RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC45B (Homo sapiens)

Ensembl gene IDs: ENSG00000141161

Ensembl transcript IDs: ENST00000268876.9, ENST00000394570.7, ENST00000591048.2

Found 572 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATACCGCAACAGTGCAACTCTCTGATAGTCTGTCCCTTTTCCAGCTaGTGTCCCAGGCATATGTACACTTACATTTATTACACAACGGAA +
Preference number: 1 (lower is better)
Translates to: IPQQCNSLIVCPFSS*CPRHMYTYIYYTTE
Trigger: TTCCGTTGTGTAATAAATGTAAGTGTACATATGCCTGGGACATCAGCTGGAAAAGGGACAGACTATCAGAGAGTTGCACTGTTGCGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CCA 90 bp CTGCAGGTGAAACACACAGTTCTGAACAGACTGATTCAAATAGTGTaGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACA +
Preference number: 1 (lower is better)
Translates to: LQVKHTVLNRLIQIV*ERGHENSTDQHPNT
Trigger: TGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCACACTATTTGAATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR TCA 90 bp ACAATCAAGTCTTTCCTTTATATTGAGACTTCATTGTCACTGCTATaGTCCCTAGATGACCTGACTCTTCAGGAGAACCCAACCAACCCA +
Preference number: 1 (lower is better)
Translates to: TIKSFLYIETSLSLL*SLDDLTLQENPTNP
Trigger: TGGGTTGGTTGGGTTCTCCTGAAGAGTCAGGTCATCTAGGGATCATAGCAGTGACAATGAAGTCTCAATATAAAGGAAAGACTTGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR GCA 90 bp GTATTCATCATGTCCATCTTGCTTGGAAGACTTTCCCAAGCAAATTaGAGAGGTCATGCCCCACTGTTGAACATAAACTCTATTTCCATC +
Preference number: 1 (lower is better)
Translates to: VFIMSILLGRLSQAN*RGHAPLLNINSISI
Trigger: GATGGAAATAGAGTTTATGTTCAACAGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAGTCTTCCAAGCAAGATGGACATGATGAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR GCA 90 bp ATTCTTTTGTGGCCAAGCCTGACATACAGAATATGTTCTTTGATCTaGCCAGGGTACATTCTTTTGTGGTGGCACACCTCTTCCATTAAT +
Preference number: 1 (lower is better)
Translates to: ILLWPSLTYRICSLI*PGYILLWWHTSSIN
Trigger: ATTAATGGAAGAGGTGTGCCACCACAAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGCCACAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CCA 90 bp ACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGTaGTGGCACACCTCTTCCATTAATACCCCTAATCAGTCCATGTCA +
Preference number: 1 (lower is better)
Translates to: TYRICSLICPGYILL*WHTSSINTPNQSMS
Trigger: TGACATGGACTGATTAGGGGTATTAATGGAAGAGGTGTGCCACCACAAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR TCA 90 bp CACAGTTCTGAACAGACTGATTCAAATAGTGTGGGAGAGAGGTCATaGAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTT +
Preference number: 1 (lower is better)
Translates to: HSSEQTDSNSVGERS*KQHRSASKYNSINL
Trigger: AAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCACACTATTTGAATCAGTCTGTTCAGAACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR TCA 90 bp GACATAGACATATCAGAGTCATCCCTGGGAACTTTGCCGGGTTATTaGGAATGCTCTTCTCTCTTCTATTCCATAATGAACTATAACAAC +
Preference number: 1 (lower is better)
Translates to: DIDISESSLGTLPGY*ECSSLFYSIMNYNN
Trigger: GTTGTTATAGTTCATTATGGAATAGAAGAGAGAAGAGCATTCTCAATAACCCGGCAAAGTTCCCAGGGATGACTCTGATATGTCTATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGAATGGGCATGGGACTaGGACAGAGCACTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISEWAWD*DRALQV
Trigger: CACCTGCAGTGCTCTGTCCCAGTCCCATGCCCATTC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGTGGGAGAGAGGTCATaGAAACAGCACAGATCAGCA +
Preference number: 2 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDVGERS*KQHRSA
Trigger: TGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCAC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCACAGGGAGAGAGCCTaGCAGGGAATGAGACAAACC +
Preference number: 2 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPHRERA*QGMRQT
Trigger: GGTTTGTCTCATTCCCTGGCAGGCTCTCTCCCTGTG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACACAGGGAGAGAGCCTaGCAGGGAATGAGACAAACC +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPHRERA*QGMRQT
Trigger: GGTTTGTCTCATTCCCTGGCAGGCTCTCTCCCTGTG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAACAACTATGTCACCCTaGGGCTGCTGGGGACTCTCT +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPTTMSP*GCWGLS
Trigger: AGAGAGTCCCCAGCAGCCCCAGGGTGACATAGTTGT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGATGTCACCCTGGGGCTaGTGGGGACTCTCTTTCCTA +
Preference number: 2 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKMSPWG*WGLSFL
Trigger: TAGGAAAGAGAGTCCCCAGCAGCCCCAGGGTGACAT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAAGTAGAAAGATCACTTaGGCCCAGGAGACCAAGGCT +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPSRKIT*AQETKA
Trigger: AGCCTTGGTCTCCTGGGCTCAAGTGATCTTTCTACT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGATGTCAGACCTTCCCTaGGTGGCCAAGATACATGAG +
Preference number: 2 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPMSDLP*VAKIHE
Trigger: CTCATGTATCTTGGCCACCCAGGGAAGGTCTGACAT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAATGTCAGACCTTCCCTaGGTGGCCAAGATACATGAG +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPMSDLP*VAKIHE
Trigger: CTCATGTATCTTGGCCACCCAGGGAAGGTCTGACAT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATCACCCTGGGGCTGCTaGGGACTCTCTTTCCTATCA +
Preference number: 2 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKSPWGC*GLSFLS
Trigger: TGATAGGAAAGAGAGTCCCCAGCAGCCCCAGGGTGA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGCTATGATCCCTAGATaGCCTGACTCTTCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPAMIPR*PDSSGE
Trigger: TTCTCCTGAAGAGTCAGGTCATCTAGGGATCATAGC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCTTTCCCAAGCAAATTaGAGAGGTCATGCCCCACTG +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKELSQAN*RGHAPL
Trigger: CAGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACATCCCTGGGAACTTTaGCGGGTTATTGAGAATGCT +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPHPWEL*RVIENA
Trigger: AGCATTCTCAATAACCCGGCAAAGTTCCCAGGGATG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACCCATACCGCAACAGTaGAACTCTCTGATAGTCTGT +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPPIPQQ*NSLIVC
Trigger: ACAGACTATCAGAGAGTTGCACTGTTGCGGTATGGG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATATATGACCCAGGCCTaGCCAATTAGCATTCCACCT +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPYMTQA*PISIPP
Trigger: AGGTGGAATGCTAATTGGCCAGGCCTGGGTCATATA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTGGGAGGCAGCCCAGTaGCAAAAATCAGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEWEAAQ*QKSDEG
Trigger: TCCTTCATCTGATTTTTGCCACTGGGCTGCCTCCCA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGCTATGATCCCTAGATaGCCTGACTCTTCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEAMIPR*PDSSGE
Trigger: TTCTCCTGAAGAGTCAGGTCATCTAGGGATCATAGC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATCATTGTCACTGCTATaGTCCCTAGATGACCTGACT +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPSLSLL*SLDDLT
Trigger: AGTCAGGTCATCTAGGGATCATAGCAGTGACAATGA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAAGTAGAAAGATCACTTaGGCCCAGGAGACCAAGGCT +
Preference number: 2 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKSRKIT*AQETKA
Trigger: AGCCTTGGTCTCCTGGGCTCAAGTGATCTTTCTACT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCCCATACCGCAACAGTaGAACTCTCTGATAGTCTGT +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEPIPQQ*NSLIVC
Trigger: ACAGACTATCAGAGAGTTGCACTGTTGCGGTATGGG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGTATATGACCCAGGCCTaGCCAATTAGCATTCCACCT +
Preference number: 2 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKYMTQA*PISIPP
Trigger: AGGTGGAATGCTAATTGGCCAGGCCTGGGTCATATA...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCTATTTCCATCACAGTaGAGTGATGGGAATGGGCAT +
Preference number: 2 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKLFPSQ*SDGNGH
Trigger: ATGCCCATTCCCATCACTTCACTGTGATGGAAATAG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGAGCCTGCCAGGGAATaGGACAAACCTATAATAAAT +
Preference number: 2 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPEPARE*DKPIIN
Trigger: ATTTATTATAGGTTTGTCTCATTCCCTGGCAGGCTC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTATAGTTTCCTGCTGTaGAACAAGCCCATGCAAGAG +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEYSFLL*NKPMQE
Trigger: CTCTTGCATGGGCTTGTTTCACAGCAGGAAACTATA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTTAAAGGCCTCCCATaGAGACTTAGCCAGACAATG +
Preference number: 2 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKLKGLP*RLSQTM
Trigger: CATTGTCTGGCTAAGTCTTCATGGGAGGCCTTTAAG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CAA 90 bp GGTGGCACACCTCTTCCATTAATACCCCTAATCAGTCCATGTCAATaGGACAGGGATGAAGCTCATTTCTTCCCTAGACTTGTATATATG +
Preference number: 2 (lower is better)
Translates to: GGTPLPLIPLISPCQ*DRDEAHFFPRLVYM
Trigger: CATATATACAAGTCTAGGGAAGAAATGAGCTTCATCCCTGTCCAATTGACATGGACTGATTAGGGGTATTAATGGAAGAGGTGTGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGATGGAAATGTGACCTaGGACATAGACATATCAGAG +
Preference number: 2 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKDGNVT*DIDISE
Trigger: CTCTGATATGTCTATGTCTCAGGTCACATTTCCATC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGATGGAAATGTGACCTaGGACATAGACATATCAGAG +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEDGNVT*DIDISE
Trigger: CTCTGATATGTCTATGTCTCAGGTCACATTTCCATC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTTCAACCTATTATCCTaGCCTTCAGAATGGGTACAG +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEFNLLS*PSEWVQ
Trigger: CTGTACCCATTCTGAAGGCCAGGATAATAGGTTGAA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCATGTCCATCTTGCTTaGAAGACTTTCCCAAGCAAA +
Preference number: 2 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKHVHLA*KTFPSK
Trigger: TTTGCTTGGGAAAGTCTTCCAAGCAAGATGGACATG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGAGAATTGGGACATACTaGAGTGACAGTACTAGATCT +
Preference number: 2 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPRIGTY*SDSTRS
Trigger: AGATCTAGTACTGTCACTCCAGTATGTCCCAATTCT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CAA 90 bp AAAGCCAACTACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTaGTCACAGCTTTTCTTAAAGGCCTCCCATGAAGACTTAGCCAGA +
Preference number: 2 (lower is better)
Translates to: KANYLCNLGSGKQRY*SQLFLKASHEDLAR
Trigger: TCTGGCTAAGTCTTCATGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTAGTTGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTGGGTACAGAAAGAATaGTCCAACCTATTTCTAATC +
Preference number: 2 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPWVQKE*SNLFLI
Trigger: GATTAGAAATAGGTTGGATCATTCTTTCTGTACCCA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGAGCCTGCCAGGGAATaGGACAAACCTATAATAAAT +
Preference number: 2 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFEPARE*DKPIIN
Trigger: ATTTATTATAGGTTTGTCTCATTCCCTGGCAGGCTC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGTTTTGTGGCCAAGCCTaGCATACAGAATATGTTCTT +
Preference number: 2 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKFCGQA*HTEYVL
Trigger: AAGAACATATTCTGTATGTCAGGCTTGGCCACAAAA...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGTTAGCAGAGAGGTTCTaGTCTACAGCATATTACTTG +
Preference number: 2 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKLAERF*STAYYL
Trigger: CAAGTAATATGCTGTAGATCAGAACCTCTCTGCTAA...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATGTCCCTTTTCCAGCTaGTGTCCCAGGCATATGTAC +
Preference number: 2 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLCPFSS*CPRHMY
Trigger: GTACATATGCCTGGGACATCAGCTGGAAAAGGGACA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATTATCTAACTGGCCCTaGACGCCACTGGCAGATGTA +
Preference number: 2 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLLSNWP*TPLADV
Trigger: TACATCTGCCAGTGGCGTTCAGGGCCAGTTAGATAA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACCAATCCAAACAAGATaGACTTTATCTAACTGGCCC +
Preference number: 2 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKPIQTR*TLSNWP
Trigger: GGGCCAGTTAGATAAAGTTCATCTTGTTTGGATTGG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGCATTAACCTTTATATaGACACACCCGTTAGTTCCT +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEALTFI*THPLVP
Trigger: AGGAACTAACGGGTGTGTGCATATAAAGGTTAATGC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAAATTGCAGAGGTCATaGCCCACTGTTGAACATAAA +
Preference number: 2 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKKLQRS*PTVEHK
Trigger: TTTATGTTCAACAGTGGGGCATGACCTCTGCAATTT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACTTTCCCAAGCAAATTaGAGAGGTCATGCCCCACTG +
Preference number: 2 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLLSQAN*RGHAPL
Trigger: CAGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGATATGTTCTTTGATCTaGCCAGGGTACATTCTTTTG +
Preference number: 2 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPICSLI*PGYILL
Trigger: CAAAAGAATGTACCCTGGGCAGATCAAAGAACATAT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATACATTCTTTTGTGGTaGCACACCTCTTCCATTAAT +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPYILLW*HTSSIN
Trigger: ATTAATGGAAGAGGTGTGCCACCACAAAAGAATGTA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAGAATTGGGACATACTaGAGTGACAGTACTAGATCT +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKERIGTY*SDSTRS
Trigger: AGATCTAGTACTGTCACTCCAGTATGTCCCAATTCT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CAA 90 bp TGTATTCATCATGTCCATCTTGCTTGGAAGACTTTCCCAAGCAAATaGCAGAGGTCATGCCCCACTGTTGAACATAAACTCTATTTCCAT +
Preference number: 2 (lower is better)
Translates to: CIHHVHLAWKTFPSK*QRSCPTVEHKLYFH
Trigger: ATGGAAATAGAGTTTATGTTCAACAGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAGTCTTCCAAGCAAGATGGACATGATGAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGATATGTTCTTTGATCTaGCCAGGGTACATTCTTTTG +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEICSLI*PGYILL
Trigger: CAAAAGAATGTACCCTGGGCAGATCAAAGAACATAT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTCTGATTCAAATAGTGTaGGAGAGAGGTCATGAAAAC +
Preference number: 2 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFLIQIV*ERGHEN
Trigger: GTTTTCATGACCTCTCTCCCACACTATTTGAATCAG...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAACCTCTGAATATGATTaGTTCATAGATGGAAATGTG +
Preference number: 2 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPTSEYD*FIDGNV
Trigger: CACATTTCCATCTATGAACCAATCATATTCAGAGGT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTATAAGAGTCTAGGCTaGAAAAGCCAACTACTTATG +
Preference number: 2 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEYKSLG*KSQLLM
Trigger: CATAAGTAGTTGGCTTTTCCAGCCTAGACTCTTATA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTCATTGTCACTGCTATaGTCCCTAGATGACCTGACT +
Preference number: 2 (lower is better)
Translates to: HENSTDQHPNTTALTFICSLSLL*SLDDLT
Trigger: AGTCAGGTCATCTAGGGATCATAGCAGTGACAATGA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAGTCTTTCCTTTATATTaGGACTTCATTGTCACTGCT +
Preference number: 2 (lower is better)
Translates to: WERGHENSTDQHPNTTALVFPLY*DFIVTA
Trigger: AGCAGTGACAATGAAGTCTCAATATAAAGGAAAGAC...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATGGGTACAGAAAGAATaGTCCAACCTATTTCTAATC +
Preference number: 2 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKWVQKE*SNLFLI
Trigger: GATTAGAAATAGGTTGGATCATTCTTTCTGTACCCA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGGTGGCCAAGATACATaGGCCAATGAATTATTTATT +
Preference number: 2 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKGGQDT*ANELFI
Trigger: AATAAATAATTCATTGGCTCATGTATCTTGGCCACC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATCATCATGTCCATCTTaGTTGGAAGACTTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLSSCPS*LEDFPK
Trigger: CTTGGGAAAGTCTTCCAAGCAAGATGGACATGATGA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTTCAACCTATTATCCTaGCCTTCAGAATGGGTACAG +
Preference number: 2 (lower is better)
Translates to: HENSTDQHPNTTALTFICFNLLS*PSEWVQ
Trigger: CTGTACCCATTCTGAAGGCCAGGATAATAGGTTGAA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATGTGTCATTCTTTTGTaGCCAAGCCTGACATACAGA +
Preference number: 2 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLCVILL*PSLTYR
Trigger: TCTGTATGTCAGGCTTGGCCACAAAAGAATGACACA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATTAGCAGAGAGGTTCTaGTCTACAGCATATTACTTG +
Preference number: 2 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLLAERF*STAYYL
Trigger: CAAGTAATATGCTGTAGATCAGAACCTCTCTGCTAA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CAA 90 bp AGGCATATGTACACTTACATTTATTACACAACGGAACGTTGTAAATaGTTTTTATCAAGGACCGTAAATCTGAATGTCCCACCCTTTACC +
Preference number: 2 (lower is better)
Translates to: RHMYTYIYYTTERCK*FLSRTVNLNVPPFT
Trigger: GGTAAAGGGTGGGACATTCAGATTTACGGTCCTTGATAAAAACAATTTACAACGTTCCGTTGTGTAATAAATGTAAGTGTACATATGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR TCA 72 bp AAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATaGAGACTTAGCCAGACAATGGGAGGCAGCCCAGTG +
Preference number: 3 (lower is better)
Translates to: KVFVTAFLKGLP*RLSQTMGGSPV
Trigger: CACTGGGCTGCCTCCCATTGTCTGGCTAAGTCTTCATGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CCA 72 bp TTCTTAAAGGCCTCCCATGAAGACTTAGCCAGACAATaGGAGGCAGCCCAGTGGCAAAAATCAGATGAAGGA +
Preference number: 3 (lower is better)
Translates to: FLKASHEDLARQ*EAAQWQKSDEG
Trigger: TCCTTCATCTGATTTTTGCCACTGGGCTGCCTCCCATTGTCTGGCTAAGTCTTCATGGGAGGCCTTTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAACTTTCCCAAGCAAATaGCAGAGGTCATGCCCCACT +
Preference number: 3 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPTFPSK*QRSCPT
Trigger: AGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAGT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR GCA 72 bp TGGCCAAGCCTGACATACAGAATATGTTCTTTGATCTaGCCAGGGTACATTCTTTTGTGGTGGCACACCTCT +
Preference number: 3 (lower is better)
Translates to: WPSLTYRICSLI*PGYILLWWHTS
Trigger: AGAGGTGTGCCACCACAAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CCA 72 bp AGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTaGCCCATACCGCAACAGTGCAACTCTCTGATAGTC +
Preference number: 3 (lower is better)
Translates to: SSLEVQRVLCWI*PIPQQCNSLIV
Trigger: GACTATCAGAGAGTTGCACTGTTGCGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CCA 72 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTaGATTTGGCCCATACCGCAACAGTGCAACTCTCTG +
Preference number: 3 (lower is better)
Translates to: GFSSLEVQRVLC*IWPIPQQCNSL
Trigger: CAGAGAGTTGCACTGTTGCGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGGTATTATGTTGGATTaGGCCCATACCGCAACAGTG +
Preference number: 3 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEGIMLD*AHTATV
Trigger: CACTGTTGCGGTATGGGCCAAATCCAACATAATACC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATTCATCATGTCCATCTaGCTTGGAAGACTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPFIMSI*LGRLSQ
Trigger: TTGGGAAAGTCTTCCAAGCAAGATGGACATGATGAA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR GCA 72 bp GCTTGGAAGACTTTCCCAAGCAAATTGCAGAGGTCATaGCCCACTGTTGAACATAAACTCTATTTCCATCAC +
Preference number: 3 (lower is better)
Translates to: AWKTFPSKLQRS*PTVEHKLYFHH
Trigger: GTGATGGAAATAGAGTTTATGTTCAACAGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAGTCTTCCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGGTCATGCCCCACTGTaGAACATAAACTCTATTTCC +
Preference number: 3 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKGHAPL*NINSIS
Trigger: GGAAATAGAGTTTATGTTCAACAGTGGGGCATGACC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR TCA 72 bp GAACAGACTGATTCAAATAGTGTGGGAGAGAGGTCATaGAAACAGCACAGATCAGCATCCAAATACAACAGC +
Preference number: 3 (lower is better)
Translates to: EQTDSNSVGERS*KQHRSASKYNS
Trigger: GCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCACACTATTTGAATCAGTCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR TCA 72 bp CAGTGCAACTCTCTGATAGTCTGTCCCTTTTCCAGCTaGTGTCCCAGGCATATGTACACTTACATTTATTAC +
Preference number: 3 (lower is better)
Translates to: QCNSLIVCPFSS*CPRHMYTYIYY
Trigger: GTAATAAATGTAAGTGTACATATGCCTGGGACATCAGCTGGAAAAGGGACAGACTATCAGAGAGTTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CCA 72 bp CATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTaGCCAATTAGCATTCCACCTCTGAATATGATTGGT +
Preference number: 3 (lower is better)
Translates to: HFFPRLVYMTQA*PISIPPLNMIG
Trigger: ACCAATCATATTCAGAGGTGGAATGCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CCA 72 bp ATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGTaGTGGCACACCTCTTCCATTAATACCCCTAATCAG +
Preference number: 3 (lower is better)
Translates to: ICSLICPGYILL*WHTSSINTPNQ
Trigger: CTGATTAGGGGTATTAATGGAAGAGGTGTGCCACCACAAAAGAATGTACCCTGGGCAGATCAAAGAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAAGTCTTTCCTTTATATaGAGACTTCATTGTCACTGC +
Preference number: 3 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPSLSFI*RLHCHC
Trigger: GCAGTGACAATGAAGTCTCAATATAAAGGAAAGACT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR TCA 72 bp ATATCAGAGTCATCCCTGGGAACTTTGCCGGGTTATTaGGAATGCTCTTCTCTCTTCTATTCCATAATGAAC +
Preference number: 3 (lower is better)
Translates to: ISESSLGTLPGY*ECSSLFYSIMN
Trigger: GTTCATTATGGAATAGAAGAGAGAAGAGCATTCTCAATAACCCGGCAAAGTTCCCAGGGATGACTCTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CCA 72 bp AAACACACAGTTCTGAACAGACTGATTCAAATAGTGTaGGAGAGAGGTCATGAAAACAGCACAGATCAGCAT +
Preference number: 3 (lower is better)
Translates to: KHTVLNRLIQIV*ERGHENSTDQH
Trigger: ATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCACACTATTTGAATCAGTCTGTTCAGAACTGTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CAA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGACGGAACGTTGTAAATaGTTTTTATCAAGGACCGTA +
Preference number: 3 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKTERCK*FLSRTV
Trigger: TACGGTCCTTGATAAAAACAATTTACAACGTTCCGT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTAGTCTTTCCTTTATATaGAGACTTCATTGTCACTGC +
Preference number: 3 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFSLSFI*RLHCHC
Trigger: GCAGTGACAATGAAGTCTCAATATAAAGGAAAGACT...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGGGAAACAAAGGTATTaGTCACAGCTTTTCTTAAAG +
Preference number: 3 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKGKQRY*SQLFLK
Trigger: CTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR TCA 72 bp CTCTTTCCTATCACAGGGAGAGAGCCTGCCAGGGAATaGGACAAACCTATAATAAATAAAAGACAAGATATG +
Preference number: 3 (lower is better)
Translates to: LFPITGREPARE*DKPIINKRQDM
Trigger: CATATCTTGTCTTTTATTTATTATAGGTTTGTCTCATTCCCTGGCAGGCTCTCTCCCTGTGATAGGAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR GCA 72 bp AAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTaGTGTTTTTGGGCAAACTACCTCAATAAAGAGATG +
Preference number: 3 (lower is better)
Translates to: KNLESWQVLAVP*CFWANYLNKEM
Trigger: CATCTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCATCAGCGTCCAGCGTaGGGTAGGCCAGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDHQRPA*GRPGPP
Trigger: TGGAGGGCCTGGCCTACCTCACGCTGGACGCTGATG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGTGGCTCTGGCTTGGTaGCCGCTGCACATGCCCGAC +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDVALAW*PLHMPD
Trigger: GTCGGGCATGTGCAGCGGCCACCAAGCCAGAGCCAC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGGTGGCCGCTGCACATaGCCGACAGGGTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEGGRCT*PTGSAL
Trigger: CAGTGCGGACCCTGTCGGGCATGTGCAGCGGCCACC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCCAGCAGGTGGCTGGTaGTCTGCTTCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDPAGGW*SASGPS
Trigger: AGAAGGACCTGAAGCAGATCACCAGCCACCTGCTGG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAGCAGGTTCAGCGCCTaGTCCCTGCCCTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKESRFSA*SLPWPD
Trigger: GTCTGGCCAGGGCAGGGATCAGGCGCTGAACCTGCT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCTTCCGCAAACTGCCTaGGACCGTAGTCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDLPQTA*DRSLCH
Trigger: GTGGCACAGACTACGGTCTCAGGCAGTTTGCGGAAG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGCCTTGCCACCACCTTaGGCCACAATGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISALPPP*ATMVPR
Trigger: CCGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCCCCAGGTGCTCCAGTaGCTGGCATCGCCGATACAG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPPQVLQ*LASPIQ
Trigger: CTGTATCGGCGATGCCAGGCACTGGAGCACCTGGGG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTGGCTTGGTGGCCGCTaGACATGCCCGACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEWLGGR*TCPTGS
Trigger: GGACCCTGTCGGGCATGTGCAGCGGCCACCAAGCCA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGTCCCAGCAGCTGGTTaGCCAGGTCAAAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPVPAAG*PGQRGP
Trigger: AGGGCCCCTTTGACCTGGGCAACCAGCTGCTGGGAC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGGGGAATCAGGGCCTTaGCACCACCTTGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDGESGP*HHLEPQ
Trigger: TTGTGGCTCAAGGTGGTGGCAAGGCCCTGATTCCCC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGCACCATGTTGCACATaGACTCGGTGGCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPAPCCT*TRWPPA
Trigger: GGCAGGCGGCCACCGAGTGCATGTGCAACATGGTGC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGAATCACTGTGGCTCTaGCTTGGTGGCCGCTGCACA +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDESLWL*LGGRCT
Trigger: TGTGCAGCGGCCACCAAGCCAGAGCCACAGTGATTC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGTGCCAGGAATACCCTaGCCAGCAGCTCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDVPGIP*PAAPWS
Trigger: AGACCAAGGAGCTGCTGGCCAGGGTATTCCTGGCAC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATTGCAGGCAAAGCCGCTaGAGGATCTCCAACCACTGG +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDCRQSR*RISNHW
Trigger: CCAGTGGTTGGAGATCCTCCAGCGGCTTTGCCTGCA...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGGCTCTGGAGGCATCTaGAGCTGCCTGGACGTAGCT +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPGSGGI*SCLDVA
Trigger: AGCTACGTCCAGGCAGCTTCAGATGCCTCCAGAGCC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCAGATCTTGCGGAAGTaGTCGCGCTCCGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISQILRK*SRSGSQ
Trigger: CTGTGACCCGGAGCGCGATCACTTCCGCAAGATCTG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACAGATCTTGCGGAAGTaGTCGCGCTCCGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPQILRK*SRSGSQ
Trigger: CTGTGACCCGGAGCGCGATCACTTCCGCAAGATCTG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTCATCAGCGTCCAGCGTaGGGTAGGCCAGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFHQRPA*GRPGPP
Trigger: TGGAGGGCCTGGCCTACCTCACGCTGGACGCTGATG...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGCCCAGACAGGTTGGTaGGGCCTAGGAGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISAQTGW*GLGEPH
Trigger: ATGAGGCTCTCCTAGGCCTCACCAACCTGTCTGGGC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTCGACAGGGTCCGCACTaGAGCCAGCACCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFRQGPH*SQHQLR
Trigger: CCTGAGCTGGTGCTGGCTGCAGTGCGGACCCTGTCG...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACGACAGGGTCCGCACTaGAGCCAGCACCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALRQGPH*SQHQLR
Trigger: CCTGAGCTGGTGCTGGCTGCAGTGCGGACCCTGTCG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGGCTTGGTGGCCGCTaGACATGCCCGACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALWLGGR*TCPTGS
Trigger: GGACCCTGTCGGGCATGTGCAGCGGCCACCAAGCCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTCCTCCTTCCCTCGATaGTCCCGCTTGTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPSSFPR*SRLSSP
Trigger: TGGGGAGGACAAGCGGGAGCATCGAGGGAAGGAGGA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGGGCTGCCTTCACCTTaGCCACATCTGTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPGLPSP*PHLCPP
Trigger: TGGAGGGCACAGATGTGGGCAAGGTGAAGGCAGCCC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGGGCTGCCTTCACCTTaGCCACATCTGTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISGLPSP*PHLCPP
Trigger: TGGAGGGCACAGATGTGGGCAAGGTGAAGGCAGCCC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATATGTCACCCTGGGGCTaGTGGGGACTCTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDMSPWG*WGLSFL
Trigger: TAGGAAAGAGAGTCCCCAGCAGCCCCAGGGTGACAT...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGAGGTGCTCCAGTGCCTaGCATCGCCGATACAGAGCC +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPRCSSA*HRRYRA
Trigger: GGCTCTGTATCGGCGATGCCAGGCACTGGAGCACCT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTCCGTGGCTCGAGGGTaGCACAACGCTGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPSVARG*HNAARL
Trigger: AAGACGTGCAGCGTTGTGCCACCCTCGAGCCACGGA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGTGGCTCTGGCTTGGTaGCCGCTGCACATGCCCGAC +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFVALAW*PLHMPD
Trigger: GTCGGGCATGTGCAGCGGCCACCAAGCCAGAGCCAC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGACTGTGGCTCTGGCTTaGTGGCCGCTGCACATGCCC +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKTVALA*WPLHMP
Trigger: GGGCATGTGCAGCGGCCACCAAGCCAGAGCCACAGT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCAGGGGCAGGCAGGATaGCAGATCTGGAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKQGQAG*QIWNLP
Trigger: GGGCAGGTTCCAGATCTGCCATCCTGCCTGCCCCTG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCTTCGTGGAGGCATaGATGAGGGCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKSFVEA*MRASTA
Trigger: GGCCGTGGAGGCCCTCATCCATGCCTCCACGAAGCT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATAGGGCAGGGACGTCCTaGACAAAGTCGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDRAGTS*TKSSFT
Trigger: TGTGAAGGACGACTTTGTCCAGGACGTCCCTGCCCT...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATTCACCCTGGGGCTGCTaGGGACTCTCTTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDSPWGC*GLSFLS
Trigger: TGATAGGAAAGAGAGTCCCCAGCAGCCCCAGGGTGA...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAAACGCTGCACGTCTTTaGAGGCCTGGTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPNAARL*RPGPAS
Trigger: GGAAGCTGGACCAGGCCTTCAAAGACGTGCAGCGTT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCAACGCTGCACGTCTTTaGAGGCCTGGTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISNAARL*RPGPAS
Trigger: GGAAGCTGGACCAGGCCTTCAAAGACGTGCAGCGTT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCCTGAATGCTGGTGTTaGGTCTCCTCAGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDPECWC*VSSASP
Trigger: AGGAGATGCTGAGGAGACTCAACACCAGCATTCAGG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATACTCGGAGCTTCTCCTaGATGCTGGTGTTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDTRSFS*MLVLSL
Trigger: GAGACTCAACACCAGCATTCAGGAGAAGCTCCGAGT...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCCAGCAGGTGGCTGGTaGTCTGCTTCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPPAGGW*SASGPS
Trigger: AGAAGGACCTGAAGCAGATCACCAGCCACCTGCTGG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGCCTTGCCACCACCTTaGGCCACAATGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKALPPP*ATMVPR
Trigger: CCGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGCCCAGACAGGTTGGTaGGGCCTAGGAGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKAQTGW*GLGEPH
Trigger: ATGAGGCTCTCCTAGGCCTCACCAACCTGTCTGGGC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGTAGGTTGTAGGCAATaGCCAGGCCCCGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISVGCRQ*PGPGVG
Trigger: TCCAACACCGGGGCCTGGTCATTGCCTACAACCTAC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACCCCAGGTGCTCCAGTaGCTGGCATCGCCGATACAG +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALPQVLQ*LASPIQ
Trigger: CTGTATCGGCGATGCCAGGCACTGGAGCACCTGGGG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGAGGGTGGCACAACGCTaGACGTCTTTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPRVAQR*TSLKAW
Trigger: CCAGGCCTTCAAAGACGTGCAGCGTTGTGCCACCCT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGTCAGCGCCTGATCCCTaGCCTGGCCAGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKSAPDP*PGQTPS
Trigger: AGAAGGTGTCTGGCCAGGGCAGGGATCAGGCGCTGA...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAGCTCAAACATGGCCTaGAGGGCAGGGACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKESSNMA*RAGTSW
Trigger: CCAGGACGTCCCTGCCCTGCAGGCCATGTTTGAGCT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGCACAGTTTCTTGTGTaGTGCTGTCAGCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDAQFLV*CCQHGQ
Trigger: CTGGCCATGCTGACAGCAGCACACAAGAAACTGTGC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAGCAGGGCCTTGTCCTTaGTCAGCTTCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALAGPCP*SASGPG
Trigger: GCCAGGCCCTGAAGCTGACCAAGGACAAGGCCCTGC...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTCCGTGGCTCGAGGGTaGCACAACGCTGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKESVARG*HNAARL
Trigger: AAGACGTGCAGCGTTGTGCCACCCTCGAGCCACGGA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGAAGTTCTGGTTCCGTaGCTCGAGGGTGGCACAACG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPEVLVP*LEGGTT
Trigger: CGTTGTGCCACCCTCGAGCCACGGAACCAGAACTTC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGAAGTTCTGGTTCCGTaGCTCGAGGGTGGCACAACG +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPEVLVP*LEGGTT
Trigger: CGTTGTGCCACCCTCGAGCCACGGAACCAGAACTTC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAACTGTGGCTCTGGCTTaGTGGCCGCTGCACATGCCC +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKTVALA*WPLHMP
Trigger: GGGCATGTGCAGCGGCCACCAAGCCAGAGCCACAGT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCATGCAGAATCACTGTaGCTCTGGCTTGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPHAESL*LWLGGR
Trigger: GCGGCCACCAAGCCAGAGCCACAGTGATTCTGCATG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACAGGGGCAGGCAGGATaGCAGATCTGGAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKQGQAG*QIWNLP
Trigger: GGGCAGGTTCCAGATCTGCCATCCTGCCTGCCCCTG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTAGCTTCGTGGAGGCATaGATGAGGGCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFSFVEA*MRASTA
Trigger: GGCCGTGGAGGCCCTCATCCATGCCTCCACGAAGCT...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGTGGCCAGCTCAAACATaGCCTGCAGGGCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKWPAQT*PAGQGR
Trigger: ACGTCCCTGCCCTGCAGGCCATGTTTGAGCTGGCCA...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGGTGCCTCGGTCCTTTaGGTTGTCACACAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPGASVL*VVTQCQ
Trigger: CTGGCACTGTGTGACAACCCAAAGGACCGAGGCACC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGCACATGCACTCGGTaGCCGCCTGCCGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALCTCTR*PPAAAD
Trigger: ATCAGCTGCGGCAGGCGGCCACCGAGTGCATGTGCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAACCAGGCCCCGGTGTTaGACAGACAGCTGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKTRPRC*TDSWSC
Trigger: GCACGACCAGCTGTCTGTCCAACACCGGGGCCTGGT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCTCTCCACCAGCTTCTTaGCCAGCTCAGCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISSPPAS*PAQHRL
Trigger: CAGCCGATGCTGAGCTGGCCAAGAAGCTGGTGGAGA...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGTGATGCTGCTCCCCTaGGCACTCCTGTGTCAACCT +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKVMLLP*ALLCQP
Trigger: AGGTTGACACAGGAGTGCTCAGGGGAGCAGCATCAC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAGGCTCTGGAGGCATCTaGAGCTGCCTGGACGTAGCT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALGSGGI*SCLDVA
Trigger: AGCTACGTCCAGGCAGCTTCAGATGCCTCCAGAGCC...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCACGGCCTAGGACAATaGGATTGTTGGCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDHGLGQ*DCWQPF
Trigger: AAAAGGCTGCCAACAATCTCATTGTCCTAGGCCGTG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGCCCTGCAGGATCCCTaGCACTGTCTGGATGGCATT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEALQDP*HCLDGI
Trigger: AATGCCATCCAGACAGTGTCAGGGATCCTGCAGGGC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCTTCCGCAAACTGCCTaGGACCGTAGTCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKELPQTA*DRSLCH
Trigger: GTGGCACAGACTACGGTCTCAGGCAGTTTGCGGAAG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAAAGCCAGGGCAGAGATaGCACCCGCCTTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKKPGQR*HPPSEA
Trigger: GGCTTCTGAAGGCGGGTGTCATCTCTGCCCTGGCTT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCACTGGGTTGTCACTTaGGTCATCTTGAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDHWVVT*VILRHS
Trigger: ACTGTGCCTCAAGATGACTCAAGTGACAACCCAGTG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCACTCCCAGCATCCCTaGGGGTCGCTGTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKHSQHP*GSLSKT
Trigger: TGTCTTAGACAGCGACCCTCAGGGATGCTGGGAGTG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAGGGTGGCACAACGCTaGACGTCTTTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKERVAQR*TSLKAW
Trigger: CCAGGCCTTCAAAGACGTGCAGCGTTGTGCCACCCT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGGTGGCCGCTGCACATaGCCGACAGGGTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICGGRCT*PTGSAL
Trigger: CAGTGCGGACCCTGTCGGGCATGTGCAGCGGCCACC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTCCTCCTTCCCTCGATaGTCCCGCTTGTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFSSFPR*SRLSSP
Trigger: TGGGGAGGACAAGCGGGAGCATCGAGGGAAGGAGGA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAAGCTCAAACATGGCCTaGAGGGCAGGGACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALSSNMA*RAGTSW
Trigger: CCAGGACGTCCCTGCCCTGCAGGCCATGTTTGAGCT...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCATCGTAGCTGTTGGTaGAGTTCACCAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPHRSCW*SSPGWW
Trigger: CCACCACCCTGGTGAACTGCACCAACAGCTACGATG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTGGGTTGTCACACAGTaGCAGGAATACCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPWVVTQ*QEYPGQ
Trigger: CTGGCCAGGGTATTCCTGGCACTGTGTGACAACCCA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTACAGACAGCTGGTCGTaGAGGCAAAGCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFTDSWS*RQSRWR
Trigger: CCTCCAGCGGCTTTGCCTGCACGACCAGCTGTCTGT...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAACAGACAGCTGGTCGTaGAGGCAAAGCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKTDSWS*RQSRWR
Trigger: CCTCCAGCGGCTTTGCCTGCACGACCAGCTGTCTGT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTAGGTGCTCCAGTGCCTaGCATCGCCGATACAGAGCC +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFRCSSA*HRRYRA
Trigger: GGCTCTGTATCGGCGATGCCAGGCACTGGAGCACCT...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGACGTCTTTGAAGGCCTaGTCCAGCTTCCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKETSLKA*SSFPRC
Trigger: GCACCTGGGGAAGCTGGACCAGGCCTTCAAAGACGT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGTACCCTCGAGTCTGTaGAGAACTGCACTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPVPSSL*RTALGA
Trigger: AGCTCCGAGTGCAGTTCTCCACAGACTCGAGGGTAC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGTACCCTCGAGTCTGTaGAGAACTGCACTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPVPSSL*RTALGA
Trigger: AGCTCCGAGTGCAGTTCTCCACAGACTCGAGGGTAC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCATGCAGAATCACTGTaGCTCTGGCTTGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEHAESL*LWLGGR
Trigger: GCGGCCACCAAGCCAGAGCCACAGTGATTCTGCATG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGGCCAGCTCAAACATaGCCTGCAGGGCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALWPAQT*PAGQGR
Trigger: ACGTCCCTGCCCTGCAGGCCATGTTTGAGCTGGCCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTTCACCAGGGTGGTaGCCACCGAGTACAGGATGG +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKSSPGW*PPSTGW
Trigger: CCATCCTGTACTCGGTGGCCACCACCCTGGTGAACT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCTCACCCTGGGGCTGCTaGGGACTCTCTTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISSPWGC*GLSFLS
Trigger: TGATAGGAAAGAGAGTCCCCAGCAGCCCCAGGGTGA...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGTGATGCTGCTCCCCTaGGCACTCCTGTGTCAACCT +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFVMLLP*ALLCQP
Trigger: AGGTTGACACAGGAGTGCTCAGGGGAGCAGCATCAC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACCTGAATGCTGGTGTTaGGTCTCCTCAGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPPECWC*VSSASP
Trigger: AGGAGATGCTGAGGAGACTCAACACCAGCATTCAGG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAACTCGGAGCTTCTCCTaGATGCTGGTGTTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPTRSFS*MLVLSL
Trigger: GAGACTCAACACCAGCATTCAGGAGAAGCTCCGAGT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACAGACAAGGAGTCAATaGTGGCTTGGAGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPQTRSQ*WLGAGC
Trigger: GCAACCTGCTCCAAGCCATCATTGACTCCTTGTCTG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAGCAGGTTCAGCGCCTaGTCCCTGCCCTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLSRFSA*SLPWPD
Trigger: GTCTGGCCAGGGCAGGGATCAGGCGCTGAACCTGCT...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCCTTGGTCTGGTCAGTaGGGATGGCACTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISPWSGQ*GWHYLL
Trigger: AAGCAGATAGTGCCATCCTCACTGACCAGACCAAGG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACACTCCCAGCATCCCTaGGGGTCGCTGTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKHSQHP*GSLSKT
Trigger: TGTCTTAGACAGCGACCCTCAGGGATGCTGGGAGTG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCTCCTGGAGCTGGAAATaGCGGTTTCCTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISSWSWK*RFPSSF
Trigger: GAAGGAGGAAGGAAACCGGCATTTCCAGCTCCAGGA...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTTTCAGGCCACAGGCTaGCCGGTTCCGATAAAGCGT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEFQATG*PVPIKR
Trigger: ACGCTTTATCGGAACCGGGCAGCCTGTGGCCTGAAA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATCGGTCTATCCGCACTaGATGCAGAATCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPSVYPH*MQNHCG
Trigger: GCCACAGTGATTCTGCATGCAGTGCGGATAGACCGA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGTAGTCTGTGCCACCTaGAGAGCCGAGCTTACAGAG +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKVVCAT*RAELTE
Trigger: CTCTGTAAGCTCGGCTCTGCAGGTGGCACAGACTAC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTGGGTTGTCACACAGTaGCAGGAATACCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEWVVTQ*QEYPGQ
Trigger: CTGGCCAGGGTATTCCTGGCACTGTGTGACAACCCA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGGGGAATCAGGGCCTTaGCACCACCTTGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFGESGP*HHLEPQ
Trigger: TTGTGGCTCAAGGTGGTGGCAAGGCCCTGATTCCCC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCCTGCAGCCGCATTCTaGACCTTATCATCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPPAAAF*TLSSSS
Trigger: GGAGGATGATGATAAGGTGCAGAATGCGGCTGCAGG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACCTGCAGCCGCATTCTaGACCTTATCATCATCCTCC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPPAAAF*TLSSSS
Trigger: GGAGGATGATGATAAGGTGCAGAATGCGGCTGCAGG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCATCTGGCTCCTGTTTaGCCACCACAGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISHLAPV*PPQSGS
Trigger: AGATCCTGACTGTGGTGGGCAAACAGGAGCCAGATG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCACAGGGAGAGAGCCTaGCAGGGAATGAGACAAACC +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKHRERA*QGMRQT
Trigger: GGTTTGTCTCATTCCCTGGCAGGCTCTCTCCCTGTG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGATGTCACCCTGGGGCTaGTGGGGACTCTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEMSPWG*WGLSFL
Trigger: TAGGAAAGAGAGTCCCCAGCAGCCCCAGGGTGACAT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGGCTGTAGCTATTTGTaGCGGCCTTGTAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPGCSYL*RPCSPG
Trigger: TCCAGGACTACAAGGCCGCCACAAATAGCTACAGCC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAACGTCTTTGAAGGCCTaGTCCAGCTTCCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKTSLKA*SSFPRC
Trigger: GCACCTGGGGAAGCTGGACCAGGCCTTCAAAGACGT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGCTTCAGGTCCTTCTTaGTGTCTAGAACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPASGPS*CLEPGP
Trigger: AGGCCCTGGTTCTAGACACCAAGAAGGACCTGAAGC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATTCTTGTCCATGTCCTaGGGGTCAAACTTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPFLSMS*GSNLPV
Trigger: CACGGGCAAGTTTGACCCCCAGGACATGGACAAGAA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATTCAGTCCCAGCAGCTaGTTGCCCAGGTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALFSPSS*LPRSKG
Trigger: CCCCTTTGACCTGGGCAACCAGCTGCTGGGACTGAA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAGGGCAGGGACGTCCTaGACAAAGTCGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKERAGTS*TKSSFT
Trigger: TGTGAAGGACGACTTTGTCCAGGACGTCCCTGCCCT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCCACCGAGTACAGGATaGTCTTGTCACTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISPPSTG*SCHWYL
Trigger: CAGGTACCAGTGACAAGACCATCCTGTACTCGGTGG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGCAGTTCACCAGGGTaGTGGCCACCGAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALCSSPG*WPPSTG
Trigger: TCCTGTACTCGGTGGCCACCACCCTGGTGAACTGCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGAGCTGGACAAGCTCTaGGATGACCTCCTTGACATC +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPELDKL*DDLLDI
Trigger: GATGTCAAGGAGGTCATCCCAGAGCTTGTCCAGCTC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGAGAACTTGGCGAGCTaGACAAGCTCTGGGATGACC +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKENLAS*TSSGMT
Trigger: GGTCATCCCAGAGCTTGTCCAGCTCGCCAAGTTCTC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGCTGCTTGGAGAACTTaGCGAGCTGGACAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKAAWRT*RAGQAL
Trigger: CAGAGCTTGTCCAGCTCGCCAAGTTCTCCAAGCAGC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGCTGCTTGGAGAACTTaGCGAGCTGGACAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEAAWRT*RAGQAL
Trigger: CAGAGCTTGTCCAGCTCGCCAAGTTCTCCAAGCAGC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCAGTCCTTCTTGTCCTTaGGGTGTTCCTCGGGCACAT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISSPSCP*GVPRAH
Trigger: ATGTGCCCGAGGAACACCCCAAGGACAAGAAGGACT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCAGCAGCTCCTTGGTCTaGTCAGTGAGGATGGCACTA +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISSSSLV*SVRMAL
Trigger: TAGTGCCATCCTCACTGACCAGACCAAGGAGCTGCT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCACCTTGAGCCACAATaGTGCCTCGGTCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEHLEPQ*CLGPLG
Trigger: ACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGCAGGCAAAGCCGCTaGAGGATCTCCAACCACTGG +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALCRQSR*RISNHW
Trigger: CCAGTGGTTGGAGATCCTCCAGCGGCTTTGCCTGCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTGCCTTCTTCTCATCTaGCTCCTGTTTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPCLLLI*LLFAHH
Trigger: GTGGTGGGCAAACAGGAGCCAGATGAGAAGAAGGCA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGAATGGGCATGGGACTaGGACAGAGCACTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFEWAWD*DRALQV
Trigger: CACCTGCAGTGCTCTGTCCCAGTCCCATGCCCATTC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCCACCGAGTACAGGATaGTCTTGTCACTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPPPSTG*SCHWSW
Trigger: CCAAGACCAGTGACAAGACCATCCTGTACTCGGTGG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCAGACAAGGAGTCAATaGTGGCTTGGAGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEQTRSQ*WLGAGC
Trigger: GCAACCTGCTCCAAGCCATCATTGACTCCTTGTCTG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCAGACACCTTCTTGCTaGCTAGCATGTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKQTPSC*LACPAG
Trigger: ACCTGCTGGACATGCTAGTCAGCAAGAAGGTGTCTG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGTACGTGAGTTGTCATaGATGGCAAGGTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISVRELS*MARSFL
Trigger: CAGGAAGGACCTTGCCATTCATGACAACTCACGTAC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGTACGTGAGTTGTCATaGATGGCAAGGTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPVRELS*MARSFL
Trigger: CAGGAAGGACCTTGCCATTCATGACAACTCACGTAC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCACATAGATGGTACGTaGGTTGTCATGAATGGCAAG +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDHIDGT*VVMNGK
Trigger: CTTGCCATTCATGACAACTCACGTACCATCTATGTG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATTCACTTGAGTCATCTTaGGGCACAGTTTCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDSLESS*GTVSCV
Trigger: CACACAAGAAACTGTGCCTCAAGATGACTCAAGTGA...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCACTGGGTTGTCACTTaGGTCATCTTGAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISHWVVT*VILRHS
Trigger: ACTGTGCCTCAAGATGACTCAAGTGACAACCCAGTG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGTGGGAGAGAGGTCATaGAAACAGCACAGATCAGCA +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISVGERS*KQHRSA
Trigger: TGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCAC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCTGTCCCTTTTCCAGCTaGTGTCCCAGGCATATGTAC +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISCPFSS*CPRHMY
Trigger: GTACATATGCCTGGGACATCAGCTGGAAAAGGGACA...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTGTCCCTTTTCCAGCTaGTGTCCCAGGCATATGTAC +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPCPFSS*CPRHMY
Trigger: GTACATATGCCTGGGACATCAGCTGGAAAAGGGACA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATTATAGTTTCCTGCTGTaGAACAAGCCCATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDYSFLL*NKPMQE
Trigger: CTCTTGCATGGGCTTGTTTCACAGCAGGAAACTATA...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGAGTAGAAAGATCACTTaGGCCCAGGAGACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPSRKIT*AQETKA
Trigger: AGCCTTGGTCTCCTGGGCTCAAGTGATCTTTCTACT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATACCTCAATAAAGAGATaGTCTCAGGCTAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDTSIKR*SQASIC
Trigger: GCAGATGCTAGCCTGAGATCATCTCTTTATTGAGGT...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCACGATGCTTTCGATCTaGCCTCTTGTGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISTMLSI*PLVMLL
Trigger: GAGCAGCATCACAAGAGGGCAGATCGAAAGCATCGT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAACGATGCTTTCGATCTaGCCTCTTGTGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPTMLSI*PLVMLL
Trigger: GAGCAGCATCACAAGAGGGCAGATCGAAAGCATCGT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATTTCAGGCCACAGGCTaGCCGGTTCCGATAAAGCGT +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKFQATG*PVPIKR
Trigger: ACGCTTTATCGGAACCGGGCAGCCTGTGGCCTGAAA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCTCTATCCGCACTGCATaGAGAATCACTGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISSIRTA*RITVAL
Trigger: CAGAGCCACAGTGATTCTGCATGCAGTGCGGATAGA...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTGGCTTGGAGCAGGTTaGAGACAGCCAGAGACATCT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEWLGAG*RQPETS
Trigger: AGATGTCTCTGGCTGTCTGCAACCTGCTCCAAGCCA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGGCAGATCTGGAACCTaGCCCACAACCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKGRSGT*PTTFRI
Trigger: GATCCTGAAGGTTGTGGGGCAGGTTCCAGATCTGCC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGTCCCAGCAGCTGGTTaGCCAGGTCAAAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLVPAAG*PGQRGP
Trigger: AGGGCCCCTTTGACCTGGGCAACCAGCTGCTGGGAC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATGTTCCTCGGGCACATaGTGCTTGGAGAACTTGGCG +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKCSSGT*CLENLA
Trigger: CGCCAAGTTCTCCAAGCAGCATGTGCCCGAGGAACA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGCACCATGTTGCACATaGACTCGGTGGCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICAPCCT*TRWPPA
Trigger: GGCAGGCGGCCACCGAGTGCATGTGCAACATGGTGC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCAGTTTCTTGTGTGCTaGTGTCAGCATGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKQFLVC*CQHGQS
Trigger: GCTCTGGCCATGCTGACAGCAGCACACAAGAAACTG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCTTTCCCAAGCAAATTaGAGAGGTCATGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISLSQAN*RGHAPL
Trigger: CAGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGCAGGGCCTTGTCCTTaGTCAGCTTCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLAGPCP*SASGPG
Trigger: GCCAGGCCCTGAAGCTGACCAAGGACAAGGCCCTGC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTTCTTGTCCATGTCCTaGGGGTCAAACTTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEFLSMS*GSNLPV
Trigger: CACGGGCAAGTTTGACCCCCAGGACATGGACAAGAA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGGGTCCGAGTGTCTATaGACATATTGCACAGCCACT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPGSECL*TYCTAT
Trigger: AGTGGCTGTGCAATATGTCCATAGACACTCGGACCC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAGCAGCTCCTTGGTCTaGTCAGTGAGGATGGCACTA +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKESSSLV*SVRMAL
Trigger: TAGTGCCATCCTCACTGACCAGACCAAGGAGCTGCT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACACCTTGAGCCACAATaGTGCCTCGGTCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKHLEPQ*CLGPLG
Trigger: ACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTGCACATGCACTCGGTaGCCGCCTGCCGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICCTCTR*PPAAAD
Trigger: ATCAGCTGCGGCAGGCGGCCACCGAGTGCATGTGCA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCACCAGGCCCCGGTGTTaGACAGACAGCTGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICTRPRC*TDSWSC
Trigger: GCACGACCAGCTGTCTGTCCAACACCGGGGCCTGGT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACAACTATGTCACCCTaGGGCTGCTGGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALTTMSP*GCWGLS
Trigger: AGAGAGTCCCCAGCAGCCCCAGGGTGACATAGTTGT...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTGGGAGGCAGCCCAGTaGCAAAAATCAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPWEAAQ*QKSDEG
Trigger: TCCTTCATCTGATTTTTGCCACTGGGCTGCCTCCCA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCCGATCTGCCCTCTTGTaGTGCTGCTCCCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICRSALL*CCSPEH
Trigger: GTGCTCAGGGGAGCAGCATCACAAGAGGGCAGATCG...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACATTCTCCACGGCCATaGGGCTACAGATTCGGTCTA +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALHSPRP*GYRFGL
Trigger: TAGACCGAATCTGTAGCCTCATGGCCGTGGAGAATG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCCAGTGTGCGGATCTTaGTCTTCTCATTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISPVCGS*SSHFWW
Trigger: CCACCAAAAATGAGAAGATCAAGATCCGCACACTGG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGCCAGGGCAGAGATaGCACCCGCCTTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLKPGQR*HPPSEA
Trigger: GGCTTCTGAAGGCGGGTGTCATCTCTGCCCTGGCTT...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTCATTCTCGGGCTGTCTaGACCACTTCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFHSRAV*TTSAFF
Trigger: GAAGAAGGCAGAAGTGGTTCAGACAGCCCGAGAATG...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTAGAAAGATCACTTaGGCCCAGGAGACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKSRKIT*AQETKA
Trigger: AGCCTTGGTCTCCTGGGCTCAAGTGATCTTTCTACT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCTTAAAGGCCTCCCATaGAGACTTAGCCAGACAATG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPLKGLP*RLSQTM
Trigger: CATTGTCTGGCTAAGTCTTCATGGGAGGCCTTTAAG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACTTAAAGGCCTCCCATaGAGACTTAGCCAGACAATG +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPLKGLP*RLSQTM
Trigger: CATTGTCTGGCTAAGTCTTCATGGGAGGCCTTTAAG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTTTCAGCAAGGACGATaGTTTCGATCTGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPFQQGR*FRSALL
Trigger: CAAGAGGGCAGATCGAAAGCATCGTCCTTGCTGAAA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTCCTGGAGCTGGAAATaGCGGTTTCCTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFSWSWK*RFPSSF
Trigger: GAAGGAGGAAGGAAACCGGCATTTCCAGCTCCAGGA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTTAGTGTCCAGAAGCTaGAGTAGCAAGGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPLVSRS*SSKATP
Trigger: TGGAGTAGCCTTGCTACTGCAGCTTCTGGACACTAA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATCGGTCTATCCGCACTaGATGCAGAATCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALSVYPH*MQNHCG
Trigger: GCCACAGTGATTCTGCATGCAGTGCGGATAGACCGA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTGGCTTGGAGCAGGTTaGAGACAGCCAGAGACATCT +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFWLGAG*RQPETS
Trigger: AGATGTCTCTGGCTGTCTGCAACCTGCTCCAAGCCA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTCAGCGCCTGATCCCTaGCCTGGCCAGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICSAPDP*PGQTPS
Trigger: AGAAGGTGTCTGGCCAGGGCAGGGATCAGGCGCTGA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAATTCCTCACAGATCTTaGGGAAGTGATCGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALIPHRS*GSDRAP
Trigger: CGGAGCGCGATCACTTCCGCAAGATCTGTGAGGAAT...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAATTCCTCACAGATCTTaGGGAAGTGATCGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKIPHRS*GSDRAP
Trigger: CGGAGCGCGATCACTTCCGCAAGATCTGTGAGGAAT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCTATTGCACAGCCACTTaGGACACTGTTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISYCTAT*DTVWPV
Trigger: AACTGGCCAAACAGTGTCGCAAGTGGCTGTGCAATA...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCTTGTCACTGGTACCTaGCTTGGCCAGCTCAAACAT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKELVTGT*LGQLKH
Trigger: ATGTTTGAGCTGGCCAAGGCAGGTACCAGTGACAAG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTTGAGCCACAATGGTaGCTCGGTCCTTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKLEPQW*LGPLGC
Trigger: ACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACTTGAGCCACAATGGTaGCTCGGTCCTTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALLEPQW*LGPLGC
Trigger: ACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACAGTTTCTTGTGTGCTaGTGTCAGCATGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALQFLVC*CQHGQS
Trigger: GCTCTGGCCATGCTGACAGCAGCACACAAGAAACTG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCATCCCTGGGAACTTTaGCGGGTTATTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISHPWEL*RVIENA
Trigger: AGCATTCTCAATAACCCGGCAAAGTTCCCAGGGATG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGCTTCAGGTCCTTCTTaGTGTCTAGAACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKASGPS*CLEPGP
Trigger: AGGCCCTGGTTCTAGACACCAAGAAGGACCTGAAGC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGTGAGTTGTCATGAATaGCAAGGTCCTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPVSCHE*QGPSWE
Trigger: TTCCCAGGAAGGACCTTGCCATTCATGACAACTCAC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGAGCTGGACAAGCTCTaGGATGACCTCCTTGACATC +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKELDKL*DDLLDI
Trigger: GATGTCAAGGAGGTCATCCCAGAGCTTGTCCAGCTC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAAAGCAATGTCCGGATTaGAGACAGCAGCGATCTTTG +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPKQCPD*RQQRSL
Trigger: CAAAGATCGCTGCTGTCTCCAATCCGGACATTGCTT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGAAGCAATGTCCGGATTaGAGACAGCAGCGATCTTTG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPKQCPD*RQQRSL
Trigger: CAAAGATCGCTGCTGTCTCCAATCCGGACATTGCTT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTCCTGTACCTCCTTGTaGAGCACCATGTTGCACATG +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKESCTSL*STMLHM
Trigger: CATGTGCAACATGGTGCTCCACAAGGAGGTACAGGA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGCCTTCTTCTCATCTaGCTCCTGTTTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALCLLLI*LLFAHH
Trigger: GTGGTGGGCAAACAGGAGCCAGATGAGAAGAAGGCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGATGTCAGACCTTCCCTaGGTGGCCAAGATACATGAG +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEMSDLP*VAKIHE
Trigger: CTCATGTATCTTGGCCACCCAGGGAAGGTCTGACAT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGTAGGTTGTAGGCAATaGCCAGGCCCCGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICVGCRQ*PGPGVG
Trigger: TCCAACACCGGGGCCTGGTCATTGCCTACAACCTAC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTCATTGTCACTGCTATaGTCCCTAGATGACCTGACT +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPSLSLL*SLDDLT
Trigger: AGTCAGGTCATCTAGGGATCATAGCAGTGACAATGA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAACCTCAATAAAGAGATaGTCTCAGGCTAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPTSIKR*SQASIC
Trigger: GCAGATGCTAGCCTGAGATCATCTCTTTATTGAGGT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGGTTCCGATAAAGCGTaGCCAGCAGGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICGSDKA*PAGPCP
Trigger: AGGACAAGGCCCTGCTGGCCACGCTTTATCGGAACC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGAATCACTGTGGCTCTaGCTTGGTGGCCGCTGCACA +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICESLWL*LGGRCT
Trigger: TGTGCAGCGGCCACCAAGCCAGAGCCACAGTGATTC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGTGAGTTGTCATGAATaGCAAGGTCCTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEVSCHE*QGPSWE
Trigger: TTCCCAGGAAGGACCTTGCCATTCATGACAACTCAC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGACTTGCGACACTGTTTaGCCAGTTTTTCTGTCGACC +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKTCDTV*PVFLST
Trigger: GGTCGACAGAAAAACTGGCCAAACAGTGTCGCAAGT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAGGGTCCGAGTGTCTATaGACATATTGCACAGCCACT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALGSECL*TYCTAT
Trigger: AGTGGCTGTGCAATATGTCCATAGACACTCGGACCC...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAGTTCACCAGGGTGGTaGCCACCGAGTACAGGATGG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLSSPGW*PPSTGW
Trigger: CCATCCTGTACTCGGTGGCCACCACCCTGGTGAACT...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTGCAGTTCACCAGGGTaGTGGCCACCGAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICCSSPG*WPPSTG
Trigger: TCCTGTACTCGGTGGCCACCACCCTGGTGAACTGCA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGGTGCCTCGGTCCTTTaGGTTGTCACACAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLGASVL*VVTQCQ
Trigger: CTGGCACTGTGTGACAACCCAAAGGACCGAGGCACC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATGTTGGACAGACAGCTaGTCGTGCAGGCAAAGCCGC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLCWTDS*SCRQSR
Trigger: GCGGCTTTGCCTGCACGACCAGCTGTCTGTCCAACA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATCTCCACCAGCTTCTTaGCCAGCTCAGCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLSPPAS*PAQHRL
Trigger: CAGCCGATGCTGAGCTGGCCAAGAAGCTGGTGGAGA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGAATGGGCATGGGACTaGGACAGAGCACTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLEWAWD*DRALQV
Trigger: CACCTGCAGTGCTCTGTCCCAGTCCCATGCCCATTC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGGGAGGCAGCCCAGTaGCAAAAATCAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALWEAAQ*QKSDEG
Trigger: TCCTTCATCTGATTTTTGCCACTGGGCTGCCTCCCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATCTTGTCACTGGTCTTaGCCAGCTCAAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALSCHWS*PAQTWP
Trigger: AGGCCATGTTTGAGCTGGCCAAGACCAGTGACAAGA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394570.7
3UTR CAA 72 bp CTTTTGTGGCCAAGCCTGACATACAGAATATGTTCTTaGATCTGCCCAGGGTACATTCTTTTGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLWPSLTYRICS*ICPGYILLWWH
Trigger: GTGCCACCACAAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGCCACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTGGGAACATTCTTATTaGGCAGGTTCAGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFWEHSY*AGSAPD
Trigger: ATCAGGCGCTGAACCTGCTCAATAAGAATGTTCCCA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGGTCAAACTTGCCCGTaGTATATTCCTCACAGATCT +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKGQTCP*YIPHRS
Trigger: AGATCTGTGAGGAATATATCACGGGCAAGTTTGACC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGGTCAAACTTGCCCGTaGTATATTCCTCACAGATCT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEGQTCP*YIPHRS
Trigger: AGATCTGTGAGGAATATATCACGGGCAAGTTTGACC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGATCTGTTTGAGCAGTaGCACTCCATTGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEDLFEQ*HSIGDD
Trigger: ATCATCACCAATGGAGTGTCACTGCTCAAACAGATC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGTCACTTGAGTCATCTTaGGGCACAGTTTCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKSLESS*GTVSCV
Trigger: CACACAAGAAACTGTGCCTCAAGATGACTCAAGTGA...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGCTATGATCCCTAGATaGCCTGACTCTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKAMIPR*PDSSGE
Trigger: TTCTCCTGAAGAGTCAGGTCATCTAGGGATCATAGC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAGCTATGATCCCTAGATaGCCTGACTCTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALAMIPR*PDSSGE
Trigger: TTCTCCTGAAGAGTCAGGTCATCTAGGGATCATAGC...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGATGGAAATGTGACCTaGGACATAGACATATCAGAG +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISDGNVT*DIDISE
Trigger: CTCTGATATGTCTATGTCTCAGGTCACATTTCCATC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGATGGAAATGTGACCTaGGACATAGACATATCAGAG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPDGNVT*DIDISE
Trigger: CTCTGATATGTCTATGTCTCAGGTCACATTTCCATC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAACAGAATATGTTCTTTaGTCTGCCCAGGGTACATTC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPTEYVL*SAQGTF
Trigger: GAATGTACCCTGGGCAGATCAAAGAACATATTCTGT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGTGGCAAAAATCAGATaGAGGAATTCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISVAKIR*RNSAFL
Trigger: GAGGAAAGCTGAATTCCTTCATCTGATTTTTGCCAC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATTTCAGCAAGGACGATaGTTTCGATCTGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALFQQGR*FRSALL
Trigger: CAAGAGGGCAGATCGAAAGCATCGTCCTTGCTGAAA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATTAGTGTCCAGAAGCTaGAGTAGCAAGGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKLVSRS*SSKATP
Trigger: TGGAGTAGCCTTGCTACTGCAGCTTCTGGACACTAA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGTAGTCTGTGCCACCTaGAGAGCCGAGCTTACAGAG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLVVCAT*RAELTE
Trigger: CTCTGTAAGCTCGGCTCTGCAGGTGGCACAGACTAC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATATTGCACAGCCACTTaGGACACTGTTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKYCTAT*DTVWPV
Trigger: AACTGGCCAAACAGTGTCGCAAGTGGCTGTGCAATA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACATCGTAGCTGTTGGTaGAGTTCACCAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLHRSCW*SSPGWW
Trigger: CCACCACCCTGGTGAACTGCACCAACAGCTACGATG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTGTTCCTCGGGCACATaGTGCTTGGAGAACTTGGCG +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICCSSGT*CLENLA
Trigger: CGCCAAGTTCTCCAAGCAGCATGTGCCCGAGGAACA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACATCCCTGGGAACTTTaGCGGGTTATTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKHPWEL*RVIENA
Trigger: AGCATTCTCAATAACCCGGCAAAGTTCCCAGGGATG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATATATGTTCTTTGATCTaGCCAGGGTACATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDICSLI*PGYILL
Trigger: CAAAAGAATGTACCCTGGGCAGATCAAAGAACATAT...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTCCCATACCGCAACAGTaGAACTCTCTGATAGTCTGT +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFPIPQQ*NSLIVC
Trigger: ACAGACTATCAGAGAGTTGCACTGTTGCGGTATGGG...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGTATTGGCTGTTCCTTaGTGTTTTTGGGCAAACTAC +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISVLAVP*CFWANY
Trigger: GTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATAC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCTGACACTGTCTGGATaGCATTCAAGTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKELTLSG*HSSSCP
Trigger: TGGACAAGAACTTGAATGCCATCCAGACAGTGTCAG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACACTGGTACCTGCCTTaGCCAGCTCAAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLHWYLP*PAQTWP
Trigger: AGGCCATGTTTGAGCTGGCCAAGGCAGGTACCAGTG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGAGAACTTGGCGAGCTaGACAAGCTCTGGGATGACC +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICENLAS*TSSGMT
Trigger: GGTCATCCCAGAGCTTGTCCAGCTCGCCAAGTTCTC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCATCTTTGCTAGAGCGTaGGCTGCCTTCACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICIFARA*AAFTLP
Trigger: GGGCAAGGTGAAGGCAGCCCACGCTCTAGCAAAGAT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGTAGTTCTCGATGTCTaGCAAGGCCCTCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFVVLDV*QGPLLK
Trigger: TTTAAGGAGAGGGCCTTGCCAGACATCGAGAACTAC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTTCAACCTATTATCCTaGCCTTCAGAATGGGTACAG +
Preference number: 4 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPFNLLS*PSEWVQ
Trigger: CTGTACCCATTCTGAAGGCCAGGATAATAGGTTGAA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCATGTCCATCTTGCTTaGAAGACTTTCCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISHVHLA*KTFPSK
Trigger: TTTGCTTGGGAAAGTCTTCCAAGCAAGATGGACATG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTATATGACCCAGGCCTaGCCAATTAGCATTCCACCT +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFYMTQA*PISIPP
Trigger: AGGTGGAATGCTAATTGGCCAGGCCTGGGTCATATA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGTATTATGTTGGATTTaGCCCATACCGCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKVLCWI*PIPQQC
Trigger: GCACTGTTGCGGTATGGGCCAAATCCAACATAATAC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACAGCGGGTATTATGTTaGATTTGGCCCATACCGCAA +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALQRVLC*IWPIPQ
Trigger: TTGCGGTATGGGCCAAATCCAACATAATACCCGCTG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATTATAAGAGTCTAGGCTaGAAAAGCCAACTACTTATG +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDYKSLG*KSQLLM
Trigger: CATAAGTAGTTGGCTTTTCCAGCCTAGACTCTTATA...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGTTCCTTGCTGTTTTTaGGCAAACTACCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDVPCCF*ANYLNK
Trigger: TTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAAC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACAGACACCTTCTTGCTaGCTAGCATGTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLQTPSC*LACPAG
Trigger: ACCTGCTGGACATGCTAGTCAGCAAGAAGGTGTCTG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAGATCTGTTTGAGCAGTaGCACTCCATTGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALDLFEQ*HSIGDD
Trigger: ATCATCACCAATGGAGTGTCACTGCTCAAACAGATC...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATCTTGTAGATCTGTTTaGGCAGTGACACTCCATTGG +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKSCRSV*AVTLHW
Trigger: CCAATGGAGTGTCACTGCTCAAACAGATCTACAAGA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTCTTGTAGATCTGTTTaGGCAGTGACACTCCATTGG +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFSCRSV*AVTLHW
Trigger: CCAATGGAGTGTCACTGCTCAAACAGATCTACAAGA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCCCTTGGTCTGGTCAGTaGGGATGGCACTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICPWSGQ*GWHYLL
Trigger: AAGCAGATAGTGCCATCCTCACTGACCAGACCAAGG...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACTATTTCCATCACAGTaGAGTGATGGGAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALLFPSQ*SDGNGH
Trigger: ATGCCCATTCCCATCACTTCACTGTGATGGAAATAG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGAGCCTGCCAGGGAATaGGACAAACCTATAATAAAT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEEPARE*DKPIIN
Trigger: ATTTATTATAGGTTTGTCTCATTCCCTGGCAGGCTC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGACAGAATATGTTCTTTaGTCTGCCCAGGGTACATTC +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKETEYVL*SAQGTF
Trigger: GAATGTACCCTGGGCAGATCAAAGAACATATTCTGT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATTTTGTGGCCAAGCCTaGCATACAGAATATGTTCTT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPFCGQA*HTEYVL
Trigger: AAGAACATATTCTGTATGTCAGGCTTGGCCACAAAA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATATAGTTTCCTGCTGTaGAACAAGCCCATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKYSFLL*NKPMQE
Trigger: CTCTTGCATGGGCTTGTTTCACAGCAGGAAACTATA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATGTCTATGGACATATTaGACAGCCACTTGCGACACT +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKCLWTY*TATCDT
Trigger: AGTGTCGCAAGTGGCTGTGCAATATGTCCATAGACA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGCACAGTTTCTTGTGTaGTGCTGTCAGCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLAQFLV*CCQHGQ
Trigger: CTGGCCATGCTGACAGCAGCACACAAGAAACTGTGC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACATCTGGCTCCTGTTTaGCCACCACAGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLHLAPV*PPQSGS
Trigger: AGATCCTGACTGTGGTGGGCAAACAGGAGCCAGATG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGCATTAACCTTTATATaGACACACCCGTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPALTFI*THPLVP
Trigger: AGGAACTAACGGGTGTGTGCATATAAAGGTTAATGC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAAAATTGCAGAGGTCATaGCCCACTGTTGAACATAAA +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPKLQRS*PTVEHK
Trigger: TTTATGTTCAACAGTGGGGCATGACCTCTGCAATTT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATCTCAGGCTAGCATCTaGCTATTTGAAAGCATAGAT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPSQASI*LFESID
Trigger: ATCTATGCTTTCAAATAGGCAGATGCTAGCCTGAGA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGGCTGTAGCTATTTGTaGCGGCCTTGTAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICGCSYL*RPCSPG
Trigger: TCCAGGACTACAAGGCCGCCACAAATAGCTACAGCC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGAGTCAATGATGGCTTaGAGCAGGTTGCAGACAGCC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLESMMA*SRLQTA
Trigger: GGCTGTCTGCAACCTGCTCCAAGCCATCATTGACTC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCAGTCCTTCTTGTCCTTaGGGTGTTCCTCGGGCACAT +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICSPSCP*GVPRAH
Trigger: ATGTGCCCGAGGAACACCCCAAGGACAAGAAGGACT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACTGATTCAAATAGTGTaGGAGAGAGGTCATGAAAAC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPLIQIV*ERGHEN
Trigger: GTTTTCATGACCTCTCTCCCACACTATTTGAATCAG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAAGAATTGGGACATACTaGAGTGACAGTACTAGATCT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPRIGTY*SDSTRS
Trigger: AGATCTAGTACTGTCACTCCAGTATGTCCCAATTCT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCAAAAACCTAGAAAGTTaGCAGGTATTGGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISKNLES*QVLAVP
Trigger: AGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CAA 72 bp CCTCTTCCATTAATACCCCTAATCAGTCCATGTCAATaGGACAGGGATGAAGCTCATTTCTTCCCTAGACTT +
Preference number: 4 (lower is better)
Translates to: PLPLIPLISPCQ*DRDEAHFFPRL
Trigger: AAGTCTAGGGAAGAAATGAGCTTCATCCCTGTCCAATTGACATGGACTGATTAGGGGTATTAATGGAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGTGGGAGAGAGGTCATaGAAACAGCACAGATCAGCA +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICVGERS*KQHRSA
Trigger: TGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCAC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGGTGGCCAAGATACATaGGCCAATGAATTATTTATT +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPGGQDT*ANELFI
Trigger: AATAAATAATTCATTGGCTCATGTATCTTGGCCACC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGGTGGCCAAGATACATaGGCCAATGAATTATTTATT +
Preference number: 4 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISGGQDT*ANELFI
Trigger: AATAAATAATTCATTGGCTCATGTATCTTGGCCACC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTTTTGTGGCCAAGCCTaGCATACAGAATATGTTCTT +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEFCGQA*HTEYVL
Trigger: AAGAACATATTCTGTATGTCAGGCTTGGCCACAAAA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTTATCTAACTGGCCCTaGACGCCACTGGCAGATGTA +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICLSNWP*TPLADV
Trigger: TACATCTGCCAGTGGCGTTCAGGGCCAGTTAGATAA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGTGGCAAAAATCAGATaGAGGAATTCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFVAKIR*RNSAFL
Trigger: GAGGAAAGCTGAATTCCTTCATCTGATTTTTGCCAC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTCTATCCGCACTGCATaGAGAATCACTGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICSIRTA*RITVAL
Trigger: CAGAGCCACAGTGATTCTGCATGCAGTGCGGATAGA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATCATCATGTCCATCTTaGTTGGAAGACTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKSSCPS*LEDFPK
Trigger: CTTGGGAAAGTCTTCCAAGCAAGATGGACATGATGA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTCATCATGTCCATCTTaGTTGGAAGACTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFSSCPS*LEDFPK
Trigger: CTTGGGAAAGTCTTCCAAGCAAGATGGACATGATGA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGTCTCAGGCTAGCATCTaGCTATTTGAAAGCATAGAT +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKSQASI*LFESID
Trigger: ATCTATGCTTTCAAATAGGCAGATGCTAGCCTGAGA...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGTATTGGCTGTTCCTTaGTGTTTTTGGGCAAACTAC +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKVLAVP*CFWANY
Trigger: GTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATAC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTATCCACCACATAGATaGTACGTGAGTTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEYPPHR*YVSCHE
Trigger: TTCATGACAACTCACGTACCATCTATGTGGTGGATA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATCCTGTACCTCCTTGTaGAGCACCATGTTGCACATG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLSCTSL*STMLHM
Trigger: CATGTGCAACATGGTGCTCCACAAGGAGGTACAGGA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACGCTGTCTAAGACACTaGTTTAATGAAACCATAATC +
Preference number: 4 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPRCLRH*FNETII
Trigger: GATTATGGTTTCATTAAACCAGTGTCTTAGACAGCG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACATGTCCATCTTGCTTaGAAGACTTTCCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKHVHLA*KTFPSK
Trigger: TTTGCTTGGGAAAGTCTTCCAAGCAAGATGGACATG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTGTGTCATTCTTTTGTaGCCAAGCCTGACATACAGA +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFCVILL*PSLTYR
Trigger: TCTGTATGTCAGGCTTGGCCACAAAAGAATGACACA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CAA 72 bp CATATCAGAGTCATCCCTGGGAACTTTGCCGGGTTATaGAGAATGCTCTTCTCTCTTCTATTCCATAATGAA +
Preference number: 4 (lower is better)
Translates to: HIRVIPGNFAGL*RMLFSLLFHNE
Trigger: TTCATTATGGAATAGAAGAGAGAAGAGCATTCTCAATAACCCGGCAAAGTTCCCAGGGATGACTCTGATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CAA 72 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTaGTCACAGCTTTTCTTAAAGGCCTCCCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRY*SQLFLKASHED
Trigger: GTCTTCATGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTTAGCAGAGAGGTTCTaGTCTACAGCATATTACTTG +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFLAERF*STAYYL
Trigger: CAAGTAATATGCTGTAGATCAGAACCTCTCTGCTAA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTACCGCTTCCACCTCTaGCATCTGTTTTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICYRFHL*HLFFSK
Trigger: CTTGCTGAAAAACAGATGGCAGAGGTGGAAGCGGTA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS-3UTR CCA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATATCCACCACATAGATaGTACGTGAGTTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKYPPHR*YVSCHE
Trigger: TTCATGACAACTCACGTACCATCTATGTGGTGGATA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCACTTGCGACACTGTTTaGCCAGTTTTTCTGTCGACC +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICTCDTV*PVFLST
Trigger: GGTCGACAGAAAAACTGGCCAAACAGTGTCGCAAGT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGTAGTTCTCGATGTCTaGCAAGGCCCTCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICVVLDV*QGPLLK
Trigger: TTTAAGGAGAGGGCCTTGCCAGACATCGAGAACTAC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACAGCGGGTATTATGTTaGATTTGGCCCATACCGCAA +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLQRVLC*IWPIPQ
Trigger: TTGCGGTATGGGCCAAATCCAACATAATACCCGCTG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGTTCCTTGCTGTTTTTaGGCAAACTACCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKVPCCF*ANYLNK
Trigger: TTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAAC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCCACATAGATGGTACGTaGGTTGTCATGAATGGCAAG +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICHIDGT*VVMNGK
Trigger: CTTGCCATTCATGACAACTCACGTACCATCTATGTG...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATCATTGTCACTGCTATaGTCCCTAGATGACCTGACT +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLSLSLL*SLDDLT
Trigger: AGTCAGGTCATCTAGGGATCATAGCAGTGACAATGA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGTCTTTCCTTTATATTaGGACTTCATTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFVFPLY*DFIVTA
Trigger: AGCAGTGACAATGAAGTCTCAATATAAAGGAAAGAC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGGGTACAGAAAGAATaGTCCAACCTATTTCTAATC +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALWVQKE*SNLFLI
Trigger: GATTAGAAATAGGTTGGATCATTCTTTCTGTACCCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTGTCTATGGACATATTaGACAGCCACTTGCGACACT +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICCLWTY*TATCDT
Trigger: AGTGTCGCAAGTGGCTGTGCAATATGTCCATAGACA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAATATGTTCTTTGATCTaGCCAGGGTACATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALICSLI*PGYILL
Trigger: CAAAAGAATGTACCCTGGGCAGATCAAAGAACATAT...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCCTGACACTGTCTGGATaGCATTCAAGTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICLTLSG*HSSSCP
Trigger: TGGACAAGAACTTGAATGCCATCCAGACAGTGTCAG...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACGCTGTCTAAGACACTaGTTTAATGAAACCATAATC +
Preference number: 4 (lower is better)
Translates to: WERGHENSTDQHPNTTALRCLRH*FNETII
Trigger: GATTATGGTTTCATTAAACCAGTGTCTTAGACAGCG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGACCTCTGAATATGATTaGTTCATAGATGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKTSEYD*FIDGNV
Trigger: CACATTTCCATCTATGAACCAATCATATTCAGAGGT...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTACATTCTTTTGTGGTaGCACACCTCTTCCATTAAT +
Preference number: 4 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFYILLW*HTSSIN
Trigger: ATTAATGGAAGAGGTGTGCCACCACAAAAGAATGTA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGTATTATGTTGGATTTaGCCCATACCGCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICVLCWI*PIPQQC
Trigger: GCACTGTTGCGGTATGGGCCAAATCCAACATAATAC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGAGCCTGCCAGGGAATaGGACAAACCTATAATAAAT +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICEPARE*DKPIIN
Trigger: ATTTATTATAGGTTTGTCTCATTCCCTGGCAGGCTC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACCAATCCAAACAAGATaGACTTTATCTAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLPIQTR*TLSNWP
Trigger: GGGCCAGTTAGATAAAGTTCATCTTGTTTGGATTGG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCCCAATCCAAACAAGATaGACTTTATCTAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICPIQTR*TLSNWP
Trigger: GGGCCAGTTAGATAAAGTTCATCTTGTTTGGATTGG...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATTCAACCTATTATCCTaGCCTTCAGAATGGGTACAG +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLFNLLS*PSEWVQ
Trigger: CTGTACCCATTCTGAAGGCCAGGATAATAGGTTGAA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
3UTR CAA 72 bp GGTTCTGATCTACAGCATATTACTTGTGTCATTCTTTaGTGGCCAAGCCTGACATACAGAATATGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GSDLQHITCVIL*WPSLTYRICSL
Trigger: CAAAGAACATATTCTGTATGTCAGGCTTGGCCACAAAAGAATGACACAAGTAATATGCTGTAGATCAGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGCATTAACCTTTATATaGACACACCCGTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLALTFI*THPLVP
Trigger: AGGAACTAACGGGTGTGTGCATATAAAGGTTAATGC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR GCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAATTGCAGAGGTCATaGCCCACTGTTGAACATAAA +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLKLQRS*PTVEHK
Trigger: TTTATGTTCAACAGTGGGGCATGACCTCTGCAATTT...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACTGATTCAAATAGTGTaGGAGAGAGGTCATGAAAAC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLLIQIV*ERGHEN
Trigger: GTTTTCATGACCTCTCTCCCACACTATTTGAATCAG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CCA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCAAAAACCTAGAAAGTTaGCAGGTATTGGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HENSTDQHPNTTALTFICKNLES*QVLAVP
Trigger: AGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGTCTTTCCTTTATATTaGGACTTCATTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLVFPLY*DFIVTA
Trigger: AGCAGTGACAATGAAGTCTCAATATAAAGGAAAGAC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR TCA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATGGGTACAGAAAGAATaGTCCAACCTATTTCTAATC +
Preference number: 4 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLWVQKE*SNLFLI
Trigger: GATTAGAAATAGGTTGGATCATTCTTTCTGTACCCA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS GCA 90 bp GGCTCTGGCTTGGTGGCCGCTGCACATGCCCGACAGGGTCCGCACTaGAGCCAGCACCAGCTCAGGCTTCTTAGTGTCCAGAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GSGLVAAAHARQGPH*SQHQLRLLSVQKLQ
Trigger: CTGCAGCTTCTGGACACTAAGAAGCCTGAGCTGGTGCTGGCTGCAGTGCGGACCCTGTCGGGCATGTGCAGCGGCCACCAAGCCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp TTCCGTGGCTCGAGGGTGGCACAACGCTGCACGTCTTTGAAGGCCTaGTCCAGCTTCCCCAGGTGCTCCAGTGCCTGGCATCGCCGATAC +
Preference number: 5 (lower is better)
Translates to: FRGSRVAQRCTSLKA*SSFPRCSSAWHRRY
Trigger: GTATCGGCGATGCCAGGCACTGGAGCACCTGGGGAAGCTGGACCAGGCCTTCAAAGACGTGCAGCGTTGTGCCACCCTCGAGCCACGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp AGCTCTCCGTTTTCAGGCCACAGGCTGCCCGGTTCCGATAAAGCGTaGCCAGCAGGGCCTTGTCCTTGGTCAGCTTCAGGGCCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: SSPFSGHRLPGSDKA*PAGPCPWSASGPGC
Trigger: ACAGCCAGGCCCTGAAGCTGACCAAGGACAAGGCCCTGCTGGCCACGCTTTATCGGAACCGGGCAGCCTGTGGCCTGAAAACGGAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp AGGCTGCCCGGTTCCGATAAAGCGTGGCCAGCAGGGCCTTGTCCTTaGTCAGCTTCAGGGCCTGGCTGTAGCTATTTGTGGCGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: RLPGSDKAWPAGPCP*SASGPGCSYLWRPC
Trigger: ACAAGGCCGCCACAAATAGCTACAGCCAGGCCCTGAAGCTGACCAAGGACAAGGCCCTGCTGGCCACGCTTTATCGGAACCGGGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 90 bp GCTTCTTGGCCAGCTCAGCATCGGCTGCCAGTAGGTTGTAGGCAATaGCCAGGCCCCGGTGTTGGACAGACAGCTGGTCGTGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: ASWPAQHRLPVGCRQ*PGPGVGQTAGRAGK
Trigger: TTTGCCTGCACGACCAGCTGTCTGTCCAACACCGGGGCCTGGTCATTGCCTACAACCTACTGGCAGCCGATGCTGAGCTGGCCAAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp CAGGGCCTTGCCACCACCTTGAGCCACAATGGTGCCTCGGTCCTTTaGGTTGTCACACAGTGCCAGGAATACCCTGGCCAGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: QGLATTLSHNGASVL*VVTQCQEYPGQQLL
Trigger: AAGGAGCTGCTGGCCAGGGTATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 90 bp CCTGGCCAGCAGCTCCTTGGTCTGGTCAGTGAGGATGGCACTATCTaGTTTCACCATGCAAGCCAGGGCAGAGATGACACCCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PGQQLLGLVSEDGTI*FHHASQGRDDTRLQ
Trigger: CTGAAGGCGGGTGTCATCTCTGCCCTGGCTTGCATGGTGAAAGCAGATAGTGCCATCCTCACTGACCAGACCAAGGAGCTGCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 90 bp AAGCCAGGGGAATCAGGGCCTTGCCACCACCTTGAGCCACAATGGTaGCTCGGTCCTTTGGGTTGTCACACAGTGCCAGGAATACCCTGG +
Preference number: 5 (lower is better)
Translates to: KPGESGPCHHLEPQW*LGPLGCHTVPGIPW
Trigger: CCAGGGTATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGCCCTGATTCCCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 90 bp GAGGCACAGTTTCTTGTGTGCTGCTGTCAGCATGGCCAGAGCCCCTaGAGCCGCATTCTGCACCTTATCATCATCCTCCCCGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: EAQFLVCCCQHGQSP*SRILHLIIILPAEQ
Trigger: CTGCTCTGCGGGGAGGATGATGATAAGGTGCAGAATGCGGCTGCAGGGGCTCTGGCCATGCTGACAGCAGCACACAAGAAACTGTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp GCTGGTGTTGAGTCTCCTCAGCATCTCCTGGAAGTTCTGGTTCCGTaGCTCGAGGGTGGCACAACGCTGCACGTCTTTGAAGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: AGVESPQHLLEVLVP*LEGGTTLHVFEGLV
Trigger: GACCAGGCCTTCAAAGACGTGCAGCGTTGTGCCACCCTCGAGCCACGGAACCAGAACTTCCAGGAGATGCTGAGGAGACTCAACACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp GATAGAGGCCAGCATGCGGGTGTTGTCAGTCAGGGGCAGGCAGGATaGCAGATCTGGAACCTGCCCCACAACCTTCAGGATCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: DRGQHAGVVSQGQAG*QIWNLPHNLQDLPQ
Trigger: CTGAGGAAGATCCTGAAGGTTGTGGGGCAGGTTCCAGATCTGCCATCCTGCCTGCCCCTGACTGACAACACCCGCATGCTGGCCTCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp CCAAAGCCAGGGGAATCAGGGCCTTGCCACCACCTTGAGCCACAATaGTGCCTCGGTCCTTTGGGTTGTCACACAGTGCCAGGAATACCC +
Preference number: 5 (lower is better)
Translates to: PKPGESGPCHHLEPQ*CLGPLGCHTVPGIP
Trigger: GGGTATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGCCCTGATTCCCCTGGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 90 bp AGGTCCTTCTTGGTGTCTAGAACCAGGGCCTCCTCCTTCCCTCGATaGTCCCGCTTGTCCTCCCCAGACAAGGAGTCAATGATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RSFLVSRTRASSFPR*SRLSSPDKESMMAW
Trigger: CCAAGCCATCATTGACTCCTTGTCTGGGGAGGACAAGCGGGAGCATCGAGGGAAGGAGGAGGCCCTGGTTCTAGACACCAAGAAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 90 bp ATGGTCTTGTCACTGGTACCTGCCTTGGCCAGCTCAAACATGGCCTaGAGGGCAGGGACGTCCTGGACAAAGTCGTCCTTCACATCAGCG +
Preference number: 5 (lower is better)
Translates to: MVLSLVPALASSNMA*RAGTSWTKSSFTSA
Trigger: CGCTGATGTGAAGGACGACTTTGTCCAGGACGTCCCTGCCCTGCAGGCCATGTTTGAGCTGGCCAAGGCAGGTACCAGTGACAAGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS CCA 90 bp GGGCCTTGTCCTTGGTCAGCTTCAGGGCCTGGCTGTAGCTATTTGTaGCGGCCTTGTAGTCCTGGAGCTGGAAATGCCGGTTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: GPCPWSASGPGCSYL*RPCSPGAGNAGFLP
Trigger: AGGAAGGAAACCGGCATTTCCAGCTCCAGGACTACAAGGCCGCCACAAATAGCTACAGCCAGGCCCTGAAGCTGACCAAGGACAAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 90 bp CGGGTGTTGTCAGTCAGGGGCAGGCAGGATGGCAGATCTGGAACCTaGCCCACAACCTTCAGGATCTTCCTCAGACCATTATCCACCACA +
Preference number: 5 (lower is better)
Translates to: RVLSVRGRQDGRSGT*PTTFRIFLRPLSTT
Trigger: TGTGGTGGATAATGGTCTGAGGAAGATCCTGAAGGTTGTGGGGCAGGTTCCAGATCTGCCATCCTGCCTGCCCCTGACTGACAACACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 90 bp CCACTGGGTTGTCACTTGAGTCATCTTGAGGCACAGTTTCTTGTGTaGTGCTGTCAGCATGGCCAGAGCCCCTGCAGCCGCATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PLGCHLSHLEAQFLV*CCQHGQSPCSRILH
Trigger: GTGCAGAATGCGGCTGCAGGGGCTCTGGCCATGCTGACAGCAGCACACAAGAAACTGTGCCTCAAGATGACTCAAGTGACAACCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp ACAGGATGGTCTTGTCACTGGTACCTGCCTTGGCCAGCTCAAACATaGCCTGCAGGGCAGGGACGTCCTGGACAAAGTCGTCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: TGWSCHWYLPWPAQT*PAGQGRPGQSRPSH
Trigger: ATGTGAAGGACGACTTTGTCCAGGACGTCCCTGCCCTGCAGGCCATGTTTGAGCTGGCCAAGGCAGGTACCAGTGACAAGACCATCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS CCA 90 bp AAAGCAATGTCCGGATTGGAGACAGCAGCGATCTTTGCTAGAGCGTaGGCTGCCTTCACCTTGCCCACATCTGTGCCCTCCAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: KAMSGLETAAIFARA*AAFTLPTSVPSKAR
Trigger: CCTGGCTTTGGAGGGCACAGATGTGGGCAAGGTGAAGGCAGCCCACGCTCTAGCAAAGATCGCTGCTGTCTCCAATCCGGACATTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCACTGTGGCTCTGGCTaGGTGGCCGCTGCACATGCC +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDHCGSG*VAAAHA
Trigger: GGCATGTGCAGCGGCCACCAAGCCAGAGCCACAGTG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGACCAGGCCCCGGTGTaGGACAGACAGCTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDDQAPV*DRQLVV
Trigger: CACGACCAGCTGTCTGTCCAACACCGGGGCCTGGTC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS TCA 90 bp CCATCTGTTTTTCAGCAAGGACGATGCTTTCGATCTGCCCTCTTGTaGTGCTGCTCCCCTGAGCACTCCTGTGTCAACCTCCAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: PSVFQQGRCFRSALL*CCSPEHSCVNLQPA
Trigger: GGCTGGCTGGAGGTTGACACAGGAGTGCTCAGGGGAGCAGCATCACAAGAGGGCAGATCGAAAGCATCGTCCTTGCTGAAAAACAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS GCA 90 bp GACACCTTCTTGCTGACTAGCATGTCCAGCAGGTGGCTGGTGATCTaGTTCAGGTCCTTCTTGGTGTCTAGAACCAGGGCCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: DTFLLTSMSSRWLVI*FRSFLVSRTRASSF
Trigger: GAAGGAGGAGGCCCTGGTTCTAGACACCAAGAAGGACCTGAAGCAGATCACCAGCCACCTGCTGGACATGCTAGTCAGCAAGAAGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 90 bp CTGGGTTGTCACTTGAGTCATCTTGAGGCACAGTTTCTTGTGTGCTaGTGTCAGCATGGCCAGAGCCCCTGCAGCCGCATTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: LGCHLSHLEAQFLVC*CQHGQSPCSRILHL
Trigger: AAGGTGCAGAATGCGGCTGCAGGGGCTCTGGCCATGCTGACAGCAGCACACAAGAAACTGTGCCTCAAGATGACTCAAGTGACAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCCTCGATGCTCCCGCTaGTCCTCCCCAGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDPRCSR*SSPDKE
Trigger: CTCCTTGTCTGGGGAGGACAAGCGGGAGCATCGAGG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS GCA 90 bp CCAAGAACCTTTCCTGTACCTCCTTGTGGAGCACCATGTTGCACATaGACTCGGTGGCCGCCTGCCGCAGCTGATCATGATTCTCAAACA +
Preference number: 5 (lower is better)
Translates to: PRTFPVPPCGAPCCT*TRWPPAAADHDSQT
Trigger: TGTTTGAGAATCATGATCAGCTGCGGCAGGCGGCCACCGAGTGCATGTGCAACATGGTGCTCCACAAGGAGGTACAGGAAAGGTTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCCACTGTGGCTCTGGCTaGGTGGCCGCTGCACATGCC +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISHCGSG*VAAAHA
Trigger: GGCATGTGCAGCGGCCACCAAGCCAGAGCCACAGTG...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCAGTCCCAGCAGCTGGTaGCCCAGGTCAAAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISSPSSW*PRSKGP
Trigger: GGGCCCCTTTGACCTGGGCAACCAGCTGCTGGGACT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATTGGTGCCTCGGTCCTTaGGGTTGTCACACAGTGCCA +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDWCLGP*GCHTVP
Trigger: TGGCACTGTGTGACAACCCAAAGGACCGAGGCACCA...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGGCCTTGCCACCACCTaGAGCCACAATGGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPGLATT*SHNGAS
Trigger: CGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGCC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGTGGCCAGCAGGGCCTaGTCCTTGGTCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKVASRA*SLVSFR
Trigger: CCTGAAGCTGACCAAGGACAAGGCCCTGCTGGCCAC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATAAGTCCTTCTTGTCCTaGGGGTGTTCCTCGGGCACA +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDKSFLS*GCSSGT
Trigger: TGTGCCCGAGGAACACCCCAAGGACAAGAAGGACTT...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAGACCAGGCCCCGGTGTaGGACAGACAGCTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKDQAPV*DRQLVV
Trigger: CACGACCAGCTGTCTGTCCAACACCGGGGCCTGGTC...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAAGCAGGGCCTTGTCCTaGGTCAGCTTCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: WERGHENSTDQHPNTTALSRALS*VSFRAW
Trigger: CCAGGCCCTGAAGCTGACCAAGGACAAGGCCCTGCT...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATTTGATGTCCGAGGAGTaGATGTCGATGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDLMSEE*MSMALE
Trigger: CTCCAGAGCCATCGACATCAACTCCTCGGACATCAA...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCACAACGCTGCACGTCTTaGAAGGCCTGGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPQRCTS*KAWSSF
Trigger: GAAGCTGGACCAGGCCTTCAAAGACGTGCAGCGTTG...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATCCTAGGACAATGAGATaGTTGGCAGCCTTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDPRTMR*LAAFSR
Trigger: GCGGGAAAAGGCTGCCAACAATCTCATTGTCCTAGG...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATGAGTACAGGATGGTCTaGTCACTGGTACCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDEYRMV*SLVPAL
Trigger: CAAGGCAGGTACCAGTGACAAGACCATCCTGTACTC...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS-3UTR CAA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCTGGCCAGCAGCTCCTaGGTCTGGTCAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKLASSS*VWSVRM
Trigger: CATCCTCACTGACCAGACCAAGGAGCTGCTGGCCAG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCTTGTGGAGCACCATGTaGCACATGCACTCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISLWSTM*HMHSVA
Trigger: GGCCACCGAGTGCATGTGCAACATGGTGCTCCACAA...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGATGGCTTGGAGCAGGTaGCAGACAGCCAGAGACATC +
Preference number: 5 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPMAWSR*QTARDI
Trigger: GATGTCTCTGGCTGTCTGCAACCTGCTCCAAGCCAT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAGGAGTCAATGATGGCTaGGAGCAGGTTGCAGACAGC +
Preference number: 5 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPGVNDG*EQVADS
Trigger: GCTGTCTGCAACCTGCTCCAAGCCATCATTGACTCC...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGGAGTCAATGATGGCTaGGAGCAGGTTGCAGACAGC +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISGVNDG*EQVADS
Trigger: GCTGTCTGCAACCTGCTCCAAGCCATCATTGACTCC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCATGGCCAGACACCTTCTaGCTGACTAGCATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPWPDTF*LTSMSS
Trigger: GCTGGACATGCTAGTCAGCAAGAAGGTGTCTGGCCA...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCAAGTCCTTCTTGTCCTaGGGGTGTTCCTCGGGCACA +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISKSFLS*GCSSGT
Trigger: TGTGCCCGAGGAACACCCCAAGGACAAGAAGGACTT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTCTGGCCAGCAGCTCCTaGGTCTGGTCAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFLASSS*VWSVRM
Trigger: CATCCTCACTGACCAGACCAAGGAGCTGCTGGCCAG...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAGACAGCAGCGATCTTaGCTAGAGCGTGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: WQVLAVPCCFWANYLNKERQQRS*LERGLP
Trigger: AGGCAGCCCACGCTCTAGCAAAGATCGCTGCTGTCT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCTCATCTGGCTCCTGTTaGCCCACCACAGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISSSGSC*PTTVRI
Trigger: GATCCTGACTGTGGTGGGCAAACAGGAGCCAGATGA...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGTCTTGTCACTGGTCTaGGCCAGCTCAAACATGGCC +
Preference number: 5 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPVLSLV*ASSNMA
Trigger: GGCCATGTTTGAGCTGGCCAAGACCAGTGACAAGAC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394570.7
CDS-3UTR CAA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCGCCGATACAGAGCCTaGATGTCCGAGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKRRYRA*MSEELM
Trigger: CATCAACTCCTCGGACATCAAGGCTCTGTATCGGCG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACAACGCTGCACGTCTTaGAAGGCCTGGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKQRCTS*KAWSSF
Trigger: GAAGCTGGACCAGGCCTTCAAAGACGTGCAGCGTTG...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCAGTCCCAGCAGCTGGTaGCCCAGGTCAAAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICSPSSW*PRSKGP
Trigger: GGGCCCCTTTGACCTGGGCAACCAGCTGCTGGGACT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATTCTATAAAGTCCTTCTaGTCCTTGGGGTGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDSIKSF*SLGCSS
Trigger: CGAGGAACACCCCAAGGACAAGAAGGACTTTATAGA...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACTCCGCCCAGACAGGTaGGTGAGGCCTAGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLLRPDR*VRPRRA
Trigger: GGCTCTCCTAGGCCTCACCAACCTGTCTGGGCGGAG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTATCTTCTGCCGGAGTTaGTCACTCCGCCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFIFCRS*SLRPDR
Trigger: CCTGTCTGGGCGGAGTGACAAACTCCGGCAGAAGAT...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGCCACTGGGTTGTCACTaGAGTCATCTTGAGGCACAG +
Preference number: 5 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPPLGCH*SHLEAQ
Trigger: CTGTGCCTCAAGATGACTCAAGTGACAACCCAGTGG...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGTCATCTGGCTCCTGTTaGCCCACCACAGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKSSGSC*PTTVRI
Trigger: GATCCTGACTGTGGTGGGCAAACAGGAGCCAGATGA...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGAGTACAGGATGGTCTaGTCACTGGTCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEEYRMV*SLVLAS
Trigger: GCTGGCCAAGACCAGTGACAAGACCATCCTGTACTC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394570.7
CDS TCA 90 bp CTTGATCTTCTCATTTTTGGTGGTCTTGTAGATCTGTTTGAGCAGTaGCACTCCATTGGTGATGATGAAGGTGGCGCGGCTGAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: LDLLIFGGLVDLFEQ*HSIGDDEGGAAELR
Trigger: ACGAAGCTCAGCCGCGCCACCTTCATCATCACCAATGGAGTGTCACTGCTCAAACAGATCTACAAGACCACCAAAAATGAGAAGATCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 90 bp TACAGGACCACTCCCAGCATCCCTGAGGGTCGCTGTCTAAGACACTaGTTTAATGAAACCATAATCCATGCACTTGATGAGACATTCTCG +
Preference number: 5 (lower is better)
Translates to: YRTTPSIPEGRCLRH*FNETIIHALDETFS
Trigger: CGAGAATGTCTCATCAAGTGCATGGATTATGGTTTCATTAAACCAGTGTCTTAGACAGCGACCCTCAGGGATGCTGGGAGTGGTCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTCCTGGCTGTAGCTATTaGTGGCGGCCTTGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFPGCSY*WRPCSP
Trigger: AGGACTACAAGGCCGCCACAAATAGCTACAGCCAGG...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCAGCAGGGCCTTGTCCTaGGTCAGCTTCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICSRALS*VSFRAW
Trigger: CCAGGCCCTGAAGCTGACCAAGGACAAGGCCCTGCT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACGCCGATACAGAGCCTaGATGTCCGAGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: WERGHENSTDQHPNTTALRRYRA*MSEELM
Trigger: CATCAACTCCTCGGACATCAAGGCTCTGTATCGGCG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACCTCGATGCTCCCGCTaGTCCTCCCCAGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLPRCSR*SSPDKE
Trigger: CTCCTTGTCTGGGGAGGACAAGCGGGAGCATCGAGG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTGCTTCAGGTCCTTCTaGGTGTCTAGAACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFCFRSF*VSRTRA
Trigger: GGCCCTGGTTCTAGACACCAAGAAGGACCTGAAGCA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTATGGCCAGACACCTTCTaGCTGACTAGCATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WERGHENSTDQHPNTTALWPDTF*LTSMSS
Trigger: GCTGGACATGCTAGTCAGCAAGAAGGTGTCTGGCCA...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAATGGCATTCAAGTTCTaGTCCATGTCCTGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPMAFKF*SMSWGS
Trigger: TGACCCCCAGGACATGGACAAGAACTTGAATGCCAT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGGTGTCTATGGACATATaGCACAGCCACTTGCGACAC +
Preference number: 5 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPVSMDI*HSHLRH
Trigger: GTGTCGCAAGTGGCTGTGCAATATGTCCATAGACAC...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTCCTCGGTCCTTTGGGTaGTCACACAGTGCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFPRSFG*SHSARN
Trigger: ATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGG...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGCTTTCCTGTACCTCCTaGTGGAGCACCATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKLSCTS*WSTMLH
Trigger: GTGCAACATGGTGCTCCACAAGGAGGTACAGGAAAG...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAAGGACAATGAGATTGTaGGCAGCCTTTTCCCGCTTA +
Preference number: 5 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPRTMRL*AAFSRL
Trigger: TAAGCGGGAAAAGGCTGCCAACAATCTCATTGTCCT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTACCTAGGACAATGAGATaGTTGGCAGCCTTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: WERGHENSTDQHPNTTALPRTMR*LAAFSR
Trigger: GCGGGAAAAGGCTGCCAACAATCTCATTGTCCTAGG...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAAGCAGTGACACTCCATaGGTGATGATGAAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: WERGHENSTDQHPNTTALSSDTP*VMMKVA
Trigger: CGCCACCTTCATCATCACCAATGGAGTGTCACTGCT...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAAGCAGTGACACTCCATaGGTGATGATGAAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKSSDTP*VMMKVA
Trigger: CGCCACCTTCATCATCACCAATGGAGTGTCACTGCT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGCACTTGCGACACTGTTaGGCCAGTTTTTCTGTCGAC +
Preference number: 5 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEHLRHC*ASFSVD
Trigger: GTCGACAGAAAAACTGGCCAAACAGTGTCGCAAGTG...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGTGTCTATGGACATATaGCACAGCCACTTGCGACAC +
Preference number: 5 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEVSMDI*HSHLRH
Trigger: GTGTCGCAAGTGGCTGTGCAATATGTCCATAGACAC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAGGACAATGAGATTGTaGGCAGCCTTTTCCCGCTTA +
Preference number: 5 (lower is better)
Translates to: WQVLAVPCCFWANYLNKERTMRL*AAFSRL
Trigger: TAAGCGGGAAAAGGCTGCCAACAATCTCATTGTCCT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAGGCCTCCCAAGCAAGGCTACTCCATaGTTCTGGAAGATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PRQWETKVFVTAFLKGLPSKATP*FWKIFS
Trigger: TGAGAAGATCTTCCAGAACAATGGAGTAGCCTTGCT...TGGGAGGCCTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGAGCAAGGCTACTCCATaGTTCTGGAAGATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPSKATP*FWKIFS
Trigger: TGAGAAGATCTTCCAGAACAATGGAGTAGCCTTGCT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAATGGCATTCAAGTTCTaGTCCATGTCCTGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKMAFKF*SMSWGS
Trigger: TGACCCCCAGGACATGGACAAGAACTTGAATGCCAT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCACCAGTGTGCGGATCTaGATCTTCTCATTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISTSVRI*IFSFLV
Trigger: CACCAAAAATGAGAAGATCAAGATCCGCACACTGGT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGACCAGTGTGCGGATCTaGATCTTCTCATTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPTSVRI*IFSFLV
Trigger: CACCAAAAATGAGAAGATCAAGATCCGCACACTGGT...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATGGTGCCTCGGTCCTTaGGGTTGTCACACAGTGCCA +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLWCLGP*GCHTVP
Trigger: TGGCACTGTGTGACAACCCAAAGGACCGAGGCACCA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCAGACAGCAGCGATCTTaGCTAGAGCGTGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICRQQRS*LERGLP
Trigger: AGGCAGCCCACGCTCTAGCAAAGATCGCTGCTGTCT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCATCTTCTGCCGGAGTTaGTCACTCCGCCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICIFCRS*SLRPDR
Trigger: CCTGTCTGGGCGGAGTGACAAACTCCGGCAGAAGAT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTATTGTGGAGCACCATGTaGCACATGCACTCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLLWSTM*HMHSVA
Trigger: GGCCACCGAGTGCATGTGCAACATGGTGCTCCACAA...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGGTCATGCCCCACTGTaGAACATAAACTCTATTTCC +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISGHAPL*NINSIS
Trigger: GGAAATAGAGTTTATGTTCAACAGTGGGGCATGACC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTACTTTCCCAAGCAAATaGCAGAGGTCATGCCCCACT +
Preference number: 5 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFTFPSK*QRSCPT
Trigger: AGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAGT...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAACAGCGGGTATTATGTaGGATTTGGCCCATACCGCA +
Preference number: 5 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKTAGIM*DLAHTA
Trigger: TGCGGTATGGGCCAAATCCAACATAATACCCGCTGT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGAAAGTTGGCAGGTATaGGCTGTTCCTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISESWQV*AVPCCF
Trigger: AAAACAGCAAGGAACAGCCAATACCTGCCAACTTTC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS TCA 90 bp CTTCAGGATCTTCCTCAGACCATTATCCACCACATAGATGGTACGTaGGTTGTCATGAATGGCAAGGTCCTTCCTGGGAACATTCTTATT +
Preference number: 5 (lower is better)
Translates to: LQDLPQTIIHHIDGT*VVMNGKVLPGNILI
Trigger: AATAAGAATGTTCCCAGGAAGGACCTTGCCATTCATGACAACTCACGTACCATCTATGTGGTGGATAATGGTCTGAGGAAGATCCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCCCTGGCTGTAGCTATTaGTGGCGGCCTTGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICPGCSY*WRPCSP
Trigger: AGGACTACAAGGCCGCCACAAATAGCTACAGCCAGG...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCATGGCTTGGAGCAGGTaGCAGACAGCCAGAGACATC +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICMAWSR*QTARDI
Trigger: GATGTCTCTGGCTGTCTGCAACCTGCTCCAAGCCAT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTGCTTCAGGTCCTTCTaGGTGTCTAGAACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICCFRSF*VSRTRA
Trigger: GGCCCTGGTTCTAGACACCAAGAAGGACCTGAAGCA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCCCTCGGTCCTTTGGGTaGTCACACAGTGCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICPRSFG*SHSARN
Trigger: ATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGG...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAAAAGCAATGTCCGGATaGGAGACAGCAGCGATCTTT +
Preference number: 5 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKKAMSG*ETAAIF
Trigger: AAAGATCGCTGCTGTCTCCAATCCGGACATTGCTTT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp ATGGGACTGGGACAGAGCACTGCAGGTGAAACACACAGTTCTGAACAGACTGATAGTCTTTCCTTTATATaGAGACTTCATTGTCACTGC +
Preference number: 5 (lower is better)
Translates to: MGLGQSTAGETHSSEQTDSLSFI*RLHCHC
Trigger: GCAGTGACAATGAAGTCTCAATATAAAGGAAAGACT...ATCAGTCTGTTCAGAACTGTGTGTTTCACCTGCAGTGCTCTGTCCCAGTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTGGTATTATGTTGGATTaGGCCCATACCGCAACAGTG +
Preference number: 5 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFGIMLD*AHTATV
Trigger: CACTGTTGCGGTATGGGCCAAATCCAACATAATACC...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAGGTATTATGTTGGATTaGGCCCATACCGCAACAGTG +
Preference number: 5 (lower is better)
Translates to: WERGHENSTDQHPNTTALGIMLD*AHTATV
Trigger: CACTGTTGCGGTATGGGCCAAATCCAACATAATACC...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGGGTATTGGCTGTTCCTaGCTGTTTTTGGGCAAACTA +
Preference number: 5 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEGIGCS*LFLGKL
Trigger: TAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACC...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTTGATGTCCGAGGAGTaGATGTCGATGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICLMSEE*MSMALE
Trigger: CTCCAGAGCCATCGACATCAACTCCTCGGACATCAA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACTTTCCTGTACCTCCTaGTGGAGCACCATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLLSCTS*WSTMLH
Trigger: GTGCAACATGGTGCTCCACAAGGAGGTACAGGAAAG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCCCACTGGGTTGTCACTaGAGTCATCTTGAGGCACAG +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICPLGCH*SHLEAQ
Trigger: CTGTGCCTCAAGATGACTCAAGTGACAACCCAGTGG...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGTTCATCATGTCCATCTaGCTTGGAAGACTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEFIMSI*LGRLSQ
Trigger: TTGGGAAAGTCTTCCAAGCAAGATGGACATGATGAA...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAAACTTGTGTCATTCTTTaGTGGCCAAGCCTGACATAC +
Preference number: 5 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKTCVIL*WPSLTY
Trigger: GTATGTCAGGCTTGGCCACAAAAGAATGACACAAGT...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GGTTTTAGTTCTCTAGAGGTACAGCGGGTATTATGTTGGATTTGGCCCATACCGTCTACAGCATATTACTaGTGTCATTCTTTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GFSSLEVQRVLCWIWPIPSTAYY*CHSFVA
Trigger: GGCCACAAAAGAATGACACAAGTAATATGCTGTAGA...CGGTATGGGCCAAATCCAACATAATACCCGCTGTACCTCTAGAGAACTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCAAGCACCACACCCTTTaGAATGTTGTCATTCTCTAT +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISKHHTL*NVVILY
Trigger: ATAGAGAATGACAACATTCAAAAGGGTGTGGTGCTT...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGGCAGGAAAGAAGAATTaGACAGAGGTCAAATCATGC +
Preference number: 5 (lower is better)
Translates to: VGRYWLFLAVFGQTTSIKAGKKN*TEVKSC
Trigger: GCATGATTTGACCTCTGTCAAATTCTTCTTTCCTGC...CTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGGAGAGAGGTCATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAGAAAGTTGGCAGGTATaGGCTGTTCCTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: WERGHENSTDQHPNTTALESWQV*AVPCCF
Trigger: AAAACAGCAAGGAACAGCCAATACCTGCCAACTTTC...TAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATGACCTCTCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTACACTTGCGACACTGTTaGGCCAGTTTTTCTGTCGAC +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLHLRHC*ASFSVD
Trigger: GTCGACAGAAAAACTGGCCAAACAGTGTCGCAAGTG...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCATATTGCACAGCCACTaGCGACACTGTTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICILHSH*RHCLAS
Trigger: ACTGGCCAAACAGTGTCGCAAGTGGCTGTGCAATAT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAATATTGCACAGCCACTaGCGACACTGTTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLILHSH*RHCLAS
Trigger: ACTGGCCAAACAGTGTCGCAAGTGGCTGTGCAATAT...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCACTTTCCCAAGCAAATaGCAGAGGTCATGCCCCACT +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICTFPSK*QRSCPT
Trigger: AGTGGGGCATGACCTCTGCAATTTGCTTGGGAAAGT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GCCAAGCCTGACATACAGAATATGTTCTTTGATCTGCCCAGGGTACATTCTTTTTTCATCATGTCCATCTaGCTTGGAAGACTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: AKPDIQNMFFDLPRVHSFFIMSI*LGRLSQ
Trigger: TTGGGAAAGTCTTCCAAGCAAGATGGACATGATGAA...AAAAGAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGCTTGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAACAGCGGGTATTATGTaGGATTTGGCCCATACCGCA +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLTAGIM*DLAHTA
Trigger: TGCGGTATGGGCCAAATCCAACATAATACCCGCTGT...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAACTACCTCAATAAAGAGAAGCACCACACCCTTTaGAATGTTGTCATTCTCTAT +
Preference number: 5 (lower is better)
Translates to: WQVLAVPCCFWANYLNKEKHHTL*NVVILY
Trigger: ATAGAGAATGACAACATTCAAAAGGGTGTGGTGCTT...CTCTTTATTGAGGTAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAGCTCATTTCTTCCCTAGACTTGTATATATGACCCAGGCCTGGCCAATTAGCGGGAAACAAAGGTATTaGTCACAGCTTTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: EAHFFPRLVYMTQAWPISGKQRY*SQLFLK
Trigger: CTTTAAGAAAAGCTGTGACAAATACCTTTGTTTCCC...GCTAATTGGCCAGGCCTGGGTCATATATACAAGTCTAGGGAAGAAATGAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCTCTATAAAGTCCTTCTaGTCCTTGGGGTGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICSIKSF*SLGCSS
Trigger: CGAGGAACACCCCAAGGACAAGAAGGACTTTATAGA...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAAAAGCAATGTCCGGATaGGAGACAGCAGCGATCTTT +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLKAMSG*ETAAIF
Trigger: AAAGATCGCTGCTGTCTCCAATCCGGACATTGCTTT...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp GAAAAACCTAGAAAGTTGGCAGGTATTGGCTGTTCCTTGCTGTTTTTGGGCAAATCTACAGCATATTACTaGTGTCATTCTTTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: EKPRKLAGIGCSLLFLGKSTAYY*CHSFVA
Trigger: GGCCACAAAAGAATGACACAAGTAATATGCTGTAGA...TTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGGTCATGCCCCACTGTaGAACATAAACTCTATTTCC +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLGHAPL*NINSIS
Trigger: GGAAATAGAGTTTATGTTCAACAGTGGGGCATGACC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCACTTGTGTCATTCTTTaGTGGCCAAGCCTGACATAC +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICTCVIL*WPSLTY
Trigger: GTATGTCAGGCTTGGCCACAAAAGAATGACACAAGT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGGTATTGGCTGTTCCTaGCTGTTTTTGGGCAAACTA +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICGIGCS*LFLGKL
Trigger: TAGTTTGCCCAAAAACAGCAAGGAACAGCCAATACC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCGAAAAACCTAGAAAGTaGGCAGGTATTGGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICEKPRK*AGIGCS
Trigger: GGAACAGCCAATACCTGCCAACTTTCTAGGTTTTTC...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp TACTTATGTAACCTAGGCAGTGGGAAACAAAGGTATTTGTCACAGCTTTTCTTAGCAGGAAAGAAGAATTaGACAGAGGTCAAATCATGC +
Preference number: 5 (lower is better)
Translates to: YLCNLGSGKQRYLSQLFLAGKKN*TEVKSC
Trigger: GCATGATTTGACCTCTGTCAAATTCTTCTTTCCTGC...TAAGAAAAGCTGTGACAAATACCTTTGTTTCCCACTGCCTAGGTTACATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS-3UTR CAA 90 bp CATGAAAACAGCACAGATCAGCATCCAAATACAACAGCATTAACCTTTATATGCACGGAACGTTGTAAATaGTTTTTATCAAGGACCGTA +
Preference number: 5 (lower is better)
Translates to: HENSTDQHPNTTALTFICTERCK*FLSRTV
Trigger: TACGGTCCTTGATAAAAACAATTTACAACGTTCCGT...GCATATAAAGGTTAATGCTGTTGTATTTGGATGCTGATCTGTGCTGTTTTCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS GCA 72 bp TGCCTGGACGTAGCTCTCCGTTTTCAGGCCACAGGCTaGCCGGTTCCGATAAAGCGTGGCCAGCAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: CLDVALRFQATG*PVPIKRGQQGL
Trigger: AAGGCCCTGCTGGCCACGCTTTATCGGAACCGGGCAGCCTGTGGCCTGAAAACGGAGAGCTACGTCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp GCTGTCAGCATGGCCAGAGCCCCTGCAGCCGCATTCTaGACCTTATCATCATCCTCCCCGCAGAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: AVSMARAPAAAF*TLSSSSPQSST
Trigger: GGTGCTGCTCTGCGGGGAGGATGATGATAAGGTGCAGAATGCGGCTGCAGGGGCTCTGGCCATGCTGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp ATGACCAGGCCCCGGTGTTGGACAGACAGCTGGTCGTaGAGGCAAAGCCGCTGGAGGATCTCCAACCACTGG +
Preference number: 6 (lower is better)
Translates to: MTRPRCWTDSWS*RQSRWRISNHW
Trigger: CCAGTGGTTGGAGATCCTCCAGCGGCTTTGCCTGCACGACCAGCTGTCTGTCCAACACCGGGGCCTGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp CCAGCTCAGCATCGGCTGCCAGTAGGTTGTAGGCAATaGCCAGGCCCCGGTGTTGGACAGACAGCTGGTCGT +
Preference number: 6 (lower is better)
Translates to: PAQHRLPVGCRQ*PGPGVGQTAGR
Trigger: ACGACCAGCTGTCTGTCCAACACCGGGGCCTGGTCATTGCCTACAACCTACTGGCAGCCGATGCTGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp AAGTTCTGGTTCCGTGGCTCGAGGGTGGCACAACGCTaGACGTCTTTGAAGGCCTGGTCCAGCTTCCCCAGG +
Preference number: 6 (lower is better)
Translates to: KFWFRGSRVAQR*TSLKAWSSFPR
Trigger: CCTGGGGAAGCTGGACCAGGCCTTCAAAGACGTGCAGCGTTGTGCCACCCTCGAGCCACGGAACCAGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp TTTTCAGGCCACAGGCTGCCCGGTTCCGATAAAGCGTaGCCAGCAGGGCCTTGTCCTTGGTCAGCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: FSGHRLPGSDKA*PAGPCPWSASG
Trigger: CCCTGAAGCTGACCAAGGACAAGGCCCTGCTGGCCACGCTTTATCGGAACCGGGCAGCCTGTGGCCTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp GCCAGCTCAAACATGGCCTGCAGGGCAGGGACGTCCTaGACAAAGTCGTCCTTCACATCAGCGTCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: ASSNMACRAGTS*TKSSFTSASSV
Trigger: CACGCTGGACGCTGATGTGAAGGACGACTTTGTCCAGGACGTCCCTGCCCTGCAGGCCATGTTTGAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS CAA 90 bp TCAGGGCCTTGCCACCACCTTGAGCCACAATGGTGCCTCGGTCCTTaGGGTTGTCACACAGTGCCAGGAATACCCTGGCCAGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: SGPCHHLEPQWCLGP*GCHTVPGIPWPAAP
Trigger: AGGAGCTGCTGGCCAGGGTATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp CAGCATGCGGGTGTTGTCAGTCAGGGGCAGGCAGGATaGCAGATCTGGAACCTGCCCCACAACCTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: QHAGVVSQGQAG*QIWNLPHNLQD
Trigger: ATCCTGAAGGTTGTGGGGCAGGTTCCAGATCTGCCATCCTGCCTGCCCCTGACTGACAACACCCGCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp GCCACCACCTTGAGCCACAATGGTGCCTCGGTCCTTTaGGTTGTCACACAGTGCCAGGAATACCCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: ATTLSHNGASVL*VVTQCQEYPGQ
Trigger: CTGGCCAGGGTATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp GGGGAATCAGGGCCTTGCCACCACCTTGAGCCACAATaGTGCCTCGGTCCTTTGGGTTGTCACACAGTGCCA +
Preference number: 6 (lower is better)
Translates to: GESGPCHHLEPQ*CLGPLGCHTVP
Trigger: TGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGCCCTGATTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp TCCGGATTGGAGACAGCAGCGATCTTTGCTAGAGCGTaGGCTGCCTTCACCTTGCCCACATCTGTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: SGLETAAIFARA*AAFTLPTSVPS
Trigger: GGAGGGCACAGATGTGGGCAAGGTGAAGGCAGCCCACGCTCTAGCAAAGATCGCTGCTGTCTCCAATCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 90 bp GCAGGGCCTTGTCCTTGGTCAGCTTCAGGGCCTGGCTGTAGCTATTaGTGGCGGCCTTGTAGTCCTGGAGCTGGAAATGCCGGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: AGPCPWSASGPGCSY*WRPCSPGAGNAGFL
Trigger: AAGGAAACCGGCATTTCCAGCTCCAGGACTACAAGGCCGCCACAAATAGCTACAGCCAGGCCCTGAAGCTGACCAAGGACAAGGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 90 bp AGCTTCCCCAGGTGCTCCAGTGCCTGGCATCGCCGATACAGAGCCTaGATGTCCGAGGAGTTGATGTCGATGGCTCTGGAGGCATCTGAA +
Preference number: 6 (lower is better)
Translates to: SFPRCSSAWHRRYRA*MSEELMSMALEASE
Trigger: TTCAGATGCCTCCAGAGCCATCGACATCAACTCCTCGGACATCAAGGCTCTGTATCGGCGATGCCAGGCACTGGAGCACCTGGGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 90 bp TTGGTGTCTAGAACCAGGGCCTCCTCCTTCCCTCGATGCTCCCGCTaGTCCTCCCCAGACAAGGAGTCAATGATGGCTTGGAGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LVSRTRASSFPRCSR*SSPDKESMMAWSRL
Trigger: CAACCTGCTCCAAGCCATCATTGACTCCTTGTCTGGGGAGGACAAGCGGGAGCATCGAGGGAAGGAGGAGGCCCTGGTTCTAGACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp ATGCTTTCGATCTGCCCTCTTGTGATGCTGCTCCCCTaGGCACTCCTGTGTCAACCTCCAGCCAGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: MLSICPLVMLLP*ALLCQPPASQP
Trigger: AGGCTGGCTGGCTGGAGGTTGACACAGGAGTGCTCAGGGGAGCAGCATCACAAGAGGGCAGATCGAAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS TCA 72 bp TGGCCAGTTTTTCTGTCGACCCTTCCGCAAACTGCCTaGGACCGTAGTCTGTGCCACCTGCAGAGCCGAGCT +
Preference number: 6 (lower is better)
Translates to: WPVFLSTLPQTA*DRSLCHLQSRA
Trigger: AGCTCGGCTCTGCAGGTGGCACAGACTACGGTCTCAGGCAGTTTGCGGAAGGGTCGACAGAAAAACTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS GCA 72 bp CACAATGGTGCCTCGGTCCTTTGGGTTGTCACACAGTaGCAGGAATACCCTGGCCAGCAGCTCCTTGGTCTG +
Preference number: 6 (lower is better)
Translates to: HNGASVLWVVTQ*QEYPGQQLLGL
Trigger: CAGACCAAGGAGCTGCTGGCCAGGGTATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp GAATCAGGGCCTTGCCACCACCTTGAGCCACAATGGTaGCTCGGTCCTTTGGGTTGTCACACAGTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: ESGPCHHLEPQW*LGPLGCHTVPG
Trigger: TCCTGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTGGTGGCAAGGCCCTGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp GGTTCCGATAAAGCGTGGCCAGCAGGGCCTTGTCCTTaGTCAGCTTCAGGGCCTGGCTGTAGCTATTTGTGG +
Preference number: 6 (lower is better)
Translates to: GSDKAWPAGPCP*SASGPGCSYLW
Trigger: CCACAAATAGCTACAGCCAGGCCCTGAAGCTGACCAAGGACAAGGCCCTGCTGGCCACGCTTTATCGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp TGCAGTTCACCAGGGTGGTGGCCACCGAGTACAGGATaGTCTTGTCACTGGTACCTGCCTTGGCCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: CSSPGWWPPSTG*SCHWYLPWPAQ
Trigger: TTGAGCTGGCCAAGGCAGGTACCAGTGACAAGACCATCCTGTACTCGGTGGCCACCACCCTGGTGAACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268876.9
CDS CCA 72 bp GGATGGTCTTGTCACTGGTCTTGGCCAGCTCAAACATaGCCTGCAGGGCAGGGACGTCCTGGACAAAGTCGT +
Preference number: 6 (lower is better)
Translates to: GWSCHWSWPAQT*PAGQGRPGQSR
Trigger: ACGACTTTGTCCAGGACGTCCCTGCCCTGCAGGCCATGTTTGAGCTGGCCAAGACCAGTGACAAGACCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394570.7
CDS CAA 72 bp AGGTGCTCCAGTGCCTGGCATCGCCGATACAGAGCCTaGATGTCCGAGGAGTTGATGTCGATGGCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: RCSSAWHRRYRA*MSEELMSMALE
Trigger: CTCCAGAGCCATCGACATCAACTCCTCGGACATCAAGGCTCTGTATCGGCGATGCCAGGCACTGGAGCACCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 72 bp TGCCACCACCTTGAGCCACAATGGTGCCTCGGTCCTTaGGGTTGTCACACAGTGCCAGGAATACCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: CHHLEPQWCLGP*GCHTVPGIPWP
Trigger: TGGCCAGGGTATTCCTGGCACTGTGTGACAACCCAAAGGACCGAGGCACCATTGTGGCTCAAGGTGGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 90 bp CGCTTGTCCTCCCCAGACAAGGAGTCAATGATGGCTTGGAGCAGGTaGCAGACAGCCAGAGACATCTCCTCATTCTCCACGGCCATGAGG +
Preference number: 6 (lower is better)
Translates to: RLSSPDKESMMAWSR*QTARDISSFSTAMR
Trigger: CCTCATGGCCGTGGAGAATGAGGAGATGTCTCTGGCTGTCTGCAACCTGCTCCAAGCCATCATTGACTCCTTGTCTGGGGAGGACAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp GATGCTCCCGCTTGTCCTCCCCAGACAAGGAGTCAATaGTGGCTTGGAGCAGGTTGCAGACAGCCAGAGACA +
Preference number: 6 (lower is better)
Translates to: DAPACPPQTRSQ*WLGAGCRQPET
Trigger: TGTCTCTGGCTGTCTGCAACCTGCTCCAAGCCATCATTGACTCCTTGTCTGGGGAGGACAAGCGGGAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp TCTGCCGGAGTTTGTCACTCCGCCCAGACAGGTTGGTaGGGCCTAGGAGAGCCTCATAGTTCTGAAGCCCAT +
Preference number: 6 (lower is better)
Translates to: SAGVCHSAQTGW*GLGEPHSSEAH
Trigger: ATGGGCTTCAGAACTATGAGGCTCTCCTAGGCCTCACCAACCTGTCTGGGCGGAGTGACAAACTCCGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp TTTCCTGTACCTCCTTGTGGAGCACCATGTTGCACATaGACTCGGTGGCCGCCTGCCGCAGCTGATCATGAT +
Preference number: 6 (lower is better)
Translates to: FPVPPCGAPCCT*TRWPPAAADHD
Trigger: ATCATGATCAGCTGCGGCAGGCGGCCACCGAGTGCATGTGCAACATGGTGCTCCACAAGGAGGTACAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp GAGTCTCCTCAGCATCTCCTGGAAGTTCTGGTTCCGTaGCTCGAGGGTGGCACAACGCTGCACGTCTTTGAA +
Preference number: 6 (lower is better)
Translates to: ESPQHLLEVLVP*LEGGTTLHVFE
Trigger: TTCAAAGACGTGCAGCGTTGTGCCACCCTCGAGCCACGGAACCAGAACTTCCAGGAGATGCTGAGGAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp CATACACCCGCTCCCCAGGAAAAGCAATGTCCGGATTaGAGACAGCAGCGATCTTTGCTAGAGCGTGGGCTG +
Preference number: 6 (lower is better)
Translates to: HTPAPQEKQCPD*RQQRSLLERGL
Trigger: CAGCCCACGCTCTAGCAAAGATCGCTGCTGTCTCCAATCCGGACATTGCTTTTCCTGGGGAGCGGGTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp TGCAGTTCACCAGGGTGGTGGCCACCGAGTACAGGATaGTCTTGTCACTGGTCTTGGCCAGCTCAAACATGG +
Preference number: 6 (lower is better)
Translates to: CSSPGWWPPSTG*SCHWSWPAQTW
Trigger: CCATGTTTGAGCTGGCCAAGACCAGTGACAAGACCATCCTGTACTCGGTGGCCACCACCCTGGTGAACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394570.7
CDS CAA 72 bp TGGCATCGCCGATACAGAGCCTTGATGTCCGAGGAGTaGATGTCGATGGCTCTGGAGGCATCTGAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: WHRRYRALMSEE*MSMALEASEAA
Trigger: GGCAGCTTCAGATGCCTCCAGAGCCATCGACATCAACTCCTCGGACATCAAGGCTCTGTATCGGCGATGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp CATGAATGGCAAGGTCCTTCCTGGGAACATTCTTATTaGGCAGGTTCAGCGCCTGATCCCTGCCCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: HEWQGPSWEHSY*AGSAPDPCPGQ
Trigger: CTGGCCAGGGCAGGGATCAGGCGCTGAACCTGCTCAATAAGAATGTTCCCAGGAAGGACCTTGCCATTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp GGAATACCCTGGCCAGCAGCTCCTTGGTCTGGTCAGTaGGGATGGCACTATCTGCTTTCACCATGCAAGCCA +
Preference number: 6 (lower is better)
Translates to: GIPWPAAPWSGQ*GWHYLLSPCKP
Trigger: TGGCTTGCATGGTGAAAGCAGATAGTGCCATCCTCACTGACCAGACCAAGGAGCTGCTGGCCAGGGTATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp TTGCTGACTAGCATGTCCAGCAGGTGGCTGGTGATCTaGTTCAGGTCCTTCTTGGTGTCTAGAACCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LLTSMSSRWLVI*FRSFLVSRTRA
Trigger: GGCCCTGGTTCTAGACACCAAGAAGGACCTGAAGCAGATCACCAGCCACCTGCTGGACATGCTAGTCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp TCAGTCAGGGGCAGGCAGGATGGCAGATCTGGAACCTaGCCCACAACCTTCAGGATCTTCCTCAGACCATTA +
Preference number: 6 (lower is better)
Translates to: SVRGRQDGRSGT*PTTFRIFLRPL
Trigger: TAATGGTCTGAGGAAGATCCTGAAGGTTGTGGGGCAGGTTCCAGATCTGCCATCCTGCCTGCCCCTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp CAGCTCCTTGGTCTGGTCAGTGAGGATGGCACTATCTaGTTTCACCATGCAAGCCAGGGCAGAGATGACACC +
Preference number: 6 (lower is better)
Translates to: QLLGLVSEDGTI*FHHASQGRDDT
Trigger: GGTGTCATCTCTGCCCTGGCTTGCATGGTGAAAGCAGATAGTGCCATCCTCACTGACCAGACCAAGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 72 bp TCACACAGTGCCAGGAATACCCTGGCCAGCAGCTCCTaGGTCTGGTCAGTGAGGATGGCACTATCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: SHSARNTLASSS*VWSVRMALSAF
Trigger: GAAAGCAGATAGTGCCATCCTCACTGACCAGACCAAGGAGCTGCTGGCCAGGGTATTCCTGGCACTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 72 bp TCATACACCCGCTCCCCAGGAAAAGCAATGTCCGGATaGGAGACAGCAGCGATCTTTGCTAGAGCGTGGGCT +
Preference number: 6 (lower is better)
Translates to: SYTRSPGKAMSG*ETAAIFARAWA
Trigger: AGCCCACGCTCTAGCAAAGATCGCTGCTGTCTCCAATCCGGACATTGCTTTTCCTGGGGAGCGGGTGTATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp TTTCAGCAAGGACGATGCTTTCGATCTGCCCTCTTGTaGTGCTGCTCCCCTGAGCACTCCTGTGTCAACCTC +
Preference number: 6 (lower is better)
Translates to: FQQGRCFRSALL*CCSPEHSCVNL
Trigger: GAGGTTGACACAGGAGTGCTCAGGGGAGCAGCATCACAAGAGGGCAGATCGAAAGCATCGTCCTTGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7
CDS TCA 72 bp TCTTCTCAGCCCCTGCTTCCTCACGGCCTAGGACAATaGGATTGTTGGCAGCCTTTTCCCGCTTATCAGCCT +
Preference number: 6 (lower is better)
Translates to: SSQPLLPHGLGQ*DCWQPFPAYQP
Trigger: AGGCTGATAAGCGGGAAAAGGCTGCCAACAATCTCATTGTCCTAGGCCGTGAGGAAGCAGGGGCTGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp AGACAGCCAGAGACATCTCCTCATTCTCCACGGCCATaGGGCTACAGATTCGGTCTATCCGCACTGCATGCA +
Preference number: 6 (lower is better)
Translates to: RQPETSPHSPRP*GYRFGLSALHA
Trigger: TGCATGCAGTGCGGATAGACCGAATCTGTAGCCTCATGGCCGTGGAGAATGAGGAGATGTCTCTGGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 72 bp TCCCCAGACAAGGAGTCAATGATGGCTTGGAGCAGGTaGCAGACAGCCAGAGACATCTCCTCATTCTCCACG +
Preference number: 6 (lower is better)
Translates to: SPDKESMMAWSR*QTARDISSFST
Trigger: CGTGGAGAATGAGGAGATGTCTCTGGCTGTCTGCAACCTGCTCCAAGCCATCATTGACTCCTTGTCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 72 bp GAAAAGCAATGTCCGGATTGGAGACAGCAGCGATCTTaGCTAGAGCGTGGGCTGCCTTCACCTTGCCCACAT +
Preference number: 6 (lower is better)
Translates to: EKQCPDWRQQRS*LERGLPSPCPH
Trigger: ATGTGGGCAAGGTGAAGGCAGCCCACGCTCTAGCAAAGATCGCTGCTGTCTCCAATCCGGACATTGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS GCA 72 bp GCCAGCACCAGCTCAGGCTTCTTAGTGTCCAGAAGCTaGAGTAGCAAGGCTACTCCATTGTTCTGGAAGATC +
Preference number: 6 (lower is better)
Translates to: ASTSSGFLVSRS*SSKATPLFWKI
Trigger: GATCTTCCAGAACAATGGAGTAGCCTTGCTACTGCAGCTTCTGGACACTAAGAAGCCTGAGCTGGTGCTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp GGATCTCCAACCACTGGGTTGTCACTTGAGTCATCTTaGGGCACAGTTTCTTGTGTGCTGCTGTCAGCATGG +
Preference number: 6 (lower is better)
Translates to: GSPTTGLSLESS*GTVSCVLLSAW
Trigger: CCATGCTGACAGCAGCACACAAGAAACTGTGCCTCAAGATGACTCAAGTGACAACCCAGTGGTTGGAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CAA 72 bp AGGATCCCTGACACTGTCTGGATGGCATTCAAGTTCTaGTCCATGTCCTGGGGGTCAAACTTGCCCGTGATA +
Preference number: 6 (lower is better)
Translates to: RIPDTVWMAFKF*SMSWGSNLPVI
Trigger: TATCACGGGCAAGTTTGACCCCCAGGACATGGACAAGAACTTGAATGCCATCCAGACAGTGTCAGGGATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp CTTCCTCAGACCATTATCCACCACATAGATGGTACGTaGGTTGTCATGAATGGCAAGGTCCTTCCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: LPQTIIHHIDGT*VVMNGKVLPGN
Trigger: GTTCCCAGGAAGGACCTTGCCATTCATGACAACTCACGTACCATCTATGTGGTGGATAATGGTCTGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS TCA 72 bp CTCATTTTTGGTGGTCTTGTAGATCTGTTTGAGCAGTaGCACTCCATTGGTGATGATGAAGGTGGCGCGGCT +
Preference number: 6 (lower is better)
Translates to: LIFGGLVDLFEQ*HSIGDDEGGAA
Trigger: AGCCGCGCCACCTTCATCATCACCAATGGAGTGTCACTGCTCAAACAGATCTACAAGACCACCAAAAATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp ACTGTCTGGATGGCATTCAAGTTCTTGTCCATGTCCTaGGGGTCAAACTTGCCCGTGATATATTCCTCACAG +
Preference number: 6 (lower is better)
Translates to: TVWMAFKFLSMS*GSNLPVIYSSQ
Trigger: CTGTGAGGAATATATCACGGGCAAGTTTGACCCCCAGGACATGGACAAGAACTTGAATGCCATCCAGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp TCAGGATCTTCCTCAGACCATTATCCACCACATAGATaGTACGTGAGTTGTCATGAATGGCAAGGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SGSSSDHYPPHR*YVSCHEWQGPS
Trigger: GGAAGGACCTTGCCATTCATGACAACTCACGTACCATCTATGTGGTGGATAATGGTCTGAGGAAGATCCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268876.9
ENST00000394570.7
ENST00000591048.2
CDS CCA 72 bp ACTCCCAGCATCCCTGAGGGTCGCTGTCTAAGACACTaGTTTAATGAAACCATAATCCATGCACTTGATGAG +
Preference number: 6 (lower is better)
Translates to: TPSIPEGRCLRH*FNETIIHALDE
Trigger: CTCATCAAGTGCATGGATTATGGTTTCATTAAACCAGTGTCTTAGACAGCGACCCTCAGGGATGCTGGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268876.9
ENST00000394570.7