RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC5B (Homo sapiens)

Ensembl gene IDs: ENSG00000107731

Ensembl transcript IDs: ENST00000335350.10, ENST00000373192.4

Found 704 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCTGAGACGGGTCCCAGTGGCTGCTCGGAGACCTGCTGGGGCATaGCCTAGGGTCACTGCCTGGAGGTGTTGGGGAAGCGGGCACCTG +
Preference number: 1 (lower is better)
Translates to: VLRRVPVAARRPAGA*PRVTAWRCWGSGHL
Trigger: CAGGTGCCCGCTTCCCCAACACCTCCAGGCAGTGACCCTAGGGCATGCCCCAGCAGGTCTCCGAGCAGCCACTGGGACCCGTCTCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp GCCACTGCCAGGCAGCTGCACAGGGCAGGGACTCATCCCGTGCCATaGAGGGCCCCTCGAACAGGTTGGGTGGGGGTGGTATGTGCTGTC +
Preference number: 1 (lower is better)
Translates to: ATARQLHRAGTHPVP*RAPRTGWVGVVCAV
Trigger: GACAGCACATACCACCCCCACCCAACCTGTTCGAGGGGCCCTGCATGGCACGGGATGAGTCCCTGCCCTGTGCAGCTGCCTGGCAGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp TCCCAGCCACTGCCAGGCAGCTGCACAGGGCAGGGACTCATCCCGTaGCATGCAGGGCCCCTCGAACAGGTTGGGTGGGGGTGGTATGTG +
Preference number: 1 (lower is better)
Translates to: SQPLPGSCTGQGLIP*HAGPLEQVGWGWYV
Trigger: CACATACCACCCCCACCCAACCTGTTCGAGGGGCCCTGCATGGCACGGGATGAGTCCCTGCCCTGTGCAGCTGCCTGGCAGTGGCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp CGGAGACCTGCTGGGGCATGCCCTAGGGTCACTGCCTGGAGGTGTTaGGGAAGCGGGCACCTGCCTTGCCTGGAGTGCCAAGAGGGAGAG +
Preference number: 1 (lower is better)
Translates to: RRPAGACPRVTAWRC*GSGHLPCLECQEGE
Trigger: CTCTCCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGTGACCCTAGGGCATGCCCCAGCAGGTCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp GGTCCAGCCCTTTGCCCCACCAAGAGCTCCCTGCACCAAAGCTCCTaGTCACCTCCCCTAAGGGACCCGGCTCAGCTGCCTAGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: GPALCPTKSSLHQSS*SPPLRDPAQLPRSW
Trigger: CCAGCTCCTAGGCAGCTGAGCCGGGTCCCTTAGGGGAGGTGACCAGGAGCTTTGGTGCAGGGAGCTCTTGGTGGGGCAAAGGGCTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp GGGTCACTGCCTGGAGGTGTTGGGGAAGCGGGCACCTGCCTTGCCTaGAGTGCCAAGAGGGAGAGGCCTTTGAAGAGGCCTCTGTGCTGG +
Preference number: 1 (lower is better)
Translates to: GSLPGGVGEAGTCLA*SAKRERPLKRPLCW
Trigger: CCAGCACAGAGGCCTCTTCAAAGGCCTCTCCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTaGTCAGACTGCCCTCAAAGCCACGTGACCGAGGCCCACACGTGT +
Preference number: 1 (lower is better)
Translates to: CEGNGTPCHGTCGLA*SDCPQSHVTEAHTC
Trigger: ACACGTGTGGGCCTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp CCTAGGGTCACTGCCTGGAGGTGTTGGGGAAGCGGGCACCTGCCTTaGCTGGAGTGCCAAGAGGGAGAGGCCTTTGAAGAGGCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: PRVTAWRCWGSGHLP*LECQEGEAFEEASV
Trigger: CACAGAGGCCTCTTCAAAGGCCTCTCCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGTGACCCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp CTGCCCGCCCCCAACCAACTGCCTCCAGAGGCTTCAGCCCCATCTTaGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGG +
Preference number: 1 (lower is better)
Translates to: LPAPNQLPPEASAPS*FLHRDLRPRERERG
Trigger: CCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCAAGATGGGGCTGAAGCCTCTGGAGGCAGTTGGTTGGGGGCGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 90 bp GCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATATaGAGCACAGCCAGGCCACCCGCCTCCAAGGCTCCCACGTTGCAG +
Preference number: 1 (lower is better)
Translates to: AGKPASQPPSPLLGI*STARPPASKAPTLQ
Trigger: CTGCAACGTGGGAGCCTTGGAGGCGGGTGGCCTGGCTGTGCTTCATATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 90 bp CACGTGACCGAGGCCCACACGTGTTCATGGGCTAACAGTGACCAGTaGGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCAC +
Preference number: 1 (lower is better)
Translates to: HVTEAHTCSWANSDQ*GRAHGMGTLAGKAH
Trigger: GTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCACTGGTCACTGTTAGCCCATGAACACGTGTGGGCCTCGGTCACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp AATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACTaGCCTCAAAGCCACGTGACCGAGGCCCACACGTGTTCATGGGCT +
Preference number: 1 (lower is better)
Translates to: NGTPCHGTCGLAWSD*PQSHVTEAHTCSWA
Trigger: AGCCCATGAACACGTGTGGGCCTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp CGGGCATATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTaGCCCACCAAGAGCTCCCTGCACCAAAGCTCCTGGTCACCTCCC +
Preference number: 1 (lower is better)
Translates to: RAYNHVHRPGRGPAL*PTKSSLHQSSWSPP
Trigger: GGGAGGTGACCAGGAGCTTTGGTGCAGGGAGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTATATGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 90 bp AAGCGGGCACCTGCCTTGCCTGGAGTGCCAAGAGGGAGAGGCCTTTaGAGAGGCCTCTGTGCTGGCTGCAAGATCCTTGTCCCAGCCACT +
Preference number: 1 (lower is better)
Translates to: KRAPALPGVPRGRGL*RGLCAGCKILVPAT
Trigger: AGTGGCTGGGACAAGGATCTTGCAGCCAGCACAGAGGCCTCTTCAAAGGCCTCTCCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 90 bp CTGCCCTCCTCTCAGGATATCAGACTTTCAAAGGCCAGGATGTGCTaGGACGGGTCCCAGTGGCTGCTCGGAGACCTGCTGGGGCATGCC +
Preference number: 1 (lower is better)
Translates to: LPSSQDIRLSKARMC*DGSQWLLGDLLGHA
Trigger: GGCATGCCCCAGCAGGTCTCCGAGCAGCCACTGGGACCCGTCTCAGCACATCCTGGCCTTTGAAAGTCTGATATCCTGAGAGGAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 90 bp AGAGAGAAATACCTGCGTAAGGGCCCTGCAACCCCCAAGGGTACCTaGGCTGCTTCCCACCAGGTACATGCCCTCGGGGGCTACCTCTTG +
Preference number: 1 (lower is better)
Translates to: REKYLRKGPATPKGT*AASHQVHALGGYLL
Trigger: CAAGAGGTAGCCCCCGAGGGCATGTACCTGGTGGGAAGCAGCTCAGGTACCCTTGGGGGTTGCAGGGCCCTTACGCAGGTATTTCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp TCTTGGTCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTaGGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCC +
Preference number: 1 (lower is better)
Translates to: SWSLDCQATCGHIRA*EGNGTPCHGTCGLA
Trigger: GGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGACCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp CCCTGCAACCCCCAAGGGTACCTGAGCTGCTTCCCACCAGGTACATaGCCTCGGGGGCTACCTCTTGGGTCTGAATTGGAGGAGAAACCA +
Preference number: 1 (lower is better)
Translates to: PCNPQGYLSCFPPGT*PRGLPLGSELEEKP
Trigger: TGGTTTCTCCTCCAATTCAGACCCAAGAGGTAGCCCCCGAGGGCATGTACCTGGTGGGAAGCAGCTCAGGTACCCTTGGGGGTTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp AGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTaGGCATATGAAGCACAGCCAGGCCACCCGCCTCCAAGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: RSELGNQLLSLLLHS*AYEAQPGHPPPRLP
Trigger: TGGGAGCCTTGGAGGCGGGTGGCCTGGCTGTGCTTCATATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 90 bp CCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTCTaGGGCAGCATCCACATGGAGGCACCAGGGTCGAAAGCCTTAGTC +
Preference number: 1 (lower is better)
Translates to: PMGWALWQGRLTAFV*GSIHMEAPGSKALV
Trigger: GACTAAGGCTTTCGACCCTGGTGCCTCCATGTGGATGCTGCCTCAGACAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp GTTGGGTGGGGGTGGTATGTGCTGTCCCCTCAACCCTGGCAACCCTaGCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGG +
Preference number: 1 (lower is better)
Translates to: VGWGWYVLSPQPWQP*PLGKVISDLSDRSG
Trigger: CCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTGCCAGGGTTGAGGGGACAGCACATACCACCCCCACCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp GGAAGCCAGGCTGGGGACGCTGGCTGGAACTGCGGCCCTAAAACCTaGCCTCCTCTCAGGATATCAGACTTTCAAAGGCCAGGATGTGCT +
Preference number: 1 (lower is better)
Translates to: GSQAGDAGWNCGPKT*PPLRISDFQRPGCA
Trigger: AGCACATCCTGGCCTTTGAAAGTCTGATATCCTGAGAGGAGGGCAGGTTTTAGGGCCGCAGTTCCAGCCAGCGTCCCCAGCCTGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp CCAACTTTCTTAATCCAGATTCCCAGGAGTCCAGATGTATCTCCCTaGGGCTGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACT +
Preference number: 1 (lower is better)
Translates to: PTFLIQIPRSPDVSP*GCGREGPPTPALST
Trigger: AGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACAGCCCCAGGGAGATACATCTGGACTCCTGGGAATCTGGATTAAGAAAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp CACATTTCTGGAAGTCAGACTGGAAATGGCACCTGGGTGGCTGGCTaGACTTCATCCGTCAAGCTCCTGTCCTGGGGGCAGAGCAAGCAG +
Preference number: 1 (lower is better)
Translates to: HISGSQTGNGTWVAG*TSSVKLLSWGQSKQ
Trigger: CTGCTTGCTCTGCCCCCAGGACAGGAGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAAATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp GGTGCACATTTCTGGAAGTCAGACTGGAAATGGCACCTGGGTGGCTaGCTGCACTTCATCCGTCAAGCTCCTGTCCTGGGGGCAGAGCAA +
Preference number: 1 (lower is better)
Translates to: GAHFWKSDWKWHLGG*LHFIRQAPVLGAEQ
Trigger: TTGCTCTGCCCCCAGGACAGGAGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAAATGTGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp GTGGGTGAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTaGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATATG +
Preference number: 1 (lower is better)
Translates to: VGERRVIGGACGDQS*ETSFSASFSTPGHM
Trigger: CATATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp CTCGAACAGGTTGGGTGGGGGTGGTATGTGCTGTCCCCTCAACCCTaGCAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGAC +
Preference number: 1 (lower is better)
Translates to: LEQVGWGWYVLSPQP*QPCPLGKVISDLSD
Trigger: GTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTGCCAGGGTTGAGGGGACAGCACATACCACCCCCACCCAACCTGTTCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp ACATGGTGCACATTTCTGGAAGTCAGACTGGAAATGGCACCTGGGTaGCTGGCTGCACTTCATCCGTCAAGCTCCTGTCCTGGGGGCAGA +
Preference number: 1 (lower is better)
Translates to: TWCTFLEVRLEMAPG*LAALHPSSSCPGGR
Trigger: TCTGCCCCCAGGACAGGAGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAAATGTGCACCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp GGCTCCAGCCAATGGGTCTGTGCTCTAGGACATGGTGCACATTTCTaGAAGTCAGACTGGAAATGGCACCTGGGTGGCTGGCTGCACTTC +
Preference number: 1 (lower is better)
Translates to: GSSQWVCALGHGAHF*KSDWKWHLGGWLHF
Trigger: GAAGTGCAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAAATGTGCACCATGTCCTAGAGCACAGACCCATTGGCTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp TGTGCTCTAGGACATGGTGCACATTTCTGGAAGTCAGACTGGAAATaGCACCTGGGTGGCTGGCTGCACTTCATCCGTCAAGCTCCTGTC +
Preference number: 1 (lower is better)
Translates to: CALGHGAHFWKSDWK*HLGGWLHFIRQAPV
Trigger: GACAGGAGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAAATGTGCACCATGTCCTAGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp TGGGTCTGTGCTCTAGGACATGGTGCACATTTCTGGAAGTCAGACTaGAAATGGCACCTGGGTGGCTGGCTGCACTTCATCCGTCAAGCT +
Preference number: 1 (lower is better)
Translates to: WVCALGHGAHFWKSD*KWHLGGWLHFIRQA
Trigger: AGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAAATGTGCACCATGTCCTAGAGCACAGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp GCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGGTCTGTaGTCTAGGACATGGTGCACATTTCTGGAAGTCAGACTGGAAATG +
Preference number: 1 (lower is better)
Translates to: ADGLNPPRRLQPMGL*SRTWCTFLEVRLEM
Trigger: CATTTCCAGTCTGACTTCCAGAAATGTGCACCATGTCCTAGAGCACAGACCCATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTaGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTT +
Preference number: 1 (lower is better)
Translates to: WFLHRDLRPRERERG*RRNSGPSNNRVHGF
Trigger: AAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 90 bp ACGGCAGATCACAAGGTCCCCTACAGAAGCCTAGAACAGTGTGTCTaGACCCAAAGAGCCTCAGACCGCAGACTTCTAGGTATGAAAAGG +
Preference number: 1 (lower is better)
Translates to: TADHKVPYRSLEQCV*TQRASDRRLLGMKR
Trigger: CCTTTTCATACCTAGAAGTCTGCGGTCTGAGGCTCTTTGGGTTCAGACACACTGTTCTAGGCTTCTGTAGGGGACCTTGTGATCTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp GAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATaGATTCAGCATCTGCTTAAGATTTTAGAGGAAAATCTAACCAGC +
Preference number: 1 (lower is better)
Translates to: EGGPTHSSPQHSLAL*IQHLLKILEENLTS
Trigger: GCTGGTTAGATTTTCCTCTAAAATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp CCACCAGACCAAAACCAGACTGGAACATTCTCCCTGGCTCACAACTaGCCTGAGCAGTCCTCCTCTTTCATCCCAACTTTCTTAATCCAG +
Preference number: 1 (lower is better)
Translates to: PPDQNQTGTFSLAHN*PEQSSSFIPTFLIQ
Trigger: CTGGATTAAGAAAGTTGGGATGAAAGAGGAGGACTGCTCAGGCCAGTTGTGAGCCAGGGAGAATGTTCCAGTCTGGTTTTGGTCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp GACTTCTCAGCCATCACTCTGCTTTACAGAAGGAGAAACCAAGGTTaGGGAAGGGCAGATTCTGGATTCCTGGCCATCAAGAGAGCACCA +
Preference number: 1 (lower is better)
Translates to: DFSAITLLYRRRNQG*GRADSGFLAIKRAP
Trigger: TGGTGCTCTCTTGATGGCCAGGAATCCAGAATCTGCCCTTCCCCAACCTTGGTTTCTCCTTCTGTAAAGCAGAGTGATGGCTGAGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 90 bp AGCAGTTTAATGGCAGATTTGCAAGTTGATTCTTGGTCTTTGGACTaGCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGC +
Preference number: 1 (lower is better)
Translates to: SSLMADLQVDSWSLD*QATCGHIRACEGNG
Trigger: GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGACCAAGAATCAACTTGCAAATCTGCCATTAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 90 bp ACTAGCGGTCTGAAGCTTTCTTTCTTTCCTTTGCCTTTTTGCTTTTaGACAGGAGAAAGCAGTTTGTCTGAATTGTACTTGACTCTTCAA +
Preference number: 1 (lower is better)
Translates to: TSGLKLSFFPLPFCF*TGESSLSELYLTLQ
Trigger: TTGAAGAGTCAAGTACAATTCAGACAAACTGCTTTCTCCTGTCCAAAAGCAAAAAGGCAAAGGAAAGAAAGAAAGCTTCAGACCGCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGGAGGGAGGGCCTCCTaGCTGCCCGCCCCCAACCAA +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPGGRAS*LPAPNQ
Trigger: TTGGTTGGGGGCGGGCAGGCAGGAGGCCCTCCCTCC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGGGAGGGCCTCCTGCCTaGCCGCCCCCAACCAACTGC +
Preference number: 2 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLGGPPA*PPPTNC
Trigger: GCAGTTGGTTGGGGGCGGGCAGGCAGGAGGCCCTCC...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGCAGGGAAGCCAGGCTaGGGACGCTGGCTGGAACTG +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPAGKPG*GRWLEL
Trigger: CAGTTCCAGCCAGCGTCCCCAGCCTGGCTTCCCTGC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGCACCCCAGCGGGGCTaGTGGGTGGTAAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDAPQRG*WVVRSP
Trigger: GGGGCTTCTTACCACCCACCAGCCCCGCTGGGGTGC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCCGCCCCCAACCAACTaGCTCCAGAGGCTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDPPPTN*LQRLQP
Trigger: GGGCTGAAGCCTCTGGAGGCAGTTGGTTGGGGGCGG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGGGAGGGAGGGCCTCCTaGCTGCCCGCCCCCAACCAA +
Preference number: 2 (lower is better)
Translates to: DSWPSREHHAALEAAGLRGGRAS*LPAPNQ
Trigger: TTGGTTGGGGGCGGGCAGGCAGGAGGCCCTCCCTCC...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGGTGGGGGTGGTATGTaGTGTCCCCTCAACCCTGGC +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPGGGGM*CPLNPG
Trigger: GCCAGGGTTGAGGGGACAGCACATACCACCCCCACC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGGGGAAGCGGGCACCTaGCTTGCCTGGAGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDGEAGT*LAWSAK
Trigger: CTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCAGACCTGCTGGGGCATaGCCTAGGGTCACTGCCTGG +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPRPAGA*PRVTAW
Trigger: CCAGGCAGTGACCCTAGGGCATGCCCCAGCAGGTCT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCAGGCAAGTCCTCCTTTaGCCACAGCCAGGCCGCACC +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPRQVLL*PQPGRT
Trigger: GGTGCGGCCTGGCTGTGGGCAAAGGAGGACTTGCCT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGTGCCCCAGGCCTCCCTaGACCTGCCTCCTGCCAGTC +
Preference number: 2 (lower is better)
Translates to: LDSWPSREHHAALEAAGLCPRPP*TCLLPV
Trigger: GACTGGCAGGAGGCAGGTGCAGGGAGGCCTGGGGCA...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCCGCCAGGAGAGAGATaGCCGTGGAGGACTCCCCTC +
Preference number: 2 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEPPGER*PWRTPL
Trigger: GAGGGGAGTCCTCCACGGGCATCTCTCTCCTGGCGG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCAGGGACTCATCCCGTaGCATGCAGGGCCCCTCGAA +
Preference number: 2 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDQGLIP*HAGPLE
Trigger: TTCGAGGGGCCCTGCATGGCACGGGATGAGTCCCTG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CAA 90 bp CCTGCCCGCCCCCAACCAACTGCCTCCAGAGGCTTCAGCCCCATCTaGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGG +
Preference number: 2 (lower is better)
Translates to: PARPQPTASRGFSPI*VPAQRSQAKRERAG
Trigger: CCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCAAGATGGGGCTGAAGCCTCTGGAGGCAGTTGGTTGGGGGCGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGAGGCAAGTCCTCCTTTaGCCACAGCCAGGCCGCACC +
Preference number: 2 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTERQVLL*PQPGRT
Trigger: GGTGCGGCCTGGCTGTGGGCAAAGGAGGACTTGCCT...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCTCCCTGGCTCACAACTaGCCTGAGCAGTCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPSLAHN*PEQSSS
Trigger: AGAGGAGGACTGCTCAGGCCAGTTGTGAGCCAGGGA...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGGCTGGGGACGCTGGCTaGAACTGCGGCCCTAAAACC +
Preference number: 2 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEAGDAG*NCGPKT
Trigger: GGTTTTAGGGCCGCAGTTCCAGCCAGCGTCCCCAGC...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGGCCGAGCCCATGGGATaGGCACTTTGGCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEAEPMG*ALWQGR
Trigger: CCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGC...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CAA 90 bp GAAGCGGGCACCTGCCTTGCCTGGAGTGCCAAGAGGGAGAGGCCTTaGAAGAGGCCTCTGTGCTGGCTGCAAGATCCTTGTCCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: EAGTCLAWSAKRERP*KRPLCWLQDPCPSH
Trigger: GTGGCTGGGACAAGGATCTTGCAGCCAGCACAGAGGCCTCTTCAAAGGCCTCTCCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGGCTCACAACTGGCCTaGGCAGTCCTCCTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPGSQLA*AVLLFH
Trigger: ATGAAAGAGGAGGACTGCTCAGGCCAGTTGTGAGCC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCATGCCCCAGGCCTCCCTaGACCTGCCTCCTGCCAGTC +
Preference number: 2 (lower is better)
Translates to: THAPQRGEREKYLRKGPACPRPP*TCLLPV
Trigger: GACTGGCAGGAGGCAGGTGCAGGGAGGCCTGGGGCA...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGGGCCTCTGTGCTGGCTaGAAGATCCTTGTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEGLCAG*KILVPA
Trigger: GGCTGGGACAAGGATCTTGCAGCCAGCACAGAGGCC...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGGGCACATTAGAGCCTaGGAGGGGAATGGCACCCCC +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRGHIRA*EGNGTP
Trigger: GGGGGTGCCATTCCCCTCGCAGGCTCTAATGTGCCC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGGAGAGAGAGCGGGGGTaGAGAAGGAACTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: DSWPSREHHAALEAAGLRERERG*RRNSGP
Trigger: GGGCCCAGAGTTCCTTCTCCACCCCCGCTCTCTCTC...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGCCAGATGTATCTCCCTaGGGCTGTGGGAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: DSWPSREHHAALEAAGLRPDVSP*GCGREG
Trigger: GCCCTCCCTCCCACAGCCCCAGGGAGATACATCTGG...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCTCGAACAGGTTGGGTaGGGGTGGTATGTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDLEQVG*GWYVLS
Trigger: GGACAGCACATACCACCCCCACCCAACCTGTTCGAG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCACTGCCTGGAGGTGTTaGGGAAGCGGGCACCTGCCT +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRTAWRC*GSGHLP
Trigger: AGGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGT...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGTCCTGGCCAGAAGTGTaGGCGTGCCCATTCTCATCC +
Preference number: 2 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTESWPEV*ACPFSS
Trigger: GGATGAGAATGGGCACGCTCACACTTCTGGCCAGGA...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCCCACGTTGCAGAGCTaGCTGACACCGGGAAGCTCA +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRPTLQS*LTPGSS
Trigger: TGAGCTTCCCGGTGTCAGTCAGCTCTGCAACGTGGG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTAGCCCCACGAGCTACTaGGTCCATGGCAGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRASPTSY*VHGREA
Trigger: GGCTTCCCTGCCATGGACTCAGTAGCTCGTGGGGCT...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGGAGGGTCCAGGAGATaGGAAGGATCCCCTGCACCC +
Preference number: 2 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAGGSRR*EGSPAP
Trigger: GGGTGCAGGGGATCCTTCTCATCTCCTGGACCCTCC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCACTCATCCCGTGCCATaGAGGGCCCCTCGAACAGGT +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRTHPVP*RAPRTG
Trigger: ACCTGTTCGAGGGGCCCTGCATGGCACGGGATGAGT...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCGGGGAAGCGGGCACCTaGCTTGCCTGGAGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: SLDCQATCGHIRACEGNGGEAGT*LAWSAK
Trigger: CTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCC...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCTGCGGCCCTAAAACCTaGCCTCCTCTCAGGATATCA +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPCGPKT*PPLRIS
Trigger: TGATATCCTGAGAGGAGGGCAGGTTTTAGGGCCGCA...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTCCCTGGCTCACAACTaGCCTGAGCAGTCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLSLAHN*PEQSSS
Trigger: AGAGGAGGACTGCTCAGGCCAGTTGTGAGCCAGGGA...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGCCGAGCCCATGGGATaGGCACTTTGGCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAAEPMG*ALWQGR
Trigger: CCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAAGCCCCACGAGCTACTaGGTCCATGGCAGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTSPTSY*VHGREA
Trigger: GGCTTCCCTGCCATGGACTCAGTAGCTCGTGGGGCT...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCAGGGACTCATCCCGTaGCATGCAGGGCCCCTCGAA +
Preference number: 2 (lower is better)
Translates to: SLDCQATCGHIRACEGNGQGLIP*HAGPLE
Trigger: TTCGAGGGGCCCTGCATGGCACGGGATGAGTCCCTG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACTGCGGCCCTAAAACCTaGCCTCCTCTCAGGATATCA +
Preference number: 2 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDCGPKT*PPLRIS
Trigger: TGATATCCTGAGAGGAGGGCAGGTTTTAGGGCCGCA...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACCAGATGTATCTCCCTaGGGCTGTGGGAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTPDVSP*GCGREG
Trigger: GCCCTCCCTCCCACAGCCCCAGGGAGATACATCTGG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCTTTGAGTCCCACTTCTaGGCCACATCCCTTTCTAGG +
Preference number: 2 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPFESHF*ATSLSR
Trigger: CCTAGAAAGGGATGTGGCCCAGAAGTGGGACTCAAA...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCACTGCCTGGAGGTGTTaGGGAAGCGGGCACCTGCCT +
Preference number: 2 (lower is better)
Translates to: SLDCQATCGHIRACEGNGTAWRC*GSGHLP
Trigger: AGGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGT...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGGGACCAGAGTGCCCTaGAGGGTCCAGGAGATGAGA +
Preference number: 2 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAGTRVP*RVQEMR
Trigger: TCTCATCTCCTGGACCCTCCAGGGCACTCTGGTCCC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCTTCATCTCTCTGTTTaGGTCCCACTTCTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTELHLSV*VPLLGH
Trigger: GTGGCCCAGAAGTGGGACTCAAACAGAGAGATGAAG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGCCACTCCTGGGCATATaGAGCACAGCCAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEPLLGI*STARPP
Trigger: GGGTGGCCTGGCTGTGCTTCATATGCCCAGGAGTGG...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAACCCCCAAGGGTACCTaGGCTGCTTCCCACCAGGTA +
Preference number: 2 (lower is better)
Translates to: THAPQRGEREKYLRKGPATPKGT*AASHQV
Trigger: TACCTGGTGGGAAGCAGCTCAGGTACCCTTGGGGGT...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTACGGGTCCCAGTGGCTaGTCGGAGACCTGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: QTDGVGKAFLGISHRADGTGPSG*SETCWG
Trigger: GCCCCAGCAGGTCTCCGAGCAGCCACTGGGACCCGT...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCAAGGGTACCTGAGCTaGTTCCCACCAGGTACATGC +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRQGYLS*FPPGTC
Trigger: GCATGTACCTGGTGGGAAGCAGCTCAGGTACCCTTG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGCACCCCAGCGGGGCTaGTGGGTGGTAAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: QTDGVGKAFLGISHRADGAPQRG*WVVRSP
Trigger: GGGGCTTCTTACCACCCACCAGCCCCGCTGGGGTGC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGAGGCAGCATCCACATaGAGGCACCAGGGTCGAAAG +
Preference number: 2 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAEAAST*RHQGRK
Trigger: CTTTCGACCCTGGTGCCTCCATGTGGATGCTGCCTC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCTGTCACGGCACGTGTaGTCTAGCCTGGTCAGACTG +
Preference number: 2 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRALSRHV*SSLVRL
Trigger: CAGTCTGACCAGGCTAGACCACACGTGCCGTGACAG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGGAGGCTCCAGCCAATaGGTCTGTGCTCTAGGACAT +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRGGSSQ*VCALGH
Trigger: ATGTCCTAGAGCACAGACCCATTGGCTGGAGCCTCC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACATCCTGGCCAGAAGTGTaGGCGTGCCCATTCTCATCC +
Preference number: 2 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTSWPEV*ACPFSS
Trigger: GGATGAGAATGGGCACGCTCACACTTCTGGCCAGGA...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCTTCATCTCTCTGTTTaGGTCCCACTTCTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRLHLSV*VPLLGH
Trigger: GTGGCCCAGAAGTGGGACTCAAACAGAGAGATGAAG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGCCGCCCCCAACCAACTaGCTCCAGAGGCTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGPPPTN*LQRLQP
Trigger: GGGCTGAAGCCTCTGGAGGCAGTTGGTTGGGGGCGG...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCAACCCTGGCAACCCTaGCCACTGGGAAAGGTTATT +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRQPWQP*PLGKVI
Trigger: AATAACCTTTCCCAGTGGGCAGGGTTGCCAGGGTTG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGAGAGAGAGCGGGGGTaGAGAAGGAACTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: GISHRADGLNPPRRLQPMERERG*RRNSGP
Trigger: GGGCCCAGAGTTCCTTCTCCACCCCCGCTCTCTCTC...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGGAGAGAGATGCCCGTaGAGGACTCCCCTCCCCTAC +
Preference number: 2 (lower is better)
Translates to: GISHRADGLNPPRRLQPMGERCP*RTPLPY
Trigger: GTAGGGGAGGGGAGTCCTCCACGGGCATCTCTCTCC...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTACGTGTGGTCTAGCCTaGTCAGACTGCCCTCAAAGC +
Preference number: 2 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRATCGLA*SDCPQS
Trigger: GCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGT...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAGGCTCACAACTGGCCTaGGCAGTCCTCCTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: THAPQRGEREKYLRKGPAGSQLA*AVLLFH
Trigger: ATGAAAGAGGAGGACTGCTCAGGCCAGTTGTGAGCC...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTCCACTCCTGGGCATATaGAGCACAGCCAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: QTDGVGKAFLGISHRADGPLLGI*STARPP
Trigger: GGGTGGCCTGGCTGTGCTTCATATGCCCAGGAGTGG...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCTCACTGCCTTTGTCTaGGGCAGCATCCACATGGAG +
Preference number: 2 (lower is better)
Translates to: SLDCQATCGHIRACEGNGLTAFV*GSIHME
Trigger: CTCCATGTGGATGCTGCCTCAGACAAAGGCAGTGAG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGCTAACAGTGACCAGTaGGGCCGAGCCCATGGGATG +
Preference number: 2 (lower is better)
Translates to: GISHRADGLNPPRRLQPMANSDQ*GRAHGM
Trigger: CATCCCATGGGCTCGGCCTCACTGGTCACTGTTAGC...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGGCCTCTGTGCTGGCTaGAAGATCCTTGTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GISHRADGLNPPRRLQPMGLCAG*KILVPA
Trigger: GGCTGGGACAAGGATCTTGCAGCCAGCACAGAGGCC...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGCCCTCAGCACTCCTTaGCTTTATGGATTCAGCATC +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRALSTP*LYGFSI
Trigger: GATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGTTTGAGTCCCACTTCTaGGCCACATCCCTTTCTAGG +
Preference number: 2 (lower is better)
Translates to: DSWPSREHHAALEAAGLRFESHF*ATSLSR
Trigger: CCTAGAAAGGGATGTGGCCCAGAAGTGGGACTCAAA...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAAAGAGGCCTCTGTGCTaGCTGCAAGATCCTTGTCCC +
Preference number: 2 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTKRPLC*LQDPCP
Trigger: GGGACAAGGATCTTGCAGCCAGCACAGAGGCCTCTT...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTCGTTGCAGAGCTGACTaGCACCGGGAAGCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: QTDGVGKAFLGISHRADGRCRAD*HREAQA
Trigger: AGCCTGAGCTTCCCGGTGTCAGTCAGCTCTGCAACG...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGCTAACAGTGACCAGTaGGGCCGAGCCCATGGGATG +
Preference number: 2 (lower is better)
Translates to: QTDGVGKAFLGISHRADGANSDQ*GRAHGM
Trigger: CATCCCATGGGCTCGGCCTCACTGGTCACTGTTAGC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCTAGCCTGGTCAGACTaGCCTCAAAGCCACGTGACC +
Preference number: 2 (lower is better)
Translates to: GISHRADGLNPPRRLQPMLAWSD*PQSHVT
Trigger: GGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAGGGAAGGGCAGATTCTaGATTCCTGGCCATCAAGAG +
Preference number: 2 (lower is better)
Translates to: THAPQRGEREKYLRKGPAGKGRF*IPGHQE
Trigger: CTCTTGATGGCCAGGAATCCAGAATCTGCCCTTCCC...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCTGTCCCCTCAACCCTaGCAACCCTGCCCACTGGGA +
Preference number: 2 (lower is better)
Translates to: SPEKAVICLKSHSSLMADLSPQP*QPCPLG
Trigger: TCCCAGTGGGCAGGGTTGCCAGGGTTGAGGGGACAG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCAGGTTGGGTGGGGGTaGTATGTGCTGTCCCCTCAA +
Preference number: 2 (lower is better)
Translates to: GISHRADGLNPPRRLQPMQVGWG*YVLSPQ
Trigger: TTGAGGGGACAGCACATACCACCCCCACCCAACCTG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGTGAGGCCGAGCCCATaGGATGGGCACTTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: SPEKAVICLKSHSSLMADVRPSP*DGHFGR
Trigger: CCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGGCTAAATCTAGACAGTaGAAACCCTGTCTGACCTAC +
Preference number: 2 (lower is better)
Translates to: LDSWPSREHHAALEAAGLAKSRQ*KPCLTY
Trigger: GTAGGTCAGACAGGGTTTTCACTGTCTAGATTTAGC...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCGTTGCAGAGCTGACTaGCACCGGGAAGCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: SPEKAVICLKSHSSLMADRCRAD*HREAQA
Trigger: AGCCTGAGCTTCCCGGTGTCAGTCAGCTCTGCAACG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGACCTGGGTGGCTGGCTaGACTTCATCCGTCAAGCTC +
Preference number: 2 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGTWVAG*TSSVKL
Trigger: GAGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGT...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACAGATTCTGGATTCCTaGCCATCAAGAGAGCACCAC +
Preference number: 2 (lower is better)
Translates to: THAPQRGEREKYLRKGPAQILDS*PSREHH
Trigger: GTGGTGCTCTCTTGATGGCCAGGAATCCAGAATCTG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGAAGAGGCCTCTGTGCTaGCTGCAAGATCCTTGTCCC +
Preference number: 2 (lower is better)
Translates to: GISHRADGLNPPRRLQPMKRPLC*LQDPCP
Trigger: GGGACAAGGATCTTGCAGCCAGCACAGAGGCCTCTT...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGAGGCAGCATCCACATaGAGGCACCAGGGTCGAAAG +
Preference number: 2 (lower is better)
Translates to: QTDGVGKAFLGISHRADGEAAST*RHQGRK
Trigger: CTTTCGACCCTGGTGCCTCCATGTGGATGCTGCCTC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTCTGTCACGGCACGTGTaGTCTAGCCTGGTCAGACTG +
Preference number: 2 (lower is better)
Translates to: QTDGVGKAFLGISHRADGLSRHV*SSLVRL
Trigger: CAGTCTGACCAGGCTAGACCACACGTGCCGTGACAG...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGGTCAAGCTCCTGTCCTaGGGGCAGAGCAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGVKLLS*GQSKQL
Trigger: AAGCTGCTTGCTCTGCCCCCAGGACAGGAGCTTGAC...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CAA 90 bp GGGCTGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTaGGCTTTATGGATTCAGCATCTGCTTAAGATTTTAGAGGAAAAT +
Preference number: 2 (lower is better)
Translates to: GLWEGGPTHSSPQHS*ALWIQHLLKILEEN
Trigger: ATTTTCCTCTAAAATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCAGTGAAAACCCTGTCTaGCCTACTCCCTGCACAACT +
Preference number: 2 (lower is better)
Translates to: ERRVIGGACGDQSWETSFSENPV*PTPCTT
Trigger: AGTTGTGCAGGGAGTAGGTCAGACAGGGTTTTCACT...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGCTCACTGCCTTTGTCTaGGGCAGCATCCACATGGAG +
Preference number: 2 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGLTAFV*GSIHME
Trigger: CTCCATGTGGATGCTGCCTCAGACAAAGGCAGTGAG...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTTTCCTTTGCCTTTTTaGTTTTGGACAGGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLFPLPF*FWTGES
Trigger: GCTTTCTCCTGTCCAAAAGCAAAAAGGCAAAGGAAA...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGAGGGTTATAGGAGGTaGCTGTGGAGATCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: GISHRADGLNPPRRLQPMEGYRR*LWRSEL
Trigger: CAGCTCTGATCTCCACAGGCACCTCCTATAACCCTC...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCACTCCTTGGCTTTATaGATTCAGCATCTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRHSLAL*IQHLLK
Trigger: CTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCATCGGCAAAGCCTTTCTaGGCATTTCTCATAGAGCTG +
Preference number: 2 (lower is better)
Translates to: THAPQRGEREKYLRKGPASAKPF*AFLIEL
Trigger: CAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGA...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAAGAAAGCAGTTTGTCTaGATTGTACTTGACTCTTCA +
Preference number: 2 (lower is better)
Translates to: CGREGPPTPALSTPWLYGRKQFV*IVLDSS
Trigger: TGAAGAGTCAAGTACAATTCAGACAAACTGCTTTCT...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGAGAAAGCAGTTTGTCTaGATTGTACTTGACTCTTCA +
Preference number: 2 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLRKQFV*IVLDSS
Trigger: TGAAGAGTCAAGTACAATTCAGACAAACTGCTTTCT...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGTCTCTCTCTCCTCAATaGACACGCGTACATGTACAC +
Preference number: 2 (lower is better)
Translates to: CPLGKVISDLSDRSGVGESLSPQ*TRVHVH
Trigger: GTGTACATGTACGCGTGTGCATTGAGGAGAGAGAGA...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGCAGGGAAGGCTCACTaGCTTTGTCTGAGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: SPEKAVICLKSHSSLMADAGKAH*LCLRQH
Trigger: ATGCTGCCTCAGACAAAGGCAGTGAGCCTTCCCTGC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACATGGTGCACATTTCTaGAAGTCAGACTGGAAATGG +
Preference number: 2 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTHGAHF*KSDWKW
Trigger: CCATTTCCAGTCTGACTTCCAGAAATGTGCACCATG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CAA 90 bp TCGCACAGCAGTTTAATGGCAGATTTGCAAGTTGATTCTTGGTCTTaGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGG +
Preference number: 2 (lower is better)
Translates to: SHSSLMADLQVDSWS*DCQATCGHIRACEG
Trigger: CCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGACCAAGAATCAACTTGCAAATCTGCCATTAAACTGCTGTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAGCCTTACTAGCGGTCTaGAGCTTTCTTTCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIALLAV*SFLSFL
Trigger: AAGGAAAGAAAGAAAGCTTCAGACCGCTAGTAAGGC...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR GCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCTCTCAGCCATCACTCTaGTTTACAGAAGGAGAAACC +
Preference number: 2 (lower is better)
Translates to: ERRVIGGACGDQSWETSFSQPSL*FTEGET
Trigger: GGTTTCTCCTTCTGTAAAGCAGAGTGATGGCTGAGA...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACACTCCTTGGCTTTATaGATTCAGCATCTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTHSLAL*IQHLLK
Trigger: CTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATTGTGGAGATCAGAGCTaGGAAACCAGCTTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: SPEKAVICLKSHSSLMADCGDQS*ETSFSA
Trigger: GGCTGAGAAGCTGGTTTCCCAGCTCTGATCTCCACA...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR TCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTGCTAAATCTAGACAGTaGAAACCCTGTCTGACCTAC +
Preference number: 2 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIAKSRQ*KPCLTY
Trigger: GTAGGTCAGACAGGGTTTTCACTGTCTAGATTTAGC...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp CTGCCAGGCAGCTGCACAGGGCAGGGACTCATCCCGTaGCATGCAGGGCCCCTCGAACAGGTTGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: LPGSCTGQGLIP*HAGPLEQVGWG
Trigger: CCCCCACCCAACCTGTTCGAGGGGCCCTGCATGGCACGGGATGAGTCCCTGCCCTGTGCAGCTGCCTGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp CGGGTCCCAGTGGCTGCTCGGAGACCTGCTGGGGCATaGCCTAGGGTCACTGCCTGGAGGTGTTGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: RVPVAARRPAGA*PRVTAWRCWGS
Trigger: GCTTCCCCAACACCTCCAGGCAGTGACCCTAGGGCATGCCCCAGCAGGTCTCCGAGCAGCCACTGGGACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp AGGCAGCTGCACAGGGCAGGGACTCATCCCGTGCCATaGAGGGCCCCTCGAACAGGTTGGGTGGGGGTGGTA +
Preference number: 3 (lower is better)
Translates to: RQLHRAGTHPVP*RAPRTGWVGVV
Trigger: TACCACCCCCACCCAACCTGTTCGAGGGGCCCTGCATGGCACGGGATGAGTCCCTGCCCTGTGCAGCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp GCTGGGGCATGCCCTAGGGTCACTGCCTGGAGGTGTTaGGGAAGCGGGCACCTGCCTTGCCTGGAGTGCCAA +
Preference number: 3 (lower is better)
Translates to: AGACPRVTAWRC*GSGHLPCLECQ
Trigger: TTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGTGACCCTAGGGCATGCCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp CCTCCCCTAAGGGACCCGGCTCAGCTGCCTAGGAGCTaGGGAATAGGGACCAGAGTGCCCTGGAGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: PPLRDPAQLPRS*GIGTRVPWRVQ
Trigger: CTGGACCCTCCAGGGCACTCTGGTCCCTATTCCCCAGCTCCTAGGCAGCTGAGCCGGGTCCCTTAGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 72 bp TACCTGCGTAAGGGCCCTGCAACCCCCAAGGGTACCTaGGCTGCTTCCCACCAGGTACATGCCCTCGGGGGC +
Preference number: 3 (lower is better)
Translates to: YLRKGPATPKGT*AASHQVHALGG
Trigger: GCCCCCGAGGGCATGTACCTGGTGGGAAGCAGCTCAGGTACCCTTGGGGGTTGCAGGGCCCTTACGCAGGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp GCTGCAAGATCCTTGTCCCAGCCACTGCCAGGCAGCTaGACAGGGCAGGGACTCATCCCGTGCCATGCAGGG +
Preference number: 3 (lower is better)
Translates to: AARSLSQPLPGS*TGQGLIPCHAG
Trigger: CCCTGCATGGCACGGGATGAGTCCCTGCCCTGTGCAGCTGCCTGGCAGTGGCTGGGACAAGGATCTTGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCTGGCTGCAAGATCCTaGTCCCAGCCACTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDLAARS*SQPLPG
Trigger: GCCTGGCAGTGGCTGGGACAAGGATCTTGCAGCCAG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGCAGGCAAGTCCTCCTTaGCCCACAGCCAGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLQASPP*PTARPH
Trigger: GTGCGGCCTGGCTGTGGGCAAAGGAGGACTTGCCTG...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 72 bp CCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATATaGAGCACAGCCAGGCCACCCGCCTCCAAGGCTCCC +
Preference number: 3 (lower is better)
Translates to: PASQPPSPLLGI*STARPPASKAP
Trigger: GGGAGCCTTGGAGGCGGGTGGCCTGGCTGTGCTTCATATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp CCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACTaGCCTCAAAGCCACGTGACCGAGGCCCACACGTGT +
Preference number: 3 (lower is better)
Translates to: PCHGTCGLAWSD*PQSHVTEAHTC
Trigger: ACACGTGTGGGCCTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTGACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp GGAGCACACACACACGCTCGCTCAGGTGGGGACACGTaGACATGCTCTCCGAGGGGCATCCTGATGTGCCCA +
Preference number: 3 (lower is better)
Translates to: GAHTHARSGGDT*TCSPRGILMCP
Trigger: TGGGCACATCAGGATGCCCCTCGGAGAGCATGTGCACGTGTCCCCACCTGAGCGAGCGTGTGTGTGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp CCTGGAGGTGTTGGGGAAGCGGGCACCTGCCTTGCCTaGAGTGCCAAGAGGGAGAGGCCTTTGAAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: PGGVGEAGTCLA*SAKRERPLKRP
Trigger: AGGCCTCTTCAAAGGCCTCTCCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCCAACACCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp AATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTaGTCAGACTGCCCTCAAAGCCACGTGACCGAGGCC +
Preference number: 3 (lower is better)
Translates to: NGTPCHGTCGLA*SDCPQSHVTEA
Trigger: GGCCTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp CTGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTaGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGT +
Preference number: 3 (lower is better)
Translates to: LRGEWHPLSRHV*SSLVRLPSKPR
Trigger: ACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACACTGCCTGGAGGTGTaGGGGAAGCGGGCACCTGCC +
Preference number: 3 (lower is better)
Translates to: THAPQRGEREKYLRKGPAHCLEV*GKRAPA
Trigger: GGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGTG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 72 bp GAGGCCCACACGTGTTCATGGGCTAACAGTGACCAGTaGGGCCGAGCCCATGGGATGGGCACTTTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: EAHTCSWANSDQ*GRAHGMGTLAG
Trigger: CCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCACTGGTCACTGTTAGCCCATGAACACGTGTGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp CACACACACGCTCGCTCAGGTGGGGACACGTGCACATaGTCTCCGAGGGGCATCCTGATGTGCCCACAGAGA +
Preference number: 3 (lower is better)
Translates to: HTHARSGGDTCT*SPRGILMCPQR
Trigger: TCTCTGTGGGCACATCAGGATGCCCCTCGGAGAGCATGTGCACGTGTCCCCACCTGAGCGAGCGTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp AACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTaGCCCACCAAGAGCTCCCTGCACCAAAGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: NHVHRPGRGPAL*PTKSSLHQSSW
Trigger: CCAGGAGCTTTGGTGCAGGGAGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp CTGCCTAGGAGCTGGGGAATAGGGACCAGAGTGCCCTaGAGGGTCCAGGAGATGAGAAGGATCCCCTGCACC +
Preference number: 3 (lower is better)
Translates to: LPRSWGIGTRVP*RVQEMRRIPCT
Trigger: GGTGCAGGGGATCCTTCTCATCTCCTGGACCCTCCAGGGCACTCTGGTCCCTATTCCCCAGCTCCTAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCAAGCGGGCACCTGCCTaGCCTGGAGTGCCAAGAGGG +
Preference number: 3 (lower is better)
Translates to: SLDCQATCGHIRACEGNGKRAPA*PGVPRG
Trigger: CCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTT...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp GCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTaGCTTTGTCTGAGGCAGCATCCACATGGAGGCACC +
Preference number: 3 (lower is better)
Translates to: AHGMGTLAGKAH*LCLRQHPHGGT
Trigger: GGTGCCTCCATGTGGATGCTGCCTCAGACAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp TTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTaGGAGGGGAATGGCACCCCCTGTCACGGCACGTGT +
Preference number: 3 (lower is better)
Translates to: LDCQATCGHIRA*EGNGTPCHGTC
Trigger: ACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp GGAAGTCAGACTGGAAATGGCACCTGGGTGGCTGGCTaGACTTCATCCGTCAAGCTCCTGTCCTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: GSQTGNGTWVAG*TSSVKLLSWGQ
Trigger: CTGCCCCCAGGACAGGAGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp CCCCAAGGGTACCTGAGCTGCTTCCCACCAGGTACATaGCCTCGGGGGCTACCTCTTGGGTCTGAATTGGAG +
Preference number: 3 (lower is better)
Translates to: PQGYLSCFPPGT*PRGLPLGSELE
Trigger: CTCCAATTCAGACCCAAGAGGTAGCCCCCGAGGGCATGTACCTGGTGGGAAGCAGCTCAGGTACCCTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp CACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTaGGTAAGGGCCCTGCAACCCCCAAGGGTACCTGAG +
Preference number: 3 (lower is better)
Translates to: HTHPREERERNT*VRALQPPRVPE
Trigger: CTCAGGTACCCTTGGGGGTTGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACATGGGATGGGCACTTaGGCAGGGAAGGCTCACTGC +
Preference number: 3 (lower is better)
Translates to: THAPQRGEREKYLRKGPAHGMGT*AGKAHC
Trigger: GCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGAGCCCTCAGCACTCCTaGGCTTTATGGATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTESPQHS*ALWIQH
Trigger: ATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCT...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAAAGAGGGAGAGGCCTTaGAAGAGGCCTCTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTKRERP*KRPLCW
Trigger: CCAGCACAGAGGCCTCTTCAAAGGCCTCTCCCTCTT...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 72 bp TGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTCTaGGGCAGCATCCACATGGAGGCACCAGGGTCGAAA +
Preference number: 3 (lower is better)
Translates to: WALWQGRLTAFV*GSIHMEAPGSK
Trigger: TTTCGACCCTGGTGCCTCCATGTGGATGCTGCCTCAGACAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp AGAAGACAGGCACACCAAACCCTAGACGTCCAAACCTaGGACGCAGAGGAGCACACACACACGCTCGCTCAG +
Preference number: 3 (lower is better)
Translates to: RRQAHQTLDVQT*DAEEHTHTLAQ
Trigger: CTGAGCGAGCGTGTGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGGGGGAAACTGAGGCCTaGTCAGAATTTAGTCCAAGA +
Preference number: 3 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLGETEA*SEFSPR
Trigger: TCTTGGACTAAATTCTGACAAGGCCTCAGTTTCCCC...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCAGGCAAGTCCTCCTTaGCCCACAGCCAGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: SPEKAVICLKSHSSLMADQASPP*PTARPH
Trigger: GTGCGGCCTGGCTGTGGGCAAAGGAGGACTTGCCTG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAGAAGGCTCACTGCCTTaGTCTGAGGCAGCATCCACA +
Preference number: 3 (lower is better)
Translates to: THAPQRGEREKYLRKGPAEGSLP*SEAAST
Trigger: TGTGGATGCTGCCTCAGACAAAGGCAGTGAGCCTTC...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp GGGTGGTATGTGCTGTCCCCTCAACCCTGGCAACCCTaGCCACTGGGAAAGGTTATTTCAGATCTCTCAGAC +
Preference number: 3 (lower is better)
Translates to: GWYVLSPQPWQP*PLGKVISDLSD
Trigger: GTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTGCCAGGGTTGAGGGGACAGCACATACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp CACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTaGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTA +
Preference number: 3 (lower is better)
Translates to: HRDLRPRERERG*RRNSGPSNNRV
Trigger: TACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp TTGAACCCTCCCAGGAGGCTCCAGCCAATGGGTCTGTaGTCTAGGACATGGTGCACATTTCTGGAAGTCAGA +
Preference number: 3 (lower is better)
Translates to: LNPPRRLQPMGL*SRTWCTFLEVR
Trigger: TCTGACTTCCAGAAATGTGCACCATGTCCTAGAGCACAGACCCATTGGCTGGAGCCTCCTGGGAGGGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp CAATGGGTCTGTGCTCTAGGACATGGTGCACATTTCTaGAAGTCAGACTGGAAATGGCACCTGGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: QWVCALGHGAHF*KSDWKWHLGGW
Trigger: CCAGCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAAATGTGCACCATGTCCTAGAGCACAGACCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCTTTCCTTTGCCTTTTaGCTTTTGGACAGGAGAAAG +
Preference number: 3 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRLSFAF*LLDRRK
Trigger: CTTTCTCCTGTCCAAAAGCAAAAAGGCAAAGGAAAG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGTGTTTTTCTTCTTCTTaGAGCCTTACTAGCGGTCTG +
Preference number: 3 (lower is better)
Translates to: LDSWPSREHHAALEAAGLCFSSS*SLTSGL
Trigger: CAGACCGCTAGTAAGGCTCAAAGAAGAAGAAAAACA...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCTGTTTTTCTTCTTCTTaGAGCCTTACTAGCGGTCTG +
Preference number: 3 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRCFSSS*SLTSGL
Trigger: CAGACCGCTAGTAAGGCTCAAAGAAGAAGAAAAACA...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAAGCAGTTTGTCTGAATaGTACTTGACTCTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: CGREGPPTPALSTPWLYGSSLSE*YLTLQR
Trigger: TCTTTGAAGAGTCAAGTACAATTCAGACAAACTGCT...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGAGCAGTTTGTCTGAATaGTACTTGACTCTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLSSLSE*YLTLQR
Trigger: TCTTTGAAGAGTCAAGTACAATTCAGACAAACTGCT...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGACAGGAGAAAGCAGTTaGTCTGAATTGTACTTGACT +
Preference number: 3 (lower is better)
Translates to: LDSWPSREHHAALEAAGLTGESS*SELYLT
Trigger: AGTCAAGTACAATTCAGACAAACTGCTTTCTCCTGT...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGAGCCCTCAGCACTCCTaGGCTTTATGGATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: GISHRADGLNPPRRLQPMSPQHS*ALWIQH
Trigger: ATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCT...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCTGGATAATAAATCGTTaGCGTTTCCTAAGAAACTGG +
Preference number: 3 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRWIINR*RFLRNW
Trigger: CCAGTTTCTTAGGAAACGCAAACGATTTATTATCCA...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR TCA 72 bp CACACACACAGGCACATTCACTCCTGGCCAGAAGTGTaGGCGTGCCCATTCTCATCCACACTCAAGAAAAGA +
Preference number: 3 (lower is better)
Translates to: HTHRHIHSWPEV*ACPFSSTLKKR
Trigger: TCTTTTCTTGAGTGTGGATGAGAATGGGCACGCTCACACTTCTGGCCAGGAGTGAATGTGCCTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAACAGGAGAAAGCAGTTaGTCTGAATTGTACTTGACT +
Preference number: 3 (lower is better)
Translates to: THAPQRGEREKYLRKGPATGESS*SELYLT
Trigger: AGTCAAGTACAATTCAGACAAACTGCTTTCTCCTGT...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGGGGGAAACTGAGGCCTaGTCAGAATTTAGTCCAAGA +
Preference number: 3 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGGETEA*SEFSPR
Trigger: TCTTGGACTAAATTCTGACAAGGCCTCAGTTTCCCC...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
50% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR GCA 72 bp ATGGCAGATTTGCAAGTTGATTCTTGGTCTTTGGACTaGCAGGCTACATGTGGGCACATTAGAGCCTGCGAG +
Preference number: 3 (lower is better)
Translates to: MADLQVDSWSLD*QATCGHIRACE
Trigger: CTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGACCAAGAATCAACTTGCAAATCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGTTGATTCTTGGTCTTaGGACTGCCAGGCTACATGT +
Preference number: 3 (lower is better)
Translates to: SPEKAVICLKSHSSLMADVDSWS*DCQATC
Trigger: ACATGTAGCCTGGCAGTCCAAAGACCAAGAATCAAC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR-3UTR CAA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCTGGATAATAAATCGTTaGCGTTTCCTAAGAAACTGG +
Preference number: 3 (lower is better)
Translates to: ERRVIGGACGDQSWETSFWIINR*RFLRNW
Trigger: CCAGTTTCTTAGGAAACGCAAACGATTTATTATCCA...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CCA 72 bp CCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATaGATTCAGCATCTGCTTAAGATTTTAGAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: PTHSSPQHSLAL*IQHLLKILEEN
Trigger: ATTTTCCTCTAAAATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCAGTCCCAGCCCCAGTaGGCGCCTCTCGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDQSQPQ*APLGAP
Trigger: CGGGGCTCCGAGAGGCGCGCACTGGGGCTGGGACTG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCCGCGACACCTCGATCTaGACCTCGCGCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPRDTSI*TSRTRR
Trigger: CCTGCGGGTGCGCGAGGTGCAGATCGAGGTGTCGCG...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCACGGGTCCCAGTGGCTaGTCGGAGACCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPTGPSG*SETCWG
Trigger: GCCCCAGCAGGTCTCCGAGCAGCCACTGGGACCCGT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGCAGCGGAAGCCACGCTaGGCGGAGGGCCGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLQRKPR*AEGRLA
Trigger: TGCCAGGCGGCCCTCCGCGCAGCGTGGCTTCCGCTG...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR GCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAGGGGTGGGGGCGCCATaGACTCGCGGCTACGCCAGT +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGGVGAP*TRGYAS
Trigger: ACTGGCGTAGCCGCGAGTGCATGGCGCCCCCACCCC...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGGGAGGGAGGGCCTCCTaGCTGCCCGCCCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEGGRAS*LPAPNQ
Trigger: TTGGTTGGGGGCGGGCAGGCAGGAGGCCCTCCCTCC...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAGGAGGGAGGGCCTCCTaGCTGCCCGCCCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGGGRAS*LPAPNQ
Trigger: TTGGTTGGGGGCGGGCAGGCAGGAGGCCCTCCCTCC...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCCAGGGCTGTCTCCCTaGCCCCAGTCTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRPGLSP*PQSRRR
Trigger: GCGGCGGCGAGACTGGGGCCAGGGAGACAGCCCTGG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGTCCGGGTGCGCTTCTaGCAGCCTCGGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRVRVRF*QPRPQR
Trigger: CCGCTGTGGCCGAGGCTGGCAGAAGCGCACCCGGAC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAGGCAGGCCCAAGAGCTaGTGGGAACCGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGGRPKS*WEPRLA
Trigger: CGCCAGCCTCGGTTCCCAGCAGCTCTTGGGCCTGCC...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTGCCCCAGGCCTCCCTaGACCTGCCTCCTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLCPRPP*TCLLPV
Trigger: GACTGGCAGGAGGCAGGTGCAGGGAGGCCTGGGGCA...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCCGCCAGGAGAGAGATaGCCGTGGAGGACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDPPGER*PWRTPL
Trigger: GAGGGGAGTCCTCCACGGGCATCTCTCTCCTGGCGG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGACGGGTCCCAGTGGCTaGTCGGAGACCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLTGPSG*SETCWG
Trigger: GCCCCAGCAGGTCTCCGAGCAGCCACTGGGACCCGT...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGCATGCTCCCGCGGCCTaGTTCGGGCGCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRHAPAA*FGRLSP
Trigger: GGGGGAGAGGCGCCCGAACCAGGCCGCGGGAGCATG...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGGCACCCGCAGGCCGGTaGCCTCATCCAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEAPAGR*PHPGLP
Trigger: AGGAAGGCCTGGATGAGGCCACCGGCCTGCGGGTGC...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCCACGCCCCATCGACTaGGCAGATGGTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDPRPID*ADGGAG
Trigger: GCCTGCACCACCATCTGCCCAGTCGATGGGGCGTGG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGGCCTCCGTTCTGGGGTaGGGGCGCCATGCACTCGCG +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRASVLG*GRHALA
Trigger: CGCGAGTGCATGGCGCCCCCACCCCAGAACGGAGGC...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGCGAAGACGGCCAGCTaGAGCCGCTTGACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPAKTAS*SRLTAE
Trigger: CTCAGCAGTCAAGCGGCTCCAGCTGGCCGTCTTCGC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGGAGAGAGATGCCCGTaGAGGACTCCCCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPGERCP*RTPLPY
Trigger: GTAGGGGAGGGGAGTCCTCCACGGGCATCTCTCTCC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCACTGCCTGGAGGTGTTaGGGAAGCGGGCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPTAWRC*GSGHLP
Trigger: AGGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCGGCTCTGCTGGCGCTaGCGGGAAGGAGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRRLCWR*REGVRE
Trigger: CTCCCTGACTCCTTCCCGTCAGCGCCAGCAGAGCCG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGCAGCGCCGCATCCCCTaGGGCCTCCAGCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRQRRIP*GLQQVA
Trigger: AGCCACCTGCTGGAGGCCTCAGGGGATGCGGCGCTG...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR TCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCCACCCCCACCGCCATaGGGATTGCCACGACCACGA +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEPPPPP*GLPRPR
Trigger: TCGTGGTCGTGGCAATCCTCATGGCGGTGGGGGTGG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCTGTGCCTCTCCAGGGTaGAAGTGCAGTGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPCASPG*KCSGGP
Trigger: AGGCCCTCCACTGCACTTTCACCCTGGAGAGGCACA...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCAGCGCCGCATCCCCTaGGGCCTCCAGCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDQRRIP*GLQHLH
Trigger: ATGCAAATGCTGGAGGCCTCAGGGGATGCGGCGCTG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373192.4
CDS-3UTR GCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCTGTGCCTCCGAAGTTaGGCGACCGCTCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTELCLRS*ATAQWR
Trigger: GCGCCACTGAGCGGTCGCGCAACTTCGGAGGCACAG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGCGCGACACCTCGATCTaGACCTCGCGCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLRDTSI*TSRTRR
Trigger: CCTGCGGGTGCGCGAGGTGCAGATCGAGGTGTCGCG...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACAGCTCCTCCACCTGCTaGCGCGACACCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDSSSTC*RDTSIC
Trigger: GCAGATCGAGGTGTCGCGGCAGCAGGTGGAGGAGCT...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGGGCACACTCAGTGCTaGAGGCTGACCACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPGHTQC*RLTTCS
Trigger: GGAGCAAGTGGTCAGCCTGCAGCACTGAGTGTGCCC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGACGAGCAGCGTCCCGCTaGAGTCACGGCCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGRAASR*SHGLRS
Trigger: AGAACGGAGGCCGTGACTGCAGCGGGACGCTGCTCG...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGCGGGTCCGCGGTAGATaGCGGCGCTGGCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLRVRGR*RRWLSG
Trigger: ACCTGACAGCCAGCGCCGGCATCTACCGCGGACCCG...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCTCCCCATCGTCCTGCTaGAGAGCTTCCCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPSPSSC*RASQRS
Trigger: GGACCTCTGGGAAGCTCTGCAGCAGGACGATGGGGA...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCAGGTCCCCATCGTCCTaGTGCAGAGCTTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPRSPSS*CRASQR
Trigger: CCTCTGGGAAGCTCTGCAGCAGGACGATGGGGACCT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGGGGACACGTGCACATaGTCTCCGAGGGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDGDTCT*SPRGIL
Trigger: CAGGATGCCCCTCGGAGAGCATGTGCACGTGTCCCC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCGCACTCGGAGCGCGGTaGGTGCCTGGCGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGALGAR*VPGAGS
Trigger: AGAGCCGGCGCCAGGCACCCACCGCGCTCCGAGTGC...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGAGGCCTCCAGCAGGTaGCTGTTGGGGTCGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPEASSR*LLGSLR
Trigger: TCTAAGCGACCCCAACAGCCACCTGCTGGAGGCCTC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGGCACCCCAGCGGGGCTaGTGGGTGGTAAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRAPQRG*WVVRSP
Trigger: GGGGCTTCTTACCACCCACCAGCCCCGCTGGGGTGC...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGAGCCTGCGAGGGGAATaGCACCCCCTGTCACGGCAC +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLSLRGE*HPLSRH
Trigger: GTGCCGTGACAGGGGGTGCCATTCCCCTCGCAGGCT...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACAAACAGAGGTGGGATTaGGGGCCATCCCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDKQRWD*GPSLGP
Trigger: GGGCCCCAGGGATGGCCCCCAATCCCACCTCTGTTT...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGGTGGGCCTGGGTCTTaGGCTGAAAGATCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPGGPGS*AERSSH
Trigger: GTGACTGGATCTTTCAGCTCAAGACCCAGGCCCACC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGCACTCGCCAGGCTGTTaGGGTCCCCATCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLHSPGC*GPHRPA
Trigger: AGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTG...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCTGGCTCCGGCGCTGTaGCTCCGAAGTTGCGCGACC +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRALAPAL*LRSCAT
Trigger: GGTCGCGCAACTTCGGAGGCACAGCGCCGGAGCCAG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCTCCGGCGGGCGGCACTaGAGGAGAACCTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRSGGRH*RRTSWS
Trigger: GGACCATGAGGTTCTCCTGCAGTGCCGCCCGCCGGA...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGTCCGGCGGGCGGCACTaGAGGAGAACCTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRSGGRH*RRTSWS
Trigger: GGACCATGAGGTTCTCCTGCAGTGCCGCCCGCCGGA...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCGGGGTGGGGGCGCCATaGACTCGCGGCTACGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGGVGAP*TRGYAS
Trigger: ACTGGCGTAGCCGCGAGTGCATGGCGCCCCCACCCC...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGCCGCCCCCAACCAACTaGCTCCAGAGGCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRPPPTN*LQRLQP
Trigger: GGGCTGAAGCCTCTGGAGGCAGTTGGTTGGGGGCGG...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAGGTGGGGGTGGTATGTaGTGTCCCCTCAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGGGGGM*CPLNPG
Trigger: GCCAGGGTTGAGGGGACAGCACATACCACCCCCACC...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGGCCTCTGTGCTGGCTaGAAGATCCTTGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDGLCAG*KILVPA
Trigger: GGCTGGGACAAGGATCTTGCAGCCAGCACAGAGGCC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGTCACGGCCTCCGTTCTaGGGTGGGGGCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRSRPPF*GGGAMH
Trigger: GTGCATGGCGCCCCCACCCCAGAACGGAGGCCGTGA...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAGGTAGATGCCGGCGCTaGCTGTCAGGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGGRCRR*LSGQEA
Trigger: TGCCTCCTGACCTGACAGCCAGCGCCGGCATCTACC...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGGGTAGATGCCGGCGCTaGCTGTCAGGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLGRCRR*LSGQEA
Trigger: TGCCTCCTGACCTGACAGCCAGCGCCGGCATCTACC...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGACGCAGGTGCAGGAAGTaGGTGTCCCGGGCGAAATCG +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGRRCRK*VSRAKS
Trigger: CGATTTCGCCCGGGACACCCACTTCCTGCACCTGCG...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAGCATGGGGGAGGTCATaGAGGGAGAGGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGAWGRS*RERRRL
Trigger: CAACCTGCGCCTCTCCCTCCATGACCTCCCCCATGC...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCTGTCCCCTCAACCCTaGCAACCCTGCCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTELSPQP*QPCPLG
Trigger: TCCCAGTGGGCAGGGTTGCCAGGGTTGAGGGGACAG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGCACCCCAGCGGGGCTaGTGGGTGGTAAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAAPQRG*WVVRSP
Trigger: GGGGCTTCTTACCACCCACCAGCCCCGCTGGGGTGC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGAGGCAGCATCCACATaGAGGCACCAGGGTCGAAAG +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPEAAST*RHQGRK
Trigger: CTTTCGACCCTGGTGCCTCCATGTGGATGCTGCCTC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGAGCCTGCGAGGGGAATaGCACCCCCTGTCACGGCAC +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRSLRGE*HPLSRH
Trigger: GTGCCGTGACAGGGGGTGCCATTCCCCTCGCAGGCT...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGGGACCAGAGTGCCCTaGAGGGTCCAGGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDGTRVP*RVQEMR
Trigger: TCTCATCTCCTGGACCCTCCAGGGCACTCTGGTCCC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCTCAGTGCTGCAGGCTaGCCACTTGCTCCACTCCGT +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTELSAAG*PLAPLR
Trigger: ACGGAGTGGAGCAAGTGGTCAGCCTGCAGCACTGAG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGCCACCCCCACCGCCATaGGGATTGCCACGACCACGA +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRPPPPP*GLPRPR
Trigger: TCGTGGTCGTGGCAATCCTCATGGCGGTGGGGGTGG...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCGTTGCAGAGCTGACTaGCACCGGGAAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTERCRAD*HREAQA
Trigger: AGCCTGAGCTTCCCGGTGTCAGTCAGCTCTGCAACG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGCCCCACGAGCTACTaGGTCCATGGCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLSPTSY*VHGREA
Trigger: GGCTTCCCTGCCATGGACTCAGTAGCTCGTGGGGCT...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCCAGAGCCTAGCCCCTaGTGCAGGCCTGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGPEPSP*CRPGPS
Trigger: TGAGGGGCCAGGCCTGCATCAGGGGCTAGGCTCTGG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACCAGAGCCTAGCCCCTaGTGCAGGCCTGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPAPEPSP*CRPGPS
Trigger: TGAGGGGCCAGGCCTGCATCAGGGGCTAGGCTCTGG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGTCGGAGCGCGGTGGGTaGCTGGCGCCGGCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGESERGG*LAPALE
Trigger: TTCGAGAGCCGGCGCCAGGCACCCACCGCGCTCCGA...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGCTCCTCCACCTGCTaGCGCGACACCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLSSSTC*RDTSIC
Trigger: GCAGATCGAGGTGTCGCGGCAGCAGGTGGAGGAGCT...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGGCGGTCTTCTGGAATaGCTGGCCCTCGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRGGLLE*LALAEG
Trigger: GCCTTCTGCGAGGGCCAGGCATTCCAGAAGACCGCC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGAGGGGTGTAGGAGCTaGGGGTTGCTGGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAEGCRS*GLLGLA
Trigger: GGCAAGGCCCAGCAACCCGCAGCTCCTACACCCCTC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGACCCTCCCCTTCCACTTaGCGCACGCAGATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGPSPST*RTQILQ
Trigger: CTGCAAGATCTGCGTGCGGCAAGTGGAAGGGGAGGG...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTCCCCATCGTCCTGCTaGAGAGCTTCCCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLSPSSC*RASQRS
Trigger: GGACCTCTGGGAAGCTCTGCAGCAGGACGATGGGGA...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGAGGGCCTCCTGCCTaGCCGCCCCCAACCAACTGC +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVGGPPA*PPPTNC
Trigger: GCAGTTGGTTGGGGGCGGGCAGGCAGGAGGCCCTCC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGACTCATCCCGTGCCATaGAGGGCCCCTCGAACAGGT +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLTHPVP*RAPRTG
Trigger: ACCTGTTCGAGGGGCCCTGCATGGCACGGGATGAGT...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGCAGGGACTCATCCCGTaGCATGCAGGGCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLQGLIP*HAGPLE
Trigger: TTCGAGGGGCCCTGCATGGCACGGGATGAGTCCCTG...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGCAGGGACTCATCCCGTaGCATGCAGGGCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRQGLIP*HAGPLE
Trigger: TTCGAGGGGCCCTGCATGGCACGGGATGAGTCCCTG...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGAGACCTGCTGGGGCATaGCCTAGGGTCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRRPAGA*PRVTAW
Trigger: CCAGGCAGTGACCCTAGGGCATGCCCCAGCAGGTCT...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCTAGCCTGGTCAGACTaGCCTCAAAGCCACGTGACC +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDLAWSD*PQSHVT
Trigger: GGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCTCAGGTGGGGACACGTaGACATGCTCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRSGGDT*TCSPRG
Trigger: GCCCCTCGGAGAGCATGTGCACGTGTCCCCACCTGA...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGTCCGACAGGCGGGCCTaGCGGATGATGAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLSDRRA*RMMRLW
Trigger: CCACAACCTCATCATCCGCCAGGCCCGCCTGTCGGA...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAGTCTTCTGGAATGCCTaGCCCTCGCAGAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGVFWNA*PSQKAP
Trigger: AGGGGCCTTCTGCGAGGGCCAGGCATTCCAGAAGAC...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCCACGCCCCATCGACTaGGCAGATGGTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAPRPID*ADGGAG
Trigger: GCCTGCACCACCATCTGCCCAGTCGATGGGGCGTGG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAGCTGGGAACCGAGGCTaGCGCTGCGCAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPAAGNRG*RCAGAG
Trigger: TCCTGCACCTGCGCAGCGCCAGCCTCGGTTCCCAGC...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTAGGCCCAAGAGCTGCTaGGAACCGAGGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRARPKSC*EPRLAL
Trigger: CAGCGCCAGCCTCGGTTCCCAGCAGCTCTTGGGCCT...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGACAGCAGGAGGCCTGTaGGTCCACAGGTCACCGAGG +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRTAGGL*VHRSPR
Trigger: CCTCGGTGACCTGTGGACCCACAGGCCTCCTGCTGT...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGCGAAGACGGCCAGCTaGAGCCGCTTGACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRAKTAS*SRLTAE
Trigger: CTCAGCAGTCAAGCGGCTCCAGCTGGCCGTCTTCGC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCAAGAGGCCTCTGTGCTaGCTGCAAGATCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPKRPLC*LQDPCP
Trigger: GGGACAAGGATCTTGCAGCCAGCACAGAGGCCTCTT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGGCACCTGCCTTGCCTaGAGTGCCAAGAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRGTCLA*SAKRER
Trigger: CCTCTCCCTCTTGGCACTCCAGGCAAGGCAGGTGCC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGGCAGGGAAGCCAGGCTaGGGACGCTGGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRAGKPG*GRWLEL
Trigger: CAGTTCCAGCCAGCGTCCCCAGCCTGGCTTCCCTGC...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGGTGAGGCCGAGCCCATaGGATGGGCACTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLVRPSP*DGHFGR
Trigger: CCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGTCAAGCTCCTGTCCTaGGGGCAGAGCAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDVKLLS*GQSKQL
Trigger: AAGCTGCTTGCTCTGCCCCCAGGACAGGAGCTTGAC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCAAGTCAGACTGGAAATaGCACCTGGGTGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPKSDWK*HLGGWL
Trigger: CAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGACACGCTCGCTCAGGTaGGGACACGTGCACATGCTC +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTETRSLR*GHVHML
Trigger: GAGCATGTGCACGTGTCCCCACCTGAGCGAGCGTGT...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CAA 72 bp GCCTTTGAAGAGGCCTCTGTGCTGGCTGCAAGATCCTaGTCCCAGCCACTGCCAGGCAGCTGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AFEEASVLAARS*SQPLPGSCTGQ
Trigger: CTGCCCTGTGCAGCTGCCTGGCAGTGGCTGGGACAAGGATCTTGCAGCCAGCACAGAGGCCTCTTCAAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGGTTGTGGTCGATGGTaGGCAGGAAGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDGCGRW*AGSWCP
Trigger: AGGACACCAACTTCCTGCTCACCATCGACCACAACC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGACATTCACGTAGACGATaGCGGTGGCAGTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGHSRRR*RWQWCS
Trigger: GGAGCACCACTGCCACCGTCATCGTCTACGTGAATG...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCAGAAGGCCCCTCCGTTaGGTGGAGCGGGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGRRPLR*VERGWC
Trigger: GCACCAACCCCGCTCCACTCAACGGAGGGGCCTTCT...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGAATAGGACTCGCCCGTaGACACGTAGGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLNRTRP*TRRCPA
Trigger: AGCTGGGCACCTACGTGTTCACGGGCGAGTCCTATT...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCTGGACAGTGGGATCTTaGAGGCATAAGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPWTVGS*RHKVPA
Trigger: AGCTGGGACCTTATGCCTTCAAGATCCCACTGTCCA...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCTCCGAGGGGCATCCTaGTGTGCCCACAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTELRGAS*CAHREK
Trigger: CTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGAG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGACAGGGAGCACCTCGCTaGCAGAATCAGTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGQGAPR*QNQCLL
Trigger: AAGCAGGCACTGATTCTGGCAGCGAGGTGCTCCCTG...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACGAGCAGCGTCCCGCTaGAGTCACGGCCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPARAASR*SHGLRS
Trigger: AGAACGGAGGCCGTGACTGCAGCGGGACGCTGCTCG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCACCGCCATGAGGATTaGCACGACCACGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEHRHED*HDHEDG
Trigger: GCCATCTTCGTGGTCGTGGCAATCCTCATGGCGGTG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCGAAGTCACGGCAGTTaGGGCGGTACACCACCACCC +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRARSHGS*GGTPPP
Trigger: GGGTGGTGGTGTACCGCCGCAACTGCCGTGACTTCG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCTGGCGCTGCGCAGGTaGAGGAAGTGGGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFLALRR*RKWVSR
Trigger: CCGGGACACCCACTTCCTGCACCTGCGCAGCGCCAG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGCAGGCCCAAGAGCTaGTGGGAACCGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVGRPKS*WEPRLA
Trigger: CGCCAGCCTCGGTTCCCAGCAGCTCTTGGGCCTGCC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGGTGGAGGCCAAGCTGTaGCTCTCCAGGGTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLVEAKL*LSRVKV
Trigger: CACTTTCACCCTGGAGAGGCACAGCTTGGCCTCCAC...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATATGCCCCAGGCCTCCCTaGACCTGCCTCCTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGICPRPP*TCLLPV
Trigger: GACTGGCAGGAGGCAGGTGCAGGGAGGCCTGGGGCA...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACCGCCAGGAGAGAGATaGCCGTGGAGGACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTPPGER*PWRTPL
Trigger: GAGGGGAGTCCTCCACGGGCATCTCTCTCCTGGCGG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGACCTGGGTGGCTGGCTaGACTTCATCCGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTETWVAG*TSSVKL
Trigger: GAGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGT...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCAGAGAGAGAAATACCTaGGTAAGGGCCCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPRERNT*VRALQP
Trigger: GGGTTGCAGGGCCCTTACGCAGGTATTTCTCTCTCT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGCCTTCCTGTGTGACGTaGTCGTTCTGGCTGACCCAC +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLPSCVT*SFWLTH
Trigger: GTGGGTCAGCCAGAACGACCACGTCACACAGGAAGG...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCACCACTCTGCCCAGCTaGACCAGCCGCCATTCACGT +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRTTLPS*TSRHSR
Trigger: ACGTGAATGGCGGCTGGTCCAGCTGGGCAGAGTGGT...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCGACTGGGCAGATGGTaGTGCAGGCGGTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRRLGRW*CRRSSG
Trigger: TCCAGAAGACCGCCTGCACCACCATCTGCCCAGTCG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCCACGACCACGAAGATaGCCACCACGAGCCCCGCAT +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAPRPRR*PPRAPH
Trigger: ATGCGGGGCTCGTGGTGGCCATCTTCGTGGTCGTGG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCTGGCCCAGAGCCCGTaGTGCTGGAGCTGTAGACCT +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRALAQSP*CWSCRP
Trigger: AGGTCTACAGCTCCAGCACCACGGGCTCTGGGCCAG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGCTGGGAACCGAGGCTaGCGCTGCGCAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVAGNRG*RCAGAG
Trigger: TCCTGCACCTGCGCAGCGCCAGCCTCGGTTCCCAGC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAACTTGCCCTGGGGAATaGCTCCATTGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGTCPGE*LHWAPA
Trigger: TGCTGGTGCCCAATGGAGCCATTCCCCAGGGCAAGT...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGGGCTCAATACTGTCTaGGTCCCTTCTGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDGLNTV*VPSESG
Trigger: CCCGCTTTCAGAAGGGACCCAGACAGTATTGAGCCC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGCATGGGGGAGGTCATaGAGGGAGAGGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAAWGRS*RERRRL
Trigger: CAACCTGCGCCTCTCCCTCCATGACCTCCCCCATGC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCTCCTCCAATGGGCATaGGGGAGGTCATGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRLLQWA*GRSWRE
Trigger: CTCCCTCCATGACCTCCCCCATGCCCATTGGAGGAG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGAGGGTGAAAGTGCAGTaGAGGGCCTTCTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTERVKVQ*RAFWLP
Trigger: TGGCAGCCAGAAGGCCCTCCACTGCACTTTCACCCT...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGACTGTCACGGCACGTGTaGTCTAGCCTGGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGLSRHV*SSLVRL
Trigger: CAGTCTGACCAGGCTAGACCACACGTGCCGTGACAG...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGAGCCAAAGGTGCCGCTaGCGCTGCTCCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGESQRCR*RCSLGL
Trigger: GAGACCCAGGGAGCAGCGTCAGCGGCACCTTTGGCT...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCATCCAGTCACGGGCACTaGCTTCGGCACAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPASSHGH*LRHSGA
Trigger: TGCCCCACTGTGCCGAAGTCAGTGCCCGTGACTGGA...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGAATAGGACTCGCCCGTaGACACGTAGGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRNRTRP*TRRCPA
Trigger: AGCTGGGCACCTACGTGTTCACGGGCGAGTCCTATT...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGTGTGCCTCTCCAGGGTaGAAGTGCAGTGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRCASPG*KCSGGP
Trigger: AGGCCCTCCACTGCACTTTCACCCTGGAGAGGCACA...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACACTCGCCAGGCTGTTaGGGTCCCCATCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTHSPGC*GPHRPA
Trigger: AGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCTCCTGGCCAGAAGTGTaGGCGTGCCCATTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRSWPEV*ACPFSS
Trigger: GGATGAGAATGGGCACGCTCACACTTCTGGCCAGGA...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCCCACGTTGCAGAGCTaGCTGACACCGGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAPTLQS*LTPGSS
Trigger: TGAGCTTCCCGGTGTCAGTCAGCTCTGCAACGTGGG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCCACTCCTGGGCATATaGAGCACAGCCAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGPLLGI*STARPP
Trigger: GGGTGGCCTGGCTGTGCTTCATATGCCCAGGAGTGG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCAGCCCCACGAGCTACTaGGTCCATGGCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGSPTSY*VHGREA
Trigger: GGCTTCCCTGCCATGGACTCAGTAGCTCGTGGGGCT...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGATAGAGCTGATGGTTTaGACCCTCCCAGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLIELMV*TLPGGS
Trigger: GGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTAT...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTACCCCCAAGGGTACCTaGGCTGCTTCCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRATPKGT*AASHQV
Trigger: TACCTGGTGGGAAGCAGCTCAGGTACCCTTGGGGGT...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCGGAGGGTCCAGGAGATaGGAAGGATCCCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGGGSRR*EGSPAP
Trigger: GGGTGCAGGGGATCCTTCTCATCTCCTGGACCCTCC...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGCAGGGAGCACCTCGCTaGCAGAATCAGTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRQGAPR*QNQCLL
Trigger: AAGCAGGCACTGATTCTGGCAGCGAGGTGCTCCCTG...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGGTCCGGGTGCGCTTCTaGCAGCCTCGGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGVRVRF*QPRPQR
Trigger: CCGCTGTGGCCGAGGCTGGCAGAAGCGCACCCGGAC...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAGGCGGTCTTCTGGAATaGCTGGCCCTCGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTGGLLE*LALAEG
Trigger: GCCTTCTGCGAGGGCCAGGCATTCCAGAAGACCGCC...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCTGCAGGCTGACCACTTaGTCCACTCCGTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGCRLTT*STPSTP
Trigger: GGGCGTGGACGGAGTGGAGCAAGTGGTCAGCCTGCA...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCAGTGGGCACACTCAGTaGTGCAGGCTGACCACTTGC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRSGHTQ*CRLTTC
Trigger: GCAAGTGGTCAGCCTGCAGCACTGAGTGTGCCCACT...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTTTGTCGGTGGAGTCCTaGAGGGCATACACGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRALSVES*RAYTGP
Trigger: CGGACCCGTGTATGCCCTGCAGGACTCCACCGACAA...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGCCAGCAGGTGTCTCTaGCAGAGTGGTATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRASRCL*QSGMQL
Trigger: CAGCTGCATACCACTCTGGCAGAGACACCTGCTGGC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGACATCCGCCAGTCATTaGCCCGTGAGTTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLTSASH*PVSWGH
Trigger: ATGCCCCCAACTCACGGGGCAATGACTGGCGGATGT...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGCCAGCATCTCACTCTTaGCCATCTCCTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLPASHS*PSPPRH
Trigger: GTGCCTTGGAGGAGATGGGCAAGAGTGAGATGCTGG...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCCGCCCCCAACCAACTaGCTCCAGAGGCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFPPPTN*LQRLQP
Trigger: GGGCTGAAGCCTCTGGAGGCAGTTGGTTGGGGGCGG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAGGTGGGGGTGGTATGTaGTGTCCCCTCAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPAGGGGM*CPLNPG
Trigger: GCCAGGGTTGAGGGGACAGCACATACCACCCCCACC...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCGGGGAAGCGGGCACCTaGCTTGCCTGGAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFGEAGT*LAWSAK
Trigger: CTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCC...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGTTCCCACCAGGTACATaGCCTCGGGGGCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLFPPGT*PRGLPL
Trigger: AAGAGGTAGCCCCCGAGGGCATGTACCTGGTGGGAA...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACATCAGGTGGGGACACGTaGACATGCTCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTSGGDT*TCSPRG
Trigger: GCCCCTCGGAGAGCATGTGCACGTGTCCCCACCTGA...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGCCACCAAGAGCTCCCTaGACCAAAGCTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLPPRAP*TKAPGH
Trigger: GTGACCAGGAGCTTTGGTGCAGGGAGCTCTTGGTGG...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGCCACCAAGAGCTCCCTaGACCAAAGCTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRPPRAP*TKAPGH
Trigger: GTGACCAGGAGCTTTGGTGCAGGGAGCTCTTGGTGG...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACCCTCCAGCATTTGCATaGACAGCCCATCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDPPAFA*TAHLCS
Trigger: ACTGCACAGATGGGCTGTGCATGCAAATGCTGGAGG...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATTCCGGCGCGCCCCTCTaGCTCCGGGTCTCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADSGAPL*LRVSER
Trigger: GCGCTCAGAGACCCGGAGCCAGAGGGGCGCGCCGGA...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCATCCGACAGGCGGGCCTaGCGGATGATGAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPASDRRA*RMMRLW
Trigger: CCACAACCTCATCATCCGCCAGGCCCGCCTGTCGGA...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGGTCTTCTGGAATGCCTaGCCCTCGCAGAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRVFWNA*PSQKAP
Trigger: AGGGGCCTTCTGCGAGGGCCAGGCATTCCAGAAGAC...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGCGACTGGGCAGATGGTaGTGCAGGCGGTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRRLGRW*CRRSSG
Trigger: TCCAGAAGACCGCCTGCACCACCATCTGCCCAGTCG...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCGCCCTCAGCACTCCTTaGCTTTATGGATTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPALSTP*LYGFSI
Trigger: GATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGC...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCCAGATGTATCTCCCTaGGGCTGTGGGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGPDVSP*GCGREG
Trigger: GCCCTCCCTCCCACAGCCCCAGGGAGATACATCTGG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGTCCCTGGCTCACAACTaGCCTGAGCAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLSLAHN*PEQSSS
Trigger: AGAGGAGGACTGCTCAGGCCAGTTGTGAGCCAGGGA...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACGGGAAGGGCAGATTCTaGATTCCTGGCCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDGKGRF*IPGHQE
Trigger: CTCTTGATGGCCAGGAATCCAGAATCTGCCCTTCCC...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGCAGGTTGGGTGGGGGTaGTATGTGCTGTCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRQVGWG*YVLSPQ
Trigger: TTGAGGGGACAGCACATACCACCCCCACCCAACCTG...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGCAGGTTGGGTGGGGGTaGTATGTGCTGTCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLQVGWG*YVLSPQ
Trigger: TTGAGGGGACAGCACATACCACCCCCACCCAACCTG...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAAAGAGGCCTCTGTGCTaGCTGCAAGATCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGKRPLC*LQDPCP
Trigger: GGGACAAGGATCTTGCAGCCAGCACAGAGGCCTCTT...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAGTGAGGCCGAGCCCATaGGATGGGCACTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPAVRPSP*DGHFGR
Trigger: CCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGCAGCTGCCTAGGAGCTaGGGAATAGGGACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRQLPRS*GIGTRV
Trigger: CACTCTGGTCCCTATTCCCCAGCTCCTAGGCAGCTG...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTCTGGCTCCGGGTCTCTaGGCGCTCGCCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKILAPGL*ALAWLR
Trigger: CCGGAGCCAGGCGAGCGCTCAGAGACCCGGAGCCAG...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR TCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGTGTCTGGGTCCCTTCTaGAAGCGGGAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLCLGPF*KREGTF
Trigger: GAAAGTACCCTCCCGCTTTCAGAAGGGACCCAGACA...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGTCCAGTCACGGGCACTaGCTTCGGCACAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVSSHGH*LRHSGA
Trigger: TGCCCCACTGTGCCGAAGTCAGTGCCCGTGACTGGA...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGCCTGGGTCTTGAGCTaGAAGATCCAGTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAAWVLS*KIQSRA
Trigger: TGCCCGTGACTGGATCTTTCAGCTCAAGACCCAGGC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAGAGCCGCTTGACTGCTaGGCGGGAATAGGACTCGCC +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIEPLDC*AGIGLA
Trigger: GGCGAGTCCTATTCCCGCTCAGCAGTCAAGCGGCTC...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATACCAGCTGGAGCCGCTTaGCTGCTGAGCGGGAATAGG +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIPAGAA*LLSGNR
Trigger: CCTATTCCCGCTCAGCAGTCAAGCGGCTCCAGCTGG...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACGCAGATCTTGCAGGTaGGCTCTGTGGAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTRRSCR*ALWRPS
Trigger: GCTTGGCCTCCACAGAGCTCACCTGCAAGATCTGCG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGGCTCACAACTGGCCTaGGCAGTCCTCCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRGSQLA*AVLLFH
Trigger: ATGAAAGAGGAGGACTGCTCAGGCCAGTTGTGAGCC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCGTTGCAGAGCTGACTaGCACCGGGAAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGRCRAD*HREAQA
Trigger: AGCCTGAGCTTCCCGGTGTCAGTCAGCTCTGCAACG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGTGCAGGCTGACCACTTaGTCCACTCCGTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGECRLTT*STPSTP
Trigger: GGGCGTGGACGGAGTGGAGCAAGTGGTCAGCCTGCA...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTAGTGGGCACACTCAGTaGTGCAGGCTGACCACTTGC +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRASGHTQ*CRLTTC
Trigger: GCAAGTGGTCAGCCTGCAGCACTGAGTGTGCCCACT...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGGGAGGGCCTTCTGGCTaGCACTCCAAATGTGATAGA +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLGGPSG*HSKCDR
Trigger: TCTATCACATTTGGAGTGGCAGCCAGAAGGCCCTCC...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCCAGCATCTCACTCTTaGCCATCTCCTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRPASHS*PSPPRH
Trigger: GTGCCTTGGAGGAGATGGGCAAGAGTGAGATGCTGG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTAGGAGGGCCTCCTGCCTaGCCGCCCCCAACCAACTGC +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLGGPPA*PPPTNC
Trigger: GCAGTTGGTTGGGGGCGGGCAGGCAGGAGGCCCTCC...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCTCTCTCTCTCCTCAATaGACACGCGTACATGTACAC +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPSLSPQ*TRVHVH
Trigger: GTGTACATGTACGCGTGTGCATTGAGGAGAGAGAGA...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCAACCCTGGCAACCCTaGCCACTGGGAAAGGTTATT +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEQPWQP*PLGKVI
Trigger: AATAACCTTTCCCAGTGGGCAGGGTTGCCAGGGTTG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAAGGCAAGTCCTCCTTTaGCCACAGCCAGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIRQVLL*PQPGRT
Trigger: GGTGCGGCCTGGCTGTGGGCAAAGGAGGACTTGCCT...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGGGGCACATTAGAGCCTaGGAGGGGAATGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEGHIRA*EGNGTP
Trigger: GGGGGTGCCATTCCCCTCGCAGGCTCTAATGTGCCC...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCGGGCACATTAGAGCCTaGGAGGGGAATGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFGHIRA*EGNGTP
Trigger: GGGGGTGCCATTCCCCTCGCAGGCTCTAATGTGCCC...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGAGGGGTCCAGCCCTTTaGCCCACCAAGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGERGPAL*PTKSSL
Trigger: CAGGGAGCTCTTGGTGGGGCAAAGGGCTGGACCCCT...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCAGGGGTCCAGCCCTTTaGCCCACCAAGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFRGPAL*PTKSSL
Trigger: CAGGGAGCTCTTGGTGGGGCAAAGGGCTGGACCCCT...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATAGCGCGGTGGGTGCCTaGCGCCGGCTCTCGAACGAG +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADSAVGA*RRLSNE
Trigger: CTCGTTCGAGAGCCGGCGCCAGGCACCCACCGCGCT...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCAATGTAGGCGTCCTGTaGCTCCTGCAGGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRNVGVL*LLQEVG
Trigger: CCCTACTTCCTGCAGGAGCCACAGGACGCCTACATT...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGCCTTCCTGTGTGACGTaGTCGTTCTGGCTGACCCAC +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRPSCVT*SFWLTH
Trigger: GTGGGTCAGCCAGAACGACCACGTCACACAGGAAGG...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGAAGTTGGTGTCCTaGGTGGGGTCGATGACATCC +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLRKLVS*VGSMTS
Trigger: GGATGTCATCGACCCCACCCAGGACACCAACTTCCT...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGACGGATGATGAGGTTGTaGTCGATGGTGAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGRMMRL*SMVSRK
Trigger: CTTCCTGCTCACCATCGACCACAACCTCATCATCCG...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACCACGCAGGTATAGTTaGCAGTGTCCGACAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTPRRYS*QCPTGG
Trigger: CCCGCCTGTCGGACACTGCCAACTATACCTGCGTGG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCACCACTCTGCCCAGCTaGACCAGCCGCCATTCACGT +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGTTLPS*TSRHSR
Trigger: ACGTGAATGGCGGCTGGTCCAGCTGGGCAGAGTGGT...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGTGCAGGCGGTCTTCTaGAATGCCTGGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVVQAVF*NAWPSQ
Trigger: CTGCGAGGGCCAGGCATTCCAGAAGACCGCCTGCAC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCTCGCGGCTACGCCAGTaGGCACACTCAGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFSRLRQ*AHSVLQ
Trigger: CTGCAGCACTGAGTGTGCCCACTGGCGTAGCCGCGA...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTAGCCTCCGTTCTGGGGTaGGGGCGCCATGCACTCGCG +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLASVLG*GRHALA
Trigger: CGCGAGTGCATGGCGCCCCCACCCCAGAACGGAGGC...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTTCACGGCCTCCGTTCTaGGGTGGGGGCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGSRPPF*GGGAMH
Trigger: GTGCATGGCGCCCCCACCCCAGAACGGAGGCCGTGA...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGCCACGACCACGAAGATaGCCACCACGAGCCCCGCAT +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEPRPRR*PPRAPH
Trigger: ATGCGGGGCTCGTGGTGGCCATCTTCGTGGTCGTGG...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATACTGGCCCAGAGCCCGTaGTGCTGGAGCTGTAGACCT +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGILAQSP*CWSCRP
Trigger: AGGTCTACAGCTCCAGCACCACGGGCTCTGGGCCAG...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATACGCAGGTGCAGGAAGTaGGTGTCCCGGGCGAAATCG +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIRRCRK*VSRAKS
Trigger: CGATTTCGCCCGGGACACCCACTTCCTGCACCTGCG...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGAGAGAGAGCGGGGGTaGAGAAGGAACTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVERERG*RRNSGP
Trigger: GGGCCCAGAGTTCCTTCTCCACCCCCGCTCTCTCTC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGCCAGATGTATCTCCCTaGGGCTGTGGGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVPDVSP*GCGREG
Trigger: GCCCTCCCTCCCACAGCCCCAGGGAGATACATCTGG...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATGTGGAGATCAGAGCTaGGAAACCAGCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGCGDQS*ETSFSA
Trigger: GGCTGAGAAGCTGGTTTCCCAGCTCTGATCTCCACA...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGCTGTCCCCTCAACCCTaGCAACCCTGCCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVLSPQP*QPCPLG
Trigger: TCCCAGTGGGCAGGGTTGCCAGGGTTGAGGGGACAG...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGCTCGAACAGGTTGGGTaGGGGTGGTATGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRLEQVG*GWYVLS
Trigger: GGACAGCACATACCACCCCCACCCAACCTGTTCGAG...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAACTGCCTGGAGGTGTTaGGGAAGCGGGCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGITAWRC*GSGHLP
Trigger: AGGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGT...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGACGTGTGGTCTAGCCTaGTCAGACTGCCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRTCGLA*SDCPQS
Trigger: GCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGT...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGCAGCTGCCTAGGAGCTaGGGAATAGGGACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRQLPRS*GIGTRV
Trigger: CACTCTGGTCCCTATTCCCCAGCTCCTAGGCAGCTG...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCAGAATAAACAGAGGTaGGATTGGGGGCCATCCCTG +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEQNKQR*DWGPSL
Trigger: CAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTACGGCTCTGCTGGCGCTaGCGGGAAGGAGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLRLCWR*REGVRE
Trigger: CTCCCTGACTCCTTCCCGTCAGCGCCAGCAGAGCCG...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTAGAAGGCCCCTCCGTTaGGTGGAGCGGGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGRRPLR*VERGWC
Trigger: GCACCAACCCCGCTCCACTCAACGGAGGGGCCTTCT...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCCAGCTGGAGCCGCTTaGCTGCTGAGCGGGAATAGG +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMPAGAA*LLSGNR
Trigger: CCTATTCCCGCTCAGCAGTCAAGCGGCTCCAGCTGG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGCGCAGATCTTGCAGGTaGGCTCTGTGGAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGERRSCR*ALWRPS
Trigger: GCTTGGCCTCCACAGAGCTCACCTGCAAGATCTGCG...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGAGTGAAAACCCTGTCTaGCCTACTCCCTGCACAACT +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTESENPV*PTPCTT
Trigger: AGTTGTGCAGGGAGTAGGTCAGACAGGGTTTTCACT...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGGCTAACAGTGACCAGTaGGGCCGAGCCCATGGGATG +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEANSDQ*GRAHGM
Trigger: CATCCCATGGGCTCGGCCTCACTGGTCACTGTTAGC...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAAAGAGCTCCTCCACCTaGTGCCGCGACACCTCGATC +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIKSSST*CRDTSI
Trigger: GATCGAGGTGTCGCGGCAGCAGGTGGAGGAGCTCTT...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGTGCGCAGGTAGGCGATaGGGACGTAGGCTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGCAGRR*GRRLGD
Trigger: GTCGCCGAGCCTACGTCCGCATCGCCTACCTGCGCA...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCCAGGGGCACCTCCTTaGCCAGAGGCTCCTGATCGA +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMPGAPP*PEAPDR
Trigger: TCGATCAGGAGCCTCTGGGCAAGGAGGTGCCCCTGG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAGGGCACACTCAGTGCTaGAGGCTGACCACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIGHTQC*RLTTCS
Trigger: GGAGCAAGTGGTCAGCCTGCAGCACTGAGTGTGCCC...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTACGGGTCCGCGGTAGATaGCGGCGCTGGCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLRVRGR*RRWLSG
Trigger: ACCTGACAGCCAGCGCCGGCATCTACCGCGGACCCG...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCTGGCGCTGCGCAGGTaGAGGAAGTGGGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADLALRR*RKWVSR
Trigger: CCGGGACACCCACTTCCTGCACCTGCGCAGCGCCAG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGATTTGGCCAGCAGCTTaGTCCTCCAATGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRIWPAA*SSNGHG
Trigger: CCCATGCCCATTGGAGGAGCAAGCTGCTGGCCAAAT...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAGTGGAGGCCAAGCTGTaGCTCTCCAGGGTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTVEAKL*LSRVKV
Trigger: CACTTTCACCCTGGAGAGGCACAGCTTGGCCTCCAC...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGCCCTCCCCTTCCACTTaGCGCACGCAGATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEPSPST*RTQILQ
Trigger: CTGCAAGATCTGCGTGCGGCAAGTGGAAGGGGAGGG...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCAGGTCCCCATCGTCCTaGTGCAGAGCTTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFRSPSS*CRASQR
Trigger: CCTCTGGGAAGCTCTGCAGCAGGACGATGGGGACCT...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGGAGGGTTATAGGAGGTaGCTGTGGAGATCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLREGYRR*LWRSEL
Trigger: CAGCTCTGATCTCCACAGGCACCTCCTATAACCCTC...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAACTCATCCCGTGCCATaGAGGGCCCCTCGAACAGGT +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGITHPVP*RAPRTG
Trigger: ACCTGTTCGAGGGGCCCTGCATGGCACGGGATGAGT...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGGGGGAAGCGGGCACCTaGCTTGCCTGGAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGGEAGT*LAWSAK
Trigger: CTTGGCACTCCAGGCAAGGCAGGTGCCCGCTTCCCC...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
58% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGTGCGGCCCTAAAACCTaGCCTCCTCTCAGGATATCA +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRCGPKT*PPLRIS
Trigger: TGATATCCTGAGAGGAGGGCAGGTTTTAGGGCCGCA...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAACCTGGGTGGCTGGCTaGACTTCATCCGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTTWVAG*TSSVKL
Trigger: GAGCTTGACGGATGAAGTGCAGCCAGCCACCCAGGT...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCAAGGGTACCTGAGCTaGTTCCCACCAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAQGYLS*FPPGTC
Trigger: GCATGTACCTGGTGGGAAGCAGCTCAGGTACCCTTG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGATGAGAAGGATCCCCTaGACCCTCAGGAGAACCCCT +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRMRRIP*TLRRTP
Trigger: AGGGGTTCTCCTGAGGGTGCAGGGGATCCTTCTCAT...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGAATCAGTGCCTGCTTaGCTCAGCCTCGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVESVPA*LSLGSQ
Trigger: CTGGGACCCGAGGCTGAGCCAAGCAGGCACTGATTC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGCACCCGCAGGCCGGTaGCCTCATCCAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADAPAGR*PHPGLP
Trigger: AGGAAGGCCTGGATGAGGCCACCGGCCTGCGGGTGC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCATGCAGGAGAACCTCATaGTCCAGGGGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPACRRTS*SRGTSL
Trigger: CAAGGAGGTGCCCCTGGACCATGAGGTTCTCCTGCA...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGTCGCGGCTACGCCAGTaGGCACACTCAGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMSRLRQ*AHSVLQ
Trigger: CTGCAGCACTGAGTGTGCCCACTGGCGTAGCCGCGA...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTTAAAGTTGACGGGGTaGAAACCACCAGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLLKLTG*KPPVRA
Trigger: TGCCCTGACTGGTGGTTTCCACCCCGTCAACTTTAA...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACTGACTTCGGCACAGTaGGGCATGGTGAGGATGACG +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPALTSAQ*GMVRMT
Trigger: CGTCATCCTCACCATGCCCCACTGTGCCGAAGTCAG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAAGCTTGCTCCTCCAATaGGCATGGGGGAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTSLLLQ*AWGRSW
Trigger: CCATGACCTCCCCCATGCCCATTGGAGGAGCAAGCT...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAAGGGTGAAAGTGCAGTaGAGGGCCTTCTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTRVKVQ*RAFWLP
Trigger: TGGCAGCCAGAAGGCCCTCCACTGCACTTTCACCCT...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGTTTGAGTCCCACTTCTaGGCCACATCCCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEFESHF*ATSLSR
Trigger: CCTAGAAAGGGATGTGGCCCAGAAGTGGGACTCAAA...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCTGTCACGGCACGTGTaGTCTAGCCTGGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGLSRHV*SSLVRL
Trigger: CAGTCTGACCAGGCTAGACCACACGTGCCGTGACAG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGGGAGGCTCCAGCCAATaGGTCTGTGCTCTAGGACAT +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRGGSSQ*VCALGH
Trigger: ATGTCCTAGAGCACAGACCCATTGGCTGGAGCCTCC...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAACACGCTCGCTCAGGTaGGGACACGTGCACATGCTC +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGITRSLR*GHVHML
Trigger: GAGCATGTGCACGTGTCCCCACCTGAGCGAGCGTGT...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGGACCAGAGTGCCCTaGAGGGTCCAGGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVGTRVP*RVQEMR
Trigger: TCTCATCTCCTGGACCCTCCAGGGCACTCTGGTCCC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACTGCACCAAAGCTCCTaGTCACCTCCCCTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPALHQSS*SPPLRD
Trigger: GTCCCTTAGGGGAGGTGACCAGGAGCTTTGGTGCAG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGCCATGTCCACAGACCTaGCAGGGGTCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEPCPQT*QGSSPL
Trigger: CAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGG...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGCATTCACGTAGACGATaGCGGTGGCAGTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVHSRRR*RWQWCS
Trigger: GGAGCACCACTGCCACCGTCATCGTCTACGTGAATG...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTAAGCCAAAGGTGCCGCTaGCGCTGCTCCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLSQRCR*RCSLGL
Trigger: GAGACCCAGGGAGCAGCGTCAGCGGCACCTTTGGCT...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCATGTCTGGGTCCCTTCTaGAAGCGGGAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPACLGPF*KREGTF
Trigger: GAAAGTACCCTCCCGCTTTCAGAAGGGACCCAGACA...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGGAGCCGCTTGACTGCTaGGCGGGAATAGGACTCGCC +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGEPLDC*AGIGLA
Trigger: GGCGAGTCCTATTCCCGCTCAGCAGTCAAGCGGCTC...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACTCACTGCCTTTGTCTaGGGCAGCATCCACATGGAG +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTLTAFV*GSIHME
Trigger: CTCCATGTGGATGCTGCCTCAGACAAAGGCAGTGAG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGACCCCCAAGGGTACCTaGGCTGCTTCCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMTPKGT*AASHQV
Trigger: TACCTGGTGGGAAGCAGCTCAGGTACCCTTGGGGGT...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCCTGATCGAAGTTCTTaGGCAGGTAGGCGATGCGGA +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGPDRSS*AGRRCG
Trigger: TCCGCATCGCCTACCTGCGCAAGAACTTCGATCAGG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGACATCTCGTAGAACTTaGCCTGGGGAATGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLTSRRT*PGEWLH
Trigger: ATGGAGCCATTCCCCAGGGCAAGTTCTACGAGATGT...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGGGCATCTAGGCTGTTaGATATCTTCTGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAGHLGC*ISSGGW
Trigger: CCATCCGCCAGAAGATATGCAACAGCCTAGATGCCC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCAACCCTGGCAACCCTaGCCACTGGGAAAGGTTATT +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAQPWQP*PLGKVI
Trigger: AATAACCTTTCCCAGTGGGCAGGGTTGCCAGGGTTG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGTGCGGCCCTAAAACCTaGCCTCCTCTCAGGATATCA +
Preference number: 4 (lower is better)
Translates to: WFLHRDLRPRERERGWRRCGPKT*PPLRIS
Trigger: TGATATCCTGAGAGGAGGGCAGGTTTTAGGGCCGCA...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAGCAGGGAAGGCTCACTaGCTTTGTCTGAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPAAGKAH*LCLRQH
Trigger: ATGCTGCCTCAGACAAAGGCAGTGAGCCTTCCCTGC...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACACAAGGGTACCTGAGCTaGTTCCCACCAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTQGYLS*FPPGTC
Trigger: GCATGTACCTGGTGGGAAGCAGCTCAGGTACCCTTG...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAAGGAAGTTGGTGTCCTaGGTGGGGTCGATGACATCC +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPARKLVS*VGSMTS
Trigger: GGATGTCATCGACCCCACCCAGGACACCAACTTCCT...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCCACGCAGGTATAGTTaGCAGTGTCCGACAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMPRRYS*QCPTGG
Trigger: CCCGCCTGTCGGACACTGCCAACTATACCTGCGTGG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGTGCAGGCGGTCTTCTaGAATGCCTGGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGVQAVF*NAWPSQ
Trigger: CTGCGAGGGCCAGGCATTCCAGAAGACCGCCTGCAC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGACTTGCCCTGGGGAATaGCTCCATTGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVTCPGE*LHWAPA
Trigger: TGCTGGTGCCCAATGGAGCCATTCCCCAGGGCAAGT...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCTCCTCCAATGGGCATaGGGGAGGTCATGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMLLQWA*GRSWRE
Trigger: CTCCCTCCATGACCTCCCCCATGCCCATTGGAGGAG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCTGTTGCATATCTTCTaGCGGATGGACAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRLLHIF*RMDSGI
Trigger: GATCCCACTGTCCATCCGCCAGAAGATATGCAACAG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGCATTGCCCCGTGAGTTaGGGGCATCTAGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEHCPVS*GHLGCC
Trigger: GCAACAGCCTAGATGCCCCCAACTCACGGGGCAATG...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCCACTCCTTGGCTTTATaGATTCAGCATCTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPHSLAL*IQHLLK
Trigger: CTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTG...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCCAGATTCTGGATTCCTaGCCATCAAGAGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRQILDS*PSREHH
Trigger: GTGGTGCTCTCTTGATGGCCAGGAATCCAGAATCTG...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGGGCAACCCTGCCCACTaGGAAAGGTTATTTCAGATC +
Preference number: 4 (lower is better)
Translates to: LDSWPSREHHAALEAAGLGNPAH*ERLFQI
Trigger: GATCTGAAATAACCTTTCCCAGTGGGCAGGGTTGCC...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGCAGGGAAGCCAGGCTaGGGACGCTGGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADAGKPG*GRWLEL
Trigger: CAGTTCCAGCCAGCGTCCCCAGCCTGGCTTCCCTGC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGCCGAGCCCATGGGATaGGCACTTTGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGAEPMG*ALWQGR
Trigger: CCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCGTCAAGCTCCTGTCCTaGGGGCAGAGCAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFVKLLS*GQSKQL
Trigger: AAGCTGCTTGCTCTGCCCCCAGGACAGGAGCTTGAC...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAGAAATGGCACCTGGGTaGCTGGCTGCACTTCATCCG +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIEMAPG*LAALHP
Trigger: CGGATGAAGTGCAGCCAGCCACCCAGGTGCCATTTC...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGCTCAGTGCTGCAGGCTaGCCACTTGCTCCACTCCGT +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGLSAAG*PLAPLR
Trigger: ACGGAGTGGAGCAAGTGGTCAGCCTGCAGCACTGAG...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGCCTGGGTCTTGAGCTaGAAGATCCAGTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMAWVLS*KIQSRA
Trigger: TGCCCGTGACTGGATCTTTCAGCTCAAGACCCAGGC...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGGTGGGCCTGGGTCTTaGGCTGAAAGATCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMGGPGS*AERSSH
Trigger: GTGACTGGATCTTTCAGCTCAAGACCCAGGCCCACC...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGTGTGGTAACTGTCCTTaGACATTAGCGGTTTCGGCT +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRCGNCP*TLAVSA
Trigger: AGCCGAAACCGCTAATGTTCAAGGACAGTTACCACA...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAGCCTTACTAGCGGTCTaGAGCTTTCTTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGALLAV*SFLSFL
Trigger: AAGGAAAGAAAGAAAGCTTCAGACCGCTAGTAAGGC...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAGGCTCACAACTGGCCTaGGCAGTCCTCCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIGSQLA*AVLLFH
Trigger: ATGAAAGAGGAGGACTGCTCAGGCCAGTTGTGAGCC...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTACCACTCCTGGGCATATaGAGCACAGCCAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLPLLGI*STARPP
Trigger: GGGTGGCCTGGCTGTGCTTCATATGCCCAGGAGTGG...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCAAGAAGATACATTGACTaGCCCTGTGGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPARRYID*PCGLRE
Trigger: CTCCCTGAGCCCACAGGGTCAGTCAATGTATCTTCT...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGAAGAGCTCCTCCACCTaGTGCCGCGACACCTCGATC +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGKSSST*CRDTSI
Trigger: GATCGAGGTGTCGCGGCAGCAGGTGGAGGAGCTCTT...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGCCTGATCGAAGTTCTTaGGCAGGTAGGCGATGCGGA +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVPDRSS*AGRRCG
Trigger: TCCGCATCGCCTACCTGCGCAAGAACTTCGATCAGG...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTACCAGGGGCACCTCCTTaGCCAGAGGCTCCTGATCGA +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLPGAPP*PEAPDR
Trigger: TCGATCAGGAGCCTCTGGGCAAGGAGGTGCCCCTGG...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTACGAAGTCACGGCAGTTaGGGCGGTACACCACCACCC +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLRSHGS*GGTPPP
Trigger: GGGTGGTGGTGTACCGCCGCAACTGCCGTGACTTCG...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGTTGTCGGTGGAGTCCTaGAGGGCATACACGGGTCCG +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGLSVES*RAYTGP
Trigger: CGGACCCGTGTATGCCCTGCAGGACTCCACCGACAA...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGATTTGGCCAGCAGCTTaGTCCTCCAATGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVIWPAA*SSNGHG
Trigger: CCCATGCCCATTGGAGGAGCAAGCTGCTGGCCAAAT...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCGGAGGGCCTTCTGGCTaGCACTCCAAATGTGATAGA +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGGGPSG*HSKCDR
Trigger: TCTATCACATTTGGAGTGGCAGCCAGAAGGCCCTCC...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATCTCAGCCATCACTCTaGTTTACAGAAGGAGAAACC +
Preference number: 4 (lower is better)
Translates to: CGREGPPTPALSTPWLYGSQPSL*FTEGET
Trigger: GGTTTCTCCTTCTGTAAAGCAGAGTGATGGCTGAGA...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGCAGGGAAGGCTCACTaGCTTTGTCTGAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVAGKAH*LCLRQH
Trigger: ATGCTGCCTCAGACAAAGGCAGTGAGCCTTCCCTGC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGATGAGAAGGATCCCCTaGACCCTCAGGAGAACCCCT +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVMRRIP*TLRRTP
Trigger: AGGGGTTCTCCTGAGGGTGCAGGGGATCCTTCTCAT...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGGAATCAGTGCCTGCTTaGCTCAGCCTCGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGESVPA*LSLGSQ
Trigger: CTGGGACCCGAGGCTGAGCCAAGCAGGCACTGATTC...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGAATGTAGGCGTCCTGTaGCTCCTGCAGGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVNVGVL*LLQEVG
Trigger: CCCTACTTCCTGCAGGAGCCACAGGACGCCTACATT...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTAGGCCCAAGAGCTGCTaGGAACCGAGGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIRPKSC*EPRLAL
Trigger: CAGCGCCAGCCTCGGTTCCCAGCAGCTCTTGGGCCT...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGGGGCTCAATACTGTCTaGGTCCCTTCTGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEGLNTV*VPSESG
Trigger: CCCGCTTTCAGAAGGGACCCAGACAGTATTGAGCCC...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTAGAGAGAGAGCGGGGGTaGAGAAGGAACTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLERERG*RRNSGP
Trigger: GGGCCCAGAGTTCCTTCTCCACCCCCGCTCTCTCTC...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGGAGAGAGATGCCCGTaGAGGACTCCCCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADGERCP*RTPLPY
Trigger: GTAGGGGAGGGGAGTCCTCCACGGGCATCTCTCTCC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCGGGAAGGGCAGATTCTaGATTCCTGGCCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGGKGRF*IPGHQE
Trigger: CTCTTGATGGCCAGGAATCCAGAATCTGCCCTTCCC...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCTGTGGAGATCAGAGCTaGGAAACCAGCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGCGDQS*ETSFSA
Trigger: GGCTGAGAAGCTGGTTTCCCAGCTCTGATCTCCACA...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGGCACCTGCCTTGCCTaGAGTGCCAAGAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADGTCLA*SAKRER
Trigger: CCTCTCCCTCTTGGCACTCCAGGCAAGGCAGGTGCC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTAGCCGAGCCCATGGGATaGGCACTTTGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLAEPMG*ALWQGR
Trigger: CCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGC...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATACTAGACGTCCAAACCTaGGACGCAGAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGILDVQT*DAEEHT
Trigger: TGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAG...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCTGCACCAAAGCTCCTaGTCACCTCCCCTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMLHQSS*SPPLRD
Trigger: GTCCCTTAGGGGAGGTGACCAGGAGCTTTGGTGCAG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTCCATGTCCACAGACCTaGCAGGGGTCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGPCPQT*QGSSPL
Trigger: CAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGG...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACAGAATAAACAGAGGTaGGATTGGGGGCCATCCCTG +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPAQNKQR*DWGPSL
Trigger: CAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCAGAAAGCAGTTTGTCTaGATTGTACTTGACTCTTCA +
Preference number: 4 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPRKQFV*IVLDSS
Trigger: TGAAGAGTCAAGTACAATTCAGACAAACTGCTTTCT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTGGAGGGTCCAGGAGATaGGAAGGATCCCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIGGSRR*EGSPAP
Trigger: GGGTGCAGGGGATCCTTCTCATCTCCTGGACCCTCC...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGCGGGTTGCTGGGCCTTaGCGTCTTAAAGTTGACGGG +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGRVAGP*RLKVDG
Trigger: CCCGTCAACTTTAAGACGGCAAGGCCCAGCAACCCG...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGGCCTCTGTGCTGGCTaGAAGATCCTTGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADGLCAG*KILVPA
Trigger: GGCTGGGACAAGGATCTTGCAGCCAGCACAGAGGCC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGCAGCCAATGGGTCTGTaGTCTAGGACATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVQPMGL*SRTWCT
Trigger: TGTGCACCATGTCCTAGAGCACAGACCCATTGGCTG...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAAGAGAGAGAAATACCTaGGTAAGGGCCCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIRERNT*VRALQP
Trigger: GGGTTGCAGGGCCCTTACGCAGGTATTTCTCTCTCT...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTGGGGACACGTGCACATaGTCTCCGAGGGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIGDTCT*SPRGIL
Trigger: CAGGATGCCCCTCGGAGAGCATGTGCACGTGTCCCC...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCGGATGATGAGGTTGTaGTCGATGGTGAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFRMMRL*SMVSRK
Trigger: CTTCCTGCTCACCATCGACCACAACCTCATCATCCG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGCATCGACTGGGCAGATaGTGGTGCAGGCGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGHRLGR*WCRRSS
Trigger: AGAAGACCGCCTGCACCACCATCTGCCCAGTCGATG...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTCATCGACTGGGCAGATaGTGGTGCAGGCGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGHRLGR*WCRRSS
Trigger: AGAAGACCGCCTGCACCACCATCTGCCCAGTCGATG...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCCAGCAGGTGGCTGTTaGGGTCGCTTAGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFPAGGC*GRLEFS
Trigger: AGAAAACTCTAAGCGACCCCAACAGCCACCTGCTGG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR CCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTACAGCAGGAGGCCTGTaGGTCCACAGGTCACCGAGG +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKITAGGL*VHRSPR
Trigger: CCTCGGTGACCTGTGGACCCACAGGCCTCCTGCTGT...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGAGCTTGCTCCTCCAATaGGCATGGGGGAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGSLLLQ*AWGRSW
Trigger: CCATGACCTCCCCCATGCCCATTGGAGGAGCAAGCT...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACTGTTGCATATCTTCTaGCGGATGGACAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPALLHIF*RMDSGI
Trigger: GATCCCACTGTCCATCCGCCAGAAGATATGCAACAG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGCTCGAACAGGTTGGGTaGGGGTGGTATGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGLEQVG*GWYVLS
Trigger: GGACAGCACATACCACCCCCACCCAACCTGTTCGAG...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTGCTGGGGACGCTGGCTaGAACTGCGGCCCTAAAACC +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIAGDAG*NCGPKT
Trigger: GGTTTTAGGGCCGCAGTTCCAGCCAGCGTCCCCAGC...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTATGGGATGGGCACTTTaGCAGGGAAGGCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGMGWAL*QGRLTA
Trigger: GGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCAT...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGAAATGGCACCTGGGTaGCTGGCTGCACTTCATCCG +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGEMAPG*LAALHP
Trigger: CGGATGAAGTGCAGCCAGCCACCCAGGTGCCATTTC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCACTCTTGGGTCTGAATTaGAGGAGAAACCACCCATCC +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPALLGLN*RRNHPS
Trigger: GGATGGGTGGTTTCTCCTCCAATTCAGACCCAAGAG...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTAAACAGAGGTGGGATTaGGGGCCATCCCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIKQRWD*GPSLGP
Trigger: GGGCCCCAGGGATGGCCCCCAATCCCACCTCTGTTT...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGGGTTGTGGTCGATGGTaGGCAGGAAGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGGCGRW*AGSWCP
Trigger: AGGACACCAACTTCCTGCTCACCATCGACCACAACC...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCAGCAGATGAGTCAGTaGTGTCTGTGTCGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFQQMSQ*CLCRSH
Trigger: GTGACTTCGACACAGACATCACTGACTCATCTGCTG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGTGGACAGTGGGATCTTaGAGGCATAAGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMWTVGS*RHKVPA
Trigger: AGCTGGGACCTTATGCCTTCAAGATCCCACTGTCCA...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTATCCTGGCCAGAAGTGTaGGCGTGCCCATTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLSWPEV*ACPFSS
Trigger: GGATGAGAATGGGCACGCTCACACTTCTGGCCAGGA...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCTTCATCTCTCTGTTTaGGTCCCACTTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMLHLSV*VPLLGH
Trigger: GTGGCCCAGAAGTGGGACTCAAACAGAGAGATGAAG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGGCAGATTTGCAAGTTaGTTCTTGGTCTTTGGACTG +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAGRFAS*FLVFGL
Trigger: CAGTCCAAAGACCAAGAATCAACTTGCAAATCTGCC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCACCGCCATGAGGATTaGCACGACCACGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADHRHED*HDHEDG
Trigger: GCCATCTTCGTGGTCGTGGCAATCCTCATGGCGGTG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCGGGTTGCTGGGCCTTaGCGTCTTAAAGTTGACGGG +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADRVAGP*RLKVDG
Trigger: CCCGTCAACTTTAAGACGGCAAGGCCCAGCAACCCG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGACATCTCGTAGAACTTaGCCTGGGGAATGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: CPLGKVISDLSDRSGVGETSRRT*PGEWLH
Trigger: ATGGAGCCATTCCCCAGGGCAAGTTCTACGAGATGT...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATGCCAGCAGGTGTCTCTaGCAGAGTGGTATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADASRCL*QSGMQL
Trigger: CAGCTGCATACCACTCTGGCAGAGACACCTGCTGGC...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGAGGCCTCCAGCATTTaGATGCACAGCCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGEASSI*MHSPSV
Trigger: CACAGATGGGCTGTGCATGCAAATGCTGGAGGCCTC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATATTAAAGTTGACGGGGTaGAAACCACCAGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGILKLTG*KPPVRA
Trigger: TGCCCTGACTGGTGGTTTCCACCCCGTCAACTTTAA...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCTGGCGGATGGACAGTaGGATCTTGAAGGCATAAGG +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMLADGQ*DLEGIR
Trigger: CCTTATGCCTTCAAGATCCCACTGTCCATCCGCCAG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCATTGCCCCGTGAGTTaGGGGCATCTAGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADHCPVS*GHLGCC
Trigger: GCAACAGCCTAGATGCCCCCAACTCACGGGGCAATG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGCACTCCTTGGCTTTATaGATTCAGCATCTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: DSWPSREHHAALEAAGLRHSLAL*IQHLLK
Trigger: CTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTG...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGCCCTCAGCACTCCTTaGCTTTATGGATTCAGCATC +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVALSTP*LYGFSI
Trigger: GATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCTTTGAGTCCCACTTCTaGGCCACATCCCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFFESHF*ATSLSR
Trigger: CCTAGAAAGGGATGTGGCCCAGAAGTGGGACTCAAA...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGACTGGAAATGGCACCTaGGTGGCTGGCTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGTGNGT*VAGCTS
Trigger: TGAAGTGCAGCCAGCCACCCAGGTGCCATTTCCAGT...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGTTCTGGAAGTCAGACTaGAAATGGCACCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMFWKSD*KWHLGG
Trigger: GCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAA...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGGAGGCTCCAGCCAATaGGTCTGTGCTCTAGGACAT +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGGGSSQ*VCALGH
Trigger: ATGTCCTAGAGCACAGACCCATTGGCTGGAGCCTCC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTCTAGACGTCCAAACCTaGGACGCAGAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGLDVQT*DAEEHT
Trigger: TGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAG...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CAA 72 bp GAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTaGGCTTTATGGATTCAGCATCTGCTTAAGATTTTA +
Preference number: 4 (lower is better)
Translates to: EGGPTHSSPQHS*ALWIQHLLKIL
Trigger: TAAAATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
3UTR CAA 72 bp AAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTTaGAACCCTCCCAGGAGGCTCCAGCCAATGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KAFLGISHRADG*NPPRRLQPMGL
Trigger: CAGACCCATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTACTCACTGCCTTTGTCTaGGGCAGCATCCACATGGAG +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLLTAFV*GSIHME
Trigger: CTCCATGTGGATGCTGCCTCAGACAAAGGCAGTGAG...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACAGGCAGATTTGCAAGTTaGTTCTTGGTCTTTGGACTG +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTGRFAS*FLVFGL
Trigger: CAGTCCAAAGACCAAGAATCAACTTGCAAATCTGCC...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATATAGAGCTGATGGTTTaGACCCTCCCAGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADIELMV*TLPGGS
Trigger: GGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTAT...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGAGAAGATACATTGACTaGCCCTGTGGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGRRYID*PCGLRE
Trigger: CTCCCTGAGCCCACAGGGTCAGTCAATGTATCTTCT...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGGGCATCTAGGCTGTTaGATATCTTCTGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGGHLGC*ISSGGW
Trigger: CCATCCGCCAGAAGATATGCAACAGCCTAGATGCCC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACACACGCACCCCAGAGAGGAGAGAGAGAGAAATACCTGCGTAAGGGCCCTGCATCTCAGCCATCACTCTaGTTTACAGAAGGAGAAACC +
Preference number: 4 (lower is better)
Translates to: THAPQRGEREKYLRKGPASQPSL*FTEGET
Trigger: GGTTTCTCCTTCTGTAAAGCAGAGTGATGGCTGAGA...TGCAGGGCCCTTACGCAGGTATTTCTCTCTCTCTCCTCTCTGGGGTGCGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGGAGGGTTATAGGAGGTaGCTGTGGAGATCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGEGYRR*LWRSEL
Trigger: CAGCTCTGATCTCCACAGGCACCTCCTATAACCCTC...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTCAGCCAATGGGTCTGTaGTCTAGGACATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGQPMGL*SRTWCT
Trigger: TGTGCACCATGTCCTAGAGCACAGACCCATTGGCTG...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTTTCCCACCAGGTACATaGCCTCGGGGGCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIFPPGT*PRGLPL
Trigger: AAGAGGTAGCCCCCGAGGGCATGTACCTGGTGGGAA...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTCTGGCGGATGGACAGTaGGATCTTGAAGGCATAAGG +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGLADGQ*DLEGIR
Trigger: CCTTATGCCTTCAAGATCCCACTGTCCATCCGCCAG...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTGAGGCAGCATCCACATaGAGGCACCAGGGTCGAAAG +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIEAAST*RHQGRK
Trigger: CTTTCGACCCTGGTGCCTCCATGTGGATGCTGCCTC...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTATGGGATGGGCACTTTaGCAGGGAAGGCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIMGWAL*QGRLTA
Trigger: GGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCAT...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATAAGTCAGACTGGAAATaGCACCTGGGTGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADKSDWK*HLGGWL
Trigger: CAGCCAGCCACCCAGGTGCCATTTCCAGTCTGACTT...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTTTCTGGAAGTCAGACTaGAAATGGCACCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QTDGVGKAFLGISHRADGFWKSD*KWHLGG
Trigger: GCCACCCAGGTGCCATTTCCAGTCTGACTTCCAGAA...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCATGGTGCACATTTCTaGAAGTCAGACTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SLDCQATCGHIRACEGNGHGAHF*KSDWKW
Trigger: CCATTTCCAGTCTGACTTCCAGAAATGTGCACCATG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGTCGGCAAAGCCTTTCTaGGCATTTCTCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVSAKPF*AFLIEL
Trigger: CAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGA...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCTCGGCAAAGCCTTTCTaGGCATTTCTCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFSAKPF*AFLIEL
Trigger: CAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGA...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTAGCCTCCACAGACGGATaGAGTCGGCAAAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLASTDG*SRQSLS
Trigger: AGAAAGGCTTTGCCGACTCCATCCGTCTGTGGAGGC...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGTGTGGTAACTGTCCTTaGACATTAGCGGTTTCGGCT +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMCGNCP*TLAVSA
Trigger: AGCCGAAACCGCTAATGTTCAAGGACAGTTACCACA...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGAGTGAAAACCCTGTCTaGCCTACTCCCTGCACAACT +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGSENPV*PTPCTT
Trigger: AGTTGTGCAGGGAGTAGGTCAGACAGGGTTTTCACT...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAGCTAAATCTAGACAGTaGAAACCCTGTCTGACCTAC +
Preference number: 4 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIAKSRQ*KPCLTY
Trigger: GTAGGTCAGACAGGGTTTTCACTGTCTAGATTTAGC...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTTTTTCTTATTTTGCATaGACAGCCCATCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAFSYFA*TAHLCS
Trigger: ACTGCACAGATGGGCTGTGCATGCAAAATAAGAAAA...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR CCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTACGTGTGGTCTAGCCTaGTCAGACTGCCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKITCGLA*SDCPQS
Trigger: GCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGT...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCATGGTGCACATTTCTaGAAGTCAGACTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFHGAHF*KSDWKW
Trigger: CCATTTCCAGTCTGACTTCCAGAAATGTGCACCATG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCAGCAGATGAGTCAGTaGTGTCTGTGTCGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADQQMSQ*CLCRSH
Trigger: GTGACTTCGACACAGACATCACTGACTCATCTGCTG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGGCCTTACTAGCGGTCTaGAGCTTTCTTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GISHRADGLNPPRRLQPMALLAV*SFLSFL
Trigger: AAGGAAAGAAAGAAAGCTTCAGACCGCTAGTAAGGC...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ACAGGCACACCAAACCCTAGACGTCCAAACCTGGGACGCAGAGGAGCACACACATTTCCTTTGCCTTTTTaGTTTTGGACAGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TGTPNPRRPNLGRRGAHTFPLPF*FWTGES
Trigger: GCTTTCTCCTGTCCAAAAGCAAAAAGGCAAAGGAAA...TGTGTGTGCTCCTCTGCGTCCCAGGTTTGGACGTCTAGGGTTTGGTGTGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGTCTCTCTCTCCTCAATaGACACGCGTACATGTACAC +
Preference number: 4 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGSLSPQ*TRVHVH
Trigger: GTGTACATGTACGCGTGTGCATTGAGGAGAGAGAGA...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCAGATTCTGGATTCCTaGCCATCAAGAGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADQILDS*PSREHH
Trigger: GTGGTGCTCTCTTGATGGCCAGGAATCCAGAATCTG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCTCTTGGGTCTGAATTaGAGGAGAAACCACCCATCC +
Preference number: 4 (lower is better)
Translates to: SPEKAVICLKSHSSLMADLLGLN*RRNHPS
Trigger: GGATGGGTGGTTTCTCCTCCAATTCAGACCCAAGAG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR GCA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCTTTCCTTTGCCTTTTTaGTTTTGGACAGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: ERRVIGGACGDQSWETSFFPLPF*FWTGES
Trigger: GCTTTCTCCTGTCCAAAAGCAAAAAGGCAAAGGAAA...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CCA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTGGCAACCCTGCCCACTaGGAAAGGTTATTTCAGATC +
Preference number: 4 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIGNPAH*ERLFQI
Trigger: GATCTGAAATAACCTTTCCCAGTGGGCAGGGTTGCC...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR TCA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGAGAAAGCAGTTTGTCTaGATTGTACTTGACTCTTCA +
Preference number: 4 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVRKQFV*IVLDSS
Trigger: TGAAGAGTCAAGTACAATTCAGACAAACTGCTTTCT...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 90 bp CTCCCGCGGCCTGGTTCGGGCGCCTCTCCCCCAGGGCTGTCTCCCTaGCCCCAGTCTCGCCGCCGCCGTCTCCGCCGCCGCCGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LPRPGSGASPPGLSP*PQSRRRRLRRRRLL
Trigger: GAGGAGGCGGCGGCGGCGGAGACGGCGGCGGCGAGACTGGGGCCAGGGAGACAGCCCTGGGGGAGAGGCGCCCGAACCAGGCCGCGGGAG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS GCA 90 bp AGCCACGCTGCGCGGAGGGCCGCCTGGCACTCGGAGCGCGGTGGGTaGCTGGCGCCGGCTCTCGAACGAGGCTCCGGCGCGCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SHAARRAAWHSERGG*LAPALERGSGAPLW
Trigger: CCAGAGGGGCGCGCCGGAGCCTCGTTCGAGAGCCGGCGCCAGGCACCCACCGCGCTCCGAGTGCCAGGCGGCCCTCCGCGCAGCGTGGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS GCA 90 bp GGCAGCGCCAGCCCGTGCCTTCCGTGGGGGCAGCGGAAGCCACGCTaGGCGGAGGGCCGCCTGGCACTCGGAGCGCGGTGGGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GSASPCLPWGQRKPR*AEGRLALGARWVPG
Trigger: GCCAGGCACCCACCGCGCTCCGAGTGCCAGGCGGCCCTCCGCGCAGCGTGGCTTCCGCTGCCCCCACGGAAGGCACGGGCTGGCGCTGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS CCA 90 bp ACGCTGCGCGGAGGGCCGCCTGGCACTCGGAGCGCGGTGGGTGCCTaGCGCCGGCTCTCGAACGAGGCTCCGGCGCGCCCCTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: TLRGGPPGTRSAVGA*RRLSNEAPARPSGS
Trigger: GGAGCCAGAGGGGCGCGCCGGAGCCTCGTTCGAGAGCCGGCGCCAGGCACCCACCGCGCTCCGAGTGCCAGGCGGCCCTCCGCGCAGCGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS CCA 90 bp CGGAAGCCACGCTGCGCGGAGGGCCGCCTGGCACTCGGAGCGCGGTaGGTGCCTGGCGCCGGCTCTCGAACGAGGCTCCGGCGCGCCCCT +
Preference number: 5 (lower is better)
Translates to: RKPRCAEGRLALGAR*VPGAGSRTRLRRAP
Trigger: AGGGGCGCGCCGGAGCCTCGTTCGAGAGCCGGCGCCAGGCACCCACCGCGCTCCGAGTGCCAGGCGGCCCTCCGCGCAGCGTGGCTTCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS CCA 90 bp GCCTTCCGTGGGGGCAGCGGAAGCCACGCTGCGCGGAGGGCCGCCTaGCACTCGGAGCGCGGTGGGTGCCTGGCGCCGGCTCTCGAACGA +
Preference number: 5 (lower is better)
Translates to: AFRGGSGSHAARRAA*HSERGGCLAPALER
Trigger: TCGTTCGAGAGCCGGCGCCAGGCACCCACCGCGCTCCGAGTGCCAGGCGGCCCTCCGCGCAGCGTGGCTTCCGCTGCCCCCACGGAAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS GCA 90 bp CCCTCTGGCTCCGGGTCTCTGAGCGCTCGCCTGGCTCCGGCGCTGTaGCTCCGAAGTTGCGCGACCGCTCAGTGGCGCTCGCAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: PSGSGSLSARLAPAL*LRSCATAQWRSQRR
Trigger: CCGCCGCTGCGAGCGCCACTGAGCGGTCGCGCAACTTCGGAGGCACAGCGCCGGAGCCAGGCGAGCGCTCAGAGACCCGGAGCCAGAGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS GCA 90 bp ATCAGTGCCTGCTTGGCTCAGCCTCGGGTCCCAGCAGAGCAGCAGTaGCAGCAGCAGCGCGCCCCGAGCTCCGCTCCGGGCCCCCATGCT +
Preference number: 5 (lower is better)
Translates to: ISACLAQPRVPAEQQ*QQQRAPSSAPGPHA
Trigger: AGCATGGGGGCCCGGAGCGGAGCTCGGGGCGCGCTGCTGCTGGCACTGCTGCTCTGCTGGGACCCGAGGCTGAGCCAAGCAGGCACTGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp GCGTCCCGCTGCAGTCACGGCCTCCGTTCTGGGGTGGGGGCGCCATaGACTCGCGGCTACGCCAGTGGGCACACTCAGTGCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ASRCSHGLRSGVGAP*TRGYASGHTQCCRL
Trigger: CAGCCTGCAGCACTGAGTGTGCCCACTGGCGTAGCCGCGAGTGCATGGCGCCCCCACCCCAGAACGGAGGCCGTGACTGCAGCGGGACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp GTGCCGCTGACGCTGCTCCCTGGGTCTCGGGGCAGGCCCAAGAGCTaGTGGGAACCGAGGCTGGCGCTGCGCAGGTGCAGGAAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: VPLTLLPGSRGRPKS*WEPRLALRRCRKWV
Trigger: CACCCACTTCCTGCACCTGCGCAGCGCCAGCCTCGGTTCCCAGCAGCTCTTGGGCCTGCCCCGAGACCCAGGGAGCAGCGTCAGCGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp AGCCATTCCACCTCGGCCACAGGCACCCCCTCCGGCGGGCGGCACTaGAGGAGAACCTCATGGTCCAGGGGCACCTCCTTGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SHSTSATGTPSGGRH*RRTSWSRGTSLPRG
Trigger: GCCTCTGGGCAAGGAGGTGCCCCTGGACCATGAGGTTCTCCTGCAGTGCCGCCCGCCGGAGGGGGTGCCTGTGGCCGAGGTGGAATGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 90 bp TCCCTGGGTCTCGGGGCAGGCCCAAGAGCTGCTGGGAACCGAGGCTaGCGCTGCGCAGGTGCAGGAAGTGGGTGTCCCGGGCGAAATCGC +
Preference number: 5 (lower is better)
Translates to: SLGLGAGPRAAGNRG*RCAGAGSGCPGRNR
Trigger: GCGATTTCGCCCGGGACACCCACTTCCTGCACCTGCGCAGCGCCAGCCTCGGTTCCCAGCAGCTCTTGGGCCTGCCCCGAGACCCAGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp TCCAGCCCAAAGAGCTCCTCCACCTGCTGCCGCGACACCTCGATCTaGACCTCGCGCACCCGCAGGCCGGTGGCCTCATCCAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SSPKSSSTCCRDTSI*TSRTRRPVASSRPS
Trigger: GGAAGGCCTGGATGAGGCCACCGGCCTGCGGGTGCGCGAGGTGCAGATCGAGGTGTCGCGGCAGCAGGTGGAGGAGCTCTTTGGGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 90 bp GCAGAGGGCGGGGGCGAAGACGGCCAGCTGGAGCCGCTTGACTGCTaGGCGGGAATAGGACTCGCCCGTGAACACGTAGGTGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: AEGGGEDGQLEPLDC*AGIGLAREHVGAQL
Trigger: CAGCTGGGCACCTACGTGTTCACGGGCGAGTCCTATTCCCGCTCAGCAGTCAAGCGGCTCCAGCTGGCCGTCTTCGCCCCCGCCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 90 bp TTCTTAGAGTCGAGCAGCGTCCCGCTGCAGTCACGGCCTCCGTTCTaGGGTGGGGGCGCCATGCACTCGCGGCTACGCCAGTGGGCACAC +
Preference number: 5 (lower is better)
Translates to: FLESSSVPLQSRPPF*GGGAMHSRLRQWAH
Trigger: GTGTGCCCACTGGCGTAGCCGCGAGTGCATGGCGCCCCCACCCCAGAACGGAGGCCGTGACTGCAGCGGGACGCTGCTCGACTCTAAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp GCGGCTCTGCTGGCGCTGACGGGAAGGAGTCAGGGAGCACCTCGCTaGCAGAATCAGTGCCTGCTTGGCTCAGCCTCGGGTCCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: AALLALTGRSQGAPR*QNQCLLGSASGPSR
Trigger: TCTGCTGGGACCCGAGGCTGAGCCAAGCAGGCACTGATTCTGGCAGCGAGGTGCTCCCTGACTCCTTCCCGTCAGCGCCAGCAGAGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp ACGGCAGTTGCGGCGGTACACCACCACCCCCACCGCCATGAGGATTaGCACGACCACGAAGATGGCCACCACGAGCCCCGCATACAGCGC +
Preference number: 5 (lower is better)
Translates to: TAVAAVHHHPHRHED*HDHEDGHHEPRIQR
Trigger: GCGCTGTATGCGGGGCTCGTGGTGGCCATCTTCGTGGTCGTGGCAATCCTCATGGCGGTGGGGGTGGTGGTGTACCGCCGCAACTGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp GGCAGGCCCAAGAGCTGCTGGGAACCGAGGCTGGCGCTGCGCAGGTaGAGGAAGTGGGTGTCCCGGGCGAAATCGCTAGGGTATGTGCCA +
Preference number: 5 (lower is better)
Translates to: GRPKSCWEPRLALRR*RKWVSRAKSLGYVP
Trigger: TGGCACATACCCTAGCGATTTCGCCCGGGACACCCACTTCCTGCACCTGCGCAGCGCCAGCCTCGGTTCCCAGCAGCTCTTGGGCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 90 bp GTCCACGCCCCATCGACTGGGCAGATGGTGGTGCAGGCGGTCTTCTaGAATGCCTGGCCCTCGCAGAAGGCCCCTCCGTTGAGTGGAGCG +
Preference number: 5 (lower is better)
Translates to: VHAPSTGQMVVQAVF*NAWPSQKAPPLSGA
Trigger: CGCTCCACTCAACGGAGGGGCCTTCTGCGAGGGCCAGGCATTCCAGAAGACCGCCTGCACCACCATCTGCCCAGTCGATGGGGCGTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCCTGCAGGCTGACCACTaGCTCCACTCCGTCCACGCC +
Preference number: 5 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPLQADH*LHSVHA
Trigger: GGCGTGGACGGAGTGGAGCAAGTGGTCAGCCTGCAG...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 90 bp GTCCTGTGGCTCCTGCAGGAAGTAGGGCAGCGGCTCTGCTGGCGCTaGCGGGAAGGAGTCAGGGAGCACCTCGCTGCCAGAATCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VLWLLQEVGQRLCWR*REGVREHLAARISA
Trigger: GGCACTGATTCTGGCAGCGAGGTGCTCCCTGACTCCTTCCCGTCAGCGCCAGCAGAGCCGCTGCCCTACTTCCTGCAGGAGCCACAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 90 bp CGAAGTCACGGCAGTTGCGGCGGTACACCACCACCCCCACCGCCATaGGGATTGCCACGACCACGAAGATGGCCACCACGAGCCCCGCAT +
Preference number: 5 (lower is better)
Translates to: RSHGSCGGTPPPPPP*GLPRPRRWPPRAPH
Trigger: ATGCGGGGCTCGTGGTGGCCATCTTCGTGGTCGTGGCAATCCTCATGGCGGTGGGGGTGGTGGTGTACCGCCGCAACTGCCGTGACTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 90 bp CCATCGACTGGGCAGATGGTGGTGCAGGCGGTCTTCTGGAATGCCTaGCCCTCGCAGAAGGCCCCTCCGTTGAGTGGAGCGGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PSTGQMVVQAVFWNA*PSQKAPPLSGAGLV
Trigger: CACCAACCCCGCTCCACTCAACGGAGGGGCCTTCTGCGAGGGCCAGGCATTCCAGAAGACCGCCTGCACCACCATCTGCCCAGTCGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 90 bp AAGAGCTGCTGGGAACCGAGGCTGGCGCTGCGCAGGTGCAGGAAGTaGGTGTCCCGGGCGAAATCGCTAGGGTATGTGCCAGGCGGCAAG +
Preference number: 5 (lower is better)
Translates to: KSCWEPRLALRRCRK*VSRAKSLGYVPGGK
Trigger: CTTGCCGCCTGGCACATACCCTAGCGATTTCGCCCGGGACACCCACTTCCTGCACCTGCGCAGCGCCAGCCTCGGTTCCCAGCAGCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCACTGCCTGGAGGTGTaGGGGAAGCGGGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTEHCLEV*GKRAPA
Trigger: GGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGTG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGCACTGCCTGGAGGTGTaGGGGAAGCGGGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLHCLEV*GKRAPA
Trigger: GGCAGGTGCCCGCTTCCCCAACACCTCCAGGCAGTG...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp TCCTCCAAGGCACTCGCCAGGCTGTTGAGGTCCCCATCGTCCTGCTaGAGAGCTTCCCAGAGGTCCAGGATCACACCCGTGGGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: SSKALARLLRSPSSC*RASQRSRITPVGLA
Trigger: AGCGAGCCCCACGGGTGTGATCCTGGACCTCTGGGAAGCTCTGCAGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGCCTTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCAACATCCGCCAGTCATaGCCCCGTGAGTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPNIRQS*PRELGA
Trigger: TGCCCCCAACTCACGGGGCAATGACTGGCGGATGTT...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGAAAGCGGGCACCTGCCTaGCCTGGAGTGCCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: CGREGPPTPALSTPWLYGKRAPA*PGVPRG
Trigger: CCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTT...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 90 bp ATCTCCTCCAAGGCACTCGCCAGGCTGTTGAGGTCCCCATCGTCCTaGTGCAGAGCTTCCCAGAGGTCCAGGATCACACCCGTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: ISSKALARLLRSPSS*CRASQRSRITPVGL
Trigger: GAGCCCCACGGGTGTGATCCTGGACCTCTGGGAAGCTCTGCAGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGCCTTGGAGGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGCTGCAGGCTGACCACTaGCTCCACTCCGTCCACGCC +
Preference number: 5 (lower is better)
Translates to: LDSWPSREHHAALEAAGLLQADH*LHSVHA
Trigger: GGCGTGGACGGAGTGGAGCAAGTGGTCAGCCTGCAG...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTCGAAGTCACGGCAGTaGCGGCGGTACACCACCACC +
Preference number: 5 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLSKSRQ*RRYTTT
Trigger: GGTGGTGGTGTACCGCCGCAACTGCCGTGACTTCGA...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TGCGAGGGGAATGGCACCCCCTGTCACGGCACGTGTGGTCTAGCCTGGTCAGACTGTAGGAGCTGCGGGTaGCTGGGCCTTGCCGTCTTA +
Preference number: 5 (lower is better)
Translates to: CEGNGTPCHGTCGLAWSDCRSCG*LGLAVL
Trigger: TAAGACGGCAAGGCCCAGCAACCCGCAGCTCCTACA...GTCTGACCAGGCTAGACCACACGTGCCGTGACAGGGGGTGCCATTCCCCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCTGGCTGCAAGATCCTaGTCCCAGCCACTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTELAARS*SQPLPG
Trigger: GCCTGGCAGTGGCTGGGACAAGGATCTTGCAGCCAG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGAGAATCAGTGCCTGCTaGGCTCAGCCTCGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLRISAC*AQPRVP
Trigger: TGGGACCCGAGGCTGAGCCAAGCAGGCACTGATTCT...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGCATGGGATGGGCACTTaGGCAGGGAAGGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLHGMGT*AGKAHC
Trigger: GCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATG...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 90 bp GCATCTCACTCTTGCCCATCTCCTCCAAGGCACTCGCCAGGCTGTTaGGGTCCCCATCGTCCTGCTGCAGAGCTTCCCAGAGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: ASHSCPSPPRHSPGC*GPHRPAAELPRGPG
Trigger: TCCTGGACCTCTGGGAAGCTCTGCAGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGCCTTGGAGGAGATGGGCAAGAGTGAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCGCTGTGCCTCCGAAGTaGCGCGACCGCTCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: ERRVIGGACGDQSWETSFAVPPK*RDRSVA
Trigger: CGCCACTGAGCGGTCGCGCAACTTCGGAGGCACAGC...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR CAA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCAGAATCAGTGCCTGCTaGGCTCAGCCTCGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRRISAC*AQPRVP
Trigger: TGGGACCCGAGGCTGAGCCAAGCAGGCACTGATTCT...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTGCCCTCCCCTTCCACTaGCCGCACGCAGATCTTGCA +
Preference number: 5 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRAALPFH*PHADLA
Trigger: TGCAAGATCTGCGTGCGGCAAGTGGAAGGGGAGGGC...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCCAGGGGTCCAGCCCTTaGCCCCACCAAGAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SLDCQATCGHIRACEGNGQGSSP*PHQELP
Trigger: AGGGAGCTCTTGGTGGGGCAAAGGGCTGGACCCCTG...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CTGGATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGTGGCGGATGATGAGGTaGTGGTCGATGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LDSWPSREHHAALEAAGLWRMMR*WSMVSR
Trigger: CCTGCTCACCATCGACCACAACCTCATCATCCGCCA...CAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TGTGGGAGGGAGGGCCCACCCACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATCCAGCAGGTGGCTGTaGGGGTCGCTTAGAGTTTTC +
Preference number: 5 (lower is better)
Translates to: CGREGPPTPALSTPWLYGSSRWL*GSLRVF
Trigger: GAAAACTCTAAGCGACCCCAACAGCCACCTGCTGGA...TCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTGGGTGGGCCCTCCCTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGGGGGCATCTAGGCTGTaGCATATCTTCTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLGASRL*HIFWRM
Trigger: CATCCGCCAGAAGATATGCAACAGCCTAGATGCCCC...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCGCACTCGCCAGGCTGTaGAGGTCCCCATCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: ERRVIGGACGDQSWETSFALARL*RSPSSC
Trigger: GCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGC...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCAGGCAAGTCCTCCTTaGCCCACAGCCAGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: ERRVIGGACGDQSWETSFQASPP*PTARPH
Trigger: GTGCGGCCTGGCTGTGGGCAAAGGAGGACTTGCCTG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCAGGGGTCCAGCCCTTaGCCCCACCAAGAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: ERRVIGGACGDQSWETSFQGSSP*PHQELP
Trigger: AGGGAGCTCTTGGTGGGGCAAAGGGCTGGACCCCTG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGCTTGCCGTCTTAAAGTaGACGGGGTGGAAACCACCA +
Preference number: 5 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTELAVLK*TGWKPP
Trigger: TGGTGGTTTCCACCCCGTCAACTTTAAGACGGCAAG...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCTTGGTCATGGGGATTTaGTCGGTGGAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRLVMGI*SVESCR
Trigger: CCTGCAGGACTCCACCGACAAAATCCCCATGACCAA...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAGCCCTCCCCTTCCACTaGCCGCACGCAGATCTTGCA +
Preference number: 5 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIALPFH*PHADLA
Trigger: TGCAAGATCTGCGTGCGGCAAGTGGAAGGGGAGGGC...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGACCAGCATCTCACTCTaGCCCATCTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: DSWPSREHHAALEAAGLRTSISL*PISSKA
Trigger: TGCCTTGGAGGAGATGGGCAAGAGTGAGATGCTGGT...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGAAGGCTCACTGCCTTaGTCTGAGGCAGCATCCACA +
Preference number: 5 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTREGSLP*SEAAST
Trigger: TGTGGATGCTGCCTCAGACAAAGGCAGTGAGCCTTC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 90 bp AGGAGCTGCGGGTTGCTGGGCCTTGCCGTCTTAAAGTTGACGGGGTaGAAACCACCAGTCAGGGCAGCAGATGAGTCAGTGATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: RSCGLLGLAVLKLTG*KPPVRAADESVMSV
Trigger: CACAGACATCACTGACTCATCTGCTGCCCTGACTGGTGGTTTCCACCCCGTCAACTTTAAGACGGCAAGGCCCAGCAACCCGCAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 90 bp AGGAGGCCTGTGGGTCCACAGGTCACCGAGGGGCTCAATACTGTCTaGGTCCCTTCTGAAAGCGGGAGGGTACTTTCTGCCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: RRPVGPQVTEGLNTV*VPSESGRVLSALLM
Trigger: CATCAACAAGGCAGAAAGTACCCTCCCGCTTTCAGAAGGGACCCAGACAGTATTGAGCCCCTCGGTGACCTGTGGACCCACAGGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCATGACATCCTCATTCTaGAGCCATTCCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRMTSSF*SHSTSA
Trigger: GGCCGAGGTGGAATGGCTCAAGAATGAGGATGTCAT...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGTGCCGCACGCAGATCTaGCAGGTGAGCTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVCRTQI*QVSSVE
Trigger: CTCCACAGAGCTCACCTGCAAGATCTGCGTGCGGCA...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCTGCCGCACGCAGATCTaGCAGGTGAGCTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ERRVIGGACGDQSWETSFCRTQI*QVSSVE
Trigger: CTCCACAGAGCTCACCTGCAAGATCTGCGTGCGGCA...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTGCACTCGCCAGGCTGTaGAGGTCCCCATCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QTDGVGKAFLGISHRADGALARL*RSPSSC
Trigger: GCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGC...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCCATGGGATGGGCACTTaGGCAGGGAAGGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: ERRVIGGACGDQSWETSFHGMGT*AGKAHC
Trigger: GCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATG...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGCACGTAGAAGATACATaGACTGACCCTGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLHVEDT*TDPVGS
Trigger: TGAGCCCACAGGGTCAGTCAATGTATCTTCTACGTG...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGTGGCGGATGATGAGGTaGTGGTCGATGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVWRMMR*WSMVSR
Trigger: CCTGCTCACCATCGACCACAACCTCATCATCCGCCA...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGTGTAGGAGCTGCGGGTaGCTGGGCCTTGCCGTCTTA +
Preference number: 5 (lower is better)
Translates to: GISHRADGLNPPRRLQPMCRSCG*LGLAVL
Trigger: TAAGACGGCAAGGCCCAGCAACCCGCAGCTCCTACA...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGGATCTCCTGGTATTaGGCCAGCAGCTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVGISWY*ASSLLL
Trigger: GAGGAGCAAGCTGCTGGCCAAATACCAGGAGATCCC...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGAAGAGGGAGAGGCCTTaGAAGAGGCCTCTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVKRERP*KRPLCW
Trigger: CCAGCACAGAGGCCTCTTCAAAGGCCTCTCCCTCTT...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGAGGAGGGTTATAGGAGGTGCCTGTGGAGATCAGAGCTGGGAAACCAGCTTCAAGAGGGAGAGGCCTTaGAAGAGGCCTCTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ERRVIGGACGDQSWETSFKRERP*KRPLCW
Trigger: CCAGCACAGAGGCCTCTTCAAAGGCCTCTCCCTCTT...GAAGCTGGTTTCCCAGCTCTGATCTCCACAGGCACCTCCTATAACCCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATAAGCGGGCACCTGCCTaGCCTGGAGTGCCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: SPEKAVICLKSHSSLMADKRAPA*PGVPRG
Trigger: CCCTCTTGGCACTCCAGGCAAGGCAGGTGCCCGCTT...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp ACCAGGGTCGAAAGCCTTAGTCTCAGCCTCCGGGCCCAGCCAGAGCCTAGCCCCTGGCAGATTTGCAAGTaGATTCTTGGTCTTTGGACT +
Preference number: 5 (lower is better)
Translates to: TRVESLSLSLRAQPEPSPWQICK*ILGLWT
Trigger: AGTCCAAAGACCAAGAATCAACTTGCAAATCTGCCA...GGGGCTAGGCTCTGGCTGGGCCCGGAGGCTGAGACTAAGGCTTTCGACCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAGGGGCATCTAGGCTGTaGCATATCTTCTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: EIRAGKPASQPPSPLLGIGASRL*HIFWRM
Trigger: CATCCGCCAGAAGATATGCAACAGCCTAGATGCCCC...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGTCATTGCCCCGTGAGTaGGGGGCATCTAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GISHRADGLNPPRRLQPMSLPRE*GASRLL
Trigger: CAACAGCCTAGATGCCCCCAACTCACGGGGCAATGA...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGAACATCCGCCAGTCATaGCCCCGTGAGTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGNIRQS*PRELGA
Trigger: TGCCCCCAACTCACGGGGCAATGACTGGCGGATGTT...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTCAGGCAAGTCCTCCTTaGCCCACAGCCAGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIQASPP*PTARPH
Trigger: GTGCGGCCTGGCTGTGGGCAAAGGAGGACTTGCCTG...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CAACCCTGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGATGACATCCTCATTCTaGAGCCATTCCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: QPCPLGKVISDLSDRSGVMTSSF*SHSTSA
Trigger: GGCCGAGGTGGAATGGCTCAAGAATGAGGATGTCAT...CACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCAGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTTCGAAGTCACGGCAGTaGCGGCGGTACACCACCACC +
Preference number: 5 (lower is better)
Translates to: HSSPQHSLALWIQHLLKISKSRQ*RRYTTT
Trigger: GGTGGTGGTGTACCGCCGCAACTGCCGTGACTTCGA...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGTTGGTCATGGGGATTTaGTCGGTGGAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GISHRADGLNPPRRLQPMLVMGI*SVESCR
Trigger: CCTGCAGGACTCCACCGACAAAATCCCCATGACCAA...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACGGCACGTGTGGTCTAGCCTGGTCAGACTGCCCTCAAAGCCACGTGACCGAGTGTTTTTCTTCTTCTTaGAGCCTTACTAGCGGTCTG +
Preference number: 5 (lower is better)
Translates to: HGTCGLAWSDCPQSHVTECFSSS*SLTSGL
Trigger: CAGACCGCTAGTAAGGCTCAAAGAAGAAGAAAAACA...CTCGGTCACGTGGCTTTGAGGGCAGTCTGACCAGGCTAGACCACACGTGCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TGGTTCCTGCACAGAGATCTCAGGCCAAGAGAGAGAGAGCGGGGGTGGAGAAGGGGGGAAACTGAGGCCTaGTCAGAATTTAGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: WFLHRDLRPRERERGWRRGETEA*SEFSPR
Trigger: TCTTGGACTAAATTCTGACAAGGCCTCAGTTTCCCC...CCTTCTCCACCCCCGCTCTCTCTCTCTTGGCCTGAGATCTCTGTGCAGGAACCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGCATAGAGCTGATGGTTaGAACCCTCCCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GISHRADGLNPPRRLQPMHRADG*NPPRRL
Trigger: GAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATG...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TCCGAGGGGCATCCTGATGTGCCCACAGAGAAAAGCATAGGCACGCACACGCGCGTACTTTCTGCCTTGTaGATGAGTAGATACATCTCG +
Preference number: 5 (lower is better)
Translates to: SEGHPDVPTEKSIGTHTRVLSAL*MSRYIS
Trigger: CGAGATGTATCTACTCATCAACAAGGCAGAAAGTAC...GCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACATCAGGATGCCCCTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATTCATTGCCCCGTGAGTaGGGGGCATCTAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SPEKAVICLKSHSSLMADSLPRE*GASRLL
Trigger: CAACAGCCTAGATGCCCCCAACTCACGGGGCAATGA...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTACCAGCATCTCACTCTaGCCCATCTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: QTDGVGKAFLGISHRADGTSISL*PISSKA
Trigger: TGCCTTGGAGGAGATGGGCAAGAGTGAGATGCTGGT...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCGTTGATTCTTGGTCTTaGGACTGCCAGGCTACATGT +
Preference number: 5 (lower is better)
Translates to: SLDCQATCGHIRACEGNGVDSWS*DCQATC
Trigger: ACATGTAGCCTGGCAGTCCAAAGACCAAGAATCAAC...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GATTCCTGGCCATCAAGAGAGCACCACGCTGCTCTAGAGGCTGCTGGGCTGAGGTGGCAGATTTGCAAGTaGATTCTTGGTCTTTGGACT +
Preference number: 5 (lower is better)
Translates to: DSWPSREHHAALEAAGLRWQICK*ILGLWT
Trigger: AGTCCAAAGACCAAGAATCAACTTGCAAATCTGCCA...CCTCAGCCCAGCAGCCTCTAGAGCAGCGTGGTGCTCTCTTGATGGCCAGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTGGGATCTCCTGGTATTaGGCCAGCAGCTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIGISWY*ASSLLL
Trigger: GAGGAGCAAGCTGCTGGCCAAATACCAGGAGATCCC...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp ATAACCATGTCCACAGACCTGGCAGGGGTCCAGCCCTTTGCCCCACCAAGAGCTCTTTCCTTTGCCTTTTaGCTTTTGGACAGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: ITMSTDLAGVQPFAPPRALSFAF*LLDRRK
Trigger: CTTTCTCCTGTCCAAAAGCAAAAAGGCAAAGGAAAG...AGCTCTTGGTGGGGCAAAGGGCTGGACCCCTGCCAGGTCTGTGGACATGGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GTGAGGCCGAGCCCATGGGATGGGCACTTTGGCAGGGAAGGCTCACTGCCTTTGTGGATAATAAATCGTTaGCGTTTCCTAAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: VRPSPWDGHFGREGSLPLWIINR*RFLRNW
Trigger: CCAGTTTCTTAGGAAACGCAAACGATTTATTATCCA...CAAAGGCAGTGAGCCTTCCCTGCCAAAGTGCCCATCCCATGGGCTCGGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGGTTGATTCTTGGTCTTaGGACTGCCAGGCTACATGT +
Preference number: 5 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEVDSWS*DCQATC
Trigger: ACATGTAGCCTGGCAGTCCAAAGACCAAGAATCAAC...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GGGGGTGGAGAAGGAACTCTGGGCCCTCTAACAACAGAGTACATGGATTTTCTACATAGAGCTGATGGTTaGAACCCTCCCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GGGEGTLGPLTTEYMDFLHRADG*NPPRRL
Trigger: GAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATG...TAGAAAATCCATGTACTCTGTTGTTAGAGGGCCCAGAGTTCCTTCTCCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp AGCCCAGAGAAGGCAGTGATATGCCTGAAGTCGCACAGCAGTTTAATGGCAGATCTTGCCGTCTTAAAGTaGACGGGGTGGAAACCACCA +
Preference number: 5 (lower is better)
Translates to: SPEKAVICLKSHSSLMADLAVLK*TGWKPP
Trigger: TGGTGGTTTCCACCCCGTCAACTTTAAGACGGCAAG...ATCTGCCATTAAACTGCTGTGCGACTTCAGGCATATCACTGCCTTCTCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TCTTTGGACTGCCAGGCTACATGTGGGCACATTAGAGCCTGCGAGGGGAATGGCTGTTTTTCTTCTTCTTaGAGCCTTACTAGCGGTCTG +
Preference number: 5 (lower is better)
Translates to: SLDCQATCGHIRACEGNGCFSSS*SLTSGL
Trigger: CAGACCGCTAGTAAGGCTCAAAGAAGAAGAAAAACA...GCCATTCCCCTCGCAGGCTCTAATGTGCCCACATGTAGCCTGGCAGTCCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGAGCCCTCAGCACTCCTaGGCTTTATGGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGSPQHS*ALWIQH
Trigger: ATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCT...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTGAAGGCTCACTGCCTTaGTCTGAGGCAGCATCCACA +
Preference number: 5 (lower is better)
Translates to: HSSPQHSLALWIQHLLKIEGSLP*SEAAST
Trigger: TGTGGATGCTGCCTCAGACAAAGGCAGTGAGCCTTC...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp ATAGGTTGCAGTTTACAGAATAAACAGAGGTGGGATTGGGGGCCATCCCTGGGGCACGTAGAAGATACATaGACTGACCCTGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: IGCSLQNKQRWDWGPSLGHVEDT*TDPVGS
Trigger: TGAGCCCACAGGGTCAGTCAATGTATCTTCTACGTG...CCCCAGGGATGGCCCCCAATCCCACCTCTGTTTATTCTGTAAACTGCAACCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp TGCCCACTGGGAAAGGTTATTTCAGATCTCTCAGACCGTAGCGGGGTGGGTGAGGTACTTTCTGCCTTGTaGATGAGTAGATACATCTCG +
Preference number: 5 (lower is better)
Translates to: CPLGKVISDLSDRSGVGEVLSAL*MSRYIS
Trigger: CGAGATGTATCTACTCATCAACAAGGCAGAAAGTAC...CTCACCCACCCCGCTACGGTCTGAGAGATCTGAAATAACCTTTCCCAGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GAGATCAGAGCTGGGAAACCAGCTTCTCAGCCTCCTTCTCCACTCCTGGGCATAAGCAGTTTGTCTGAATaGTACTTGACTCTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: EIRAGKPASQPPSPLLGISSLSE*YLTLQR
Trigger: TCTTTGAAGAGTCAAGTACAATTCAGACAAACTGCT...TATGCCCAGGAGTGGAGAAGGAGGCTGAGAAGCTGGTTTCCCAGCTCTGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGACAGGAGAAAGCAGTTaGTCTGAATTGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: GISHRADGLNPPRRLQPMTGESS*SELYLT
Trigger: AGTCAAGTACAATTCAGACAAACTGCTTTCTCCTGT...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp GGCATTTCTCATAGAGCTGATGGTTTGAACCCTCCCAGGAGGCTCCAGCCAATGAGCAGTTTGTCTGAATaGTACTTGACTCTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: GISHRADGLNPPRRLQPMSSLSE*YLTLQR
Trigger: TCTTTGAAGAGTCAAGTACAATTCAGACAAACTGCT...CATTGGCTGGAGCCTCCTGGGAGGGTTCAAACCATCAGCTCTATGAGAAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CAGACGGATGGAGTCGGCAAAGCCTTTCTGGGCATTTCTCATAGAGCTGATGGTACAGGAGAAAGCAGTTaGTCTGAATTGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: QTDGVGKAFLGISHRADGTGESS*SELYLT
Trigger: AGTCAAGTACAATTCAGACAAACTGCTTTCTCCTGT...ACCATCAGCTCTATGAGAAATGCCCAGAAAGGCTTTGCCGACTCCATCCGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS-3UTR CAA 90 bp CACTCCAGCCCTCAGCACTCCTTGGCTTTATGGATTCAGCATCTGCTTAAGATTCTTTCCTTTGCCTTTTaGCTTTTGGACAGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: HSSPQHSLALWIQHLLKILSFAF*LLDRRK
Trigger: CTTTCTCCTGTCCAAAAGCAAAAAGGCAAAGGAAAG...AATCTTAAGCAGATGCTGAATCCATAAAGCCAAGGAGTGCTGAGGGCTGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 72 bp CGCTGCGCGGAGGGCCGCCTGGCACTCGGAGCGCGGTaGGTGCCTGGCGCCGGCTCTCGAACGAGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: RCAEGRLALGAR*VPGAGSRTRLR
Trigger: CCGGAGCCTCGTTCGAGAGCCGGCGCCAGGCACCCACCGCGCTCCGAGTGCCAGGCGGCCCTCCGCGCAGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS GCA 72 bp AGCCCGTGCCTTCCGTGGGGGCAGCGGAAGCCACGCTaGGCGGAGGGCCGCCTGGCACTCGGAGCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: SPCLPWGQRKPR*AEGRLALGARW
Trigger: CCACCGCGCTCCGAGTGCCAGGCGGCCCTCCGCGCAGCGTGGCTTCCGCTGCCCCCACGGAAGGCACGGGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS GCA 72 bp AGCGCTCGCCTGGCTCCGGCGCTGTGCCTCCGAAGTTaGGCGACCGCTCAGTGGCGCTCGCAGCGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: SARLAPALCLRS*ATAQWRSQRRR
Trigger: GCGCCGCCGCTGCGAGCGCCACTGAGCGGTCGCGCAACTTCGGAGGCACAGCGCCGGAGCCAGGCGAGCGCT
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS CAA 72 bp GAGCGCTCGCCTGGCTCCGGCGCTGTGCCTCCGAAGTaGCGCGACCGCTCAGTGGCGCTCGCAGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: ERSPGSGAVPPK*RDRSVALAAAA
Trigger: CGCCGCCGCTGCGAGCGCCACTGAGCGGTCGCGCAACTTCGGAGGCACAGCGCCGGAGCCAGGCGAGCGCTC
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS GCA 72 bp TGCTTGGCTCAGCCTCGGGTCCCAGCAGAGCAGCAGTaGCAGCAGCAGCGCGCCCCGAGCTCCGCTCCGGGC +
Preference number: 6 (lower is better)
Translates to: CLAQPRVPAEQQ*QQQRAPSSAPG
Trigger: GCCCGGAGCGGAGCTCGGGGCGCGCTGCTGCTGGCACTGCTGCTCTGCTGGGACCCGAGGCTGAGCCAAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp TCCGGGTCTCTGAGCGCTCGCCTGGCTCCGGCGCTGTaGCTCCGAAGTTGCGCGACCGCTCAGTGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: SGSLSARLAPAL*LRSCATAQWRS
Trigger: CGAGCGCCACTGAGCGGTCGCGCAACTTCGGAGGCACAGCGCCGGAGCCAGGCGAGCGCTCAGAGACCCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335350.10
CDS GCA 72 bp ACGCTGCTCCCTGGGTCTCGGGGCAGGCCCAAGAGCTaGTGGGAACCGAGGCTGGCGCTGCGCAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: TLLPGSRGRPKS*WEPRLALRRCR
Trigger: CCTGCACCTGCGCAGCGCCAGCCTCGGTTCCCAGCAGCTCTTGGGCCTGCCCCGAGACCCAGGGAGCAGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 72 bp TCGAGCAGCGTCCCGCTGCAGTCACGGCCTCCGTTCTaGGGTGGGGGCGCCATGCACTCGCGGCTACGCCAG +
Preference number: 6 (lower is better)
Translates to: SSSVPLQSRPPF*GGGAMHSRLRQ
Trigger: CTGGCGTAGCCGCGAGTGCATGGCGCCCCCACCCCAGAACGGAGGCCGTGACTGCAGCGGGACGCTGCTCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp ACCTCGGCCACAGGCACCCCCTCCGGCGGGCGGCACTaGAGGAGAACCTCATGGTCCAGGGGCACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: TSATGTPSGGRH*RRTSWSRGTSL
Trigger: CAAGGAGGTGCCCCTGGACCATGAGGTTCTCCTGCAGTGCCGCCCGCCGGAGGGGGTGCCTGTGGCCGAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp AAGAGCTCCTCCACCTGCTGCCGCGACACCTCGATCTaGACCTCGCGCACCCGCAGGCCGGTGGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: KSSSTCCRDTSI*TSRTRRPVASS
Trigger: GGATGAGGCCACCGGCCTGCGGGTGCGCGAGGTGCAGATCGAGGTGTCGCGGCAGCAGGTGGAGGAGCTCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp TGCAGTCACGGCCTCCGTTCTGGGGTGGGGGCGCCATaGACTCGCGGCTACGCCAGTGGGCACACTCAGTGC +
Preference number: 6 (lower is better)
Translates to: CSHGLRSGVGAP*TRGYASGHTQC
Trigger: GCACTGAGTGTGCCCACTGGCGTAGCCGCGAGTGCATGGCGCCCCCACCCCAGAACGGAGGCCGTGACTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp GCGGCGGTACACCACCACCCCCACCGCCATGAGGATTaGCACGACCACGAAGATGGCCACCACGAGCCCCGC +
Preference number: 6 (lower is better)
Translates to: AAVHHHPHRHED*HDHEDGHHEPR
Trigger: GCGGGGCTCGTGGTGGCCATCTTCGTGGTCGTGGCAATCCTCATGGCGGTGGGGGTGGTGGTGTACCGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 72 bp ACCCAGGCAGCCAAAGGTGCCGCTGACGCTGCTCCCTaGGTCTCGGGGCAGGCCCAAGAGCTGCTGGGAACC +
Preference number: 6 (lower is better)
Translates to: TQAAKGAADAAP*VSGQAQELLGT
Trigger: GGTTCCCAGCAGCTCTTGGGCCTGCCCCGAGACCCAGGGAGCAGCGTCAGCGGCACCTTTGGCTGCCTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 72 bp CTCCTGCAGGAAGTAGGGCAGCGGCTCTGCTGGCGCTaGCGGGAAGGAGTCAGGGAGCACCTCGCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: LLQEVGQRLCWR*REGVREHLAAR
Trigger: TCTGGCAGCGAGGTGCTCCCTGACTCCTTCCCGTCAGCGCCAGCAGAGCCGCTGCCCTACTTCCTGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp AAGAGCTGCTGGGAACCGAGGCTGGCGCTGCGCAGGTaGAGGAAGTGGGTGTCCCGGGCGAAATCGCTAGGG +
Preference number: 6 (lower is better)
Translates to: KSCWEPRLALRR*RKWVSRAKSLG
Trigger: CCCTAGCGATTTCGCCCGGGACACCCACTTCCTGCACCTGCGCAGCGCCAGCCTCGGTTCCCAGCAGCTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 72 bp GGGCAGATGGTGGTGCAGGCGGTCTTCTGGAATGCCTaGCCCTCGCAGAAGGCCCCTCCGTTGAGTGGAGCG +
Preference number: 6 (lower is better)
Translates to: GQMVVQAVFWNA*PSQKAPPLSGA
Trigger: CGCTCCACTCAACGGAGGGGCCTTCTGCGAGGGCCAGGCATTCCAGAAGACCGCCTGCACCACCATCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 72 bp GGGGGCGAAGACGGCCAGCTGGAGCCGCTTGACTGCTaGGCGGGAATAGGACTCGCCCGTGAACACGTAGGT +
Preference number: 6 (lower is better)
Translates to: GGEDGQLEPLDC*AGIGLAREHVG
Trigger: ACCTACGTGTTCACGGGCGAGTCCTATTCCCGCTCAGCAGTCAAGCGGCTCCAGCTGGCCGTCTTCGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 72 bp GGCCACCACGAGCCCCGCATACAGCGCCGCATCCCCTaGGGCCTCCAGCATTTGCATGCACAGCCCATCTGT +
Preference number: 6 (lower is better)
Translates to: GHHEPRIQRRIP*GLQHLHAQPIC
Trigger: ACAGATGGGCTGTGCATGCAAATGCTGGAGGCCTCAGGGGATGCGGCGCTGTATGCGGGGCTCGTGGTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373192.4
CDS GCA 72 bp CTGGCGCTGACGGGAAGGAGTCAGGGAGCACCTCGCTaGCAGAATCAGTGCCTGCTTGGCTCAGCCTCGGGT +
Preference number: 6 (lower is better)
Translates to: LALTGRSQGAPR*QNQCLLGSASG
Trigger: ACCCGAGGCTGAGCCAAGCAGGCACTGATTCTGGCAGCGAGGTGCTCCCTGACTCCTTCCCGTCAGCGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp GACTGGGCAGATGGTGGTGCAGGCGGTCTTCTGGAATaGCTGGCCCTCGCAGAAGGCCCCTCCGTTGAGTGG +
Preference number: 6 (lower is better)
Translates to: DWADGGAGGLLE*LALAEGPSVEW
Trigger: CCACTCAACGGAGGGGCCTTCTGCGAGGGCCAGGCATTCCAGAAGACCGCCTGCACCACCATCTGCCCAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp GCACTCGCCAGGCTGTTGAGGTCCCCATCGTCCTGCTaGAGAGCTTCCCAGAGGTCCAGGATCACACCCGTG +
Preference number: 6 (lower is better)
Translates to: ALARLLRSPSSC*RASQRSRITPV
Trigger: CACGGGTGTGATCCTGGACCTCTGGGAAGCTCTGCAGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 72 bp TCCTCCCAGTGGCCCTGGTGGGCCTGGGTCTTGAGCTaGAAGATCCAGTCACGGGCACTGACTTCGGCACAG +
Preference number: 6 (lower is better)
Translates to: SSQWPWWAWVLS*KIQSRALTSAQ
Trigger: CTGTGCCGAAGTCAGTGCCCGTGACTGGATCTTTCAGCTCAAGACCCAGGCCCACCAGGGCCACTGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 72 bp GTGTCCGACAGGCGGGCCTGGCGGATGATGAGGTTGTaGTCGATGGTGAGCAGGAAGTTGGTGTCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: VSDRRAWRMMRL*SMVSRKLVSWV
Trigger: CACCCAGGACACCAACTTCCTGCTCACCATCGACCACAACCTCATCATCCGCCAGGCCCGCCTGTCGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CAA 72 bp GCAGTGTCCGACAGGCGGGCCTGGCGGATGATGAGGTaGTGGTCGATGGTGAGCAGGAAGTTGGTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: AVSDRRAWRMMR*WSMVSRKLVSW
Trigger: CCAGGACACCAACTTCCTGCTCACCATCGACCACAACCTCATCATCCGCCAGGCCCGCCTGTCGGACACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CAA 72 bp CTCTTGCCCATCTCCTCCAAGGCACTCGCCAGGCTGTaGAGGTCCCCATCGTCCTGCTGCAGAGCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: LLPISSKALARL*RSPSSCCRASQ
Trigger: CTGGGAAGCTCTGCAGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGCCTTGGAGGAGATGGGCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CAA 90 bp AGGGCAGCAGATGAGTCAGTGATGTCTGTGTCGAAGTCACGGCAGTaGCGGCGGTACACCACCACCCCCACCGCCATGAGGATTGCCACG +
Preference number: 6 (lower is better)
Translates to: RAADESVMSVSKSRQ*RRYTTTPTAMRIAT
Trigger: CGTGGCAATCCTCATGGCGGTGGGGGTGGTGGTGTACCGCCGCAACTGCCGTGACTTCGACACAGACATCACTGACTCATCTGCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CAA 90 bp AGCATCTCACTCTTGCCCATCTCCTCCAAGGCACTCGCCAGGCTGTaGAGGTCCCCATCGTCCTGCTGCAGAGCTTCCCAGAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SISLLPISSKALARL*RSPSSCCRASQRSR
Trigger: CCTGGACCTCTGGGAAGCTCTGCAGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGCCTTGGAGGAGATGGGCAAGAGTGAGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 72 bp TCTTGCCCATCTCCTCCAAGGCACTCGCCAGGCTGTTaGGGTCCCCATCGTCCTGCTGCAGAGCTTCCCAGA +
Preference number: 6 (lower is better)
Translates to: SCPSPPRHSPGC*GPHRPAAELPR
Trigger: TCTGGGAAGCTCTGCAGCAGGACGATGGGGACCTCAACAGCCTGGCGAGTGCCTTGGAGGAGATGGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CAA 72 bp GATGAGTCAGTGATGTCTGTGTCGAAGTCACGGCAGTaGCGGCGGTACACCACCACCCCCACCGCCATGAGG +
Preference number: 6 (lower is better)
Translates to: DESVMSVSKSRQ*RRYTTTPTAMR
Trigger: CCTCATGGCGGTGGGGGTGGTGGTGTACCGCCGCAACTGCCGTGACTTCGACACAGACATCACTGACTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 72 bp GTGGGTCCACAGGTCACCGAGGGGCTCAATACTGTCTaGGTCCCTTCTGAAAGCGGGAGGGTACTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: VGPQVTEGLNTV*VPSESGRVLSA
Trigger: GGCAGAAAGTACCCTCCCGCTTTCAGAAGGGACCCAGACAGTATTGAGCCCCTCGGTGACCTGTGGACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS TCA 72 bp GGTGGAAACCACCAGTCAGGGCAGCAGATGAGTCAGTaGTGTCTGTGTCGAAGTCACGGCAGTTGCGGCGGT +
Preference number: 6 (lower is better)
Translates to: GGNHQSGQQMSQ*CLCRSHGSCGG
Trigger: ACCGCCGCAACTGCCGTGACTTCGACACAGACATCACTGACTCATCTGCTGCCCTGACTGGTGGTTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS GCA 72 bp GATAGAAGGGGATCTCCTGGTATTTGGCCAGCAGCTTaGTCCTCCAATGGGCATGGGGGAGGTCATGGAGGG +
Preference number: 6 (lower is better)
Translates to: DRRGSPGIWPAA*SSNGHGGGHGG
Trigger: CCCTCCATGACCTCCCCCATGCCCATTGGAGGAGCAAGCTGCTGGCCAAATACCAGGAGATCCCCTTCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CCA 72 bp GGGTTGCTGGGCCTTGCCGTCTTAAAGTTGACGGGGTaGAAACCACCAGTCAGGGCAGCAGATGAGTCAGTG +
Preference number: 6 (lower is better)
Translates to: GLLGLAVLKLTG*KPPVRAADESV
Trigger: CACTGACTCATCTGCTGCCCTGACTGGTGGTTTCCACCCCGTCAACTTTAAGACGGCAAGGCCCAGCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4
CDS CAA 72 bp CAGTCATTGCCCCGTGAGTTGGGGGCATCTAGGCTGTaGCATATCTTCTGGCGGATGGACAGTGGGATCTTG +
Preference number: 6 (lower is better)
Translates to: QSLPRELGASRL*HIFWRMDSGIL
Trigger: CAAGATCCCACTGTCCATCCGCCAGAAGATATGCAACAGCCTAGATGCCCCCAACTCACGGGGCAATGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335350.10
ENST00000373192.4