKAYQWIQN*RVGHWD
Trigger: ATCCCAATGACCAACTCTCCAATTCTGGATCCACTG...ATATGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAATCACCTTTCTGGGGTaGAATAAGGGAAAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETITFLG*NKGKVK
Trigger: TTTTACCTTTCCCTTATTCCACCCCAGAAAGGTGAT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATATCAATCACCTTTCTaGGGTGGAATAAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSYQSPF*GGIRER
Trigger: CCTTTCCCTTATTCCACCCCAGAAAGGTGATTGATA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACTGGAGGCATCACGGTaGAAGTTGAGCATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRLEASR*KLSISE
Trigger: TTCTGAAATGCTCAACTTCCACCGTGATGCCTCCAG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACACTTGTTCTTCAGTTTTaGTTTTGCTACTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETLVLQF*FCYWAL
Trigger: CAAAGCCCAGTAGCAAAACCAAAACTGAAGAACAAG...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCATAGGAGCGGAAACATaGAAAGATGGAAGCACATGT +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSIGAET*KDGSTC
Trigger: ACATGTGCTTCCATCTTTCCATGTTTCCGCTCCTAT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATTTTCCCTTTTCTGGTaGTGGGAAGTTGAACCAAAA +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETFSLFW*WEVEPK
Trigger: TTTTGGTTCAACTTCCCACCACCAGAAAAGGGAAAA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGCTGCTAATAATTGGTaGGCTTGCTGTGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLAANNW*ACCAST
Trigger: TGTACTGGCACAGCAAGCCCACCAATTATTAGCAGC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAGAGCTGCTAATAATTaGTGGGCTTGCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLRAANN*WACCAS
Trigger: ACTGGCACAGCAAGCCCACCAATTATTAGCAGCTCT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATTCTTGTCCATGGCCTaGAGGAGTAGACATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRFLSMA*RSRHLS
Trigger: ACTCAGATGTCTACTCCTCCAGGCCATGGACAAGAA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGATGTTCCCTGCAACTaGGCTCGATGCATTATGTCT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRDVPCN*ARCIMS
Trigger: AGACATAATGCATCGAGCCCAGTTGCAGGGAACATC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAGGTGTTGTACACTTTaGTTTTCAGGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLRCCTL*FSGWAV
Trigger: CACTGCCCAACCTGAAAATCAAAGTGTACAACACCT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATTTGCTACTGGGCTTTaGTTCTTTAATCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRFATGL*FFNPHL
Trigger: CAGGTGGGGATTAAAGAATCAAAGCCCAGTAGCAAA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAAAAAGCATCTGAAGTaGACCCCAAGGGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLKKHLK*TPRVLS
Trigger: ACTGAGAACCCTTGGGGTTCACTTCAGATGCTTTTT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATGGCTTCCTATGAAATaGACTGTTATATCTGGACCT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSWLPMK*TVISGP
Trigger: AGGTCCAGATATAACAGTTCATTTCATAGGAAGCCA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCCTGCTTTCTTCCCTTTaGTTAACAACCCCAATTTTC +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSLLSSL*LTTPIF
Trigger: GAAAATTGGGGTTGTTAATCAAAGGGAAGAAAGCAG...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAAGAAGTGAAAAGTCTTaGTTCCACCCTCAAAACGTT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSRSEKS*FHPQNV
Trigger: AACGTTTTGAGGGTGGAATCAAGACTTTTCACTTCT...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAAAGACTCATTCAACTTaGAGGCTTGAAAACCCAACA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSKTHST*RLENPT
Trigger: TGTTGGGTTTTCAAGCCTTCAAGTTGAATGAGTCTT...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATATCAACCATTATCTTaGGCAATGATGTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETYQPLS*AMMYCF
Trigger: GAAGCAGTACATCATTGCTCAAGATAATGGTTGATA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGGAGGAGTAGACATCTaGGTTTTTACCCCTACATGT +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLGGVDI*VFTPTC
Trigger: ACATGTAGGGGTAAAAACTCAGATGTCTACTCCTCC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAAGAGTTCTTCCACTTaGTGGCGCGAAATCTCAATG +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLKSSST*WREISM
Trigger: CATTGAGATTTCGCGCCAGCAAGTGGAAGAACTCTT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAACACAGGTGTAATTTaGAGTATCAGAGAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLNTGVI*SIRESG
Trigger: GCCCGACTCTCTGATACTGCAAATTACACCTGTGTT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GTTATTTTAATAAGATCGATACAGAATTATCTGGATCGTAACTTCCCCGTGGTCAACACAGGTGTAATTTaGAGTATCAGAGAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: VILIRSIQNYLDRNFPVVNTGVI*SIRESG
Trigger: GCCCGACTCTCTGATACTGCAAATTACACCTGTGTT...GACCACGGGGAAGTTACGATCCAGATAATTCTGTATCGATCTTATTAAAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACTGTCTTCCCTGCAGTaGTACAGCTTTATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRLSSLQ*YSFIPK
Trigger: TTTGGGAATAAAGCTGTAGCACTGCAGGGAAGACAG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTTATTAACTCCCTTCTaGATACGTGGATTACAGAGG +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSLLTPF*IRGLQR
Trigger: CCTCTGTAATCCACGTATGCAGAAGGGAGTTAATAA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTCCACTGTTCTGACTaGTGTACTTTTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSFHCSD*CTFSCP
Trigger: TGGACAAGAAAAAGTACAGCAGTCAGAACAGTGGAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTTCCACTGTTCTGACTaGTGTACTTTTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSFHCSD*CTFSCP
Trigger: TGGACAAGAAAAAGTACAGCAGTCAGAACAGTGGAA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCATTTCAGGTTGGGCAGTaGATCCAGAATTGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSAFQVGQ*IQNWRV
Trigger: AACTCTCCAATTCTGGATCCACTGCCCAACCTGAAA...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACACTTTTCCCTTTTCTaGTGGTGGGAAGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRHFSLF*WWEVEP
Trigger: TGGTTCAACTTCCCACCACCAGAAAAGGGAAAAGTG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAATGTATCACATAGAATaGTTGATGAAGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQMYHIE*LMKWLP
Trigger: AGGAAGCCACTTCATCAACCATTCTATGTGATACAT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACCAAAGAGTAATAGTTaGTCCTATGAGGCACTCGAG +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRPKSNS*SYEALE
Trigger: CTCGAGTGCCTCATAGGACCAACTATTACTCTTTGG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGGCACACATTACATTTaGTTGAATGAGCCCGTTAAT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSGTHYI*LNEPVN
Trigger: ATTAACGGGCTCATTCAACCAAATGTAATGTGTGCC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAGGTATGTTAAAAGGCTaGCATTCAGTAGCAAATACT +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQGMLKG*HSVANT
Trigger: AGTATTTGCTACTGAATGCCAGCCTTTTAACATACC...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAAGTCCAGTAGACCTTTaGAACTTAAAAATGACACAC +
Preference number: 4 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQSPVDL*NLKMTH
Trigger: GTGTGTCATTTTTAAGTTCCAAAGGTCTACTGGACT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTACTTTTTCTTGTCCATaGCCTGGAGGAGTAGACATC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLTFSCP*PGGVDI
Trigger: GATGTCTACTCCTCCAGGCCATGGACAAGAAAAAGT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp TTAAAGCAGCACTACATTCATCCTTTGGAACAGCATAGTGGTTTCTCTTCTCATATTCACTATTACACTTaGAATAGATCTGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LKQHYIHPLEQHSGFSSHIHYYT*NRSGWQ
Trigger: CTGCCACCCAGATCTATTTCAAGTGTAATAGTGAAT...ATGAGAAGAGAAACCACTATGCTGTTCCAAAGGATGAATGTAGTGCTGCTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR TCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGACTCAAAGTCACGATaGTTCTTCCGATACACAAAC +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKDSKSR*FFRYTN
Trigger: GTTTGTGTATCGGAAGAATCATCGTGACTTTGAGTC...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTGTCATAAAGGTCCTTaGACTCTACAGGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSCHKGP*TLQVFI
Trigger: AATGAAAACCTGTAGAGTTCAAGGACCTTTATGACA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATATCAACCATTATCTTaGGCAATGATGTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSYQPLS*AMMYCF
Trigger: GAAGCAGTACATCATTGCTCAAGATAATGGTTGATA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTATGAATACAATGAGGTaGCAGGAAAACCTAGGAACC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLMNTMR*QENLGT
Trigger: GGTTCCTAGGTTTTCCTGTCACCTCATTGTATTCAT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCGAGAGCAACATCATCTaGATCAGGAGCAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVESNII*IRSRRK
Trigger: TTTTCTTCTGCTCCTGATTCAGATGATGTTGCTCTC...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCCAGGCAAACGATCACTaGTATCACAATCCCAACATA +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVQANDH*YHNPNI
Trigger: TATGTTGGGATTGTGATAGCAGTGATCGTTTGCCTG...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACAGGCAAACGATCACTaGTATCACAATCCCAACATA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRQANDH*YHNPNI
Trigger: TATGTTGGGATTGTGATAGCAGTGATCGTTTGCCTG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR GCA 90 bp GGGTTTATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAAAGCCCCCATTGAGTaGCGAAGAGTCAATAATATC +
Preference number: 4 (lower is better)
Translates to: GFIVSIVQFSSKLDIGKVKAPIE*RRVNNI
Trigger: GATATTATTGACTCTTCGGCACTCAATGGGGGCTTT...GACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAATAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACCCTACATGTACAGATaGCATTTGTTACTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRPYMYR*HLLLSG
Trigger: TCCCGAAAGTAACAAATGGCATCTGTACATGTAGGG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAAAGTGGGCATGTACATaGGCAGTTGTATCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRKWACT*AVVSVF
Trigger: GAAAACAGATACAACTGCCCATGTACATGCCCACTT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCATGTATCACATAGAATaGTTGATGAAGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSMYHIE*LMKWLP
Trigger: AGGAAGCCACTTCATCAACCATTCTATGTGATACAT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGGTATGTTAAAAGGCTaGCATTCAGTAGCAAATACT +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSGMLKG*HSVANT
Trigger: AGTATTTGCTACTGAATGCCAGCCTTTTAACATACC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp ACACATCCATCTGAATGGTACTGTGGGGTAGGCAATATTTTACTTCCACTCTTTAACACAGCCATTATCTaGACTAGGAAATTAAACCTC +
Preference number: 4 (lower is better)
Translates to: THPSEWYCGVGNILLPLFNTAII*TRKLNL
Trigger: GAGGTTTAATTTCCTAGTCCAGATAATGGCTGTGTT...AAAGAGTGGAAGTAAAATATTGCCTACCCCACAGTACCATTCAGATGGATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR TCA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCAGTTTCTGGGAGTTCATaGAAAAAGTCATCATCTTGG +
Preference number: 4 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSAVSGSS*KKSSSW
Trigger: CCAAGATGATGACTTTTTTCATGAACTCCCAGAAAC...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCAATTCACTATTACACTTaGAATAGATCTGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSAIHYYT*NRSGWQ
Trigger: CTGCCACCCAGATCTATTTCAAGTGTAATAGTGAAT...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAAGAAGTGAAAAGTCTTaGTTCCACCCTCAAAACGTT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRRSEKS*FHPQNV
Trigger: AACGTTTTGAGGGTGGAATCAAGACTTTTCACTTCT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAGGAAATCTTCCAAAGTaGTCATTACAGCCAGAGATT +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRGNLPK*SLQPEI
Trigger: AATCTCTGGCTGTAATGATCACTTTGGAAGATTTCC...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR TCA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAATTGAAATGGGATAAATaGAACTCTGCATGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKLKWDK*NSACKA
Trigger: GGCTTTGCATGCAGAGTTTCATTTATCCCATTTCAA...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR GCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCTGATCAGCAAAACCTaGCTACAATTCATCTTCTAC +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLISKT*LQFIFY
Trigger: GTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCTTGTTCTTCAGTTTTaGTTTTGCTACTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLVLQF*FCYWAL
Trigger: CAAAGCCCAGTAGCAAAACCAAAACTGAAGAACAAG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTTGTACACCACTAGATaGCAGCATGCACAAATGATA +
Preference number: 4 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLYTTR*QHAQMI
Trigger: TATCATTTGTGCATGCTGCCATCTAGTGGTGTACAA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTCTCTGACAAACATTaGTGTCTTCTTTACAAAGAG +
Preference number: 4 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSFSDKH*CLLYKE
Trigger: CTCTTTGTAAAGAAGACACCAATGTTTGTCAGAGAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CCA 90 bp TTAAAGCAGCACTACATTCATCCTTTGGAACAGCATAGTGGTTTCTCTTCTCATATGTTACTTTCCTTCTaGTATAGGGAAGCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LKQHYIHPLEQHSGFSSHMLLSF*YREAIF
Trigger: AAAGATGGCTTCCCTATACCAGAAGGAAAGTAACAT...ATGAGAAGAGAAACCACTATGCTGTTCCAAAGGATGAATGTAGTGCTGCTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CCA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAAGGACAAATCTGAAATaGTATGTTAAAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GPSKFESNLTAITLLQRRRTNLK*YVKRLA
Trigger: TGCCAGCCTTTTAACATACCATTTCAGATTTGTCCT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS GCA 90 bp CTTTCCCAATGCCTTCTAACTGACGTCTCCCGCGAGCGACTGCTCTaGCCCCACTTGGGAAGTCCAGGGAGGCGCAAGGCGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LSQCLLTDVSRERLL*PHLGSPGRRKAATS
Trigger: GGAGGTGGCCGCCTTGCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCAGTCGCTCGCGGGAGACGTCAGTTAGAAGGCATTGGGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS GCA 90 bp CATCAGTGCAGTTCTTGGATTGCAAGACGAGGCCGTCGCAGTCCTTaGCTCCATTCTTGGGGGCTGGCGCCGTGCACTCCCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: HQCSSWIARRGRRSP*LHSWGLAPCTPSCA
Trigger: GGCGCAGGAGGGAGTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCCTCGTCTTGCAATCCAAGAACTGCACTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS TCA 90 bp TGTACTCCAGCGAGGAGCAGCACAGGGGCCCAAAGATGGCCAGCTTaGGGCGCTTCGCAGCCGCTTTGGTGGTGGAATGTCCTACCAGGG +
Preference number: 5 (lower is better)
Translates to: CTPARSSTGAQRWPA*GASQPLWWWNVLPG
Trigger: CCCTGGTAGGACATTCCACCACCAAAGCGGCTGCGAAGCGCCTCAAGCTGGCCATCTTTGGGCCCCTGTGCTGCTCCTCGCTGGAGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453304.6
ENST00000513796.5
ENST00000610318.4
CDS GCA 90 bp GGAGAGGAGACGCCGAGGAGGAGTTTGAAGGTCCCTCTTTCCCAATaGCTTCTAACTGACGTCTCCCGCGAGCGACTGCTCTGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: GEETPRRSLKVPLSQ*LLTDVSRERLLCPH
Trigger: GTGGGGGCAGAGCAGTCGCTCGCGGGAGACGTCAGTTAGAAGGCATTGGGAAAGAGGGACCTTCAAACTCCTCCTCGGCGTCTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS TCA 90 bp GCCGAGGAGGAGTTTGAAGGTCCCTCTTTCCCAATGCCTTCTAACTaGCGTCTCCCGCGAGCGACTGCTCTGCCCCCACTTGGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: AEEEFEGPSFPMPSN*RLPRATALPPLGKS
Trigger: GGACTTCCCAAGTGGGGGCAGAGCAGTCGCTCGCGGGAGACGTCAGTTAGAAGGCATTGGGAAAGAGGGACCTTCAAACTCCTCCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS CCA 90 bp AGGTTCAGCTTATGGGCCAGCATCCTCCAGTCATGGCCTCTCGTCTaGGGGGCATCCAGGCTGCTACAGAGCTTCTGCCGGATAGGGAGA +
Preference number: 5 (lower is better)
Translates to: RFSLWASILQSWPLV*GASRLLQSFCRIGR
Trigger: TCTCCCTATCCGGCAGAAGCTCTGTAGCAGCCTGGATGCCCCCCAGACGAGAGGCCATGACTGGAGGATGCTGGCCCATAAGCTGAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAGGCCGTCGCAGTCCTaGCCTCCATTCTTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCARPSQS*PPFLGA
Trigger: AGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCCT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACGCTTCGCAGCCGCTTaGGTGGTGGAATGTCCTACC +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCARFAAA*VVECPT
Trigger: GGTAGGACATTCCACCACCAAAGCGGCTGCGAAGCG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS GCA 90 bp TTTCCTTCAGGGCATCCTGGGTGTCATCCAGACAGTAGACTCGGATaGTGTACTCCAGCGAGGAGCAGCACAGGGGCCCAAAGATGGCCA +
Preference number: 5 (lower is better)
Translates to: FPSGHPGCHPDSRLG*CTPARSSTGAQRWP
Trigger: TGGCCATCTTTGGGCCCCTGTGCTGCTCCTCGCTGGAGTACAGCATCCGAGTCTACTGTCTGGATGACACCCAGGATGCCCTGAAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453304.6
ENST00000513796.5
ENST00000610318.4
CDS GCA 90 bp GACGCGCAAACAGCTGAAAGCCCCACTGGGCAGAAGCTGAATCCGTaGACCGCGAAGCAGTCCGAAGAAATAACGACAACCAAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: DAQTAESPTGQKLNP*TAKQSEEITTTKRH
Trigger: GTGGCGCTTGGTTGTCGTTATTTCTTCGGACTGCTTCGCGGTGCACGGATTCAGCTTCTGCCCAGTGGGGCTTTCAGCTGTTTGCGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGCTCCTGCTGCAGTCTaGCCTGTGAAGTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAAPAAV*PVKCIG
Trigger: ACCAATGCACTTCACAGGCAAGACTGCAGCAGGAGC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS GCA 90 bp GTCCACCTGCCATCCACTGGGCATAACGTAGTACAGGCTATTTTCTaGACACTCTGCCCTTCACAGAAGGCACCCCCATTGAGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: VHLPSTGHNVVQAIF*TLCPSQKAPPLSGA
Trigger: GGCACCACTCAATGGGGGTGCCTTCTGTGAAGGGCAGAGTGTGCAGAAAATAGCCTGTACTACGTTATGCCCAGTGGATGGCAGGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 90 bp ATGCCAGTAGGTTCCTCTGACACGGTGCAGTTGAGCTGGAAGATCTaGCCTTCTCCTTCCACCTGCCGCACACAGAGTTTGCAAACCAGC +
Preference number: 5 (lower is better)
Translates to: MPVGSSDTVQLSWKI*PSPSTCRTQSLQTS
Trigger: GCTGGTTTGCAAACTCTGTGTGCGGCAGGTGGAAGGAGAAGGGCAGATCTTCCAGCTCAACTGCACCGTGTCAGAGGAACCTACTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCATCTGGGTGGCAGGGCTaGCTTTACAGTACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCASGWQG*LYSTGS
Trigger: TGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAGA...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAATTGACAGGCGCAGGTaGTGGGTGCTGCCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSIDRRR*WVLPLK
Trigger: TTTTAAAGGCAGCACCCACAACCTGCGCCTGTCAAT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGCTGTGCCAGTACACTaGCGGAGTACCTGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAAVPVH*RSTCWF
Trigger: AAACCAACAGGTACTCCGCAAGTGTACTGGCACAGC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS GCA 90 bp TTTCTGCACACTCTGCCCTTCACAGAAGGCACCCCCATTGAGTGGTaGCGGGTTGGTACAAGTCCTTGTACGTTTCTGATACCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: FLHTLPFTEGTPIEW*RVGTSPCTFLIPSS
Trigger: GGACGAGGGTATCAGAAACGTACAAGGACTTGTACCAACCCGGCACCACTCAATGGGGGTGCCTTCTGTGAAGGGCAGAGTGTGCAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 90 bp CCCAGCGAGTTGAAGCTGCCAAATGCGGTACAGGATGGATCAGTCTaGCTTGCTAGACTCTGGTTCTTCAGGCTGAGGGCTTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: PSELKLPNAVQDGSV*LARLWFFRLRASFS
Trigger: GGAGAATGAAGCCCTCAGCCTGAAGAACCAGAGTCTAGCAAGGCAGACTGATCCATCCTGTACCGCATTTGGCAGCTTCAACTCGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCCAAAGATGGCCAGCTaGAGGCGCTTCGCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: VGKRLSRQQADEELLIIGPKMAS*RRFAAA
Trigger: AGCGGCTGCGAAGCGCCTCAAGCTGGCCATCTTTGG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS TCA 90 bp TTCTTCAGGCTGAGGGCTTCATTCTCCAACAACGACTGGGTCATCTaGGGGGACAGCTTGGACGTAAACTCAGAGAGGTCATCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: FFRLRASFSNNDWVI*GDSLDVNSERSSWG
Trigger: CCCCCAAGATGACCTCTCTGAGTTTACGTCCAAGCTGTCCCCTCAGATGACCCAGTCGTTGTTGGAGAATGAAGCCCTCAGCCTGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 90 bp CAACATCATCTGAATCAGGAGCAGTCTGCATGCAAAGCCCATCAGTaGAGTTCTTGGATTGCAAGACGAGGCCGTCGCAGTCCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: QHHLNQEQSACKAHQ*SSWIARRGRRSPCL
Trigger: GAGGCAAGGACTGCGACGGCCTCGTCTTGCAATCCAAGAACTGCACTGATGGGCTTTGCATGCAGACTGCTCCTGATTCAGATGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS CCA 90 bp CTGCCAAATGCGGTACAGGATGGATCAGTCTGCCTTGCTAGACTCTaGTTCTTCAGGCTGAGGGCTTCATTCTCCAACAACGACTGGGTC +
Preference number: 5 (lower is better)
Translates to: LPNAVQDGSVCLARL*FFRLRASFSNNDWV
Trigger: GACCCAGTCGTTGTTGGAGAATGAAGCCCTCAGCCTGAAGAACCAGAGTCTAGCAAGGCAGACTGATCCATCCTGTACCGCATTTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAAAAGAGTTCTTCCACTaGCTGGCGCGAAATCTCAAT +
Preference number: 5 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSKEFFH*LARNLN
Trigger: ATTGAGATTTCGCGCCAGCAAGTGGAAGAACTCTTT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCACAACACAGGTGTAATTaGCAGTATCAGAGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAQHRCN*QYQRVG
Trigger: CCCGACTCTCTGATACTGCAAATTACACCTGTGTTG...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAATGGATCAGTCTGCCTaGCTAGACTCTGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAMDQSA*LDSGSS
Trigger: TGAAGAACCAGAGTCTAGCAAGGCAGACTGATCCAT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGAGGTGACTGTTCATTaGGAAGATGCCGTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSEVTVH*EDAVCE
Trigger: TTCACAAACGGCATCTTCCAAATGAACAGTCACCTC...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS TCA 90 bp TACAGGATGGATCAGTCTGCCTTGCTAGACTCTGGTTCTTCAGGCTaGGGGCTTCATTCTCCAACAACGACTGGGTCATCTGAGGGGACA +
Preference number: 5 (lower is better)
Translates to: YRMDQSALLDSGSSG*GLHSPTTTGSSEGT
Trigger: TGTCCCCTCAGATGACCCAGTCGTTGTTGGAGAATGAAGCCCTCAGCCTGAAGAACCAGAGTCTAGCAAGGCAGACTGATCCATCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS CCA 90 bp AACCATTCCACCTCAGCCACTGGGATCCCTTCAGGTGGTCGACACTaGAGTAAGACTTCCTGTTCCAAAGACACTTCCTTTCCTAGGGGT +
Preference number: 5 (lower is better)
Translates to: NHSTSATGIPSGGRH*SKTSCSKDTSFPRG
Trigger: ACCCCTAGGAAAGGAAGTGTCTTTGGAACAGGAAGTCTTACTCCAGTGTCGACCACCTGAAGGGATCCCAGTGGCTGAGGTGGAATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGCGCTTCGCAGCCGCTTaGGTGGTGGAATGTCCTACC +
Preference number: 5 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLRFAAA*VVECPT
Trigger: GGTAGGACATTCCACCACCAAAGCGGCTGCGAAGCG...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATGCTTGTTTGTGGGGTaGAACATGAATCACTGTCTT +
Preference number: 5 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSCLFVG*NMNHCL
Trigger: AAGACAGTGATTCATGTTCAACCCCACAAACAAGCA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAAAAGTTGTCCAGTTCTaGAAGAGCCTAACTTGCTCA +
Preference number: 5 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSKVVQF*KSLTCS
Trigger: TGAGCAAGTTAGGCTCTTCAAGAACTGGACAACTTT...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATCCACCCTCAAAACGTaGACTTTTCAGATACCTTAC +
Preference number: 5 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSSTLKT*TFQIPY
Trigger: GTAAGGTATCTGAAAAGTCAACGTTTTGAGGGTGGA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CCTCTCCTGCTTTTAAGAGACAGGACTAGCAGAGTGATCTTGAGCCCGCTGTTTACGCCGAGGAGGAGTTaGAAGGTCCCTCTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: PLLLLRDRTSRVILSPLFTPRRS*KVPLSQ
Trigger: TTGGGAAAGAGGGACCTTCAAACTCCTCCTCGGCGT...AAACAGCGGGCTCAAGATCACTCTGCTAGTCCTGTCTCTTAAAAGCAGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTCCTTGCCTCCATTCTaGGGGGCTGGCGCCGTGCAC +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSSLPPF*GAGAVH
Trigger: GTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGGA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAGGCCGTCGCAGTCCTaGCCTCCATTCTTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETRPSQS*PPFLGA
Trigger: AGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCCT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAACCAAAGATGGCCAGCTaGAGGCGCTTCGCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQPKMAS*RRFAAA
Trigger: AGCGGCTGCGAAGCGCCTCAAGCTGGCCATCTTTGG...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCATGCTTGTTTGTGGGGTaGAACATGAATCACTGTCTT +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCACLFVG*NMNHCL
Trigger: AAGACAGTGATTCATGTTCAACCCCACAAACAAGCA...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATCTTCAGTTTTGGTTTaGCTACTGGGCTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSSSVLV*LLGFDS
Trigger: AGAATCAAAGCCCAGTAGCAAAACCAAAACTGAAGA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCATTGTGTATGAATGAGTaGATGTACTGGGCTCACAGT +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCALCMNE*MYWAHS
Trigger: ACTGTGAGCCCAGTACATCAACTCATTCATACACAA...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATATCTGCTCTGCCCCCACTaGGGAAGTCCAGGGAGGCGC +
Preference number: 5 (lower is better)
Translates to: QFSSKLDIGKVSAPEKAYLLCPH*GSPGRR
Trigger: GCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCAG...ATATGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS GCA 90 bp CCACCGTTTCATGTCTTCCCATTTCTTCCAAGACAGCTGCCAGCATaGTCAGGTTTCCATCTGGGAAGTTCTGTGCTTCCCAAAGATCCA +
Preference number: 5 (lower is better)
Translates to: PPFHVFPFLPRQLPA*SGFHLGSSVLPKDP
Trigger: TGGATCTTTGGGAAGCACAGAACTTCCCAGATGGAAACCTGAGCATGCTGGCAGCTGTCTTGGAAGAAATGGGAAGACATGAAACGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATTGAGTGGTGCCGGGTaGGTACAAGTCCTTGTACGT +
Preference number: 5 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTLSGAG*VQVLVR
Trigger: ACGTACAAGGACTTGTACCAACCCGGCACCACTCAA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCAAGGCCGTCGCAGTCCTaGCCTCCATTCTTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKARPSQS*PPFLGA
Trigger: AGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCCT...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTGCCGCACACAGAGTTaGCAAACCAGCTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLCRTQS*QTSSTV
Trigger: CACAGTGGAGCTGGTTTGCAAACTCTGTGTGCGGCA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGCTCCTGCTGCAGTCTaGCCTGTGAAGTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLAPAAV*PVKCIG
Trigger: ACCAATGCACTTCACAGGCAAGACTGCAGCAGGAGC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCATTATGCAGTTTGATATaGAACACCTCACCCAAAAGT +
Preference number: 5 (lower is better)
Translates to: QGEKRGTPGAGIPHLHHSLCSLI*NTSPKS
Trigger: ACTTTTGGGTGAGGTGTTCAATATCAAACTGCATAA...TGAGTGGTGGAGGTGAGGGATACCAGCTCCGGGTGTGCCTCTTTTCTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAGAAACATTACTTCATaGCCCAGAGGCAAAGTTCTA +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCARNITS*PRGKVL
Trigger: TAGAACTTTGCCTCTGGGCAATGAAGTAATGTTTCT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTATTTTAATAAGATCGATACAGAATTATCTGGATCGTAACTTCCCCGTGGTCCTGCTCTGCCCCCACTaGGGAAGTCCAGGGAGGCGC +
Preference number: 5 (lower is better)
Translates to: VILIRSIQNYLDRNFPVVLLCPH*GSPGRR
Trigger: GCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCAG...GACCACGGGGAAGTTACGATCCAGATAATTCTGTATCGATCTTATTAAAATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS TCA 90 bp GGTACAGCCAGCAGATCTTGTCTTGCTGCCTTGATGTTCACAGGCTaGAAGCCCCCATTGAGTGCCGAAGAGTCAATAATATCTGACTCA +
Preference number: 5 (lower is better)
Translates to: GTASRSCLAALMFTG*KPPLSAEESIISDS
Trigger: TGAGTCAGATATTATTGACTCTTCGGCACTCAATGGGGGCTTTCAGCCTGTGAACATCAAGGCAGCAAGACAAGATCTGCTGGCTGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTCCTTGCCTCCATTCTaGGGGGCTGGCGCCGTGCAC +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLSLPPF*GAGAVH
Trigger: GTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGGA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCATCCTTGCCTCCATTCTaGGGGGCTGGCGCCGTGCAC +
Preference number: 5 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSASLPPF*GAGAVH
Trigger: GTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGGA...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAAAACATCCACTGAACTaGTTTATAGTGCAATCTCTC +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAKHPLN*FIVQSL
Trigger: GAGAGATTGCACTATAAACAAGTTCAGTGGATGTTT...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CTGGATTTCCTCCTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCAGCAACTGAAGATATGTaGTGTATGAATGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: LDFLLSCDSPGRPQTPCAATEDM*CMNELM
Trigger: CATCAACTCATTCATACACAACATATCTTCAGTTGC...TGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAGGAGGAAATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCACCACAAGTAGACCACTaGCTCCATGGCGTCCACCTG +
Preference number: 5 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPPQVDH*LHGVHL
Trigger: CAGGTGGACGCCATGGAGCAAGTGGTCTACTTGTGG...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATACAGCCAGCAGATCTaGTCTTGCTGCCTTGATGTT +
Preference number: 5 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTYSQQI*SCCLDV
Trigger: AACATCAAGGCAGCAAGACAAGATCTGCTGGCTGTA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTTTGGTCATTGGGATTTaGTCTGAGACGTCATGCAGG +
Preference number: 5 (lower is better)
Translates to: VGKRLSRQQADEELLIIGLVIGI*SETSCR
Trigger: CCTGCATGACGTCTCAGACAAAATCCCAATGACCAA...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGCAGTGCAGGTTTCTTaGAGATCCACTCCAAACATG +
Preference number: 5 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTAVQVS*RSTPNM
Trigger: CATGTTTGGAGTGGATCTCAAAGAAACCTGCACTGC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATGCCGCACACAGAGTTaGCAAACCAGCTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQCRTQS*QTSSTV
Trigger: CACAGTGGAGCTGGTTTGCAAACTCTGTGTGCGGCA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAGAGCCTTGTTGCTCTTaGCCAGGAGAAGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTEPCCS*PGEVKS
Trigger: ACTTTTCACTTCTCCTGGCAAAGAGCAACAAGGCTC...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGAGACAAGAGCCTTGTaGCTCTTTGCCAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLETRAL*LFARRS
Trigger: ACTTCTCCTGGCAAAGAGCAACAAGGCTCTTGTCTC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTCATGAAACTGATGACTaGTCCAGAACAACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VGKRLSRQQADEELLIIGHETDD*SRTTAQ
Trigger: CTGGGCAGTTGTTCTGGACAAGTCATCAGTTTCATG...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS TCA 90 bp CACAGGCTGAAAGCCCCCATTGAGTGCCGAAGAGTCAATAATATCTaGCTCAAAGTCACGATGATTCTTCCGATACACAAACAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: HRLKAPIECRRVNNI*LKVTMILPIHKQGH
Trigger: GTGGCCTTGTTTGTGTATCGGAAGAATCATCGTGACTTTGAGTCAGATATTATTGACTCTTCGGCACTCAATGGGGGCTTTCAGCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 90 bp AGTAAGACTTCCTGTTCCAAAGACACTTCCTTTCCTAGGGGTTCCTaGTCAAATGTCTTCCGTAGATATGCAATGCGCACATACGCCTTC +
Preference number: 5 (lower is better)
Translates to: SKTSCSKDTSFPRGS*SNVFRRYAMRTYAF
Trigger: GAAGGCGTATGTGCGCATTGCATATCTACGGAAGACATTTGAGCAGGAACCCCTAGGAAAGGAAGTGTCTTTGGAACAGGAAGTCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATCTGGGTGGCAGGGCTaGCTTTACAGTACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETSGWQG*LYSTGS
Trigger: TGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAGA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATTGAGTGGTGCCGGGTaGGTACAAGTCCTTGTACGT +
Preference number: 5 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETLSGAG*VQVLVR
Trigger: ACGTACAAGGACTTGTACCAACCCGGCACCACTCAA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCCCATCAGTGCAGTTCTaGGATTGCAAGACGAGGCCG +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSPSVQF*DCKTRP
Trigger: CGGCCTCGTCTTGCAATCCAAGAACTGCACTGATGG...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGAGGTGTTGTACACTTaGATTTTCAGGTTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: VGKRLSRQQADEELLIIGEVLYT*IFRLGS
Trigger: ACTGCCCAACCTGAAAATCAAAGTGTACAACACCTC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTACAGCACCTGAGGTGTaGTACACTTTGATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: VGKRLSRQQADEELLIIGTAPEV*YTLIFR
Trigger: CCTGAAAATCAAAGTGTACAACACCTCAGGTGCTGT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGATGGATCAGTCTGCCTaGCTAGACTCTGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLMDQSA*LDSGSS
Trigger: TGAAGAACCAGAGTCTAGCAAGGCAGACTGATCCAT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACATGGTGTTACACAGGTTaGTCATCACCATGCCAGTTA +
Preference number: 5 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTWCYTG*SSPCQL
Trigger: TAACTGGCATGGTGATGACAAACCTGTGTAACACCA...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCAACGCCGAGGAGGAGTTaGAAGGTCCCTCTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKATPRRS*KVPLSQ
Trigger: TTGGGAAAGAGGGACCTTCAAACTCCTCCTCGGCGT...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS TCA 90 bp AGCAGAGTGATCTTGAGCCCGCTGTTTCTCAAGGACCATAGACTATaGCAGTGGCAGTTGTACTTTTCCTCTTGGCAACAATGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: SRVILSPLFLKDHRL*QWQLYFSSWQQCFW
Trigger: CCAAAAACATTGTTGCCAAGAGGAAAAGTACAACTGCCACTGTCATAGTCTATGGTCCTTGAGAAACAGCGGGCTCAAGATCACTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CAA 90 bp ACACATCCATCTGAATGGTACTGTGGGGTAGGCAATATTTTACTTCCACTCTTTTCTGGGTGGCAGGGCTaGCTTTACAGTACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: THPSEWYCGVGNILLPLFSGWQG*LYSTGS
Trigger: TGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAGA...AAAGAGTGGAAGTAAAATATTGCCTACCCCACAGTACCATTCAGATGGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CAA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATCTGGGTGGCAGGGCTaGCTTTACAGTACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKASGWQG*LYSTGS
Trigger: TGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAGA...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACCACAAGTAGACCACTaGCTCCATGGCGTCCACCTG +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRPQVDH*LHGVHL
Trigger: CAGGTGGACGCCATGGAGCAAGTGGTCTACTTGTGG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGGAGGTGTTGTACACTTaGATTTTCAGGTTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLEVLYT*IFRLGS
Trigger: ACTGCCCAACCTGAAAATCAAAGTGTACAACACCTC...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAATGACCACACCCACCTaGATAGGTGAAAAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETMTTPT*IGEKVG
Trigger: TCCCACCTTTTCACCTATCAAGGTGGGTGTGGTCAT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGCTGTGCCAGTACACTaGCGGAGTACCTGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSAVPVH*RSTCWF
Trigger: AAACCAACAGGTACTCCGCAAGTGTACTGGCACAGC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTAGGAAGGTCACCAACTaGCTTCAGCTCAACATTAAA +
Preference number: 5 (lower is better)
Translates to: VGKRLSRQQADEELLIIGRKVTN*LQLNIK
Trigger: TTTAATGTTGAGCTGAAGCAAGTTGGTGACCTTCCT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACCGACCTTTCTGCAGTaGAACTGTTCCAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSPTFLQ*NCSKGD
Trigger: GTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CCTCTCCTGCTTTTAAGAGACAGGACTAGCAGAGTGATCTTGAGCCCGCTGTTTCTCAACTTCCTGTCCTaGAGGATAAGAATGTTACTT +
Preference number: 5 (lower is better)
Translates to: PLLLLRDRTSRVILSPLFLNFLS*RIRMLL
Trigger: AAGTAACATTCTTATCCTCAAGGACAGGAAGTTGAG...AAACAGCGGGCTCAAGATCACTCTGCTAGTCCTGTCTCTTAAAAGCAGGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS TCA 90 bp CCATTGAGTGCCGAAGAGTCAATAATATCTGACTCAAAGTCACGATaGTTCTTCCGATACACAAACAAGGCCACAACTACAGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: PLSAEESIISDSKSR*FFRYTNKATTTEIA
Trigger: GGCGATCTCTGTAGTTGTGGCCTTGTTTGTGTATCGGAAGAATCATCGTGACTTTGAGTCAGATATTATTGACTCTTCGGCACTCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS-3UTR CAA 90 bp GGTCTCAACTTCCTGTCCTTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGCAACACAGGTGTAATTaGCAGTATCAGAGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: GLNFLSLRIRMLLSFWYRQHRCN*QYQRVG
Trigger: CCCGACTCTCTGATACTGCAAATTACACCTGTGTTG...CCTATACCAGAAGGAAAGTAACATTCTTATCCTCAAGGACAGGAAGTTGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACCATCAGTGCAGTTCTaGGATTGCAAGACGAGGCCG +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRPSVQF*DCKTRP
Trigger: CGGCCTCGTCTTGCAATCCAAGAACTGCACTGATGG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCATCAGTGCAGTTCTaGGATTGCAAGACGAGGCCG +
Preference number: 5 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSAPSVQF*DCKTRP
Trigger: CGGCCTCGTCTTGCAATCCAAGAACTGCACTGATGG...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAATACAGCCAGCAGATCTaGTCTTGCTGCCTTGATGTT +
Preference number: 5 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQYSQQI*SCCLDV
Trigger: AACATCAAGGCAGCAAGACAAGATCTGCTGGCTGTA...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAGAGCCTTGTTGCTCTTaGCCAGGAGAAGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETEPCCS*PGEVKS
Trigger: ACTTTTCACTTCTCCTGGCAAAGAGCAACAAGGCTC...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AATCCGACCTTTCTGCAGTTGAACTGTTCCAAAGGGGACAGTAGGTGGATGACAAGAAACATTACTTCATaGCCCAGAGGCAAAGTTCTA +
Preference number: 5 (lower is better)
Translates to: NPTFLQLNCSKGDSRWMTRNITS*PRGKVL
Trigger: TAGAACTTTGCCTCTGGGCAATGAAGTAATGTTTCT...TGTCATCCACCTACTGTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACTTGCGGAGTACCTGTaGGTTTGTCCTGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRLAEYL*VCPADA
Trigger: GGCATCAGCAGGACAAACCAACAGGTACTCCGCAAG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS TCA 90 bp CATCTACTATGTGGTCCTTCTGATGAACCCATTCACTATTACACTTaGAATAGATCTGGGTGGCAGGGCTTGCTTTACAGTACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: HLLCGPSDEPIHYYT*NRSGWQGLLYSTGS
Trigger: TGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAGATCTATTTCAAGTGTAATAGTGAATGGGTTCATCAGAAGGACCACATAGTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS-3UTR CAA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCACAACACAGGTGTAATTaGCAGTATCAGAGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPQHRCN*QYQRVG
Trigger: CCCGACTCTCTGATACTGCAAATTACACCTGTGTTG...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGGTTGGTACAAGTCCTaGTACGTTTCTGATACCCTC +
Preference number: 5 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSGWYKS*YVSDTL
Trigger: GAGGGTATCAGAAACGTACAAGGACTTGTACCAACC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGGTTGGTACAAGTCCTaGTACGTTTCTGATACCCTC +
Preference number: 5 (lower is better)
Translates to: VSIVQFSSKLDIGKVSAPGWYKS*YVSDTL
Trigger: GAGGGTATCAGAAACGTACAAGGACTTGTACCAACC...TGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGGTTGGTACAAGTCCTaGTACGTTTCTGATACCCTC +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSGWYKS*YVSDTL
Trigger: GAGGGTATCAGAAACGTACAAGGACTTGTACCAACC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp ATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAATTGAGTGGTGCCGGGTaGGTACAAGTCCTTGTACGT +
Preference number: 5 (lower is better)
Translates to: IVQFSSKLDIGKVSAPEKLSGAG*VQVLVR
Trigger: ACGTACAAGGACTTGTACCAACCCGGCACCACTCAA...TTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAACAGCACCTGAGGTGTaGTACACTTTGATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQTAPEV*YTLIFR
Trigger: CCTGAAAATCAAAGTGTACAACACCTCAGGTGCTGT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCAATGGATCAGTCTGCCTaGCTAGACTCTGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: VQFSSKLDIGKVSAPEKAMDQSA*LDSGSS
Trigger: TGAAGAACCAGAGTCTAGCAAGGCAGACTGATCCAT...TGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGCAGTGCAGGTTTCTTaGAGATCCACTCCAAACATG +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSAVQVS*RSTPNM
Trigger: CATGTTTGGAGTGGATCTCAAAGAAACCTGCACTGC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGTCTTCAGTTTTGGTTTaGCTACTGGGCTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLSSVLV*LLGFDS
Trigger: AGAATCAAAGCCCAGTAGCAAAACCAAAACTGAAGA...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCAGTCTGTTCAGCAACTaGTGTGCCTCCAGCCTAAAA +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSSLFSN*CASSLK
Trigger: TTTTAGGCTGGAGGCACACAAGTTGCTGAACAGACT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTGCAACTGAAGATATGTaGTGTATGAATGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: VGKRLSRQQADEELLIIGATEDM*CMNELM
Trigger: CATCAACTCATTCATACACAACATATCTTCAGTTGC...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCACATGAAACTGATGACTaGTCCAGAACAACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSHETDD*SRTTAQ
Trigger: CTGGGCAGTTGTTCTGGACAAGTCATCAGTTTCATG...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTAGGCAAGCGTCTGAGTAGACAGCAGGCTGATGAAGAGCTGCTAATAATTGGTACACATTACATTTGGTaGAATGAGCCCGTTAATATC +
Preference number: 5 (lower is better)
Translates to: VGKRLSRQQADEELLIIGTHYIW*NEPVNI
Trigger: GATATTAACGGGCTCATTCAACCAAATGTAATGTGT...ACCAATTATTAGCAGCTCTTCATCAGCCTGCTGTCTACTCAGACGCTTGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACCGACCTTTCTGCAGTaGAACTGTTCCAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRPTFLQ*NCSKGD
Trigger: GTCCCCTTTGGAACAGTTCAACTGCAGAAAGGTCGG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS CCA 90 bp CTTATTCTTCACAATATAAGCTTCTTCAGGCTCAATAAGGAAATGTaGCAGAGGCTCAGGTGGATCAGAAGGAAAAGTTTCTGGGAGTTC +
Preference number: 5 (lower is better)
Translates to: LILHNISFFRLNKEM*QRLRWIRRKSFWEF
Trigger: GAACTCCCAGAAACTTTTCCTTCTGATCCACCTGAGCCTCTGCCACATTTCCTTATTGAGCCTGAAGAAGCTTATATTGTGAAGAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS-3UTR CAA 90 bp TCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAATACAGCCAGCAGATCTaGTCTTGCTGCCTTGATGTT +
Preference number: 5 (lower is better)
Translates to: SIVQFSSKLDIGKVSAPEYSQQI*SCCLDV
Trigger: AACATCAAGGCAGCAAGACAAGATCTGCTGGCTGTA...TTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp CAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATATTTGGTCATTGGGATTTaGTCTGAGACGTCATGCAGG +
Preference number: 5 (lower is better)
Translates to: QFSSKLDIGKVSAPEKAYLVIGI*SETSCR
Trigger: CCTGCATGACGTCTCAGACAAAATCCCAATGACCAA...ATATGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp TACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAACTTTGATTTTCAGGTaGGGCAGTGGATCCAGAATT +
Preference number: 5 (lower is better)
Translates to: YSKRELHNNKSVPYRKSQTLIFR*GSGSRI
Trigger: AATTCTGGATCCACTGCCCAACCTGAAAATCAAAGT...TTGGCTTTTCCGATATGGAACACTTTTGTTGTTGTGGAGTTCCCTCTTGCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAATTGACAGGCGCAGGTaGTGGGTGCTGCCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRIDRRR*WVLPLK
Trigger: TTTTAAAGGCAGCACCCACAACCTGCGCCTGTCAAT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATATTTAGCCAGCAATTaGCTCTTCCAGAGGGAATGG +
Preference number: 5 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSYLASN*LFQREW
Trigger: CCATTCCCTCTGGAAGAGCAAATTGCTGGCTAAATA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAATGACCACACCCACCTaGATAGGTGAAAAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRMTTPT*IGEKVG
Trigger: TCCCACCTTTTCACCTATCAAGGTGGGTGTGGTCAT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCTTAGCTGTGAGAACCTaGGTGTTACACAGGTTTGTC +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSLAVRT*VLHRFV
Trigger: GACAAACCTGTGTAACACCAAGGTTCTCACAGCTAA...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAAAGTTGTCCAGTTCTaGAAGAGCCTAACTTGCTCA +
Preference number: 5 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETKVVQF*KSLTCS
Trigger: TGAGCAAGTTAGGCTCTTCAAGAACTGGACAACTTT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACATCCACCCTCAAAACGTaGACTTTTCAGATACCTTAC +
Preference number: 5 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETSTLKT*TFQIPY
Trigger: GTAAGGTATCTGAAAAGTCAACGTTTTGAGGGTGGA...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AGGCTGCTGATCAGCAAAACCTGCCTACAATTCATCTTCTACACACCAGTACTGAGAGTTGTTTTAACATaGAGAACCTATGTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: RLLISKTCLQFIFYTPVLRVVLT*RTYVAQ
Trigger: CTGAGCTACATAGGTTCTCAATGTTAAAACAACTCT...CAGTACTGGTGTGTAGAAGATGAATTGTAGGCAGGTTTTGCTGATCAGCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACAACACAGGTGTAATTaGCAGTATCAGAGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRQHRCN*QYQRVG
Trigger: CCCGACTCTCTGATACTGCAAATTACACCTGTGTTG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTTGGTCATTGGGATTTaGTCTGAGACGTCATGCAGG +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLVIGI*SETSCR
Trigger: CCTGCATGACGTCTCAGACAAAATCCCAATGACCAA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAAAAGCATATACAGCACCTGAGGTGTaGTACACTTTGATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: QFSSKLDIGKVSAPEKAYTAPEV*YTLIFR
Trigger: CCTGAAAATCAAAGTGTACAACACCTCAGGTGCTGT...ATATGCTTTTTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCGATTATCTGAGACACTaGATGCACACGATTTGTAGC +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSDYLRH*MHTICS
Trigger: GCTACAAATCGTGTGCATCAAGTGTCTCAGATAATC...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCAGATTATCTGAGACACTaGATGCACACGATTTGTAGC +
Preference number: 5 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSDYLRH*MHTICS
Trigger: GCTACAAATCGTGTGCATCAAGTGTCTCAGATAATC...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAGTCTGTTCAGCAACTaGTGTGCCTCCAGCCTAAAA +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLSLFSN*CASSLK
Trigger: TTTTAGGCTGGAGGCACACAAGTTGCTGAACAGACT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTGTGTATGAATGAGTaGATGTACTGGGCTCACAGT +
Preference number: 5 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSLCMNE*MYWAHS
Trigger: ACTGTGAGCCCAGTACATCAACTCATTCATACACAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp TTGAGGATAAGAATGTTACTTTCCTTCTGGTATAGGGAAGCCATCTTTCAGCTGCACTACATTCATCCTTaGGAACAGCATAGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LRIRMLLSFWYREAIFQLHYIHP*EQHSGF
Trigger: GAAACCACTATGCTGTTCCAAAGGATGAATGTAGTG...CAGCTGAAAGATGGCTTCCCTATACCAGAAGGAAAGTAACATTCTTATCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504962.1
CDS-3UTR CAA 90 bp TCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCACCAGAAACTTTGATTTTCAGGTaGGGCAGTGGATCCAGAATT +
Preference number: 5 (lower is better)
Translates to: SIVQFSSKLDIGKVSAPETLIFR*GSGSRI
Trigger: AATTCTGGATCCACTGCCCAACCTGAAAATCAAAGT...TTCTGGTGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCAGAGGTGTTGTACACTTaGATTTTCAGGTTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSAEVLYT*IFRLGS
Trigger: ACTGCCCAACCTGAAAATCAAAGTGTACAACACCTC...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATATTTAGCCAGCAATTaGCTCTTCCAGAGGGAATGG +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRYLASN*LFQREW
Trigger: CCATTCCCTCTGGAAGAGCAAATTGCTGGCTAAATA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCATGTACATGGGCAGTaGTATCTGTTTTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLHVHGQ*YLFSFW
Trigger: CCAGAAGGAAAACAGATACAACTGCCCATGTACATG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTTTAGCTGTGAGAACCTaGGTGTTACACAGGTTTGTC +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLLAVRT*VLHRFV
Trigger: GACAAACCTGTGTAACACCAAGGTTCTCACAGCTAA...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTGAGGTGACTGTTCATTaGGAAGATGCCGTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLEVTVH*EDAVCE
Trigger: TTCACAAACGGCATCTTCCAAATGAACAGTCACCTC...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GTTTTCTGCATAGCAGAGGTGACTGTTCATTTGGAAGATGCCGTTTGTGAAACAAGAGTTGTTTTAACATaGAGAACCTATGTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: VFCIAEVTVHLEDAVCETRVVLT*RTYVAQ
Trigger: CTGAGCTACATAGGTTCTCAATGTTAAAACAACTCT...TGTTTCACAAACGGCATCTTCCAAATGAACAGTCACCTCTGCTATGCAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTATGAGAACTGGTTTCTaGATCTCCAGTTTAGAGTCC +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLMRTGF*ISSLES
Trigger: GGACTCTAAACTGGAGATCAAGAAACCAGTTCTCAT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GATAATAAAGGGATGTCATCTCTCAGTGAACAGCATAATGCAATGATGCAGAGCAAACATCCACTGAACTaGTTTATAGTGCAATCTCTC +
Preference number: 5 (lower is better)
Translates to: DNKGMSSLSEQHNAMMQSKHPLN*FIVQSL
Trigger: GAGAGATTGCACTATAAACAAGTTCAGTGGATGTTT...GCTCTGCATCATTGCATTATGCTGTTCACTGAGAGATGACATCCCTTTATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp CATAGTTGCTCCCCTCTAGTTTTCACTAGGCATAGAAGTTTCTTTGACCATTCATTATGCAGTTTGATATaGAACACCTCACCCAAAAGT +
Preference number: 5 (lower is better)
Translates to: HSCSPLVFTRHRSFFDHSLCSLI*NTSPKS
Trigger: ACTTTTGGGTGAGGTGTTCAATATCAAACTGCATAA...TGAATGGTCAAAGAAACTTCTATGCCTAGTGAAAACTAGAGGGGAGCAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTAGGAAGGTCACCAACTaGCTTCAGCTCAACATTAAA +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLRKVTN*LQLNIK
Trigger: TTTAATGTTGAGCTGAAGCAAGTTGGTGACCTTCCT...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGATATCACATAGAATGGTaGATGAAGTGGCTTCCTATG +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRYHIEW*MKWLPM
Trigger: CATAGGAAGCCACTTCATCAACCATTCTATGTGATA...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp AAAAGTAAACCACAGTCATGTTCTAAAGGTTCCGATTCATACACATGTCTGCTTCATACACATGTCTGCTaGTTCTTCAGTTTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: KSKPQSCSKGSDSYTCLLHTHVC*FFSFGF
Trigger: AAAACCAAAACTGAAGAACAAGCAGACATGTGTATG...AAGCAGACATGTGTATGAATCGGAACCTTTAGAACATGACTGTGGTTTACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGACATACACATGTCTGCTaGTTCTTCAGTTTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRHTHVC*FFSFGF
Trigger: AAAACCAAAACTGAAGAACAAGCAGACATGTGTATG...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp GGACCTTCTAAGTTTGAAAGCAATCTAACAGCTATTACTTTACTCCAAAGGAGAACACATTACATTTGGTaGAATGAGCCCGTTAATATC +
Preference number: 5 (lower is better)
Translates to: GPSKFESNLTAITLLQRRTHYIW*NEPVNI
Trigger: GATATTAACGGGCTCATTCAACCAAATGTAATGTGT...TCTCCTTTGGAGTAAAGTAATAGCTGTTAGATTGCTTTCAAACTTAGAAGGTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS-3UTR CAA 90 bp ATTGTGTCTATTGTACAATTCTCCTCCAAGTTAGACATTGGTAAAGTCAGTGCAGGTTTATTGTGTCTATaGTACAATTCTCCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: IVSIVQFSSKLDIGKVSAGLLCL*YNSPPS
Trigger: ACTTGGAGGAGAATTGTACAATAGACACAATAAACC...TGCACTGACTTTACCAATGTCTAACTTGGAGGAGAATTGTACAATAGACACAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506749.5
CDS CCA 72 bp CTGACGTCTCCCGCGAGCGACTGCTCTGCCCCCACTTaGGAAGTCCAGGGAGGCGCAAGGCGGCCACCTCCG +
Preference number: 6 (lower is better)
Translates to: LTSPASDCSAPT*EVQGGARRPPP
Trigger: CGGAGGTGGCCGCCTTGCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCAGTCGCTCGCGGGAGACGTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS CAA 90 bp TGCCTTCTAACTGACGTCTCCCGCGAGCGACTGCTCTGCCCCCACTaGGGAAGTCCAGGGAGGCGCAAGGCGGCCACCTCCGCCGCTCCC +
Preference number: 6 (lower is better)
Translates to: CLLTDVSRERLLCPH*GSPGRRKAATSAAP
Trigger: GGGAGCGGCGGAGGTGGCCGCCTTGCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCAGTCGCTCGCGGGAGACGTCAGTTAGAAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS CAA 72 bp ACTGACGTCTCCCGCGAGCGACTGCTCTGCCCCCACTaGGGAAGTCCAGGGAGGCGCAAGGCGGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: TDVSRERLLCPH*GSPGRRKAATS
Trigger: GGAGGTGGCCGCCTTGCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCAGTCGCTCGCGGGAGACGTCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS CAA 72 bp TGCAAGACGAGGCCGTCGCAGTCCTTGCCTCCATTCTaGGGGGCTGGCGCCGTGCACTCCCTCCTGCGCCAG +
Preference number: 6 (lower is better)
Translates to: CKTRPSQSLPPF*GAGAVHSLLRQ
Trigger: CTGGCGCAGGAGGGAGTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCCTCGTCTTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp CGCAGTCCTTGCCTCCATTCTTGGGGGCTGGCGCCGTaGACTCCCTCCTGCGCCAGTGGGTGCACTCAGTTC +
Preference number: 6 (lower is better)
Translates to: RSPCLHSWGLAP*TPSCASGCTQF
Trigger: GAACTGAGTGCACCCACTGGCGCAGGAGGGAGTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGGACTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp TGCCTTCTAACTGACGTCTCCCGCGAGCGACTGCTCTaGCCCCACTTGGGAAGTCCAGGGAGGCGCAAGGCG +
Preference number: 6 (lower is better)
Translates to: CLLTDVSRERLL*PHLGSPGRRKA
Trigger: CGCCTTGCGCCTCCCTGGACTTCCCAAGTGGGGGCAGAGCAGTCGCTCGCGGGAGACGTCAGTTAGAAGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS TCA 72 bp GCGAGGAGCAGCACAGGGGCCCAAAGATGGCCAGCTTaGGGCGCTTCGCAGCCGCTTTGGTGGTGGAATGTC +
Preference number: 6 (lower is better)
Translates to: ARSSTGAQRWPA*GASQPLWWWNV
Trigger: GACATTCCACCACCAAAGCGGCTGCGAAGCGCCTCAAGCTGGCCATCTTTGGGCCCCTGTGCTGCTCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453304.6
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp AGTTCTTGGATTGCAAGACGAGGCCGTCGCAGTCCTTaGCTCCATTCTTGGGGGCTGGCGCCGTGCACTCCC +
Preference number: 6 (lower is better)
Translates to: SSWIARRGRRSP*LHSWGLAPCTP
Trigger: GGGAGTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCCTCGTCTTGCAATCCAAGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS CCA 72 bp TTATGGGCCAGCATCCTCCAGTCATGGCCTCTCGTCTaGGGGGCATCCAGGCTGCTACAGAGCTTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: LWASILQSWPLV*GASRLLQSFCR
Trigger: CCGGCAGAAGCTCTGTAGCAGCCTGGATGCCCCCCAGACGAGAGGCCATGACTGGAGGATGCTGGCCCATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS CAA 72 bp CAGTTCTTGGATTGCAAGACGAGGCCGTCGCAGTCCTaGCCTCCATTCTTGGGGGCTGGCGCCGTGCACTCC +
Preference number: 6 (lower is better)
Translates to: QFLDCKTRPSQS*PPFLGAGAVHS
Trigger: GGAGTGCACGGCGCCAGCCCCCAAGAATGGAGGCAAGGACTGCGACGGCCTCGTCTTGCAATCCAAGAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS CAA 72 bp AGCGAGGAGCAGCACAGGGGCCCAAAGATGGCCAGCTaGAGGCGCTTCGCAGCCGCTTTGGTGGTGGAATGT +
Preference number: 6 (lower is better)
Translates to: SEEQHRGPKMAS*RRFAAALVVEC
Trigger: ACATTCCACCACCAAAGCGGCTGCGAAGCGCCTCAAGCTGGCCATCTTTGGGCCCCTGTGCTGCTCCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453304.6
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp GGGCATCCTGGGTGTCATCCAGACAGTAGACTCGGATaGTGTACTCCAGCGAGGAGCAGCACAGGGGCCCAA +
Preference number: 6 (lower is better)
Translates to: GHPGCHPDSRLG*CTPARSSTGAQ
Trigger: TTGGGCCCCTGTGCTGCTCCTCGCTGGAGTACAGCATCCGAGTCTACTGTCTGGATGACACCCAGGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453304.6
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp GGTTCCTCTGACACGGTGCAGTTGAGCTGGAAGATCTaGCCTTCTCCTTCCACCTGCCGCACACAGAGTTTG +
Preference number: 6 (lower is better)
Translates to: GSSDTVQLSWKI*PSPSTCRTQSL
Trigger: CAAACTCTGTGTGCGGCAGGTGGAAGGAGAAGGGCAGATCTTCCAGCTCAACTGCACCGTGTCAGAGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS CCA 72 bp ATGCCAGTAGGTTCCTCTGACACGGTGCAGTTGAGCTaGAAGATCTGCCCTTCTCCTTCCACCTGCCGCACA +
Preference number: 6 (lower is better)
Translates to: MPVGSSDTVQLS*KICPSPSTCRT
Trigger: TGTGCGGCAGGTGGAAGGAGAAGGGCAGATCTTCCAGCTCAACTGCACCGTGTCAGAGGAACCTACTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS GCA 72 bp CTTGAGCAGTATTTTCCAGTCCTCGGTATTGGGGTCTaGGCAGTGATGCATAGTGAGGACGACTGGGCGGGT +
Preference number: 6 (lower is better)
Translates to: LEQYFPVLGIGV*AVMHSEDDWAG
Trigger: ACCCGCCCAGTCGTCCTCACTATGCATCACTGCGCAGACCCCAATACCGAGGACTGGAAAATACTGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453304.6
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp CAGTTGAGCTGGAAGATCTGCCCTTCTCCTTCCACCTaGCGCACACAGAGTTTGCAAACCAGCTCCACTGTG +
Preference number: 6 (lower is better)
Translates to: QLSWKICPSPST*RTQSLQTSSTV
Trigger: CACAGTGGAGCTGGTTTGCAAACTCTGTGTGCGGCAGGTGGAAGGAGAAGGGCAGATCTTCCAGCTCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS GCA 72 bp ACAGCTGAAAGCCCCACTGGGCAGAAGCTGAATCCGTaGACCGCGAAGCAGTCCGAAGAAATAACGACAACC +
Preference number: 6 (lower is better)
Translates to: TAESPTGQKLNP*TAKQSEEITTT
Trigger: GGTTGTCGTTATTTCTTCGGACTGCTTCGCGGTGCACGGATTCAGCTTCTGCCCAGTGGGGCTTTCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504962.1
ENST00000506749.5
CDS TCA 72 bp AGTGGTGCCGGGTTGGTACAAGTCCTTGTACGTTTCTaGTACCCTCGTCCACAGCGGCTGTTACACACAGAC +
Preference number: 6 (lower is better)
Translates to: SGAGLVQVLVRF*YPRPQRLLHTD
Trigger: GTCTGTGTGTAACAGCCGCTGTGGACGAGGGTATCAGAAACGTACAAGGACTTGTACCAACCCGGCACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp CTGAATCAGGAGCAGTCTGCATGCAAAGCCCATCAGTaGAGTTCTTGGATTGCAAGACGAGGCCGTCGCAGT +
Preference number: 6 (lower is better)
Translates to: LNQEQSACKAHQ*SSWIARRGRRS
Trigger: ACTGCGACGGCCTCGTCTTGCAATCCAAGAACTGCACTGATGGGCTTTGCATGCAGACTGCTCCTGATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS CCA 72 bp GGGGACAGCTTGGACGTAAACTCAGAGAGGTCATCTTaGGGGGTGACAGCACCTGAGGTGTTGTACACTTTG +
Preference number: 6 (lower is better)
Translates to: GDSLDVNSERSS*GVTAPEVLYTL
Trigger: CAAAGTGTACAACACCTCAGGTGCTGTCACCCCCCAAGATGACCTCTCTGAGTTTACGTCCAAGCTGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS CAA 90 bp TCTGAATCAGGAGCAGTCTGCATGCAAAGCCCATCAGTGCAGTTCTaGGATTGCAAGACGAGGCCGTCGCAGTCCTTGCCTCCATTCTTG +
Preference number: 6 (lower is better)
Translates to: SESGAVCMQSPSVQF*DCKTRPSQSLPPFL
Trigger: CAAGAATGGAGGCAAGGACTGCGACGGCCTCGTCTTGCAATCCAAGAACTGCACTGATGGGCTTTGCATGCAGACTGCTCCTGATTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS TCA 72 bp CTGAGGGCTTCATTCTCCAACAACGACTGGGTCATCTaGGGGGACAGCTTGGACGTAAACTCAGAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: LRASFSNNDWVI*GDSLDVNSERS
Trigger: TGACCTCTCTGAGTTTACGTCCAAGCTGTCCCCTCAGATGACCCAGTCGTTGTTGGAGAATGAAGCCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp ACTCTGCCCTTCACAGAAGGCACCCCCATTGAGTGGTaGCGGGTTGGTACAAGTCCTTGTACGTTTCTGATA +
Preference number: 6 (lower is better)
Translates to: TLPFTEGTPIEW*RVGTSPCTFLI
Trigger: TATCAGAAACGTACAAGGACTTGTACCAACCCGGCACCACTCAATGGGGGTGCCTTCTGTGAAGGGCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp TGCCAGCATGCTCAGGTTTCCATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGATTACGCCAGTTGGGCT +
Preference number: 6 (lower is better)
Translates to: CQHAQVSIWEVL*FPKIQDYASWA
Trigger: AGCCCAACTGGCGTAATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGATGGAAACCTGAGCATGCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS CAA 90 bp CTCAGCTGTGATTCACCTGGACGGCCACAGACTCCCTGTGCATTTTaGTCCTTCATTTCCCCTTCCAGCATGGTGGTTAATACTGCCCTT +
Preference number: 6 (lower is better)
Translates to: LSCDSPGRPQTPCAF*SFISPSSMVVNTAL
Trigger: AAGGGCAGTATTAACCACCATGCTGGAAGGGGAAATGAAGGACAAAAATGCACAGGGAGTCTGTGGCCGTCCAGGTGAATCACAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS CCA 72 bp ACCTCAGCCACTGGGATCCCTTCAGGTGGTCGACACTaGAGTAAGACTTCCTGTTCCAAAGACACTTCCTTT +
Preference number: 6 (lower is better)
Translates to: TSATGIPSGGRH*SKTSCSKDTSF
Trigger: AAAGGAAGTGTCTTTGGAACAGGAAGTCTTACTCCAGTGTCGACCACCTGAAGGGATCCCAGTGGCTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS TCA 72 bp ATCAGCAAGCTGACTCCTGAATTGGGAACAATAAGGTaGCCTCCCAGCGAGTTGAAGCTGCCAAATGCGGTA +
Preference number: 6 (lower is better)
Translates to: ISKLTPELGTIR*PPSELKLPNAV
Trigger: TACCGCATTTGGCAGCTTCAACTCGCTGGGAGGTCACCTTATTGTTCCCAATTCAGGAGTCAGCTTGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS TCA 72 bp TCAGGTGGATCAGAAGGAAAAGTTTCTGGGAGTTCATaGAAAAAGTCATCATCTTGGGCGGCGGAGCCAGTG +
Preference number: 6 (lower is better)
Translates to: SGGSEGKVSGSS*KKSSSWAAEPV
Trigger: CACTGGCTCCGCCGCCCAAGATGATGACTTTTTTCATGAACTCCCAGAAACTTTTCCTTCTGATCCACCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
CDS GCA 72 bp GGCCACAACTACAGAGATCGCCAGGCAAACGATCACTaGTATCACAATCCCAACATAGAGAGCAACATCATC +
Preference number: 6 (lower is better)
Translates to: GHNYRDRQANDH*YHNPNIESNII
Trigger: GATGATGTTGCTCTCTATGTTGGGATTGTGATAGCAGTGATCGTTTGCCTGGCGATCTCTGTAGTTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS TCA 72 bp AGCAGATCTTGTCTTGCTGCCTTGATGTTCACAGGCTaGAAGCCCCCATTGAGTGCCGAAGAGTCAATAATA +
Preference number: 6 (lower is better)
Translates to: SRSCLAALMFTG*KPPLSAEESII
Trigger: TATTATTGACTCTTCGGCACTCAATGGGGGCTTTCAGCCTGTGAACATCAAGGCAGCAAGACAAGATCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS TCA 72 bp TGCTATCACAATCCCAACATAGAGAGCAACATCATCTaGATCAGGAGCAGTCTGCATGCAAAGCCCATCAGT +
Preference number: 6 (lower is better)
Translates to: CYHNPNIESNII*IRSSLHAKPIS
Trigger: ACTGATGGGCTTTGCATGCAGACTGCTCCTGATTCAGATGATGTTGCTCTCTATGTTGGGATTGTGATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453304.6
ENST00000610318.4
CDS TCA 72 bp TGTGGTCCTTCTGATGAACCCATTCACTATTACACTTaGAATAGATCTGGGTGGCAGGGCTTGCTTTACAGT +
Preference number: 6 (lower is better)
Translates to: CGPSDEPIHYYT*NRSGWQGLLYS
Trigger: ACTGTAAAGCAAGCCCTGCCACCCAGATCTATTTCAAGTGTAATAGTGAATGGGTTCATCAGAAGGACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS GCA 72 bp ACTATTACACTTGAAATAGATCTGGGTGGCAGGGCTTaGTTTACAGTACAGGTTCACGGGCTTATTCTTCAC +
Preference number: 6 (lower is better)
Translates to: TITLEIDLGGRA*FTVQVHGLILH
Trigger: GTGAAGAATAAGCCCGTGAACCTGTACTGTAAAGCAAGCCCTGCCACCCAGATCTATTTCAAGTGTAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS CCA 72 bp CACAATATAAGCTTCTTCAGGCTCAATAAGGAAATGTaGCAGAGGCTCAGGTGGATCAGAAGGAAAAGTTTC +
Preference number: 6 (lower is better)
Translates to: HNISFFRLNKEM*QRLRWIRRKSF
Trigger: GAAACTTTTCCTTCTGATCCACCTGAGCCTCTGCCACATTTCCTTATTGAGCCTGAAGAAGCTTATATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000453304.6
ENST00000504962.1
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS TCA 72 bp GCCGAAGAGTCAATAATATCTGACTCAAAGTCACGATaGTTCTTCCGATACACAAACAAGGCCACAACTACA +
Preference number: 6 (lower is better)
Translates to: AEESIISDSKSR*FFRYTNKATTT
Trigger: TGTAGTTGTGGCCTTGTTTGTGTATCGGAAGAATCATCGTGACTTTGAGTCAGATATTATTGACTCTTCGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS TCA 72 bp AAAGCCCCCATTGAGTGCCGAAGAGTCAATAATATCTaGCTCAAAGTCACGATGATTCTTCCGATACACAAA +
Preference number: 6 (lower is better)
Translates to: KAPIECRRVNNI*LKVTMILPIHK
Trigger: TTTGTGTATCGGAAGAATCATCGTGACTTTGAGTCAGATATTATTGACTCTTCGGCACTCAATGGGGGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453304.6
ENST00000506749.5
ENST00000513796.5
ENST00000610318.4
CDS TCA 72 bp TGCTATCACAATCCCAACATAGAGAGCAACATCATCTaGATCAGGAGCAGAAGAAAATCCATATTCATTCTG +
Preference number: 6 (lower is better)
Translates to: CYHNPNIESNII*IRSRRKSIFIL
Trigger: CAGAATGAATATGGATTTTCTTCTGCTCCTGATTCAGATGATGTTGCTCTCTATGTTGGGATTGTGATAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506749.5
ENST00000513796.5