RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC45A (Homo sapiens)

Ensembl gene IDs: ENSG00000140553

Ensembl transcript IDs: ENST00000394275.7, ENST00000418476.2, ENST00000461266.5, ENST00000471780.1, ENST00000480470.5, ENST00000486253.1, ENST00000487875.5, ENST00000495068.5, ENST00000497152.6, ENST00000554481.1, ENST00000556319.1, ENST00000556482.1, ENST00000556704.1, ENST00000557212.5, ENST00000639885.1, ENST00000672480.1

Found 679 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTCATCGCGGAGAGGTTGTCTCGTGCCCGCGCAGGCGCAGTCTCTaGGGCGGGGCGAGTCTGGGTTCGGGACGCCACCGGCAGCTGCCC +
Preference number: 1 (lower is better)
Translates to: SHRGEVVSCPRRRSL*GGASLGSGRHRQLP
Trigger: GGGCAGCTGCCGGTGGCGTCCCGAACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCCGCGATGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 90 bp CATCTCCGGGTTGGAGGTGATGGTGAGCTTGGCAAGGGCCTGGGCTaGCTTTGTCTGCCCCACGTCCGTGCCTTCCAGGGCCAGCGGGAT +
Preference number: 1 (lower is better)
Translates to: HLRVGGDGELGKGLG*LCLPHVRAFQGQRD
Trigger: ATCCCGCTGGCCCTGGAAGGCACGGACGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCCAAGCTCACCATCACCTCCAACCCGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 90 bp GGGCCTGAGTGTAGGCCGCCAGGGCGCCCCCGTAGTCTCCACATTTaGACAGCTCATTGCCCTCCTTCCGCAGCTGCTCCACTGAGCTGG +
Preference number: 1 (lower is better)
Translates to: GPECRPPGRPRSLHI*TAHCPPSAAAPLSW
Trigger: CCAGCTCAGTGGAGCAGCTGCGGAAGGAGGGCAATGAGCTGTTCAAATGTGGAGACTACGGGGGCGCCCTGGCGGCCTACACTCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 90 bp CTCGAGGCCTCCACCATGTTCAGCACCACCACAGCACCCCGGTGCTaGAGCTCCTGGTTGGAGCTCAGAAGCAGGGCCTGCAGGATCTCC +
Preference number: 1 (lower is better)
Translates to: LEASTMFSTTTAPRC*SSWLELRSRACRIS
Trigger: GGAGATCCTGCAGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGCACCGGGGTGCTGTGGTGGTGCTGAACATGGTGGAGGCCTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 90 bp TCCCTCGAGGCCTCCACCATGTTCAGCACCACCACAGCACCCCGGTaGTGCAGCTCCTGGTTGGAGCTCAGAAGCAGGGCCTGCAGGATC +
Preference number: 1 (lower is better)
Translates to: SLEASTMFSTTTAPR*CSSWLELRSRACRI
Trigger: GATCCTGCAGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGCACCGGGGTGCTGTGGTGGTGCTGAACATGGTGGAGGCCTCGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 90 bp AAGGTCATCTCCGGGTTGGAGGTGATGGTGAGCTTGGCAAGGGCCTaGGCTGCCTTTGTCTGCCCCACGTCCGTGCCTTCCAGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: KVISGLEVMVSLARA*AAFVCPTSVPSRAS
Trigger: GCTGGCCCTGGAAGGCACGGACGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCCAAGCTCACCATCACCTCCAACCCGGAGATGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 90 bp CTGATCCCAGCCAGGTTTGTTAGGGCCATGAGCGCCTCGAAGTTCTaGAGGCCTGAGCAGTTGAGGTGCAACAGGGAGACGAGGGGCCGG +
Preference number: 1 (lower is better)
Translates to: LIPARFVRAMSASKF*RPEQLRCNRETRGR
Trigger: CCGGCCCCTCGTCTCCCTGTTGCACCTCAACTGCTCAGGCCTGCAGAACTTCGAGGCGCTCATGGCCCTAACAAACCTGGCTGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 90 bp CTGAGTGAGGCTGCAGGCAGTGCTGGCCAAGCAGGGCTGTGTGACTaGACGTGGCCGCTGACTCAGAACAGAGGACATCCTAGGGCAGCA +
Preference number: 1 (lower is better)
Translates to: LSEAAGSAGQAGLCD*TWPLTQNRGHPRAA
Trigger: TGCTGCCCTAGGATGTCCTCTGTTCTGAGTCAGCGGCCACGTTCAGTCACACAGCCCTGCTTGGCCAGCACTGCCTGCAGCCTCACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR GCA 90 bp GCTCTCTGCAGGAACTGGTCAGCACAGGGCTCTCCGTCTTCACCATaGACACCATGGCCGACACCACACCCGCTGCCAGCAGCTTCTTCA +
Preference number: 1 (lower is better)
Translates to: ALCRNWSAQGSPSSP*TPWPTPHPLPAASS
Trigger: TGAAGAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGACGGAGAGCCCTGTGCTGACCAGTTCCTGCAGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 90 bp TCAAACATAACCTGCAGCAGGTGGCAGGCAGCCAGGGACACAGCCTaGCTTTCCACGCCCAGGATGGAGACTACTCGCCGAGTTCCCAGT +
Preference number: 1 (lower is better)
Translates to: SNITCSRWQAARDTA*LSTPRMETTRRVPS
Trigger: ACTGGGAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAAGCCAGGCTGTGTCCCTGGCTGCCTGCCACCTGCTGCAGGTTATGTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 90 bp GGACATCCTAGGGCAGCAAGCGAGGATGGGCAAGAGTATTGGGCATaGCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCGT +
Preference number: 1 (lower is better)
Translates to: GHPRAASEDGQEYWA*QPPPAKAASVLTLR
Trigger: ACGGAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCTGCCCTAGGATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR GCA 90 bp GCCTCCTGGAAAACTTTGTTCTTGGGCTCCAAGCTCACACATCTCTaGAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCTCTAGG +
Preference number: 1 (lower is better)
Translates to: ASWKTLFLGSKLTHL*RSRTAWSRRPSFSR
Trigger: CCTAGAGAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 90 bp CATCATCCTCTCCACTGTACAGCACCAGCAGCTTCAGTCGGTCATTaGCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCA +
Preference number: 1 (lower is better)
Translates to: HHPLHCTAPAASVGH*PGLRRGPAPPCSWP
Trigger: TGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGCTGCTGGTGCTGTACAGTGGAGAGGATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 90 bp GGCGGCCCAGCTTCTCTAGGGCTTGGCTCCGCCGGTAGAGTGCTTTaGCATCCCCACCATCCTTTTCAATGGCTTTGGATGCCTCTGTTT +
Preference number: 1 (lower is better)
Translates to: GGPASLGLGSAGRVL*HPHHPFQWLWMPLF
Trigger: AAACAGAGGCATCCAAAGCCATTGAAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGCCAAGCCCTAGAGAAGCTGGGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 90 bp CTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTACACATaGACTCCGTGGCTGCCCGGCGGATCATCTCATGCTCCTCAAACA +
Preference number: 1 (lower is better)
Translates to: LRRGPAPPCSWPSYT*TPWLPGGSSHAPQT
Trigger: TGTTTGAGGAGCATGAGATGATCCGCCGGGCAGCCACGGAGTGCATGTGTAACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 90 bp TTTTTGACACCTTCCTTGAGGGCATCAAACATAACCTGCAGCAGGTaGCAGGCAGCCAGGGACACAGCCTGGCTTTCCACGCCCAGGATG +
Preference number: 1 (lower is better)
Translates to: FLTPSLRASNITCSR*QAARDTAWLSTPRM
Trigger: CATCCTGGGCGTGGAAAGCCAGGCTGTGTCCCTGGCTGCCTGCCACCTGCTGCAGGTTATGTTTGATGCCCTCAAGGAAGGTGTCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 90 bp ACTGCTTTGTCCAGGCAGGCTGCAGCAGCCCTTGTGACAGGGCTGTaGTCACCCTTAGCTAGCACTGACAAGATCTCCATCATCTCACTC +
Preference number: 1 (lower is better)
Translates to: TALSRQAAAALVTGL*SPLASTDKISIISL
Trigger: GAGTGAGATGATGGAGATCTTGTCAGTGCTAGCTAAGGGTGACCACAGCCCTGTCACAAGGGCTGCTGCAGCCTGCCTGGACAAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 90 bp GATGCTCAGAGCAAATGCCAACCAGCGTACGCAGAGCCGCCAGCATaGGGTCAGTCTCTCCCATGTCCAGTAAACGTTGCAAGAGCTGAA +
Preference number: 1 (lower is better)
Translates to: DAQSKCQPAYAEPPA*GQSLPCPVNVARAE
Trigger: TTCAGCTCTTGCAACGTTTACTGGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCATTTGCTCTGAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 90 bp CCTTCTCTTCTGGGTCCAACAGTATCTGAAACATCTGTTCCACTTTaGCATCCGTCGAGGACATGTATCGCACCTTCTCCTGAATCTGGC +
Preference number: 1 (lower is better)
Translates to: PSLLGPTVSETSVPL*HPSRTCIAPSPESG
Trigger: GCCAGATTCAGGAGAAGGTGCGATACATGTCCTCGACGGATGCCAAAGTGGAACAGATGTTTCAGATACTGTTGGACCCAGAAGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp GCCCGCGCAGGCGCAGTCTCTGGGGCGGGGCGAGTCTGGGTTCGGGACGCCACCCTCTTGCGTCGGAGGTaGGGTCAGAGAGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ARAGAVSGAGRVWVRDATLLRRR*GQRGAG
Trigger: CCCTGCCCCTCTCTGACCCCACCTCCGACGCAAGAG...GGTGGCGTCCCGAACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCGCGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCGCAGGCGCAGTCTCTaGGGCGGGGCGAGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFRRRSL*GGASLG
Trigger: ACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCG...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp GGGCACCGCTTTAATCAGGAGGGTCAGGGCATTGTCTCGGCCTTGGCCAGAGACGCGGCCCGGTTCCGGTaGAGAACGGCCTGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: GHRFNQEGQGIVSALARDAARFR*RTAWSW
Trigger: CCAGGACCAGGCCGTTCTGCACCGGAACCGGGCCGC...GTCTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCCTGATTAAAGCGGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp CCGGTGCTGCAGCTCCTGGTTGGAGCTCAGAAGCAGGGCCTGCAGGATCTCCAGGCTCCAAGGCCCGGTTaGCAGCGTCACATGGGCCCT +
Preference number: 2 (lower is better)
Translates to: PVLQLLVGAQKQGLQDLQAPRPG*QRHMGP
Trigger: AGGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGC...CTGGAGATCCTGCAGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGCACCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACGCCACCGGCAGCTaGCCCGCCCCACTCTTGCGT +
Preference number: 2 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRDATGS*PAPLLR
Trigger: ACGCAAGAGTGGGGCGGGGCAGCTGCCGGTGGCGTC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp AAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCCAGGGGCGGGGCGCTTaGCTCTGGATCGCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: KLTHLCRSRTAWSRRPSFQGRGA*LWIAGA
Trigger: TGCACCTGCGATCCAGAGCCAAGCGCCCCGCCCCTG...GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGCGGTGCAGAACGGCCTaGTCCTGGGGCGTCGCGTCC +
Preference number: 2 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRRCRTA*SWGVAS
Trigger: GGACGCGACGCCCCAGGACCAGGCCGTTCTGCACCG...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGGCCCTGCCGCCTCCCTaGGCAACCACAGTGCCTCGG +
Preference number: 2 (lower is better)
Translates to: LIDPLAREGHLRVGGDGEALPPP*ATTVPR
Trigger: CCGAGGCACTGTGGTTGCCCAGGGAGGCGGCAGGGC...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTCCAAGCAGGGCTGTGTaGCTGAACGTGGCCGCTGAC +
Preference number: 2 (lower is better)
Translates to: GEAADVCALPDAPGSTGCPSRAV*LNVAAD
Trigger: GTCAGCGGCCACGTTCAGTCACACAGCCCTGCTTGG...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR TCA 90 bp ATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCATGTCCCCGCAGCTGCTCCACTaGGCTGGCAGTCATCGCGGA +
Preference number: 2 (lower is better)
Translates to: MPTSVRRAASMRSVSPMSPQLLH*AGSHRG
Trigger: TCCGCGATGACTGCCAGCTCAGTGGAGCAGCTGCGG...GGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp CAGGACACCGTCTGGATGGCCCGTAGCTTCCCGGCCAGCCCTTGGCCCTCAAACCAGGCTGTGTTGGGATaGACCTTCCCCATTCCCAGC +
Preference number: 2 (lower is better)
Translates to: QDTVWMARSFPASPWPSNQAVLG*TFPIPS
Trigger: GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTG...GTTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp AAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCGCTCTGGATCGCAGGTaGAGGCAAGCTCCGGGCGCA +
Preference number: 2 (lower is better)
Translates to: KLTHLCRSRTAWSRRPSFALDRR*RQAPGA
Trigger: TGCGCCCGGAGCTTGCCTGCACCTGCGATCCAGAGC...GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGCAGGGCTGTGTGACTaGACGTGGCCGCTGACTCAG +
Preference number: 2 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSAGLCD*TWPLTQ
Trigger: CTGAGTCAGCGGCCACGTTCAGTCACACAGCCCTGC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR TCA 90 bp AAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCCGTAATCTTCCAGCTTaGGGTGGCAGGCGGCCCGGT +
Preference number: 2 (lower is better)
Translates to: KLTHLCRSRTAWSRRPSFRNLPA*GGRRPG
Trigger: ACCGGGCCGCCTGCCACCTCAAGCTGGAAGATTACG...GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp GAGCTTGCTGAGGAGAATAGAGGCGCTCATGCGGCTGTTTGCGGTCACTGCGAGCGGGGCGCTTGGCTCTaGATCGCAGGTGCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: ELAEENRGAHAAVCGHCERGAWL*IAGAGK
Trigger: CTTGCCTGCACCTGCGATCCAGAGCCAAGCGCCCCG...CTCGCAGTGACCGCAAACAGCCGCATGAGCGCCTCTATTCTCCTCAGCAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGCAGGGCTGTGTGACTaGACGTGGCCGCTGACTCAG +
Preference number: 2 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRAGLCD*TWPLTQ
Trigger: CTGAGTCAGCGGCCACGTTCAGTCACACAGCCCTGC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR TCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGAAAAAGGGCCCCTCTaGGTGAGGCTGCAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSEKGPL*VRLQAV
Trigger: CACTGCCTGCAGCCTCACTCAGAGGGGCCCTTTTTC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR TCA 90 bp CAGGGAGACGAGGGGCCGGACCACCTCATAGATCCGCTCGCCAGGGAAGGTCATGCCACTGTCCGTGACTaGTGCTCAGAGCAAATGCCA +
Preference number: 2 (lower is better)
Translates to: QGDEGPDHLIDPLAREGHATVRD*CSEQMP
Trigger: TGGCATTTGCTCTGAGCATCAGTCACGGACAGTGGC...ATGACCTTCCCTGGCGAGCGGATCTATGAGGTGGTCCGGCCCCTCGTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGAGGTCAAGGACAGCCTaGTCCAGGCGGCCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LIDPLAREGHLRVGGDGERSRTA*SRRPSF
Trigger: GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCT...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTACTGAACGTGGCCGCTaGCTCAGAACAGAGGACATC +
Preference number: 2 (lower is better)
Translates to: GEAADVCALPDAPGSTGCTERGR*LRTEDI
Trigger: GATGTCCTCTGTTCTGAGTCAGCGGCCACGTTCAGT...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR TCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCCAAGCAGGGCTGTGTaGCTGAACGTGGCCGCTGAC +
Preference number: 2 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLPSRAV*LNVAAD
Trigger: GTCAGCGGCCACGTTCAGTCACACAGCCCTGCTTGG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR TCA 90 bp CTTGGCATACTTGGCCAGCTCCACCATCTTGGGGTCGGGCTCCTCGTAGTCATACCAAGCAGGGCTGTGTaGCTGAACGTGGCCGCTGAC +
Preference number: 2 (lower is better)
Translates to: LGILGQLHHLGVGLLVVIPSRAV*LNVAAD
Trigger: GTCAGCGGCCACGTTCAGTCACACAGCCCTGCTTGG...TATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTACCACCAGCCAAAGCTaGTTCCGTCCTTACTCTCCG +
Preference number: 2 (lower is better)
Translates to: GEAADVCALPDAPGSTGCTTSQS*FRPYSP
Trigger: CGGAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGT...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGCTGCAGCTCCTGGTTaGAGCTCAGAAGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRAAAPG*SSEAGP
Trigger: AGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 90 bp AGACCTTGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTaGAGAGACTTCCGGGGCACCGCTTTAATCAGGAGGGTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RPWSMTQRVRLLLGS*RDFRGTALIRRVRA
Trigger: TGCCCTGACCCTCCTGATTAAAGCGGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAACTGAACGTGGCCGCTaGCTCAGAACAGAGGACATC +
Preference number: 2 (lower is better)
Translates to: RPDSRLTAGEAADVCALPTERGR*LRTEDI
Trigger: GATGTCCTCTGTTCTGAGTCAGCGGCCACGTTCAGT...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR TCA 90 bp ATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCATGTCCACTGAACGTGGCCGCTaGCTCAGAACAGAGGACATC +
Preference number: 2 (lower is better)
Translates to: MPTSVRRAASMRSVSPMSTERGR*LRTEDI
Trigger: GATGTCCTCTGTTCTGAGTCAGCGGCCACGTTCAGT...GGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAACAATAGGTAGCGTGTaGATGAGCCTTGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RPDSRLTAGEAADVCALPTIGSV*MSLGPR
Trigger: CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGT...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR GCA 90 bp ATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCATGTCCACCACCAGCCAAAGCTaGTTCCGTCCTTACTCTCCG +
Preference number: 2 (lower is better)
Translates to: MPTSVRRAASMRSVSPMSTTSQS*FRPYSP
Trigger: CGGAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGT...GGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp CATCCTCCACAAACTCTTCCTTCACGTCGGCATCAAAGGTCAGGTAAGCCAGGCGGAGAGGTTGTCTCGTaGCCGCGCAGGCGCAGTCTC +
Preference number: 2 (lower is better)
Translates to: HPPQTLPSRRHQRSGKPGGEVVS*PRRRSL
Trigger: GAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCC...GCCTGGCTTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp TGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGGCCGAGTTCCCAGTATaGTCAGGGTTGCCACTGTCC +
Preference number: 2 (lower is better)
Translates to: WSMTQRVRLLLGSLRDFRAEFPV*SGLPLS
Trigger: GGACAGTGGCAACCCTGAGCATACTGGGAACTCGGC...CCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp TCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATTGGCAGTGAGAACGGCCTGGTCCTaGGGCGTCGCGTCCAGACCC +
Preference number: 2 (lower is better)
Translates to: SFSLHLYRSFSSETPLAVRTAWS*GVASRP
Trigger: GGGTCTGGACGCGACGCCCCAGGACCAGGCCGTTCT...CACTGCCAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp CTTGGCATACTTGGCCAGCTCCACCATCTTGGGGTCGGGCTCCTCGTAGTCATATTCCCGGCCAGCCCTTaGCCCTCAAACCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: LGILGQLHHLGVGLLVVIFPASP*PSNQLL
Trigger: CAAGAGCTGGTTTGAGGGCCAAGGGCTGGCCGGGAA...TATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp TCCGTCTTCACCATGCACACCATGGCCGACACCACACCCGCTGCCAGCAGCTTCCGTAGTCATAGCTGTTaGTGCAGTTCACCAGCGCTG +
Preference number: 2 (lower is better)
Translates to: SVFTMHTMADTTPAASSFRSHSC*CSSPAL
Trigger: CAGCGCTGGTGAACTGCACCAACAGCTATGACTACG...GAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp GTTACTGATGAGGACCTTCAGCTCCCGGGCAGGATCCACAATGATGGCACCTTCGAAAAAGGGCCCCTCTaGGTGAGGCTGCAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: VTDEDLQLPGRIHNDGTFEKGPL*VRLQAV
Trigger: CACTGCCTGCAGCCTCACTCAGAGGGGCCCTTTTTC...GAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATCAGTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp CAGGGAGACGAGGGGCCGGACCACCTCATAGATCCGCTCGCCAGGGAAGGTCATAGCACCACCAGGTTCTaGGAAGCCTTTTGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: QGDEGPDHLIDPLAREGHSTTRF*EAFCFF
Trigger: GAAAAAGCAAAAGGCTTCTCAGAACCTGGTGGTGCT...ATGACCTTCCCTGGCGAGCGGATCTATGAGGTGGTCCGGCCCCTCGTCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCACAATAGGTAGCGTGTaGATGAGCCTTGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SKRGWARVLGMPATTSQSTIGSV*MSLGPR
Trigger: CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGT...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR GCA 90 bp CAGGACACCGTCTGGATGGCCCGTAGCTTCCCGGCCAGCCCTTGGCCCTCAAACGGATGCCTCTGTTTCTaGTTTGTCGTAATCTTCCAG +
Preference number: 2 (lower is better)
Translates to: QDTVWMARSFPASPWPSNGCLCF*FVVIFQ
Trigger: CTGGAAGATTACGACAAAGCAGAAACAGAGGCATCC...GTTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp CTTGGCATACTTGGCCAGCTCCACCATCTTGGGGTCGGGCTCCTCGTAGTCATAGCTCCGCCGGTAGAGTaGTTTGACATCCCCACCATC +
Preference number: 2 (lower is better)
Translates to: LGILGQLHHLGVGLLVVIAPPVE*FDIPTI
Trigger: GATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGC...TATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp GTGATGAATGAGGCCCGCTTAGCCTTGCCGGCTGCATGGATCAGAGCCTCCACGGATGCTCAGAGCAAATaGCAACCAGCGTACGCAGAG +
Preference number: 2 (lower is better)
Translates to: VMNEARLALPAAWIRASTDAQSK*QPAYAE
Trigger: CTCTGCGTACGCTGGTTGGCATTTGCTCTGAGCATC...CGTGGAGGCTCTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTCATTCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp CAGGGAGACGAGGGGCCGGACCACCTCATAGATCCGCTCGCCAGGGAAGGTCATAGCCACTTTCGACACTaGTTAGCCAGTTTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: QGDEGPDHLIDPLAREGHSHFRH*LASLRV
Trigger: CACTCTCAAACTGGCTAAGCAGTGTCGAAAGTGGCT...ATGACCTTCCCTGGCGAGCGGATCTATGAGGTGGTCCGGCCCCTCGTCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp TCCGTCTTCACCATGCACACCATGGCCGACACCACACCCGCTGCCAGCAGCTTCCGTCGATCTGGTCATTaGACAGCCACTTTCGACACT +
Preference number: 2 (lower is better)
Translates to: SVFTMHTMADTTPAASSFRRSGH*TATFDT
Trigger: AGTGTCGAAAGTGGCTGTGCAATGACCAGATCGACG...GAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 90 bp ATCTGGCCCCCGATGTTCCGCAAGGCCTCCTGGAAAACTTTGTTCTaGGGCTCCAAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGG +
Preference number: 2 (lower is better)
Translates to: IWPPMFRKASWKTLF*GSKLTHLCRSRTAW
Trigger: CCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCAGGAGGCCTTGCGGAACATCGGGGGCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGCAAGAGTATTGGGCATaGCAGCCACCACCAGCCAAA +
Preference number: 2 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRQEYWA*QPPPAK
Trigger: TTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTG...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR GCA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTTGGAGAGCAGCTCTCTaGAGGAACTGGTCAGCACAG +
Preference number: 2 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVWRAAL*RNWSAQ
Trigger: CTGTGCTGACCAGTTCCTGCAGAGAGCTGCTCTCCA...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 90 bp TCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATaGGCAGTGATGAATGAGGCCCGCTTAGCCTTGCCGGCTGCATGG +
Preference number: 2 (lower is better)
Translates to: SFSLHLYRSFSSETP*AVMNEARLALPAAW
Trigger: CCATGCAGCCGGCAAGGCTAAGCGGGCCTCATTCATCACTGCCAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 90 bp CACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTaGTCCAGGCAGGCTGCAGCAGCCCTTGTGACAGGGCTGTGGTCA +
Preference number: 2 (lower is better)
Translates to: HSPSWLGWISPYSTA*SRQAAAALVTGLWS
Trigger: TGACCACAGCCCTGTCACAAGGGCTGCTGCAGCCTGCCTGGACAAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTTCTCCTCCAACCTGCTaGGCTGGAACAGAGCTTTCA +
Preference number: 2 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVSPPTC*AGTELS
Trigger: TGAAAGCTCTGTTCCAGCTCAGCAGGTTGGAGGAGA...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGATGGGCAAGAGTATTaGGCATGCCAGCCACCACCA +
Preference number: 2 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADDGQEY*ACQPPP
Trigger: TGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR CCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGGCAGCAAGCGAGGATaGGCAAGAGTATTGGGCATG +
Preference number: 2 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADGSKRG*ARVLGM
Trigger: CATGCCCAATACTCTTGCCCATCCTCGCTTGCTGCC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR TCA 90 bp CTCCCTGGGCAACCACAGTGCCTCGGTCCTCTACCTCTTCCACTAAAGCCAAGACGTAGTCTCCACATTTaGACAGCTCATTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: LPGQPQCLGPLPLPLKPRRSLHI*TAHCPP
Trigger: AGGAGGGCAATGAGCTGTTCAAATGTGGAGACTACG...TCTTGGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp GTTACTGATGAGGACCTTCAGCTCCCGGGCAGGATCCACAATGATGGCACCTTCGCCGGTAGAGTGCTTTaGCATCCCCACCATCCTTTT +
Preference number: 2 (lower is better)
Translates to: VTDEDLQLPGRIHNDGTFAGRVL*HPHHPF
Trigger: AAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGC...GAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTGCAGAGCCGCCAGCATaGGGTCAGTCTCTCCCATGT +
Preference number: 2 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFAEPPA*GQSLPC
Trigger: ACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGC...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGTGTAGCCTTCTATCATaGGCACAGCCTTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRCSLLS*AQPSPS
Trigger: TGAAGGAGAAGGCTGTGCCCATGATAGAAGGCTACA...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTCTTAGCCTTGCCGGCTaGATGGATCAGAGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFLSLAG*MDQSLH
Trigger: GTGGAGGCTCTGATCCATGCAGCCGGCAAGGCTAAG...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTAGCGCCTCGAAGTTCTaGAGGCCTGAGCAGTTGAGG +
Preference number: 2 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFSASKF*RPEQLR
Trigger: CCTCAACTGCTCAGGCCTGCAGAACTTCGAGGCGCT...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp CTTGGCATACTTGGCCAGCTCCACCATCTTGGGGTCGGGCTCCTCGTAGTCATATCTACACACTTTTATTaGAGGGGCAGGCCTGATAGC +
Preference number: 2 (lower is better)
Translates to: LGILGQLHHLGVGLLVVISTHFY*RGRPDS
Trigger: GCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGA...TATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp AGCCTGGCTTTCCACGCCCAGGATGGAGACTACTCGCCGAGTTCCCAGTATGCTGGAAAACTTTGTTCTTaGGCTCCAAGCTCACACATC +
Preference number: 2 (lower is better)
Translates to: SLAFHAQDGDYSPSSQYAGKLCS*APSSHI
Trigger: GATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCC...AGCATACTGGGAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAAGCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR TCA 90 bp TCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATTGGCAGTGGGTTGCCACTGTCCGTaGCTGATGCTCAGAGCAAAT +
Preference number: 2 (lower is better)
Translates to: SFSLHLYRSFSSETPLAVGCHCP*LMLRAN
Trigger: ATTTGCTCTGAGCATCAGTCACGGACAGTGGCAACC...CACTGCCAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 90 bp GCAGGATCCACAATGATGGCACCTTCTTTGCCTCGGAAGCCTTTTTaGACACCTTCCTTGAGGGCATCAAACATAACCTGCAGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: AGSTMMAPSLPRKPF*TPSLRASNITCSRW
Trigger: CCACCTGCTGCAGGTTATGTTTGATGCCCTCAAGGAAGGTGTCAAAAAAGGCTTCCGAGGCAAAGAAGGTGCCATCATTGTGGATCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR GCA 90 bp ATGCTGTCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATTGAAGCTCACACATCTCTaGAGGTCAAGGACAGCCTGG +
Preference number: 2 (lower is better)
Translates to: MLSFSLHLYRSFSSETPLKLTHL*RSRTAW
Trigger: CCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT...CAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp TCTCTTCTGGGTCCAACAGTATCTGAAACATCTGTTCCACTTTGGCATCCGTCGGATGGGCAAGAGTATTaGGCATGCCAGCCACCACCA +
Preference number: 2 (lower is better)
Translates to: SLLGPTVSETSVPLWHPSDGQEY*ACQPPP
Trigger: TGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATC...CGACGGATGCCAAAGTGGAACAGATGTTTCAGATACTGTTGGACCCAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CCA 90 bp CTTGGCATACTTGGCCAGCTCCACCATCTTGGGGTCGGGCTCCTCGTAGTCATACCTTTTCAATGGCTTTaGATGCCTCTGTTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: LGILGQLHHLGVGLLVVIPFQWL*MPLFLL
Trigger: AAGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGG...TATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 90 bp TCGATCTGGTCATTGCACAGCCACTTTCGACACTGCTTAGCCAGTTaGAGAGTGGAGCCTTCAGCAAACTGCTTCATGCTGAAGTCAGTC +
Preference number: 2 (lower is better)
Translates to: SIWSLHSHFRHCLAS*RVEPSANCFMLKSV
Trigger: GACTGACTTCAGCATGAAGCAGTTTGCTGAAGGCTCCACTCTCAAACTGGCTAAGCAGTGTCGAAAGTGGCTGTGCAATGACCAGATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp GGAGAGGTTGTCTCGTGCCCGCGCAGGCGCAGTCTCTaGGGCGGGGCGAGTCTGGGTTCGGGACGCCACCGG +
Preference number: 3 (lower is better)
Translates to: GEVVSCPRRRSL*GGASLGSGRHR
Trigger: CCGGTGGCGTCCCGAACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp TCTTCCAGCTTGAGGTGGCAGGCGGCCCGGTTCCGGTaGAGAACGGCCTGGTCCTGGGGCGTCGCGTCCAGA +
Preference number: 3 (lower is better)
Translates to: SSSLRWQAARFR*RTAWSWGVASR
Trigger: TCTGGACGCGACGCCCCAGGACCAGGCCGTTCTGCACCGGAACCGGGCCGCCTGCCACCTCAAGCTGGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp GTTGGAGGTGATGGTGAGCTTGGCAAGGGCCTGGGCTaGCTTTGTCTGCCCCACGTCCGTGCCTTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: VGGDGELGKGLG*LCLPHVRAFQG
Trigger: GCCCTGGAAGGCACGGACGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCCAAGCTCACCATCACCTCCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp TCCGGGTTGGAGGTGATGGTGAGCTTGGCAAGGGCCTaGGCTGCCTTTGTCTGCCCCACGTCCGTGCCTTCC +
Preference number: 3 (lower is better)
Translates to: SGLEVMVSLARA*AAFVCPTSVPS
Trigger: GGAAGGCACGGACGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCCAAGCTCACCATCACCTCCAACCCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp CAGGACACCGTCTGGATGGCCCGTAGCTTCCCGGCCAGCCCTTGGCCCTCAAACCAGAGGGTGAGGCTGTaGTTGGGGTCCTTGAGAGAC +
Preference number: 3 (lower is better)
Translates to: QDTVWMARSFPASPWPSNQRVRL*LGSLRD
Trigger: GTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTG...GTTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGAGCTCCAAGGCCCGGTaGCCAGCGTCACATGGGCCC +
Preference number: 3 (lower is better)
Translates to: LIDPLAREGHLRVGGDGESSKAR*PASHGP
Trigger: GGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGCT...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCGGATGGGCAAGAGTATaGGGCATGCCAGCCACCACC +
Preference number: 3 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFGWARV*GMPATT
Trigger: GGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCC...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR CAA 90 bp CATCCTCCACAAACTCTTCCTTCACGTCGGCATCAAAGGTCAGGTAAGCCAGGCGCAGGGGCGGGGCGCTaGGCTCTGGATCGCAGGTGC +
Preference number: 3 (lower is better)
Translates to: HPPQTLPSRRHQRSGKPGAGAGR*ALDRRC
Trigger: GCACCTGCGATCCAGAGCCAAGCGCCCCGCCCCTGC...GCCTGGCTTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 72 bp TGTAGGCCGCCAGGGCGCCCCCGTAGTCTCCACATTTaGACAGCTCATTGCCCTCCTTCCGCAGCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: CRPPGRPRSLHI*TAHCPPSAAAP
Trigger: TGGAGCAGCTGCGGAAGGAGGGCAATGAGCTGTTCAAATGTGGAGACTACGGGGGCGCCCTGGCGGCCTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp AGGAACTGGTCAGCACAGGGCTCTCCGTCTTCACCATaGACACCATGGCCGACACCACACCCGCTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: RNWSAQGSPSSP*TPWPTPHPLPA
Trigger: TGCTGGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGACGGAGAGCCCTGTGCTGACCAGTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp CAGCCAGGGACACAGCCTGGCTTTCCACGCCCAGGATaGAGACTACTCGCCGAGTTCCCAGTATGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: QPGTQPGFPRPG*RLLAEFPVCSG
Trigger: CCCTGAGCATACTGGGAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAAGCCAGGCTGTGTCCCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 72 bp CTGGCCAAGCAGGGCTGTGTGACTGAACGTGGCCGCTaGCTCAGAACAGAGGACATCCTAGGGCAGCAAGCG +
Preference number: 3 (lower is better)
Translates to: LAKQGCVTERGR*LRTEDILGQQA
Trigger: CGCTTGCTGCCCTAGGATGTCCTCTGTTCTGAGTCAGCGGCCACGTTCAGTCACACAGCCCTGCTTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR TCA 72 bp CCTGCTCAGAGGCACACAGAGCAATCACACTCTCCATaGCACCGCTCAGCTCCAAGGCCCGGTTGCCAGCGT +
Preference number: 3 (lower is better)
Translates to: PAQRHTEQSHSP*HRSAPRPGCQR
Trigger: ACGCTGGCAACCGGGCCTTGGAGCTGAGCGGTGTCATGGAGAGTGTGATTGCTCTGTGTGCCTCTGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp TCAGCACAGGGCTCTCCGTCTTCACCATGCACACCATaGCCGACACCACACCCGCTGCCAGCAGCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: SAQGSPSSPCTP*PTPHPLPAASS
Trigger: TGAAGAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGACGGAGAGCCCTGTGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp CGCCCAGGATGGAGACTACTCGCCGAGTTCCCAGTATaGTCAGGGTTGCCACTGTCCGTGACTGATGCTCAG +
Preference number: 3 (lower is better)
Translates to: RPGWRLLAEFPV*SGLPLSVTDAQ
Trigger: CTGAGCATCAGTCACGGACAGTGGCAACCCTGAGCATACTGGGAACTCGGCGAGTAGTCTCCATCCTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp GCCAGGTTTGTTAGGGCCATGAGCGCCTCGAAGTTCTaGAGGCCTGAGCAGTTGAGGTGCAACAGGGAGACG +
Preference number: 3 (lower is better)
Translates to: ARFVRAMSASKF*RPEQLRCNRET
Trigger: CGTCTCCCTGTTGCACCTCAACTGCTCAGGCCTGCAGAACTTCGAGGCGCTCATGGCCCTAACAAACCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp GGTCCTGCACCTCCTTGCTCATGGCCAAGTTACACATaGACTCCGTGGCTGCCCGGCGGATCATCTCATGCT +
Preference number: 3 (lower is better)
Translates to: GPAPPCSWPSYT*TPWLPGGSSHA
Trigger: AGCATGAGATGATCCGCCGGGCAGCCACGGAGTGCATGTGTAACTTGGCCATGAGCAAGGAGGTGCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp CTCCACTGTACAGCACCAGCAGCTTCAGTCGGTCATTaGCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: LHCTAPAASVGH*PGLRRGPAPPC
Trigger: GCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGCTGCTGGTGCTGTACAGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGGATGGGCAAGAGTATaGGGCATGCCAGCCACCACC +
Preference number: 3 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLGWARV*GMPATT
Trigger: GGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR-3UTR CAA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTGTCATCGCGGAGAGGTaGTCTCGTGCCCGCGCAGGC +
Preference number: 3 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFVIAER*SRARAG
Trigger: GCCTGCGCGGGCACGAGACAACCTCTCCGCGATGAC...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp TGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGCCAGTATGCTCAGGGTaGCCACTGTCCGTGACTGAT +
Preference number: 3 (lower is better)
Translates to: WSMTQRVRLLLGSLRDFRPVCSG*PLSVTD
Trigger: ATCAGTCACGGACAGTGGCAACCCTGAGCATACTGG...CCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp CATCCTCCACAAACTCTTCCTTCACGTCGGCATCAAAGGTCAGGTAAGCCAGGCGAGGCCCGCTTAGCCTaGCCGGCTGCATGGATCAGA +
Preference number: 3 (lower is better)
Translates to: HPPQTLPSRRHQRSGKPGEARLA*PAAWIR
Trigger: TCTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTC...GCCTGGCTTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 72 bp GTCCTTCAGCAGCGAGACACCATTGGCAGTGATGAATaGGGCCCGCTTAGCCTTGCCGGCTGCATGGATCAG +
Preference number: 3 (lower is better)
Translates to: VLQQRDTIGSDE*GPLSLAGCMDQ
Trigger: CTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTCATTCATCACTGCCAATGGTGTCTCGCTGCTGAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp CCACATTTGAACAGCTCATTGCCCTCCTTCCGCAGCTaGTCCACTGAGCTGGCAGTCATCGCGGAGAGGTTG +
Preference number: 3 (lower is better)
Translates to: PHLNSSLPSFRS*STELAVIAERL
Trigger: CAACCTCTCCGCGATGACTGCCAGCTCAGTGGAGCAGCTGCGGAAGGAGGGCAATGAGCTGTTCAAATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp CTGTACAGCACCAGCAGCTTCAGTCGGTCATTGCCCTaGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATG +
Preference number: 3 (lower is better)
Translates to: LYSTSSFSRSLP*ASKRSCTSLLM
Trigger: CATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGCTGCTGGTGCTGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp TCCAGGCAGGCTGCAGCAGCCCTTGTGACAGGGCTGTaGTCACCCTTAGCTAGCACTGACAAGATCTCCATC +
Preference number: 3 (lower is better)
Translates to: SRQAAAALVTGL*SPLASTDKISI
Trigger: GATGGAGATCTTGTCAGTGCTAGCTAAGGGTGACCACAGCCCTGTCACAAGGGCTGCTGCAGCCTGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGGCCTCCTGGAAAACTTaGTTCTTGGGCTCCAAGCTC +
Preference number: 3 (lower is better)
Translates to: LIDPLAREGHLRVGGDGEASWKT*FLGSKL
Trigger: GAGCTTGGAGCCCAAGAACAAAGTTTTCCAGGAGGC...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTAGGGTGAGGCTGTTGTaGGGGTCCTTGAGAGACTTC +
Preference number: 3 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVRVRLL*GSLRDF
Trigger: GAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCT...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp CCGAACCGAGCTTACAGAGTCCCACTAGCGCCCGGATaGGGATGCTGTCCTTCTCGCTGCACTTATATAGGT +
Preference number: 3 (lower is better)
Translates to: PNRAYRVPLAPG*GCCPSRCTYIG
Trigger: ACCTATATAAGTGCAGCGAGAAGGACAGCATCCGCATCCGGGCGCTAGTGGGACTCTGTAAGCTCGGTTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTCGCACGAAGCTTGGCTaGTCCTTGGGGTGCTGCTCG +
Preference number: 3 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFRTKLG*SLGCCS
Trigger: CGAGCAGCACCCCAAGGACAAGCCAAGCTTCGTGCG...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 72 bp AGCAAATGCCAACCAGCGTACGCAGAGCCGCCAGCATaGGGTCAGTCTCTCCCATGTCCAGTAAACGTTGCA +
Preference number: 3 (lower is better)
Translates to: SKCQPAYAEPPA*GQSLPCPVNVA
Trigger: TGCAACGTTTACTGGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCATTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp CGAGCTTACAGAGTCCCACTAGCGCCCGGATGCGGATaGTGTCCTTCTCGCTGCACTTATATAGGTCCTTCA +
Preference number: 3 (lower is better)
Translates to: RAYRVPLAPGCG*CPSRCTYIGPS
Trigger: TGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCATCCGCATCCGGGCGCTAGTGGGACTCTGTAAGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp CCTTGGGCCCAGGGACAACCCCCTCACTCTCCATCTTaGTTGGGTTGGATAAGCCCATATTCCACTGCTTTG +
Preference number: 3 (lower is better)
Translates to: PWAQGQPPHSPS*LGWISPYSTAL
Trigger: CAAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGTTGTCCCTGGGCCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR TCA 72 bp GCTTCTCTAGGGCTTGGCTCCGCCGGTAGAGTGCTTTaGCATCCCCACCATCCTTTTCAATGGCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: ASLGLGSAGRVL*HPHHPFQWLWM
Trigger: CATCCAAAGCCATTGAAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGCCAAGCCCTAGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp TGCTTAGCCAGTTTGAGAGTGGAGCCTTCAGCAAACTaGTTCATGCTGAAGTCAGTCCCTCCAGCCGAACCG +
Preference number: 3 (lower is better)
Translates to: CLASLRVEPSAN*FMLKSVPPAEP
Trigger: CGGTTCGGCTGGAGGGACTGACTTCAGCATGAAGCAGTTTGCTGAAGGCTCCACTCTCAAACTGGCTAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp CAGGGACAACCCCCTCACTCTCCATCTTGGTTGGGTTaGATAAGCCCATATTCCACTGCTTTGTCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: QGQPPHSPSWLG*ISPYSTALSRQ
Trigger: CTGCCTGGACAAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGTTGTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp TCCATCATCTCACTCTCCATCAGGGTGCTGGCAATCTCCCTCGAGGCCTCCACCTCCTTTTCAATGGCTTaGGATGCCTCTGTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: SIISLSIRVLAISLEASTSFSMA*DASVSA
Trigger: AGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGGA...GGTGGAGGCCTCGAGGGAGATTGCCAGCACCCTGATGGAGAGTGAGATGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp CTTGGCATACTTGGCCAGCTCCACCATCTTGGGGTCGGGCTCCTCGTAGTCATAGTTCTGAGAAGCCTTTaGCTTTTTCTCAGTGCCCTT +
Preference number: 3 (lower is better)
Translates to: LGILGQLHHLGVGLLVVIVLRSL*LFLSAL
Trigger: AAGGGCACTGAGAAAAAGCAAAAGGCTTCTCAGAAC...TATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGTTTTTGACACCTTCCTaGAGGGCATCAAACATAACC +
Preference number: 3 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRFLTPS*RASNIT
Trigger: GGTTATGTTTGATGCCCTCAAGGAAGGTGTCAAAAA...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp CCCACCTCTGTCAGCAGATCTAAGAGGTTACTGATGAGGACCTTCAGCTCCCGGTGGAAAACTTTGTTCTaGGGCTCCAAGCTCACACAT +
Preference number: 3 (lower is better)
Translates to: PTSVSRSKRLLMRTFSSRWKTLF*GSKLTH
Trigger: ATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCA...CCGGGAGCTGAAGGTCCTCATCAGTAACCTCTTAGATCTGCTGACAGAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR-3UTR CAA 90 bp ATGCTGTCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATTGAACATCTGTTCCACTTaGGCATCCGTCGAGGACATG +
Preference number: 3 (lower is better)
Translates to: MLSFSLHLYRSFSSETPLNICST*ASVEDM
Trigger: CATGTCCTCGACGGATGCCAAAGTGGAACAGATGTT...CAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CCA 72 bp CTGGGTCCAACAGTATCTGAAACATCTGTTCCACTTTaGCATCCGTCGAGGACATGTATCGCACCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: LGPTVSETSVPL*HPSRTCIAPSP
Trigger: AGGAGAAGGTGCGATACATGTCCTCGACGGATGCCAAAGTGGAACAGATGTTTCAGATACTGTTGGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR GCA 72 bp ACCATCCTTTTCAATGGCTTTGGATGCCTCTGTTTCTaGTTTGTCGTAATCTTCCAGCTTGAGGTGGCAGGC +
Preference number: 3 (lower is better)
Translates to: TILFNGFGCLCF*FVVIFQLEVAG
Trigger: GCCTGCCACCTCAAGCTGGAAGATTACGACAAAGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCGCGCAGGCGCAGTCTCTGGGGCGGGGCGAGTCTGGGTTCGGGACGCCACCGCGGGATCAGCGCCCTaGCGCCTCCCTGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: ARAGAVSGAGRVWVRDATAGSAP*RLPGQP
Trigger: TGGTTGCCCAGGGAGGCGGCAGGGCGCTGATCCCGC...GGTGGCGTCCCGAACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCGCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CAGGACACCGTCTGGATGGCCCGTAGCTTCCCGGCCAGCCCTTGGCCCTCAAACGACGCCACCGGCAGCTaGCCCGCCCCACTCTTGCGT +
Preference number: 4 (lower is better)
Translates to: QDTVWMARSFPASPWPSNDATGS*PAPLLR
Trigger: ACGCAAGAGTGGGGCGGGGCAGCTGCCGGTGGCGTC...GTTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCACCGCAGCTGCTCCACTaGGCTGGCCCCGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPPQLLH*AGPGGG
Trigger: GCCACCCCCGGGGCCAGCTCAGTGGAGCAGCTGCGG...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418476.2
CDS-3UTR TCA 90 bp GCTGGCAGTCATCGCGGAGAGGTTGTCTCGTGCCCGCGCAGGCGCAGTCTCTGGCGTAATCTTCCAGCTTaGGGTGGCAGGCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: AGSHRGEVVSCPRRRSLWRNLPA*GGRRPG
Trigger: ACCGGGCCGCCTGCCACCTCAAGCTGGAAGATTACG...CCAGAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCCGCGATGACTGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCGCGGCCCGGTTCCGGTaGAGAACGGCCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFAARFR*RTAWSW
Trigger: CCAGGACCAGGCCGTTCTGCACCGGAACCGGGCCGC...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTCGCAGGCGCAGTCTCTaGGGCGGGGCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCRRRSL*GGASLG
Trigger: ACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCG...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp TGGGCTCCAAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCACCCAGAGGGAGGCCTaGGGTGGCTCCAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: WAPSSHISAGQGQPGPGGTQREA*GGSSPD
Trigger: GTCTGGGCTGGAGCCACCGCAGGCCTCCCTCTGGGT...GCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTTGGAGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGTCCCCGCAGAGACCTaGAGGGAGCTCGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTVPAET*RELAAE
Trigger: CTCCGCCGCGAGCTCCCTGCAGGTCTCTGCGGGGAC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGCGGGATCAGCGCCCTaGCGCCTCCCTGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTAGSAP*RLPGQP
Trigger: TGGTTGCCCAGGGAGGCGGCAGGGCGCTGATCCCGC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CAGGACACCGTCTGGATGGCCCGTAGCTTCCCGGCCAGCCCTTGGCCCTCAAACTGGGCTGCCTTTGTCTaGCCCACGTCCGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QDTVWMARSFPASPWPSNWAAFV*PTSVPS
Trigger: GGAAGGCACGGACGTGGGGCAGACAAAGGCAGCCCA...GTTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCAGAACGGCCTGGTCCTaGGGCGTCGCGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPRTAWS*GVASRP
Trigger: GGGTCTGGACGCGACGCCCCAGGACCAGGCCGTTCT...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGGACACCGTCTGGATGGCCCGTAGCTTCCCGGCCAGCCCTTGGCCCTCAAACAGGTCAAGGACAGCCTaGTCCAGGCGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QDTVWMARSFPASPWPSNRSRTA*SRRPSF
Trigger: GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCT...GTTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 72 bp GCCATGAGCGCCTCGAAGTTCTGCAGGCCTGAGCAGTaGAGGTGCAACAGGGAGACGAGGGGCCGGACCACC +
Preference number: 4 (lower is better)
Translates to: AMSASKFCRPEQ*RCNRETRGRTT
Trigger: GGTGGTCCGGCCCCTCGTCTCCCTGTTGCACCTCAACTGCTCAGGCCTGCAGAACTTCGAGGCGCTCATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp AAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCGCGCGGGAAACTCGGTaGCTCGCAATCCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: KLTHLCRSRTAWSRRPSFARETR*LAIPSP
Trigger: GGGCGAGGGGATTGCGAGTCACCGAGTTTCCCGCGC...GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp GCTGGCAGTCATCGCGGAGAGGTTGTCTCGTGCCCGCGCAGGCGCAGTCTCTGGTCTCTTTCTAGGCCGTaGCTCAAGCCGCGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: AGSHRGEVVSCPRRRSLWSLSRP*LKPRGK
Trigger: TTTCCCGCGCGGCTTGAGTCACGGCCTAGAAAGAGA...CCAGAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCCGCGATGACTGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp TGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGGTCCCCGCAGAGACCTaGAGGGAGCTCGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: WSMTQRVRLLLGSLRDFRVPAET*RELAAE
Trigger: CTCCGCCGCGAGCTCCCTGCAGGTCTCTGCGGGGAC...CCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCGGAGAGGTTGTCTCGTaGCCGCGCAGGCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFGEVVS*PRRRSL
Trigger: GAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCC...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCGGAGAGGTTGTCTCGTaGCCGCGCAGGCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPGEVVS*PRRRSL
Trigger: GAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCC...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGCGGCCCGGTTCCGGTaGAGAACGGCCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSAARFR*RTAWSW
Trigger: CCAGGACCAGGCCGTTCTGCACCGGAACCGGGCCGC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTGCTCCAAGGCCCGGTTaGCAGCGTCACATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCAPRPG*QRHMGP
Trigger: AGGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGC...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGAGGGAGGCCTGCGGTaGCTCCAGCCCAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPREGGLR*LQPRLR
Trigger: CCGGAGTCTGGGCTGGAGCCACCGCAGGCCTCCCTC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp TGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGGAGGGAGGCCTGCGGTaGCTCCAGCCCAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: WSMTQRVRLLLGSLRDFREGGLR*LQPRLR
Trigger: CCGGAGTCTGGGCTGGAGCCACCGCAGGCCTCCCTC...CCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp TCCATCATCTCACTCTCCATCAGGGTGCTGGCAATCTCCCTCGAGGCCTCCACCCGCAGGCGCAGTCTCTaGGGCGGGGCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SIISLSIRVLAISLEASTRRRSL*GGASLG
Trigger: ACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCG...GGTGGAGGCCTCGAGGGAGATTGCCAGCACCCTGATGGAGAGTGAGATGATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCCGGTGCAGAACGGCCTaGTCCTGGGGCGTCGCGTCC +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSRCRTA*SWGVAS
Trigger: GGACGCGACGCCCCAGGACCAGGCCGTTCTGCACCG...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTTCTTCCAGCTTGAGGTaGCAGGCGGCCCGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCSSSLR*QAARFR
Trigger: CCGGAACCGGGCCGCCTGCCACCTCAAGCTGGAAGA...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGGGAGACGAGGGGCCGGACCACCTCATAGATCCGCTCGCCAGGGAAGGTCATAGGCAGGACACCGTCTaGATGGCCCGTAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: QGDEGPDHLIDPLAREGHRQDTV*MARSFP
Trigger: CGGGAAGCTACGGGCCATCCAGACGGTGTCCTGCCT...ATGACCTTCCCTGGCGAGCGGATCTATGAGGTGGTCCGGCCCCTCGTCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGCCCTGCCGCCTCCCTaGGCAACCACAGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSALPPP*ATTVPR
Trigger: CCGAGGCACTGTGGTTGCCCAGGGAGGCGGCAGGGC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR CAA 72 bp GGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGCTaGGCAAGGGCCTGGGCTGCCTTTGTCTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: GKVISGLEVMVS*ARAWAAFVCPT
Trigger: CGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCCAAGCTCACCATCACCTCCAACCCGGAGATGACCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCGCAGTTCACCAGCGCTaGGGCCACCGCAAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFAVHQR*GHRKEH
Trigger: GTGCTCTTTGCGGTGGCCTCAGCGCTGGTGAACTGC...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAAATTCAGCCCGGGTaGAGCAGGAGCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFQIQPG*SRSPLQ
Trigger: CTGCAGGGGGCTCCTGCTGCACCCGGGCTGAATTTG...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGACCCAGAGGGAGGCCTaGGGTGGCTCCAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRTQREA*GGSSPD
Trigger: GTCTGGGCTGGAGCCACCGCAGGCCTCCCTCTGGGT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp TGGGCTCCAAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCCTCCTTCCGCAGCTaGTCCACTGAGCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: WAPSSHISAGQGQPGPGGPSFRS*STELAV
Trigger: GACTGCCAGCTCAGTGGAGCAGCTGCGGAAGGAGGG...GCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTTGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GGGCACCGCTTTAATCAGGAGGGTCAGGGCATTGTCTCGGCCTTGGCCAGAGACGCTCCAAGGCCCGGTTaGCAGCGTCACATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GHRFNQEGQGIVSALARDAPRPG*QRHMGP
Trigger: AGGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGC...GTCTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCCTGATTAAAGCGGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCTGCCCAGCGCCGAGTaGCTGCGTCGATCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFLPSAE*LRRSGH
Trigger: ATGACCAGATCGACGCAGGCACTCGGCGCTGGGCAG...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCTGGCAGTCATCGCGGAGAGGTTGTCTCGTGCCCGCGCAGGCGCAGTCTCTGGTGGAGAGCAGCTCTCTaGAGGAACTGGTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: AGSHRGEVVSCPRRRSLWWRAAL*RNWSAQ
Trigger: CTGTGCTGACCAGTTCCTGCAGAGAGCTGCTCTCCA...CCAGAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCCGCGATGACTGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCGGGATCAGCGCCCTaGCGCCTCCCTGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLAGSAP*RLPGQP
Trigger: TGGTTGCCCAGGGAGGCGGCAGGGCGCTGATCCCGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCACTTGGGGAATGCGGCTaGAGAGCGTGGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPLGECG*RAWAAW
Trigger: CCATGCGGCCCACGCTCTGCAGCCGCATTCCCCAAG...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCTGGTCACTTGGGGAATaGGGCTGCAGAGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPWSLGE*GCRAWA
Trigger: GGCCCACGCTCTGCAGCCGCATTCCCCAAGTGACCA...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TGGGCTCCAAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCTGGTCACTTGGGGAATaGGGCTGCAGAGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: WAPSSHISAGQGQPGPGGWSLGE*GCRAWA
Trigger: GGCCCACGCTCTGCAGCCGCATTCCCCAAGTGACCA...GCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTTGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCTTCACCATGCACACCATGGCCGACACCACACCCGCTGCCAGCAGCTTCACAGCACCCCGGTGCTaGAGCTCCTGGTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SVFTMHTMADTTPAASSFTAPRC*SSWLEL
Trigger: GAGCTCCAACCAGGAGCTGCAGCACCGGGGTGCTGT...GAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCACCACAGCACCCCGGTaGTGCAGCTCCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFTTAPR*CSSWLE
Trigger: CTCCAACCAGGAGCTGCAGCACCGGGGTGCTGTGGT...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTCGGGGCGCTTGGCTCTaGATCGCAGGTGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTRGAWL*IAGAGK
Trigger: CTTGCCTGCACCTGCGATCCAGAGCCAAGCGCCCCG...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGAGAACGGCCTGGTCCTaGGGCGTCGCGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRRTAWS*GVASRP
Trigger: GGGTCTGGACGCGACGCCCCAGGACCAGGCCGTTCT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCGGTGCAGAACGGCCTaGTCCTGGGGCGTCGCGTCC +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLRCRTA*SWGVAS
Trigger: GGACGCGACGCCCCAGGACCAGGCCGTTCTGCACCG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCATCTTCCAGCTTGAGGTaGCAGGCGGCCCGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPSSSLR*QAARFR
Trigger: CCGGAACCGGGCCGCCTGCCACCTCAAGCTGGAAGA...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GCCCGCGCAGGCGCAGTCTCTGGGGCGGGGCGAGTCTGGGTTCGGGACGCCACCCCTTTTCAATGGCTTTaGATGCCTCTGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ARAGAVSGAGRVWVRDATPFQWL*MPLFLL
Trigger: AAGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGG...GGTGGCGTCCCGAACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTAGGTCAAGGACAGCCTaGTCCAGGCGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCRSRTA*SRRPSF
Trigger: GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCT...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTGCCAGGGACACAGCCTaGCTTTCCACGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCARDTA*LSTPRM
Trigger: CATCCTGGGCGTGGAAAGCCAGGCTGTGTCCCTGGC...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCGCCAGGGACACAGCCTaGCTTTCCACGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPARDTA*LSTPRM
Trigger: CATCCTGGGCGTGGAAAGCCAGGCTGTGTCCCTGGC...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCAGGACACCGTCTGGATaGCCCGTAGCTTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPRTPSG*PVASRP
Trigger: TGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCT...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCAGGACACCGTCTGGATaGCCCGTAGCTTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFRTPSG*PVASRP
Trigger: TGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCT...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTAGGCAGGACACCGTCTaGATGGCCCGTAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCRQDTV*MARSFP
Trigger: CGGGAAGCTACGGGCCATCCAGACGGTGTCCTGCCT...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTGTTGCCAGCGTCACATaGGCCCTGCAGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCVASVT*ALQEAG
Trigger: TCCTGCCTCCTGCAGGGCCCATGTGACGCTGGCAAC...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGCCTTGCCGGCTGCATaGATCAGAGCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTALPAA*IRASTA
Trigger: GGCCGTGGAGGCTCTGATCCATGCAGCCGGCAAGGC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGCCCTGCCGCCTCCCTaGGCAACCACAGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLALPPP*ATTVPR
Trigger: CCGAGGCACTGTGGTTGCCCAGGGAGGCGGCAGGGC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CCGGTGCTGCAGCTCCTGGTTGGAGCTCAGAAGCAGGGCCTGCAGGATCTCCAGGCTGCAGCTCCTGGTTaGAGCTCAGAAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PVLQLLVGAQKQGLQDLQAAAPG*SSEAGP
Trigger: AGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGC...CTGGAGATCCTGCAGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGCACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGCCGCAGCTGCTCCACTaGGCTGGCAGTCATCGCGGA +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRPQLLH*AGSHRG
Trigger: TCCGCGATGACTGCCAGCTCAGTGGAGCAGCTGCGG...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp TGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGCCGCAGCTGCTCCACTaGGCTGGCAGTCATCGCGGA +
Preference number: 4 (lower is better)
Translates to: WSMTQRVRLLLGSLRDFRPQLLH*AGSHRG
Trigger: TCCGCGATGACTGCCAGCTCAGTGGAGCAGCTGCGG...CCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTGCAGAGCCGCCAGCATaGGGTCAGTCTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCAEPPA*GQSLPC
Trigger: ACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGC...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCGCCGGAGCCTCTCGCTaGTCCCAGCCAGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFAGASR*SQPGLL
Trigger: TAACAAACCTGGCTGGGATCAGCGAGAGGCTCCGGC...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCGCTCTGGATCGCAGGTaGAGGCAAGCTCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPALDRR*RQAPGA
Trigger: TGCGCCCGGAGCTTGCCTGCACCTGCGATCCAGAGC...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCGGCCCGGTTCCGGTaGAGAACGGCCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADAARFR*RTAWSW
Trigger: CCAGGACCAGGCCGTTCTGCACCGGAACCGGGCCGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGCTCATGCGGCTGTTTaGGGTCACTGCGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTAHAAV*GHCELP
Trigger: GGGGAGCTCGCAGTGACCGCAAACAGCCGCATGAGC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGCGCCCGGATGCGGATaGTGTCCTTCTCGCTGCACT +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTAPGCG*CPSRCT
Trigger: AGTGCAGCGAGAAGGACAGCATCCGCATCCGGGCGC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCTTCACCATGCACACCATGGCCGACACCACACCCGCTGCCAGCAGCTTCCCAGCGCCGAGTGCCTaGGTCGATCTGGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: SVFTMHTMADTTPAASSFPAPSA*VDLVIA
Trigger: TGCAATGACCAGATCGACGCAGGCACTCGGCGCTGG...GAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCCTGCCCAGCGCCGAGTaGCTGCGTCGATCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSLPSAE*LRRSGH
Trigger: ATGACCAGATCGACGCAGGCACTCGGCGCTGGGCAG...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTCGACACCACACCCGCTaGCAGCAGCTTCTTCACCCG +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTRHHTR*QQLLHP
Trigger: CGGGTGAAGAAGCTGCTGGCAGCGGGTGTGGTGTCG...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCACGACACCACACCCGCTaGCAGCAGCTTCTTCACCCG +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPRHHTR*QQLLHP
Trigger: CGGGTGAAGAAGCTGCTGGCAGCGGGTGTGGTGTCG...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGGCAAGGGCCTGGGCTaGCTTTGTCTGCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRGKGLG*LCLPHV
Trigger: GACGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCCTGAGCAGTTGAGGTaGAACAGGGAGACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFPEQLR*NRETRG
Trigger: GCCCCTCGTCTCCCTGTTGCACCTCAACTGCTCAGG...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCTGGCCAAGTTACACATaGACTCCGTGGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFWPSYT*TPWLPG
Trigger: GCCGGGCAGCCACGGAGTGCATGTGTAACTTGGCCA...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCCTTGGGGAATGCGGCTaGAGAGCGTGGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPLGECG*RAWAAW
Trigger: CCATGCGGCCCACGCTCTGCAGCCGCATTCCCCAAG...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCAGGGGCGGGGCGCTTaGCTCTGGATCGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLQGRGA*LWIAGA
Trigger: TGCACCTGCGATCCAGAGCCAAGCGCCCCGCCCCTG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGCTCTTGCGTCGGAGGTaGGGTCAGAGAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LIDPLAREGHLRVGGDGELLRRR*GQRGAG
Trigger: CCCTGCCCCTCTCTGACCCCACCTCCGACGCAAGAG...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGAGAACGGCCTGGTCCTaGGGCGTCGCGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLRTAWS*GVASRP
Trigger: GGGTCTGGACGCGACGCCCCAGGACCAGGCCGTTCT...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTGCATTGTCTCGGCCTTaGCCAGAGACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCALSRP*PETPTS
Trigger: AGAGGTGGGGGTCTCTGGCCAAGGCCGAGACAATGC...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGCCTTGCCGGCTGCATaGATCAGAGCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRALPAA*IRASTA
Trigger: GGCCGTGGAGGCTCTGATCCATGCAGCCGGCAAGGC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGCTTGCTGAGGAGAATAGAGGCGCTCATGCGGCTGTTTGCGGTCACTGCGAGGCCTTGCCGGCTGCATaGATCAGAGCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ELAEENRGAHAAVCGHCEALPAA*IRASTA
Trigger: GGCCGTGGAGGCTCTGATCCATGCAGCCGGCAAGGC...CTCGCAGTGACCGCAAACAGCCGCATGAGCGCCTCTATTCTCCTCAGCAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CGCTCATGCGGCTGTTTGCGGTCACTGCGAGCTCCCCAGGAGGGTCCTGTAGAGAGCTTGGCTTGTCCTTaGGGTGCTGCTCGGGCACAT +
Preference number: 4 (lower is better)
Translates to: RSCGCLRSLRAPQEGPVESLACP*GAARAH
Trigger: ATGTGCCCGAGCAGCACCCCAAGGACAAGCCAAGCT...CTCTACAGGACCCTCCTGGGGAGCTCGCAGTGACCGCAAACAGCCGCATGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCAGCCCGCACGAAGCTTaGCTTGTCCTTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFSPHEA*LVLGVL
Trigger: CAGCACCCCAAGGACAAGCCAAGCTTCGTGCGGGCT...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCTCACCATGCACACCATaGCCGACACCACACCCGCTG +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPSPCTP*PTPHPL
Trigger: CAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGA...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCCGTGTGCATGAGCCTTaGGCCCAGGGACAACCCCCT +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSRVHEP*AQGQPP
Trigger: AGGGGGTTGTCCCTGGGCCCAAGGCTCATGCACACG...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCACGTGTGCATGAGCCTTaGGCCCAGGGACAACCCCCT +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPRVHEP*AQGQPP
Trigger: AGGGGGTTGTCCCTGGGCCCAAGGCTCATGCACACG...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCACAAGGGTCACCCAGCTaGAGAGCAGCAGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPQGSPS*RAAVAP
Trigger: TGGGGCTACTGCTGCTCTTCAGCTGGGTGACCCTTG...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp AAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCGCCGGAGCCTCTCGCTaGTCCCAGCCAGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: KLTHLCRSRTAWSRRPSFAGASR*SQPGLL
Trigger: TAACAAACCTGGCTGGGATCAGCGAGAGGCTCCGGC...GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGCAGGGCTGTGTGACTaGACGTGGCCGCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSAGLCD*TWPLTQ
Trigger: CTGAGTCAGCGGCCACGTTCAGTCACACAGCCCTGC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCCCAAGCAGGGCTGTGTaGCTGAACGTGGCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSPSRAV*LNVAAD
Trigger: GTCAGCGGCCACGTTCAGTCACACAGCCCTGCTTGG...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGCTCTGGATCGCAGGTaGAGGCAAGCTCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLALDRR*RQAPGA
Trigger: TGCGCCCGGAGCTTGCCTGCACCTGCGATCCAGAGC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGACGCCACCGGCAGCTaGCCCGCCCCACTCTTGCGT +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVDATGS*PAPLLR
Trigger: ACGCAAGAGTGGGGCGGGGCAGCTGCCGGTGGCGTC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp TTGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGGAGAGGTTGTCTCGTaGCCGCGCAGGCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LVDDPEGEAVVGVLERLPGEVVS*PRRRSL
Trigger: GAGACTGCGCCTGCGCGGGCACGAGACAACCTCTCC...CGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGCCCTCCTTCCGCAGCTaGTCCACTGAGCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRPSFRS*STELAV
Trigger: GACTGCCAGCTCAGTGGAGCAGCTGCGGAAGGAGGG...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCGCTCATGCGGCTGTTTaGGGTCACTGCGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPAHAAV*GHCELP
Trigger: GGGGAGCTCGCAGTGACCGCAAACAGCCGCATGAGC...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCTCCAAGGCCCGGTTaGCAGCGTCACATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLAPRPG*QRHMGP
Trigger: AGGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCTTAGCCTTGCCGGCTaGATGGATCAGAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFLSLAG*MDQSLH
Trigger: GTGGAGGCTCTGATCCATGCAGCCGGCAAGGCTAAG...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTCCTGGGCAACCACAGTaGCTCGGTCCTCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCPGQPQ*LGPLPL
Trigger: AAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGG...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTGGCAAGGGCCTGGGCTaGCTTTGTCTGCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVGKGLG*LCLPHV
Trigger: GACGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCC...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp ATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCATGTCCCCTGAGCAGTTGAGGTaGAACAGGGAGACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: MPTSVRRAASMRSVSPMSPEQLR*NRETRG
Trigger: GCCCCTCGTCTCCCTGTTGCACCTCAACTGCTCAGG...GGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCTTGGGGAATGCGGCTaGAGAGCGTGGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLLGECG*RAWAAW
Trigger: CCATGCGGCCCACGCTCTGCAGCCGCATTCCCCAAG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGACCACAGCACCCCGGTaGTGCAGCTCCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRTTAPR*CSSWLE
Trigger: CTCCAACCAGGAGCTGCAGCACCGGGGTGCTGTGGT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTCAGGCTGTGTTGGGATaGACCTTCCCCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCQAVLG*TFPIPS
Trigger: GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTG...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGGGAGACGAGGGGCCGGACCACCTCATAGATCCGCTCGCCAGGGAAGGTCATCTACCACCTCTGTCCTaGTCCTGGGAACCCCAACAT +
Preference number: 4 (lower is better)
Translates to: QGDEGPDHLIDPLAREGHLPPLS*SWEPQH
Trigger: ATGTTGGGGTTCCCAGGACCAGGACAGAGGTGGTAG...ATGACCTTCCCTGGCGAGCGGATCTATGAGGTGGTCCGGCCCCTCGTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCAGGGGCGGGGCGCTTaGCTCTGGATCGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSQGRGA*LWIAGA
Trigger: TGCACCTGCGATCCAGAGCCAAGCGCCCCGCCCCTG...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCCTGGGCAACCACAGTGCCTCGGTCCTCTACCTCTTCCACTAAAGCCAAGATCTTCCAGCTTGAGGTaGCAGGCGGCCCGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LPGQPQCLGPLPLPLKPRSSSLR*QAARFR
Trigger: CCGGAACCGGGCCGCCTGCCACCTCAAGCTGGAAGA...TCTTGGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGAGGTCAAGGACAGCCTaGTCCAGGCGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRRSRTA*SRRPSF
Trigger: GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGCATTGTCTCGGCCTTaGCCAGAGACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTALSRP*PETPTS
Trigger: AGAGGTGGGGGTCTCTGGCCAAGGCCGAGACAATGC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAGCATTGTCTCGGCCTTaGCCAGAGACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPALSRP*PETPTS
Trigger: AGAGGTGGGGGTCTCTGGCCAAGGCCGAGACAATGC...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCATTCCCGGCCAGCCCTTaGCCCTCAAACCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPFPASP*PSNQLL
Trigger: CAAGAGCTGGTTTGAGGGCCAAGGGCTGGCCGGGAA...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCAGGACACCGTCTGGATaGCCCGTAGCTTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSRTPSG*PVASRP
Trigger: TGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCT...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGAGGCAGGACACCGTCTaGATGGCCCGTAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRRQDTV*MARSFP
Trigger: CGGGAAGCTACGGGCCATCCAGACGGTGTCCTGCCT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGCCCTGCCGCCTCCCTaGGCAACCACAGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVALPPP*ATTVPR
Trigger: CCGAGGCACTGTGGTTGCCCAGGGAGGCGGCAGGGC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTTACACATGCACTCCGTaGCTGCCCGGCGGATCATCT +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCYTCTP*LPGGSS
Trigger: AGATGATCCGCCGGGCAGCCACGGAGTGCATGTGTA...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCTCTAGGGCAGTGTGTGGTCACTTaGGGAATGCGGCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HISAGQGQPGPGGPASLGQCVVT*GMRLQS
Trigger: GCTCTGCAGCCGCATTCCCCAAGTGACCACACACTG...CCCTAGAGAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTCGGTGCTGCAGCTCCTaGTTGGAGCTCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTRCCSS*LELRSR
Trigger: CCTGCTTCTGAGCTCCAACCAGGAGCTGCAGCACCG...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCTCTCCATCAGGGTGCTaGCAATCTCCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPSPSGC*QSPSRP
Trigger: AGGCCTCGAGGGAGATTGCCAGCACCCTGATGGAGA...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGCGTGTGCATGAGCCTTaGGCCCAGGGACAACCCCCT +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRRVHEP*AQGQPP
Trigger: AGGGGGTTGTCCCTGGGCCCAAGGCTCATGCACACG...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGCGCGGGAAACTCGGTaGCTCGCAATCCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVARETR*LAIPSP
Trigger: GGGCGAGGGGATTGCGAGTCACCGAGTTTCCCGCGC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGCAAGGGTCACCCAGCTaGAGAGCAGCAGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LIDPLAREGHLRVGGDGEQGSPS*RAAVAP
Trigger: TGGGGCTACTGCTGCTCTTCAGCTGGGTGACCCTTG...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCGTAATCTTCCAGCTTaGGGTGGCAGGCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLRNLPA*GGRRPG
Trigger: ACCGGGCCGCCTGCCACCTCAAGCTGGAAGATTACG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGCAGAGCCGCCAGCATaGGGTCAGTCTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSAEPPA*GQSLPC
Trigger: ACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCGGGCAGGATCCACAATaGTGGCACCTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFGQDPQ*WHLLCL
Trigger: GAGGCAAAGAAGGTGCCATCATTGTGGATCCTGCCC...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCGGGCAGGATCCACAATaGTGGCACCTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPGQDPQ*WHLLCL
Trigger: GAGGCAAAGAAGGTGCCATCATTGTGGATCCTGCCC...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCAGTTCACCAGCGCTaGGGCCACCGCAAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLAVHQR*GHRKEH
Trigger: GTGCTCTTTGCGGTGGCCTCAGCGCTGGTGAACTGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTGAAGTTCTGCAGGCCTaGGCAGTTGAGGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCEVLQA*AVEVQQ
Trigger: CTGTTGCACCTCAACTGCTCAGGCCTGCAGAACTTC...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CTCCCTGGGCAACCACAGTGCCTCGGTCCTCTACCTCTTCCACTAAAGCCAAGAGCAGGGCTGTGTGACTaGACGTGGCCGCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: LPGQPQCLGPLPLPLKPRAGLCD*TWPLTQ
Trigger: CTGAGTCAGCGGCCACGTTCAGTCACACAGCCCTGC...TCTTGGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCCAAGCAGGGCTGTGTaGCTGAACGTGGCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLPSRAV*LNVAAD
Trigger: GTCAGCGGCCACGTTCAGTCACACAGCCCTGCTTGG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAGCTCCGCCGGTAGAGTaGTTTGACATCCCCACCATC +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPAPPVE*FDIPTI
Trigger: GATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGC...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCTGTTTGCGGTCACTaGGAGCTCCCCAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLAVCGH*ELPRRV
Trigger: GACCCTCCTGGGGAGCTCGCAGTGACCGCAAACAGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTTGGCATACTTGGCCAGCTCCACCATCTTGGGGTCGGGCTCCTCGTAGTCATAGCTGTTTGCGGTCACTaGGAGCTCCCCAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LGILGQLHHLGVGLLVVIAVCGH*ELPRRV
Trigger: GACCCTCCTGGGGAGCTCGCAGTGACCGCAAACAGC...TATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCCACTAGCGCCCGGATaGGGATGCTGTCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLPLAPG*GCCPSR
Trigger: GCGAGAAGGACAGCATCCGCATCCGGGCGCTAGTGG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCCACTAGCGCCCGGATaGGGATGCTGTCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLPLAPG*GCCPSR
Trigger: GCGAGAAGGACAGCATCCGCATCCGGGCGCTAGTGG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCCCAGCGCCGAGTGCCTaGGTCGATCTGGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSPAPSA*VDLVIA
Trigger: TGCAATGACCAGATCGACGCAGGCACTCGGCGCTGG...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCTGCCCAGCGCCGAGTaGCTGCGTCGATCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLLPSAE*LRRSGH
Trigger: ATGACCAGATCGACGCAGGCACTCGGCGCTGGGCAG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTCGACACCACACCCGCTaGCAGCAGCTTCTTCACCCG +
Preference number: 4 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVRHHTR*QQLLHP
Trigger: CGGGTGAAGAAGCTGCTGGCAGCGGGTGTGGTGTCG...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCTCTAGGGTCTCCGTCTTCACCATaGACACCATGGCCGACACCA +
Preference number: 4 (lower is better)
Translates to: HISAGQGQPGPGGPASLGSPSSP*TPWPTP
Trigger: TGGTGTCGGCCATGGTGTGCATGGTGAAGACGGAGA...CCCTAGAGAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTTGGAGAGCAGCTCTCTaGAGGAACTGGTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCWRAAL*RNWSAQ
Trigger: CTGTGCTGACCAGTTCCTGCAGAGAGCTGCTCTCCA...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGTGGGCTGCCTTTGTCTaGCCCACGTCCGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLWAAFV*PTSVPS
Trigger: GGAAGGCACGGACGTGGGGCAGACAAAGGCAGCCCA...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGGCAAGGGCCTGGGCTaGCTTTGTCTGCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSGKGLG*LCLPHV
Trigger: GACGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGCATGCACTCCGTGGCTaGCCGGCGGATCATCTCATG +
Preference number: 4 (lower is better)
Translates to: LIDPLAREGHLRVGGDGEHALRG*PADHLM
Trigger: CATGAGATGATCCGCCGGGCAGCCACGGAGTGCATG...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGGCCAAGTTACACATaGACTCCGTGGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSWPSYT*TPWLPG
Trigger: GCCGGGCAGCCACGGAGTGCATGTGTAACTTGGCCA...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGACAGCACCCCGGTGCTaGAGCTCCTGGTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLTAPRC*SSWLEL
Trigger: GAGCTCCAACCAGGAGCTGCAGCACCGGGGTGCTGT...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCACAGCACCCCGGTGCTaGAGCTCCTGGTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLTAPRC*SSWLEL
Trigger: GAGCTCCAACCAGGAGCTGCAGCACCGGGGTGCTGT...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGACCACAGCACCCCGGTaGTGCAGCTCCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLTTAPR*CSSWLE
Trigger: CTCCAACCAGGAGCTGCAGCACCGGGGTGCTGTGGT...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCACACTCTCCATCAGGGTaGTGGCAATCTCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPHSPSG*WQSPSR
Trigger: CCTCGAGGGAGATTGCCAGCACCCTGATGGAGAGTG...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCTCTAGGGACAATAGGTAGCGTGTaGATGAGCCTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HISAGQGQPGPGGPASLGTIGSV*MSLGPR
Trigger: CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGT...CCCTAGAGAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCACCACCAGCCAAAGCTaGTTCCGTCCTTACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPTTSQS*FRPYSP
Trigger: CGGAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGT...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGCCCTCCTTCCGCAGCTaGTCCACTGAGCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVPSFRS*STELAP
Trigger: CGGGGCCAGCTCAGTGGAGCAGCTGCGGAAGGAGGG...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418476.2
CDS-3UTR CCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCCTCTGTCCTGGTCCTaGGAACCCCAACATCTCTCT +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFPLSWS*EPQHLS
Trigger: AGAGAGATGTTGGGGTTCCCAGGACCAGGACAGAGG...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCCTACCACCTCTGTCCTaGTCCTGGGAACCCCAACAT +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPLPPLS*SWEPQH
Trigger: ATGTTGGGGTTCCCAGGACCAGGACAGAGGTGGTAG...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGAGAGAGAGGTTGGCTaGACAAGGGTCACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSEREVG*TRVTQL
Trigger: CAGCTGGGTGACCCTTGTCCAGCCAACCTCTCTCTC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp AAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCCATGGACATCCCGGGTaGTCTGGCACAAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KLTHLCRSRTAWSRRPSFHGHPG*SGTSEG
Trigger: ACCCTCACTTGTGCCAGACCACCCGGGATGTCCATG...GAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCTTTCCACGCCCAGGATaGAGACTACTCGCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPFPRPG*RLLAEF
Trigger: GAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAA...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGTTGCCAGCGTCACATaGGCCCTGCAGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLVASVT*ALQEAG
Trigger: TCCTGCCTCCTGCAGGGCCCATGTGACGCTGGCAAC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGCCAGCTCCACCATCTTaGGGTCGGGCTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRPAPPS*GRAPRS
Trigger: ACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGG...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCAGCTTGGCTTGTCCTTaGGGTGCTGCTCGGGCACAT +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSSLACP*GAARAH
Trigger: ATGTGCCCGAGCAGCACCCCAAGGACAAGCCAAGCT...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGCTCTCTGCAGGAACTaGTCAGCACAGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSALCRN*SAQGSP
Trigger: CGGAGAGCCCTGTGCTGACCAGTTCCTGCAGAGAGC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCAAGCCAAGAAGACCCTaGAGAGCAGCTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPKPRRP*RAALCR
Trigger: CCTGCAGAGAGCTGCTCTCCAGGGTCTTCTTGGCTT...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCAGTCGGTCATTGCCCTaGGCTTCGAAGAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSSRSLP*ASKRSC
Trigger: GCAGGACCTCTTCGAAGCCCAGGGCAATGACCGACT...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCGCTGCAGCTCCTGGTTaGAGCTCAGAAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPAAAPG*SSEAGP
Trigger: AGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGC...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGCGGTGCTGCAGCTCCTaGTTGGAGCTCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LIDPLAREGHLRVGGDGERCCSS*LELRSR
Trigger: CCTGCTTCTGAGCTCCAACCAGGAGCTGCAGCACCG...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTCTCCATCAGGGTGCTaGCAATCTCCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSSPSGC*QSPSRP
Trigger: AGGCCTCGAGGGAGATTGCCAGCACCCTGATGGAGA...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTGATGGGCAAGAGTATTaGGCATGCCAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCDGQEY*ACQPPP
Trigger: TGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATC...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGTGGTCTGGCACAAGTaGGGGTGGTGGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLVVWHK*GWWTRA
Trigger: AGCTCTGGTCCACCACCCTCACTTGTGCCAGACCAC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATCGTAATCTTCCAGCTTaGGGTGGCAGGCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADRNLPA*GGRRPG
Trigger: ACCGGGCCGCCTGCCACCTCAAGCTGGAAGATTACG...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCGCCGGTAGAGTGCTTTaGCATCCCCACCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPAGRVL*HPHHPF
Trigger: AAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGC...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTATCGCACCTTCTCCTaGATCTGGCCCCCGATGTTC +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSYRTFS*IWPPMF
Trigger: GAACATCGGGGGCCAGATTCAGGAGAAGGTGCGATA...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGCAGAGCCGCCAGCATaGGGTCAGTCTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLAEPPA*GQSLPC
Trigger: ACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GAGCAAATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCGCCACTGTCCGTGACTaGTGCTCAGAGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: EQMPTSVRRAASMRSVSPATVRD*CSEQMP
Trigger: TGGCATTTGCTCTGAGCATCAGTCACGGACAGTGGC...GGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCATTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCCAAACTGCTTCATGCTaGAGTCAGTCCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSQTASC*SQSLQP
Trigger: CGGCTGGAGGGACTGACTTCAGCATGAAGCAGTTTG...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCAGTTCACCAGCGCTaGGGCCACCGCAAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADAVHQR*GHRKEH
Trigger: GTGCTCTTTGCGGTGGCCTCAGCGCTGGTGAACTGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAGGTTTGTTAGGGCCATaGGCGCCTCGAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPGLLGP*APRSSA
Trigger: TGCAGAACTTCGAGGCGCTCATGGCCCTAACAAACC...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCAGGGCTGTGTGACTaGACGTGGCCGCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADAGLCD*TWPLTQ
Trigger: CTGAGTCAGCGGCCACGTTCAGTCACACAGCCCTGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGAAAAAGGGCCCCTCTaGGTGAGGCTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLEKGPL*VRLQAV
Trigger: CACTGCCTGCAGCCTCACTCAGAGGGGCCCTTTTTC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGAAAAAGGGCCCCTCTaGGTGAGGCTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLEKGPL*VRLQAV
Trigger: CACTGCCTGCAGCCTCACTCAGAGGGGCCCTTTTTC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTCTCGCCCTTCCGCATTaGGGGTTACTTCGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCLALPH*GLLRLL
Trigger: TAACAACCGAAGTAACCCGCAATGCGGAAGGGCGAG...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATCAAATTCAGCCCGGGTaGAGCAGGAGCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADQIQPG*SRSPLQ
Trigger: CTGCAGGGGGCTCCTGCTGCACCCGGGCTGAATTTG...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCAAGCTCACACATCTCTaGAGGTCAAGGACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFKLTHL*RSRTAW
Trigger: CCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCGATGCTCAGAGCAAATaGCAACCAGCGTACGCAGAG +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPDAQSK*QPAYAE
Trigger: CTCTGCGTACGCTGGTTGGCATTTGCTCTGAGCATC...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGCCGAGTTCCCAGTATaGTCAGGGTTGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSAEFPV*SGLPLS
Trigger: GGACAGTGGCAACCCTGAGCATACTGGGAACTCGGC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCTGTTTGCGGTCACTaGGAGCTCCCCAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADAVCGH*ELPRRV
Trigger: GACCCTCCTGGGGAGCTCGCAGTGACCGCAAACAGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCTCATGCGGCTGTTTaGGGTCACTGCGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADAHAAV*GHCELP
Trigger: GGGGAGCTCGCAGTGACCGCAAACAGCCGCATGAGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCCTTAGCCTTGCCGGCTaGATGGATCAGAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPLSLAG*MDQSLH
Trigger: GTGGAGGCTCTGATCCATGCAGCCGGCAAGGCTAAG...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGCGCCCGGATGCGGATaGTGTCCTTCTCGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSAPGCG*CPSRCT
Trigger: AGTGCAGCGAGAAGGACAGCATCCGCATCCGGGCGC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATCCACTAGCGCCCGGATaGGGATGCTGTCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADPLAPG*GCCPSR
Trigger: GCGAGAAGGACAGCATCCGCATCCGGGCGCTAGTGG...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCCAGCGCCGAGTGCCTaGGTCGATCTGGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLPAPSA*VDLVIA
Trigger: TGCAATGACCAGATCGACGCAGGCACTCGGCGCTGG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCTGCTGCTCGGGCACATaGTGCTTGGCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPCCSGT*CLAYLA
Trigger: GGCCAAGTATGCCAAGCAGCATGTGCCCGAGCAGCA...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGTGCTGCTCGGGCACATaGTGCTTGGCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRCCSGT*CLAYLA
Trigger: GGCCAAGTATGCCAAGCAGCATGTGCCCGAGCAGCA...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCCCTGGGCAACCACAGTaGCTCGGTCCTCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPPGQPQ*LGPLPL
Trigger: AAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGG...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGCTTCAGTCGGTCATTaGCCTGGGCTTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSASVGH*PGLRRG
Trigger: ACCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTTGGTCACTTGGGGAATaGGGCTGCAGAGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSWSLGE*GCRAWA
Trigger: GGCCCACGCTCTGCAGCCGCATTCCCCAAGTGACCA...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCACAATAGGTAGCGTGTaGATGAGCCTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSTIGSV*MSLGPR
Trigger: CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGT...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGCCTGGCTTTCCACGCCCAGGATGGAGACTACTCGCCGAGTTCCCAGTATGCTCAGGCTGTGTTGGGATaGACCTTCCCCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLAFHAQDGDYSPSSQYAQAVLG*TFPIPS
Trigger: GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTG...AGCATACTGGGAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAAGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGGGCCTGACCTTCTCTaGATGCCCATGAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSGPDLL*MPMRVH
Trigger: GTGAACTCTCATGGGCATCCAGAGAAGGTCAGGCCC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCGCAGTAGGCTTCCTCTaGAGAATCAGACAGACGAGG +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFAVGFL*RIRQTR
Trigger: CCTCGTCTGTCTGATTCTCCAGAGGAAGCCTACTGC...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGCTCTTGCGTCGGAGGTaGGGTCAGAGAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVLLRRR*GQRGAG
Trigger: CCCTGCCCCTCTCTGACCCCACCTCCGACGCAAGAG...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTCGGTGCAGAACGGCCTaGTCCTGGGGCGTCGCGTCC +
Preference number: 4 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFRCRTA*SWGVAS
Trigger: GGACGCGACGCCCCAGGACCAGGCCGTTCTGCACCG...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCCAGGGACACAGCCTaGCTTTCCACGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADARDTA*LSTPRM
Trigger: CATCCTGGGCGTGGAAAGCCAGGCTGTGTCCCTGGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCGTGCCTGCGTCGATCTaGTCATTGCACAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFVPASI*SLHSHF
Trigger: AAAGTGGCTGTGCAATGACCAGATCGACGCAGGCAC...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCCAGCTCCACCATCTTaGGGTCGGGCTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLPAPPS*GRAPRS
Trigger: ACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp ATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCATGTCCGCTGCTTGGCATACTTaGCCAGCTCCACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: MPTSVRRAASMRSVSPMSAAWHT*PAPPSW
Trigger: CCAAGATGGTGGAGCTGGCCAAGTATGCCAAGCAGC...GGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGCTTGGCTTGTCCTTaGGGTGCTGCTCGGGCACAT +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPSLACP*GAARAH
Trigger: ATGTGCCCGAGCAGCACCCCAAGGACAAGCCAAGCT...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCAGCCCGCACGAAGCTTaGCTTGTCCTTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLSPHEA*LVLGVL
Trigger: CAGCACCCCAAGGACAAGCCAAGCTTCGTGCGGGCT...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCTCTCTGCAGGAACTaGTCAGCACAGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLALCRN*SAQGSP
Trigger: CGGAGAGCCCTGTGCTGACCAGTTCCTGCAGAGAGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGGACACCGTCTGGATGGCCCGTAGCTTCCCGGCCAGCCCTTGGCCCTCAAACTGTAGCCTTCTATCATaGGCACAGCCTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QDTVWMARSFPASPWPSNCSLLS*AQPSPS
Trigger: TGAAGGAGAAGGCTGTGCCCATGATAGAAGGCTACA...GTTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGCTGCAGCTCCTGGTTaGAGCTCAGAAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLAAAPG*SSEAGP
Trigger: AGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCGGTGCTGCAGCTCCTaGTTGGAGCTCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLRCCSS*LELRSR
Trigger: CCTGCTTCTGAGCTCCAACCAGGAGCTGCAGCACCG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCCTTGTGACAGGGCTGTaGTCACCCTTAGCTAGCACT +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPLVTGL*SPLAST
Trigger: AGTGCTAGCTAAGGGTGACCACAGCCCTGTCACAAG...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGGCAGCAAGCGAGGATaGGCAAGAGTATTGGGCATG +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSGSKRG*ARVLGM
Trigger: CATGCCCAATACTCTTGCCCATCCTCGCTTGCTGCC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GGGCACCGCTTTAATCAGGAGGGTCAGGGCATTGTCTCGGCCTTGGCCAGAGACGGCAGCAAGCGAGGATaGGCAAGAGTATTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GHRFNQEGQGIVSALARDGSKRG*ARVLGM
Trigger: CATGCCCAATACTCTTGCCCATCCTCGCTTGCTGCC...GTCTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCCTGATTAAAGCGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGGGCTCGGGGGTCCCTaGACCACTCACAGTCATCGC +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVGLGGP*TTHSHR
Trigger: GCGATGACTGTGAGTGGTCCAGGGACCCCCGAGCCC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418476.2
CDS-3UTR TCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGTGGTCTGGCACAAGTaGGGGTGGTGGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSVVWHK*GWWTRA
Trigger: AGCTCTGGTCCACCACCCTCACTTGTGCCAGACCAC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCCGTAGTCTCCACATTTaGACAGCTCATTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPRSLHI*TAHCPP
Trigger: AGGAGGGCAATGAGCTGTTCAAATGTGGAGACTACG...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAGCCGGTAGAGTGCTTTaGCATCCCCACCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPAGRVL*HPHHPF
Trigger: AAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGC...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGTATCGCACCTTCTCCTaGATCTGGCCCCCGATGTTC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRYRTFS*IWPPMF
Trigger: GAACATCGGGGGCCAGATTCAGGAGAAGGTGCGATA...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp TGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGTATCGCACCTTCTCCTaGATCTGGCCCCCGATGTTC +
Preference number: 4 (lower is better)
Translates to: WSMTQRVRLLLGSLRDFRYRTFS*IWPPMF
Trigger: GAACATCGGGGGCCAGATTCAGGAGAAGGTGCGATA...CCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGCCACTGTCCGTGACTaGTGCTCAGAGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRATVRD*CSEQMP
Trigger: TGGCATTTGCTCTGAGCATCAGTCACGGACAGTGGC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGGTTGCCACTGTCCGTaGCTGATGCTCAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSGCHCP*LMLRAN
Trigger: ATTTGCTCTGAGCATCAGTCACGGACAGTGGCAACC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGGTTGCCACTGTCCGTaGCTGATGCTCAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTGCHCP*LMLRAN
Trigger: ATTTGCTCTGAGCATCAGTCACGGACAGTGGCAACC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCTCTCCGCATCACACTTaGGGTCATCAAAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPSPHHT*GHQRAC
Trigger: GCAAGCTCTTTGATGACCTCAAGTGTGATGCGGAGA...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCCAAACTGCTTCATGCTaGAGTCAGTCCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPQTASC*SQSLQP
Trigger: CGGCTGGAGGGACTGACTTCAGCATGAAGCAGTTTG...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTTCTCCTCCAACCTGCTaGGCTGGAACAGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTSPPTC*AGTELS
Trigger: TGAAAGCTCTGTTCCAGCTCAGCAGGTTGGAGGAGA...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGAAGTTCTGCAGGCCTaGGCAGTTGAGGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSEVLQA*AVEVQQ
Trigger: CTGTTGCACCTCAACTGCTCAGGCCTGCAGAACTTC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCCGGAGCCTCTCGCTaGTCCCAGCCAGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADAGASR*SQPGLL
Trigger: TAACAAACCTGGCTGGGATCAGCGAGAGGCTCCGGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCACTGAACGTGGCCGCTaGCTCAGAACAGAGGACATC +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSTERGR*LRTEDI
Trigger: GATGTCCTCTGTTCTGAGTCAGCGGCCACGTTCAGT...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGCCTGGCTTTCCACGCCCAGGATGGAGACTACTCGCCGAGTTCCCAGTATGCTACTGAACGTGGCCGCTaGCTCAGAACAGAGGACATC +
Preference number: 4 (lower is better)
Translates to: SLAFHAQDGDYSPSSQYATERGR*LRTEDI
Trigger: GATGTCCTCTGTTCTGAGTCAGCGGCCACGTTCAGT...AGCATACTGGGAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAAGCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GTGATGAATGAGGCCCGCTTAGCCTTGCCGGCTGCATGGATCAGAGCCTCCACGCTCGCCCTTCCGCATTaGGGGTTACTTCGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VMNEARLALPAAWIRASTLALPH*GLLRLL
Trigger: TAACAACCGAAGTAACCCGCAATGCGGAAGGGCGAG...CGTGGAGGCTCTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTCATTCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCGACCGCAGCAGAAGTaGACGAGGTCTACGGTCATC +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLRPQQK*TRSTVI
Trigger: GATGACCGTAGACCTCGTGCACTTCTGCTGCGGTCG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGCTCCGCCGGTAGAGTaGTTTGACATCCCCACCATC +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLAPPVE*FDIPTI
Trigger: GATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCTCCGCCGGTAGAGTaGTTTGACATCCCCACCATC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLAPPVE*FDIPTI
Trigger: GATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp ATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCATGTCCAAGCTCACACATCTCTaGAGGTCAAGGACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MPTSVRRAASMRSVSPMSKLTHL*RSRTAW
Trigger: CCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT...GGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGATGCTCAGAGCAAATaGCAACCAGCGTACGCAGAG +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTDAQSK*QPAYAE
Trigger: CTCTGCGTACGCTGGTTGGCATTTGCTCTGAGCATC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCCGAGTTCCCAGTATaGTCAGGGTTGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLAEFPV*SGLPLS
Trigger: GGACAGTGGCAACCCTGAGCATACTGGGAACTCGGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTCCCTGGGCAACCACAGTGCCTCGGTCCTCTACCTCTTCCACTAAAGCCAAGACTTAGCCTTGCCGGCTaGATGGATCAGAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LPGQPQCLGPLPLPLKPRLSLAG*MDQSLH
Trigger: GTGGAGGCTCTGATCCATGCAGCCGGCAAGGCTAAG...TCTTGGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGCGCCCGGATGCGGATaGTGTCCTTCTCGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVAPGCG*CPSRCT
Trigger: AGTGCAGCGAGAAGGACAGCATCCGCATCCGGGCGC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TGGGCTCCAAGCTCACACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCGTCGATCTGGTCATTaGACAGCCACTTTCGACACT +
Preference number: 4 (lower is better)
Translates to: WAPSSHISAGQGQPGPGGRRSGH*TATFDT
Trigger: AGTGTCGAAAGTGGCTGTGCAATGACCAGATCGACG...GCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCAGTCATAGCTGTTGGTaGAGTTCACCAGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSSHSCW*SSPALR
Trigger: CCTCAGCGCTGGTGAACTGCACCAACAGCTATGACT...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTAGTCATAGCTGTTGGTaGAGTTCACCAGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTSHSCW*SSPALR
Trigger: CCTCAGCGCTGGTGAACTGCACCAACAGCTATGACT...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTCCCTGGGCAACCACAGTGCCTCGGTCCTCTACCTCTTCCACTAAAGCCAAGATGCTGCTCGGGCACATaGTGCTTGGCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPGQPQCLGPLPLPLKPRCCSGT*CLAYLA
Trigger: GGCCAAGTATGCCAAGCAGCATGTGCCCGAGCAGCA...TCTTGGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCTGAGCAGTTGAGGTaGAACAGGGAGACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSPEQLR*NRETRG
Trigger: GCCCCTCGTCTCCCTGTTGCACCTCAACTGCTCAGG...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGAGCGCCTCGAAGTTCTaGAGGCCTGAGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLSASKF*RPEQLR
Trigger: CCTCAACTGCTCAGGCCTGCAGAACTTCGAGGCGCT...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TTGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGAGCGCCTCGAAGTTCTaGAGGCCTGAGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVDDPEGEAVVGVLERLPSASKF*RPEQLR
Trigger: CCTCAACTGCTCAGGCCTGCAGAACTTCGAGGCGCT...CGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCATGCACTCCGTGGCTaGCCGGCGGATCATCTCATG +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSHALRG*PADHLM
Trigger: CATGAGATGATCCGCCGGGCAGCCACGGAGTGCATG...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATTGGCCAAGTTACACATaGACTCCGTGGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADWPSYT*TPWLPG
Trigger: GCCGGGCAGCCACGGAGTGCATGTGTAACTTGGCCA...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCACTCTCCATCAGGGTaGTGGCAATCTCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLHSPSG*WQSPSR
Trigger: CCTCGAGGGAGATTGCCAGCACCCTGATGGAGAGTG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTTGGCATACTTGGCCAGCTCCACCATCTTGGGGTCGGGCTCCTCGTAGTCATACACTCTCCATCAGGGTaGTGGCAATCTCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LGILGQLHHLGVGLLVVIHSPSG*WQSPSR
Trigger: CCTCGAGGGAGATTGCCAGCACCCTGATGGAGAGTG...TATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCAGGCTGTGTTGGGATaGACCTTCCCCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLQAVLG*TFPIPS
Trigger: GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGCCTCTGTCCTGGTCCTaGGAACCCCAACATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LIDPLAREGHLRVGGDGEPLSWS*EPQHLS
Trigger: AGAGAGATGTTGGGGTTCCCAGGACCAGGACAGAGG...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCATGGACATCCCGGGTaGTCTGGCACAAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLHGHPG*SGTSEG
Trigger: ACCCTCACTTGTGCCAGACCACCCGGGATGTCCATG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp TCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATTGGCAGTGCGGGGCGCTTGGCTCTaGATCGCAGGTGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SFSLHLYRSFSSETPLAVRGAWL*IAGAGK
Trigger: CTTGCCTGCACCTGCGATCCAGAGCCAAGCGCCCCG...CACTGCCAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTTTCCCGGCCAGCCCTTaGCCCTCAAACCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSFPASP*PSNQLL
Trigger: CAAGAGCTGGTTTGAGGGCCAAGGGCTGGCCGGGAA...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CATCCTCCACAAACTCTTCCTTCACGTCGGCATCAAAGGTCAGGTAAGCCAGGCGTTGCCAGCGTCACATaGGCCCTGCAGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HPPQTLPSRRHQRSGKPGVASVT*ALQEAG
Trigger: TCCTGCCTCCTGCAGGGCCCATGTGACGCTGGCAAC...GCCTGGCTTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGTGCCTGCGTCGATCTaGTCATTGCACAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSVPASI*SLHSHF
Trigger: AAAGTGGCTGTGCAATGACCAGATCGACGCAGGCAC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGCTGCTTGGCATACTTaGCCAGCTCCACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSAAWHT*PAPPSW
Trigger: CCAAGATGGTGGAGCTGGCCAAGTATGCCAAGCAGC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATAGCCCGCACGAAGCTTaGCTTGTCCTTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADSPHEA*LVLGVL
Trigger: CAGCACCCCAAGGACAAGCCAAGCTTCGTGCGGGCT...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGCTCTCTGCAGGAACTaGTCAGCACAGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSALCRN*SAQGSP
Trigger: CGGAGAGCCCTGTGCTGACCAGTTCCTGCAGAGAGC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGTACACATGCACTCCGTaGCTGCCCGGCGGATCATCT +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLYTCTP*LPGGSS
Trigger: AGATGATCCGCCGGGCAGCCACGGAGTGCATGTGTA...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CACATCTCTGCAGGTCAAGGACAGCCTGGTCCAGGCGGCCCAGCTTCTCTAGGGGCACCTCCTTGCTCATaGCCAAGTTACACATGCACT +
Preference number: 4 (lower is better)
Translates to: HISAGQGQPGPGGPASLGAPPCS*PSYTCT
Trigger: AGTGCATGTGTAACTTGGCCATGAGCAAGGAGGTGC...CCCTAGAGAAGCTGGGCCGCCTGGACCAGGCTGTCCTTGACCTGCAGAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCAGTGTGTGGTCACTTaGGGAATGCGGCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLQCVVT*GMRLQS
Trigger: GCTCTGCAGCCGCATTCCCCAAGTGACCACACACTG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCTCTCCATCAGGGTGCTaGCAATCTCCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLSPSGC*QSPSRP
Trigger: AGGCCTCGAGGGAGATTGCCAGCACCCTGATGGAGA...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR CAA 72 bp TCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTaGAGAGACTTCCGGGGCACCGCTTTAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SMTQRVRLLLGS*RDFRGTALIRR
Trigger: CCTCCTGATTAAAGCGGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 72 bp AGACCTTGGTCGATGACCCAGAGGGTGAGGCTGTTGTaGGGGTCCTTGAGAGACTTCCGGGGCACCGCTTTA +
Preference number: 4 (lower is better)
Translates to: RPWSMTQRVRLL*GSLRDFRGTAL
Trigger: TAAAGCGGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 72 bp TCTCCACTGTACAGCACCAGCAGCTTCAGTCGGTCATaGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SPLYSTSSFSRS*PWASKRSCTSL
Trigger: CAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGCTGCTGGTGCTGTACAGTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTTCTCTTTCTAGGCCGTaGCTCAAGCCGCGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSSLSRP*LKPRGK
Trigger: TTTCCCGCGCGGCTTGAGTCACGGCCTAGAAAGAGA...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTAGCACCACCAGGTTCTaGGAAGCCTTTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCSTTRF*EAFCFF
Trigger: GAAAAAGCAAAAGGCTTCTCAGAACCTGGTGGTGCT...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTAAACGTTGCAAGAGCTaGACCCCATTACTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTKRCKS*TPLLRK
Trigger: CTTCCGGAGTAATGGGGTTCAGCTCTTGCAACGTTT...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp ATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCATGTCCTCTCCGCATCACACTTaGGGTCATCAAAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: MPTSVRRAASMRSVSPMSSPHHT*GHQRAC
Trigger: GCAAGCTCTTTGATGACCTCAAGTGTGATGCGGAGA...GGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCATTGGCAGTGATGAATaGGGCCCGCTTAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLIGSDE*GPLSLA
Trigger: GGCAAGGCTAAGCGGGCCTCATTCATCACTGCCAAT...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTATTGGCAGTGATGAATaGGGCCCGCTTAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVIGSDE*GPLSLA
Trigger: GGCAAGGCTAAGCGGGCCTCATTCATCACTGCCAAT...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTCTCCTCCAACCTGCTaGGCTGGAACAGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSSPPTC*AGTELS
Trigger: TGAAAGCTCTGTTCCAGCTCAGCAGGTTGGAGGAGA...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTCGTCGATCTGGTCATTaGACAGCCACTTTCGACACT +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTRRSGH*TATFDT
Trigger: AGTGTCGAAAGTGGCTGTGCAATGACCAGATCGACG...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGTCTCCGTCTTCACCATaGACACCATGGCCGACACCA +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLSPSSP*TPWPTP
Trigger: TGGTGTCGGCCATGGTGTGCATGGTGAAGACGGAGA...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTACTGATGAGGACCTTCAGCTCCCGGGCAGGATCCACAATGATGGCACCTTCCCTGGGCAACCACAGTaGCTCGGTCCTCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: VTDEDLQLPGRIHNDGTFPGQPQ*LGPLPL
Trigger: AAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGG...GAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATCAGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATAGCGCCTCGAAGTTCTaGAGGCCTGAGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADSASKF*RPEQLR
Trigger: CCTCAACTGCTCAGGCCTGCAGAACTTCGAGGCGCT...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGCATGCACTCCGTGGCTaGCCGGCGGATCATCTCATG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVHALRG*PADHLM
Trigger: CATGAGATGATCCGCCGGGCAGCCACGGAGTGCATG...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CTCCCTGGGCAACCACAGTGCCTCGGTCCTCTACCTCTTCCACTAAAGCCAAGAGCTTCAGTCGGTCATTaGCCTGGGCTTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LPGQPQCLGPLPLPLKPRASVGH*PGLRRG
Trigger: ACCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGC...TCTTGGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGAAGCCCATATTCCACTaGTTTGTCCAGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRKPIFH*FVQAGC
Trigger: GCAGCCTGCCTGGACAAAGCAGTGGAATATGGGCTT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAAGCCCATATTCCACTaGTTTGTCCAGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPKPIFH*FVQAGC
Trigger: GCAGCCTGCCTGGACAAAGCAGTGGAATATGGGCTT...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGACCACCAGCCAAAGCTaGTTCCGTCCTTACTCTCCG +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLTTSQS*FRPYSP
Trigger: CGGAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGT...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCCAAGAGTATTGGGCATaGCAGCCACCACCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPQEYWA*QPPPAK
Trigger: TTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTG...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCATCATCTCACTCTCCATCAGGGTGCTGGCAATCTCCCTCGAGGCCTCCACCCAAGAGTATTGGGCATaGCAGCCACCACCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SIISLSIRVLAISLEASTQEYWA*QPPPAK
Trigger: TTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTG...GGTGGAGGCCTCGAGGGAGATTGCCAGCACCCTGATGGAGAGTGAGATGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTGCGGACAGATTGACTTaGTACAGGGCCTCAAATTCA +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCADRLT*YRASNS
Trigger: TGAATTTGAGGCCCTGTACCAAGTCAATCTGTCCGC...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCATCTTTTTCAGACCTTaGTCGATGACCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFIFFRP*SMTQRV
Trigger: CACCCTCTGGGTCATCGACCAAGGTCTGAAAAAGAT...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGCGTAGTCATAGCTGTTaGTGCAGTTCACCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRRSHSC*CSSPAL
Trigger: CAGCGCTGGTGAACTGCACCAACAGCTATGACTACG...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CATCCTCCACAAACTCTTCCTTCACGTCGGCATCAAAGGTCAGGTAAGCCAGGCCCAGCTCCACCATCTTaGGGTCGGGCTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: HPPQTLPSRRHQRSGKPGPAPPS*GRAPRS
Trigger: ACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGG...GCCTGGCTTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCTGCTTGGCATACTTaGCCAGCTCCACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLAAWHT*PAPPSW
Trigger: CCAAGATGGTGGAGCTGGCCAAGTATGCCAAGCAGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGTCACCATGCACACCATaGCCGACACCACACCCGCTG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVSPCTP*PTPHPL
Trigger: CAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGA...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CCCACCTCTGTCAGCAGATCTAAGAGGTTACTGATGAGGACCTTCAGCTCCCGGAGTCGGTCATTGCCCTaGGCTTCGAAGAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTSVSRSKRLLMRTFSSRSRSLP*ASKRSC
Trigger: GCAGGACCTCTTCGAAGCCCAGGGCAATGACCGACT...CCGGGAGCTGAAGGTCCTCATCAGTAACCTCTTAGATCTGCTGACAGAGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGCTTGTGACAGGGCTGTaGTCACCCTTAGCTAGCACT +
Preference number: 4 (lower is better)
Translates to: LIDPLAREGHLRVGGDGELVTGL*SPLAST
Trigger: AGTGCTAGCTAAGGGTGACCACAGCCCTGTCACAAG...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGATGGGCAAGAGTATTaGGCATGCCAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLDGQEY*ACQPPP
Trigger: TGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGGCAGCAAGCGAGGATaGGCAAGAGTATTGGGCATG +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLGSKRG*ARVLGM
Trigger: CATGCCCAATACTCTTGCCCATCCTCGCTTGCTGCC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCTCTACACACTTTTATTaGAGGGGCAGGCCTGATAGC +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPSTHFY*RGRPDS
Trigger: GCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGA...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR CAA 72 bp TGGCCCCCGATGTTCCGCAAGGCCTCCTGGAAAACTTaGTTCTTGGGCTCCAAGCTCACACATCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WPPMFRKASWKT*FLGSKLTHLCR
Trigger: CCTGCAGAGATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCAGGAGGCCTTGCGGAACATCGGGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp TTGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGCCGGTAGAGTGCTTTaGCATCCCCACCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: LVDDPEGEAVVGVLERLPAGRVL*HPHHPF
Trigger: AAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGC...CGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAAGCACCACCAGGTTCTaGGAAGCCTTTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPSTTRF*EAFCFF
Trigger: GAAAAAGCAAAAGGCTTCTCAGAACCTGGTGGTGCT...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTAGCACCACCAGGTTCTaGGAAGCCTTTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTSTTRF*EAFCFF
Trigger: GAAAAAGCAAAAGGCTTCTCAGAACCTGGTGGTGCT...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCAAACGTTGCAAGAGCTaGACCCCATTACTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSKRCKS*TPLLRK
Trigger: CTTCCGGAGTAATGGGGTTCAGCTCTTGCAACGTTT...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGGTTGCCACTGTCCGTaGCTGATGCTCAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLGCHCP*LMLRAN
Trigger: ATTTGCTCTGAGCATCAGTCACGGACAGTGGCAACC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CCCACCTCTGTCAGCAGATCTAAGAGGTTACTGATGAGGACCTTCAGCTCCCGGGGGCAGGATCCACAATaGTGGCACCTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PTSVSRSKRLLMRTFSSRGQDPQ*WHLLCL
Trigger: GAGGCAAAGAAGGTGCCATCATTGTGGATCCTGCCC...CCGGGAGCTGAAGGTCCTCATCAGTAACCTCTTAGATCTGCTGACAGAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATATTGGCAGTGATGAATaGGGCCCGCTTAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADIGSDE*GPLSLA
Trigger: GGCAAGGCTAAGCGGGCCTCATTCATCACTGCCAAT...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCTCTCCTCCAACCTGCTaGGCTGGAACAGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLSPPTC*AGTELS
Trigger: TGAAAGCTCTGTTCCAGCTCAGCAGGTTGGAGGAGA...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGGTTTGTTAGGGCCATaGGCGCCTCGAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSGLLGP*APRSSA
Trigger: TGCAGAACTTCGAGGCGCTCATGGCCCTAACAAACC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTACTGAACGTGGCCGCTaGCTCAGAACAGAGGACATC +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSTERGR*LRTEDI
Trigger: GATGTCCTCTGTTCTGAGTCAGCGGCCACGTTCAGT...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTCCAAGCAGGGCTGTGTaGCTGAACGTGGCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFPSRAV*LNVAAD
Trigger: GTCAGCGGCCACGTTCAGTCACACAGCCCTGCTTGG...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCAAGCTCACACATCTCTaGAGGTCAAGGACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLKLTHL*RSRTAW
Trigger: CCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTT...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGCCGAGTTCCCAGTATaGTCAGGGTTGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVAEFPV*SGLPLS
Trigger: GGACAGTGGCAACCCTGAGCATACTGGGAACTCGGC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTTGCTGTCCTTCTCGCTaGACTTATATAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GEAADVCALPDAPGSTGCCCPSR*TYIGPS
Trigger: TGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCA...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCTGCTGTCCTTCTCGCTaGACTTATATAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFCCPSR*TYIGPS
Trigger: TGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCA...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGAGCCTTCAGCAAACTaGTTCATGCTGAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSEPSAN*FMLKSV
Trigger: GACTGACTTCAGCATGAAGCAGTTTGCTGAAGGCTC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCCGTCGATCTGGTCATTaGACAGCCACTTTCGACACT +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSRRSGH*TATFDT
Trigger: AGTGTCGAAAGTGGCTGTGCAATGACCAGATCGACG...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTACAATAGGTAGCGTGTaGATGAGCCTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSTIGSV*MSLGPR
Trigger: CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGT...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTGATGAATGAGGCCCGCTTAGCCTTGCCGGCTGCATGGATCAGAGCCTCCACGGCGGACAGATTGACTTaGTACAGGGCCTCAAATTCA +
Preference number: 4 (lower is better)
Translates to: VMNEARLALPAAWIRASTADRLT*YRASNS
Trigger: TGAATTTGAGGCCCTGTACCAAGTCAATCTGTCCGC...CGTGGAGGCTCTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTCATTCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCGGAAAACTTTGTTCTTaGGCTCCAAGCTCACACATC +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPGKLCS*APSSHI
Trigger: GATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCC...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTTCCGCAAGGCCTCCTaGAAAACTTTGTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSFRKAS*KTLFLG
Trigger: GCCCAAGAACAAAGTTTTCCAGGAGGCCTTGCGGAA...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCTTCCGCAAGGCCTCCTaGAAAACTTTGTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPFRKAS*KTLFLG
Trigger: GCCCAAGAACAAAGTTTTCCAGGAGGCCTTGCGGAA...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTACTGATGAGGACCTTCAGCTCCCGGGCAGGATCCACAATGATGGCACCTTCTTTCCACGCCCAGGATaGAGACTACTCGCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: VTDEDLQLPGRIHNDGTFFPRPG*RLLAEF
Trigger: GAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAA...GAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATCAGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp CCCACCTCTGTCAGCAGATCTAAGAGGTTACTGATGAGGACCTTCAGCTCCCGGAAGCCAAGAAGACCCTaGAGAGCAGCTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTSVSRSKRLLMRTFSSRKPRRP*RAALCR
Trigger: CCTGCAGAGAGCTGCTCTCCAGGGTCTTCTTGGCTT...CCGGGAGCTGAAGGTCCTCATCAGTAACCTCTTAGATCTGCTGACAGAGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGTACACATGCACTCCGTaGCTGCCCGGCGGATCATCT +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVYTCTP*LPGGSS
Trigger: AGATGATCCGCCGGGCAGCCACGGAGTGCATGTGTA...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGCACCTCCTTGCTCATaGCCAAGTTACACATGCACT +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRAPPCS*PSYTCT
Trigger: AGTGCATGTGTAACTTGGCCATGAGCAAGGAGGTGC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGCAGTGTGTGGTCACTTaGGGAATGCGGCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVQCVVT*GMRLQS
Trigger: GCTCTGCAGCCGCATTCCCCAAGTGACCACACACTG...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCTTGTGACAGGGCTGTaGTCACCCTTAGCTAGCACT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLLVTGL*SPLAST
Trigger: AGTGCTAGCTAAGGGTGACCACAGCCCTGTCACAAG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
3UTR CAA 72 bp TCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTaGTCCAGGCAGGCTGCAGCAGCCCTTGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: SWLGWISPYSTA*SRQAAAALVTG
Trigger: CCCTGTCACAAGGGCTGCTGCAGCCTGCCTGGACAAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
3UTR CAA 72 bp TGGGCCCAGGGACAACCCCCTCACTCTCCATCTTGGTaGGGTTGGATAAGCCCATATTCCACTGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: WAQGQPPHSPSW*GWISPYSTALS
Trigger: GGACAAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGTTGTCCCTGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGAAGAGCGGACAGATTaGCTTGGTACAGGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADEERTD*LGTGPQ
Trigger: TTGAGGCCCTGTACCAAGTCAATCTGTCCGCTCTTC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGAAGAGCGGACAGATTaGCTTGGTACAGGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSEERTD*LGTGPQ
Trigger: TTGAGGCCCTGTACCAAGTCAATCTGTCCGCTCTTC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGAAACGTTGCAAGAGCTaGACCCCATTACTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLKRCKS*TPLLRK
Trigger: CTTCCGGAGTAATGGGGTTCAGCTCTTGCAACGTTT...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGCCACTGTCCGTGACTaGTGCTCAGAGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVATVRD*CSEQMP
Trigger: TGGCATTTGCTCTGAGCATCAGTCACGGACAGTGGC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGAAGTTCTGCAGGCCTaGGCAGTTGAGGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVEVLQA*AVEVQQ
Trigger: CTGTTGCACCTCAACTGCTCAGGCCTGCAGAACTTC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp CATCCTCCACAAACTCTTCCTTCACGTCGGCATCAAAGGTCAGGTAAGCCAGGCGGTTTGTTAGGGCCATaGGCGCCTCGAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HPPQTLPSRRHQRSGKPGGLLGP*APRSSA
Trigger: TGCAGAACTTCGAGGCGCTCATGGCCCTAACAAACC...GCCTGGCTTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp ATGCTGTCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATTGGAAAAAGGGCCCCTCTaGGTGAGGCTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: MLSFSLHLYRSFSSETPLEKGPL*VRLQAV
Trigger: CACTGCCTGCAGCCTCACTCAGAGGGGCCCTTTTTC...CAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGCCACTTTCGACACTaGTTAGCCAGTTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPSHFRH*LASLRV
Trigger: CACTCTCAAACTGGCTAAGCAGTGTCGAAAGTGGCT...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGAGCCACTTTCGACACTaGTTAGCCAGTTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: WSMTQRVRLLLGSLRDFRSHFRH*LASLRV
Trigger: CACTCTCAAACTGGCTAAGCAGTGTCGAAAGTGGCT...CCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGCTTCAGTCGGTCATTaGCCTGGGCTTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVASVGH*PGLRRG
Trigger: ACCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATAAGCCCATATTCCACTaGTTTGTCCAGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADKPIFH*FVQAGC
Trigger: GCAGCCTGCCTGGACAAAGCAGTGGAATATGGGCTT...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCAAGAGTATTGGGCATaGCAGCCACCACCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSQEYWA*QPPPAK
Trigger: TTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTG...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCCCTTTTCAATGGCTTTaGATGCCTCTGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPPFQWL*MPLFLL
Trigger: AAGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGG...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGACATCTGTTCCACTTTaGCATCCGTCGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRTSVPL*HPSRTC
Trigger: ACATGTCCTCGACGGATGCCAAAGTGGAACAGATGT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCACATCTGTTCCACTTTaGCATCCGTCGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPTSVPL*HPSRTC
Trigger: ACATGTCCTCGACGGATGCCAAAGTGGAACAGATGT...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAAGTGCCCTTCTCTTCTaGGTCCAACAGTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: RPDSRLTAGEAADVCALPSALLF*VQQYLK
Trigger: TTTCAGATACTGTTGGACCCAGAAGAGAAGGGCACT...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGTTTCCACGCCCAGGATaGAGACTACTCGCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVFPRPG*RLLAEF
Trigger: GAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAA...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCATCTTTTTCAGACCTTaGTCGATGACCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSIFFRP*SMTQRV
Trigger: CACCCTCTGGGTCATCGACCAAGGTCTGAAAAAGAT...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGCTTGCTGAGGAGAATAGAGGCGCTCATGCGGCTGTTTGCGGTCACTGCGAGATCTTTTTCAGACCTTaGTCGATGACCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ELAEENRGAHAAVCGHCEIFFRP*SMTQRV
Trigger: CACCCTCTGGGTCATCGACCAAGGTCTGAAAAAGAT...CTCGCAGTGACCGCAAACAGCCGCATGAGCGCCTCTATTCTCCTCAGCAAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp ATGCTGTCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATTGTTCCCGGCCAGCCCTTaGCCCTCAAACCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: MLSFSLHLYRSFSSETPLFPASP*PSNQLL
Trigger: CAAGAGCTGGTTTGAGGGCCAAGGGCTGGCCGGGAA...CAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGCCTGCGTCGATCTaGTCATTGCACAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADVPASI*SLHSHF
Trigger: AAAGTGGCTGTGCAATGACCAGATCGACGCAGGCAC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATCGTAGTCATAGCTGTTaGTGCAGTTCACCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADRSHSC*CSSPAL
Trigger: CAGCGCTGGTGAACTGCACCAACAGCTATGACTACG...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTACTGATGAGGACCTTCAGCTCCCGGGCAGGATCCACAATGATGGCACCTTCCGTAGTCATAGCTGTTaGTGCAGTTCACCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: VTDEDLQLPGRIHNDGTFRSHSC*CSSPAL
Trigger: CAGCGCTGGTGAACTGCACCAACAGCTATGACTACG...GAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATCAGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp ATGCTGTCCTTCTCGCTGCACTTATATAGGTCCTTCAGCAGCGAGACACCATTGTCACCATGCACACCATaGCCGACACCACACCCGCTG +
Preference number: 4 (lower is better)
Translates to: MLSFSLHLYRSFSSETPLSPCTP*PTPHPL
Trigger: CAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGA...CAATGGTGTCTCGCTGCTGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCTGTAGCCTTCTATCATaGGCACAGCCTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPCSLLS*AQPSPS
Trigger: TGAAGGAGAAGGCTGTGCCCATGATAGAAGGCTACA...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCACCTCCTTGCTCATaGCCAAGTTACACATGCACT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLAPPCS*PSYTCT
Trigger: AGTGCATGTGTAACTTGGCCATGAGCAAGGAGGTGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp CATCCTCCACAAACTCTTCCTTCACGTCGGCATCAAAGGTCAGGTAAGCCAGGCGATGGGCAAGAGTATTaGGCATGCCAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: HPPQTLPSRRHQRSGKPGDGQEY*ACQPPP
Trigger: TGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATC...GCCTGGCTTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR TCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTTTCTCTGGATGCCCATaGGAGTTCACTACCACCTCT +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSFSGCP*EFTTTS
Trigger: AGAGGTGGTAGTGAACTCTCATGGGCATCCAGAGAA...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR TCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATCGTAGTCTCCACATTTaGACAGCTCATTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADRSLHI*TAHCPP
Trigger: AGGAGGGCAATGAGCTGTTCAAATGTGGAGACTACG...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATTCTCCGCATCACACTTaGGGTCATCAAAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADSPHHT*GHQRAC
Trigger: GCAAGCTCTTTGATGACCTCAAGTGTGATGCGGAGA...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCGGATGCCTCTGTTTCTaGTTTGTCGTAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPGCLCF*FVVIFQ
Trigger: CTGGAAGATTACGACAAAGCAGAAACAGAGGCATCC...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TCCATCATCTCACTCTCCATCAGGGTGCTGGCAATCTCCCTCGAGGCCTCCACCGGATGCCTCTGTTTCTaGTTTGTCGTAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SIISLSIRVLAISLEASTGCLCF*FVVIFQ
Trigger: CTGGAAGATTACGACAAAGCAGAAACAGAGGCATCC...GGTGGAGGCCTCGAGGGAGATTGCCAGCACCCTGATGGAGAGTGAGATGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTTTCAATGGCTTTGGATaGCTCTGTTTCTGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTFNGFG*LCFCFV
Trigger: GACAAAGCAGAAACAGAGGCATCCAAAGCCATTGAA...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGATGCTCAGAGCAAATaGCAACCAGCGTACGCAGAG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVDAQSK*QPAYAE
Trigger: CTCTGCGTACGCTGGTTGGCATTTGCTCTGAGCATC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGTCATAGCTGTTGGTaGAGTTCACCAGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVSHSCW*SSPALR
Trigger: CCTCAGCGCTGGTGAACTGCACCAACAGCTATGACT...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTCCTTTTCAATGGCTTTaGATGCCTCTGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTPFQWL*MPLFLL
Trigger: AAGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGG...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGGAAAACTTTGTTCTTaGGCTCCAAGCTCACACATC +
Preference number: 4 (lower is better)
Translates to: SKRGWARVLGMPATTSQSGKLCS*APSSHI
Trigger: GATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGAGTGCCCTTCTCTTCTaGGTCCAACAGTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRSALLF*VQQYLK
Trigger: TTTCAGATACTGTTGGACCCAGAAGAGAAGGGCACT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCTGTAGCCTTCTATCATaGGCACAGCCTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLCSLLS*AQPSPS
Trigger: TGAAGGAGAAGGCTGTGCCCATGATAGAAGGCTACA...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCTCTACACACTTTTATTaGAGGGGCAGGCCTGATAGC +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLSTHFY*RGRPDS
Trigger: GCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGA...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGCCTGGCTTTCCACGCCCAGGATGGAGACTACTCGCCGAGTTCCCAGTATGCTTTCAATGGCTTTGGATaGCTCTGTTTCTGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLAFHAQDGDYSPSSQYAFNGFG*LCFCFV
Trigger: GACAAAGCAGAAACAGAGGCATCCAAAGCCATTGAA...AGCATACTGGGAACTCGGCGAGTAGTCTCCATCCTGGGCGTGGAAAGCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGTGCTGTCCTTCTCGCTaGACTTATATAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLCCPSR*TYIGPS
Trigger: TGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCA...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGAGCCTTCAGCAAACTaGTTCATGCTGAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSEPSAN*FMLKSV
Trigger: GACTGACTTCAGCATGAAGCAGTTTGCTGAAGGCTC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTACTGATGAGGACCTTCAGCTCCCGGGCAGGATCCACAATGATGGCACCTTCGAGCCTTCAGCAAACTaGTTCATGCTGAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VTDEDLQLPGRIHNDGTFEPSAN*FMLKSV
Trigger: GACTGACTTCAGCATGAAGCAGTTTGCTGAAGGCTC...GAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATCAGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTACCACCAGCCAAAGCTaGTTCCGTCCTTACTCTCCG +
Preference number: 4 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFTTSQS*FRPYSP
Trigger: CGGAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGT...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCCATCTTGGTTGGGTTaGATAAGCCCATATTCCACT +
Preference number: 4 (lower is better)
Translates to: EYWACQPPPAKAASVLTLPSWLG*ISPYST
Trigger: AGTGGAATATGGGCTTATCCAACCCAACCAAGATGG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGCCACTTTCGACACTaGTTAGCCAGTTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVSHFRH*LASLRV
Trigger: CACTCTCAAACTGGCTAAGCAGTGTCGAAAGTGGCT...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGACATCTGTTCCACTTTaGCATCCGTCGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVTSVPL*HPSRTC
Trigger: ACATGTCCTCGACGGATGCCAAAGTGGAACAGATGT...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGTCTACACACTTTTATTaGAGGGGCAGGCCTGATAGC +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVSTHFY*RGRPDS
Trigger: GCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGA...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR TCA 90 bp ACCCCCTCACTCTCCATCTTGGTTGGGTTGGATAAGCCCATATTCCACTGCTTTCGTAGTCTCCACATTTaGACAGCTCATTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TPSLSILVGLDKPIFHCFRSLHI*TAHCPP
Trigger: AGGAGGGCAATGAGCTGTTCAAATGTGGAGACTACG...AAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR GCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGGATGCCTCTGTTTCTaGTTTGTCGTAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVGCLCF*FVVIFQ
Trigger: CTGGAAGATTACGACAAAGCAGAAACAGAGGCATCC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR GCA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATTTCAATGGCTTTGGATaGCTCTGTTTCTGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADFNGFG*LCFCFV
Trigger: GACAAAGCAGAAACAGAGGCATCCAAAGCCATTGAA...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp TTTTCACAAAGTCTGTGGAAATTCTCCCTCTCCGCATCACACTTGAGGTCATCAGAGAGAGAGGTTGGCTaGACAAGGGTCACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FSQSLWKFSLSASHLRSSEREVG*TRVTQL
Trigger: CAGCTGGGTGACCCTTGTCCAGCCAACCTCTCTCTC...TGATGACCTCAAGTGTGATGCGGAGAGGGAGAATTTCCACAGACTTTGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGGAAAACTTTGTTCTTaGGCTCCAAGCTCACACATC +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVGKLCS*APSSHI
Trigger: GATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGCCATCTTGGTTGGGTTaGATAAGCCCATATTCCACT +
Preference number: 4 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVPSWLG*ISPYST
Trigger: AGTGGAATATGGGCTTATCCAACCCAACCAAGATGG...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CCA 90 bp TCTCTTCTGGGTCCAACAGTATCTGAAACATCTGTTCCACTTTGGCATCCGTCGTTCCGCAAGGCCTCCTaGAAAACTTTGTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SLLGPTVSETSVPLWHPSFRKAS*KTLFLG
Trigger: GCCCAAGAACAAAGTTTTCCAGGAGGCCTTGCGGAA...CGACGGATGCCAAAGTGGAACAGATGTTTCAGATACTGTTGGACCCAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS CCA 90 bp GCCTGCAGGGAGCTCGCGGCGGAGGACCCAGAGGGAGGCCTGCGGTaGCTCCAGCCCAGACTCCGGCCCCGACCGCAGCAGAAGTGCACG +
Preference number: 5 (lower is better)
Translates to: ACRELAAEDPEGGLR*LQPRLRPRPQQKCT
Trigger: CGTGCACTTCTGCTGCGGTCGGGGCCGGAGTCTGGGCTGGAGCCACCGCAGGCCTCCCTCTGGGTCCTCCGCCGCGAGCTCCCTGCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639885.1
CDS CCA 90 bp ACCTGCAGGGAGCTCGCGGCGGAGGACCCAGAGGGAGGCCTGCGGTaGCTCCAGCCCAGACTCCGGCCCCGACCGCAGCAGAAGTGCACG +
Preference number: 5 (lower is better)
Translates to: TCRELAAEDPEGGLR*LQPRLRPRPQQKCT
Trigger: CGTGCACTTCTGCTGCGGTCGGGGCCGGAGTCTGGGCTGGAGCCACCGCAGGCCTCCCTCTGGGTCCTCCGCCGCGAGCTCCCTGCAGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000461266.5
ENST00000672480.1
CDS-3UTR CAA 90 bp GCCCGCGCAGGCGCAGTCTCTGGGGCGGGGCGAGTCTGGGTTCGGGACGCCACCAGGAGGGTCAGGGCATaGTCTCGGCCTTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ARAGAVSGAGRVWVRDATRRVRA*SRPWPE
Trigger: CTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCCT...GGTGGCGTCCCGAACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GCCCGCGCAGGCGCAGTCTCTGGGGCGGGGCGAGTCTGGGTTCGGGACGCCACCCCCTCACTCTCCATCTaGGTTGGGTTGGATAAGCCC +
Preference number: 5 (lower is better)
Translates to: ARAGAVSGAGRVWVRDATPSLSI*VGLDKP
Trigger: GGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGG...GGTGGCGTCCCGAACCCAGACTCGCCCCGCCCCAGAGACTGCGCCTGCGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GGGCACCGCTTTAATCAGGAGGGTCAGGGCATTGTCTCGGCCTTGGCCAGAGACGCAGGGGCGGGGCGCTaGGCTCTGGATCGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GHRFNQEGQGIVSALARDAGAGR*ALDRRC
Trigger: GCACCTGCGATCCAGAGCCAAGCGCCCCGCCCCTGC...GTCTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCCTGATTAAAGCGGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGCAGGGGCGGGGCGCTaGGCTCTGGATCGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSAGAGR*ALDRRC
Trigger: GCACCTGCGATCCAGAGCCAAGCGCCCCGCCCCTGC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CAA 90 bp CAGGGAGACGAGGGGCCGGACCACCTCATAGATCCGCTCGCCAGGGAAGGTCATGGCATTGTCTCGGCCTaGGCCAGAGACCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: QGDEGPDHLIDPLAREGHGIVSA*ARDPHL
Trigger: GAGGTGGGGGTCTCTGGCCAAGGCCGAGACAATGCC...ATGACCTTCCCTGGCGAGCGGATCTATGAGGTGGTCCGGCCCCTCGTCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAAGCTCCAAGGCCCGGTaGCCAGCGTCACATGGGCCC +
Preference number: 5 (lower is better)
Translates to: RPDSRLTAGEAADVCALPSSKAR*PASHGP
Trigger: GGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGCT...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGGGCCTGGGCTGCCTTaGTCTGCCCCACGTCCGTGC +
Preference number: 5 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRGPGLP*SAPRPC
Trigger: GCACGGACGTGGGGCAGACAAAGGCAGCCCAGGCCC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS GCA 90 bp AGCCTAGGACCTTCACAGGCACCAGTGTGGAGGGGCCAAGGAGCTTaGCTGCTTCCGCGTCACTCTCTCAGCGGGACGGTGTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SLGPSQAPVWRGQGA*LLPRHSLSGTVFLW
Trigger: CCAGAGGAACACCGTCCCGCTGAGAGAGTGACGCGGAAGCAGGCAAGCTCCTTGGCCCCTCCACACTGGTGCCTGTGAAGGTCCTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS CCA 90 bp GCTGCCCAGGCCCAGGCCCCCAATTCCACCCTCAGCTGGGACCCTTaGGTACAGGATGAATTCGGGAAACTCCCAGGCCCCAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: AAQAQAPNSTLSWDP*VQDEFGKLPGPRLW
Trigger: CCAAAGTCTGGGGCCTGGGAGTTTCCCGAATTCATCCTGTACCCAAGGGTCCCAGCTGAGGGTGGAATTGGGGGCCTGGGCCTGGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGTCATCGCGGAGAGGTaGTCTCGTGCCCGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSVIAER*SRARAG
Trigger: GCCTGCGCGGGCACGAGACAACCTCTCCGCGATGAC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGGCATTGTCTCGGCCTaGGCCAGAGACCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSGIVSA*ARDPHL
Trigger: GAGGTGGGGGTCTCTGGCCAAGGCCGAGACAATGCC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTAGGAGGGTCAGGGCATaGTCTCGGCCTTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GEAADVCALPDAPGSTGCRRVRA*SRPWPE
Trigger: CTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCCT...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GGGCACCGCTTTAATCAGGAGGGTCAGGGCATTGTCTCGGCCTTGGCCAGAGACCGCTCATGCGGCTGTTaGCGGTCACTGCGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GHRFNQEGQGIVSALARDRSCGC*RSLRAP
Trigger: GGGAGCTCGCAGTGACCGCAAACAGCCGCATGAGCG...GTCTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCCTGATTAAAGCGGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCCTTCCCGGCCAGCCCTaGGCCCTCAAACCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPLPGQP*ALKPAL
Trigger: AAGAGCTGGTTTGAGGGCCAAGGGCTGGCCGGGAAG...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGGGCCTGGGCTGCCTTaGTCTGCCCCACGTCCGTGC +
Preference number: 5 (lower is better)
Translates to: LVDDPEGEAVVGVLERLPGPGLP*SAPRPC
Trigger: GCACGGACGTGGGGCAGACAAAGGCAGCCCAGGCCC...CGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAGAGGTGATGGTGAGCTaGGCAAGGGCCTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RPDSRLTAGEAADVCALPEVMVS*ARAWAA
Trigger: GGCAGCCCAGGCCCTTGCCAAGCTCACCATCACCTC...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGTCATCGCGGAGAGGTaGTCTCGTGCCCGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: EYWACQPPPAKAASVLTLVIAER*SRARAG
Trigger: GCCTGCGCGGGCACGAGACAACCTCTCCGCGATGAC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTGTCATCGCGGAGAGGTaGTCTCGTGCCCGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVVIAER*SRARAG
Trigger: GCCTGCGCGGGCACGAGACAACCTCTCCGCGATGAC...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCGGCATTGTCTCGGCCTaGGCCAGAGACCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSGIVSA*ARDPHL
Trigger: GAGGTGGGGGTCTCTGGCCAAGGCCGAGACAATGCC...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTCTGTTGTTGGGGTCCTaGAGAGACTTCCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: GEAADVCALPDAPGSTGCLLLGS*RDFRGT
Trigger: GGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAG...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTAAGCTTGGCTTGTCCTaGGGGTGCTGCTCGGGCACA +
Preference number: 5 (lower is better)
Translates to: GEAADVCALPDAPGSTGCKLGLS*GCCSGT
Trigger: TGTGCCCGAGCAGCACCCCAAGGACAAGCCAAGCTT...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTGAGCCCGCACGAAGCTaGGCTTGTCCTTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTEPARS*ACPWGA
Trigger: AGCACCCCAAGGACAAGCCAAGCTTCGTGCGGGCTC...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCGAGCCCGCACGAAGCTaGGCTTGTCCTTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSEPARS*ACPWGA
Trigger: AGCACCCCAAGGACAAGCCAAGCTTCGTGCGGGCTC...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGGGCCTGGGCTGCCTTaGTCTGCCCCACGTCCGTGC +
Preference number: 5 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADGPGLP*SAPRPC
Trigger: GCACGGACGTGGGGCAGACAAAGGCAGCCCAGGCCC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS TCA 90 bp GGACCAGAGCTGAGAGAGAGGTTGGCTGGACAAGGGTCACCCAGCTaGAGAGCAGCAGTAGCCCCACAGATAGGCCTGTCAGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: GPELRERLAGQGSPS*RAAVAPQIGLSARG
Trigger: GCCCCTTGCTGACAGGCCTATCTGTGGGGCTACTGCTGCTCTTCAGCTGGGTGACCCTTGTCCAGCCAACCTCTCTCTCAGCTCTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394275.7
ENST00000480470.5
ENST00000639885.1
ENST00000672480.1
CDS TCA 90 bp CTGGCCGCTGGACAGTCGTGGGCCCCACCCCTTCCCAGGCCACACTaGGAATGGCTCTGTTTCCTTCCATGTCGCACAAAGAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: LAAGQSWAPPLPRPH*EWLCFLPCRTKKPS
Trigger: AGAGGGCTTCTTTGTGCGACATGGAAGGAAACAGAGCCATTCTCAGTGTGGCCTGGGAAGGGGTGGGGCCCACGACTGTCCAGCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS GCA 90 bp AGGAATTCACATGGGCATCCCGGGGCAGAGCAGTACTCAGATAAATaGTGCCCAGGCCCAGGCCCCCAATTCCACCCTCAGCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: RNSHGHPGAEQYSDK*CPGPGPQFHPQLGP
Trigger: GGGTCCCAGCTGAGGGTGGAATTGGGGGCCTGGGCCTGGGCAGCATTTATCTGAGTACTGCTCTGCCCCGGGATGCCCATGTGAATTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS GCA 90 bp ACCAGCGCTGAGGCCACCGCAAAGAGCACTGACCTCTCCTCCAACTaGCAGGACACAGAGGAATTCACATGGGCATCCCGGGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: TSAEATAKSTDLSSN*QDTEEFTWASRGRA
Trigger: TGCTCTGCCCCGGGATGCCCATGTGAATTCCTCTGTGTCCTGGCAGTTGGAGGAGAGGTCAGTGCTCTTTGCGGTGGCCTCAGCGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS CCA 90 bp CAGATAAATGCTGCCCAGGCCCAGGCCCCCAATTCCACCCTCAGCTaGGACCCTTGGGTACAGGATGAATTCGGGAAACTCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: QINAAQAQAPNSTLS*DPWVQDEFGKLPGP
Trigger: GGGGCCTGGGAGTTTCCCGAATTCATCCTGTACCCAAGGGTCCCAGCTGAGGGTGGAATTGGGGGCCTGGGCCTGGGCAGCATTTATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS-3UTR CAA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTCCTCGCCCTTCCGCATaGCGGGTTACTTCGGTTGTT +
Preference number: 5 (lower is better)
Translates to: GEAADVCALPDAPGSTGCPRPSA*RVTSVV
Trigger: AACAACCGAAGTAACCCGCAATGCGGAAGGGCGAGG...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CAA 90 bp CCGGTGCTGCAGCTCCTGGTTGGAGCTCAGAAGCAGGGCCTGCAGGATCTCCAGCATTTGAACAGCTCATaGCCCTCCTTCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PVLQLLVGAQKQGLQDLQHLNSS*PSFRSC
Trigger: GCAGCTGCGGAAGGAGGGCAATGAGCTGTTCAAATG...CTGGAGATCCTGCAGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGCAGCACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGAGGAGGGTCAGGGCATaGTCTCGGCCTTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRRRVRA*SRPWPE
Trigger: CTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCCT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCCAGAGGGTGAGGCTGTaGTTGGGGTCCTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPQRVRL*LGSLRD
Trigger: GTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTG...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGCTTGCTGAGGAGAATAGAGGCGCTCATGCGGCTGTTTGCGGTCACTGCGAGCTTCCCGGCCAGCCCTaGGCCCTCAAACCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: ELAEENRGAHAAVCGHCELPGQP*ALKPAL
Trigger: AAGAGCTGGTTTGAGGGCCAAGGGCTGGCCGGGAAG...CTCGCAGTGACCGCAAACAGCCGCATGAGCGCCTCTATTCTCCTCAGCAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTAGCTCCAAGGCCCGGTaGCCAGCGTCACATGGGCCC +
Preference number: 5 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSSSKAR*PASHGP
Trigger: GGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGCT...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTTACTGATGAGGACCTTCAGCTCCCGGGCAGGATCCACAATGATGGCACCTTCAGCTCCAAGGCCCGGTaGCCAGCGTCACATGGGCCC +
Preference number: 5 (lower is better)
Translates to: VTDEDLQLPGRIHNDGTFSSKAR*PASHGP
Trigger: GGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGCT...GAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATCAGTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGAGGCCCGCTTAGCCTaGCCGGCTGCATGGATCAGA +
Preference number: 5 (lower is better)
Translates to: VLTLRATIGSVCMSLGPREARLA*PAAWIR
Trigger: TCTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCGAGGCCCGCTTAGCCTaGCCGGCTGCATGGATCAGA +
Preference number: 5 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPEARLA*PAAWIR
Trigger: TCTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTC...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCAAAGCTTGGCTTGTCCTaGGGGTGCTGCTCGGGCACA +
Preference number: 5 (lower is better)
Translates to: RPDSRLTAGEAADVCALPKLGLS*GCCSGT
Trigger: TGTGCCCGAGCAGCACCCCAAGGACAAGCCAAGCTT...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCCGCACGAAGCTTGGCTaGTCCTTGGGGTGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSRTKLG*SLGCCS
Trigger: CGAGCAGCACCCCAAGGACAAGCCAAGCTTCGTGCG...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS TCA 90 bp AGGCTTCCTCTGAGAGAGAGGTTGGCTGGACAAGGGTCACCCAGCTaGAGAGCAGCAGTAGCCCCACAGATAGGCCTGTCAGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: RLPLRERLAGQGSPS*RAAVAPQIGLSARG
Trigger: GCCCCTTGCTGACAGGCCTATCTGTGGGGCTACTGCTGCTCTTCAGCTGGGTGACCCTTGTCCAGCCAACCTCTCTCTCAGAGGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461266.5
CDS CCA 90 bp GCCATCAGGAAGGGGTGTGTAAACCAGCTTACCCTGCCGCCTCCCTaGGCAACCACAGTGCCTCGGTCCTCTACCTCTTCCACTAAAGCC +
Preference number: 5 (lower is better)
Translates to: AIRKGCVNQLTLPPP*ATTVPRSSTSSTKA
Trigger: GGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAGGCGGCAGGGTAAGCTGGTTTACACACCCCTTCCTGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS-3UTR CAA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCCATTTGAACAGCTCATaGCCCTCCTTCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPHLNSS*PSFRSC
Trigger: GCAGCTGCGGAAGGAGGGCAATGAGCTGTTCAAATG...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCATTTGAACAGCTCATaGCCCTCCTTCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFHLNSS*PSFRSC
Trigger: GCAGCTGCGGAAGGAGGGCAATGAGCTGTTCAAATG...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCCTGTTGTTGGGGTCCTaGAGAGACTTCCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPLLLGS*RDFRGT
Trigger: GGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAG...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TCCGTCTTCACCATGCACACCATGGCCGACACCACACCCGCTGCCAGCAGCTTCAGGGTGAGGCTGTTGTaGGGGTCCTTGAGAGACTTC +
Preference number: 5 (lower is better)
Translates to: SVFTMHTMADTTPAASSFRVRLL*GSLRDF
Trigger: GAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCT...GAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCACAGAGGGTGAGGCTGTaGTTGGGGTCCTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: RPDSRLTAGEAADVCALPQRVRL*LGSLRD
Trigger: GTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTG...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATCGCTCATGCGGCTGTTaGCGGTCACTGCGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADRSCGC*RSLRAP
Trigger: GGGAGCTCGCAGTGACCGCAAACAGCCGCATGAGCG...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCTCATGCGGCTGTTaGCGGTCACTGCGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSRSCGC*RSLRAP
Trigger: GGGAGCTCGCAGTGACCGCAAACAGCCGCATGAGCG...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CAGGACACCGTCTGGATGGCCCGTAGCTTCCCGGCCAGCCCTTGGCCCTCAAACCTCTCCGCATCACACTaGAGGTCATCAAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QDTVWMARSFPASPWPSNLSASH*RSSKSL
Trigger: CAAGCTCTTTGATGACCTCAAGTGTGATGCGGAGAG...GTTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCAGACGGTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTGAGGCCCGCTTAGCCTaGCCGGCTGCATGGATCAGA +
Preference number: 5 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVEARLA*PAAWIR
Trigger: TCTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTC...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGAAGCTTGGCTTGTCCTaGGGGTGCTGCTCGGGCACA +
Preference number: 5 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRKLGLS*GCCSGT
Trigger: TGTGCCCGAGCAGCACCCCAAGGACAAGCCAAGCTT...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCGCACGAAGCTTGGCTaGTCCTTGGGGTGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLRTKLG*SLGCCS
Trigger: CGAGCAGCACCCCAAGGACAAGCCAAGCTTCGTGCG...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGAGGTGATGGTGAGCTaGGCAAGGGCCTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADEVMVS*ARAWAA
Trigger: GGCAGCCCAGGCCCTTGCCAAGCTCACCATCACCTC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTAGGTCCTGCACCTCCTaGCTCATGGCCAAGTTACAC +
Preference number: 5 (lower is better)
Translates to: GEAADVCALPDAPGSTGCRSCTS*LMAKLH
Trigger: GTGTAACTTGGCCATGAGCAAGGAGGTGCAGGACCT...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCAGCTTCAGTCGGTCATaGCCCTGGGCTTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSSFSRS*PWASKR
Trigger: CCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGCT...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCCCAGTGTGTGGTCACTaGGGGAATGCGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSPVCGH*GNAAAE
Trigger: CTCTGCAGCCGCATTCCCCAAGTGACCACACACTGG...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGCTTGCTGAGGAGAATAGAGGCGCTCATGCGGCTGTTTGCGGTCACTGCGAGCCAGTGTGTGGTCACTaGGGGAATGCGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: ELAEENRGAHAAVCGHCEPVCGH*GNAAAE
Trigger: CTCTGCAGCCGCATTCCCCAAGTGACCACACACTGG...CTCGCAGTGACCGCAAACAGCCGCATGAGCGCCTCTATTCTCCTCAGCAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GGTGAGGCTGCTGATGTGTGCGCCCTTCCAGATGCCCCAGGATCCACAGGCTGTCCCTCACTCTCCATCTaGGTTGGGTTGGATAAGCCC +
Preference number: 5 (lower is better)
Translates to: GEAADVCALPDAPGSTGCPSLSI*VGLDKP
Trigger: GGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGG...ACAGCCTGTGGATCCTGGGGCATCTGGAAGGGCGCACACATCAGCAGCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGGATGGGCAAGAGTATaGGGCATGCCAGCCACCACC +
Preference number: 5 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRGWARV*GMPATT
Trigger: GGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCC...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CTCATAGATCCGCTCGCCAGGGAAGGTCATCTCCGGGTTGGAGGTGATGGTGAGGGATGGGCAAGAGTATaGGGCATGCCAGCCACCACC +
Preference number: 5 (lower is better)
Translates to: LIDPLAREGHLRVGGDGEGWARV*GMPATT
Trigger: GGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCC...CTCACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS TCA 90 bp GACAGTGTCCCCAGGCTGACGGCAGGAACCACAGAGCTACCCTGCTaGGCTGGAACAGAGCTTTCAGAGCAGCCGCATCCTCCACAAACT +
Preference number: 5 (lower is better)
Translates to: DSVPRLTAGTTELPC*AGTELSEQPHPPQT
Trigger: AGTTTGTGGAGGATGCGGCTGCTCTGAAAGCTCTGTTCCAGCTCAGCAGGGTAGCTCTGTGGTTCCTGCCGTCAGCCTGGGGACACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487875.5
ENST00000556704.1
CDS TCA 90 bp GGCGGCCCAGCTTCTCTAGGGCTTGGCTCCGCCGGTAGAGTGCTTTaGCATCCCCACCATCCTTTTCAATGGCTGAGCACAAACAGGAGC +
Preference number: 5 (lower is better)
Translates to: GGPASLGLGSAGRVL*HPHHPFQWLSTNRS
Trigger: GCTCCTGTTTGTGCTCAGCCATTGAAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGCCAAGCCCTAGAGAAGCTGGGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486253.1
ENST00000495068.5
ENST00000497152.6
ENST00000557212.5
CDS CCA 90 bp AGTAGCCCCACAGATAGGCCTGTCAGCAAGGGGCCTGACCTTCTCTaGATGCCCATGAGAGTTCACTACCACCTCTGTCCTGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SSPTDRPVSKGPDLL*MPMRVHYHLCPGPG
Trigger: CCCAGGACCAGGACAGAGGTGGTAGTGAACTCTCATGGGCATCCAGAGAAGGTCAGGCCCCTTGCTGACAGGCCTATCTGTGGGGCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394275.7
ENST00000461266.5
ENST00000480470.5
ENST00000672480.1
CDS CCA 90 bp TGTCCCCAGGCTGACGGCAGGAACCACAGAGCTACCCTGCTGAGCTaGAACAGAGCTTTCAGAGCAGCCGCATCCTCCACAAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: CPQADGRNHRATLLS*NRAFRAAASSTNSS
Trigger: GGAAGAGTTTGTGGAGGATGCGGCTGCTCTGAAAGCTCTGTTCCAGCTCAGCAGGGTAGCTCTGTGGTTCCTGCCGTCAGCCTGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487875.5
ENST00000556704.1
CDS-3UTR CAA 90 bp GAGCAAATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCCCAGTATGCTCAGGGTaGCCACTGTCCGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: EQMPTSVRRAASMRSVSPPVCSG*PLSVTD
Trigger: ATCAGTCACGGACAGTGGCAACCCTGAGCATACTGG...GGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCATTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCAGGGTGAGGCTGTTGTaGGGGTCCTTGAGAGACTTC +
Preference number: 5 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSRVRLL*GSLRDF
Trigger: GAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCT...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGCTTGCTGAGGAGAATAGAGGCGCTCATGCGGCTGTTTGCGGTCACTGCGAGCAGAGGGTGAGGCTGTaGTTGGGGTCCTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: ELAEENRGAHAAVCGHCEQRVRL*LGSLRD
Trigger: GTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTG...CTCGCAGTGACCGCAAACAGCCGCATGAGCGCCTCTATTCTCCTCAGCAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGCAAATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCGCGTCGATCTGGTCATaGCACAGCCACTTTCGACAC +
Preference number: 5 (lower is better)
Translates to: EQMPTSVRRAASMRSVSPASIWS*HSHFRH
Trigger: GTGTCGAAAGTGGCTGTGCAATGACCAGATCGACGC...GGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCATTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGAGCCCGCACGAAGCTaGGCTTGTCCTTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSEPARS*ACPWGA
Trigger: AGCACCCCAAGGACAAGCCAAGCTTCGTGCGGGCTC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTAGGTCCTGCACCTCCTaGCTCATGGCCAAGTTACAC +
Preference number: 5 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTRSCTS*LMAKLH
Trigger: GTGTAACTTGGCCATGAGCAAGGAGGTGCAGGACCT...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCACCATATTCCACTGCTTaGTCCAGGCAGGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: RPDSRLTAGEAADVCALPPYSTA*SRQAAA
Trigger: TGCTGCAGCCTGCCTGGACAAAGCAGTGGAATATGG...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS TCA 90 bp CAGATAGGCCTGTCAGCAAGGGGCCTGACCTTCTCTGGATGCCCATaGGAGTTCACTACCACCTCTGTCCTGGTCCTGGGAACCCCAACA +
Preference number: 5 (lower is better)
Translates to: QIGLSARGLTFSGCP*EFTTTSVLVLGTPT
Trigger: TGTTGGGGTTCCCAGGACCAGGACAGAGGTGGTAGTGAACTCTCATGGGCATCCAGAGAAGGTCAGGCCCCTTGCTGACAGGCCTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394275.7
ENST00000461266.5
ENST00000480470.5
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCCTCGCCCTTCCGCATaGCGGGTTACTTCGGTTGTT +
Preference number: 5 (lower is better)
Translates to: EYWACQPPPAKAASVLTLPRPSA*RVTSVV
Trigger: AACAACCGAAGTAACCCGCAATGCGGAAGGGCGAGG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGCCAGTATGCTCAGGGTaGCCACTGTCCGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRPVCSG*PLSVTD
Trigger: ATCAGTCACGGACAGTGGCAACCCTGAGCATACTGG...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCAGGGTGAGGCTGTTGTaGGGGTCCTTGAGAGACTTC +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSRVRLL*GSLRDF
Trigger: GAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCT...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCTCTCCGCATCACACTaGAGGTCATCAAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFLSASH*RSSKSL
Trigger: CAAGCTCTTTGATGACCTCAAGTGTGATGCGGAGAG...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGGACAACCCCCTCTCCGCATCACACTaGAGGTCATCAAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LRATIGSVCMSLGPRDNPLSASH*RSSKSL
Trigger: CAAGCTCTTTGATGACCTCAAGTGTGATGCGGAGAG...GGGGTTGTCCCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGCGCACGAAGCTTGGCTaGTCCTTGGGGTGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVRTKLG*SLGCCS
Trigger: CGAGCAGCACCCCAAGGACAAGCCAAGCTTCGTGCG...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGAGCTTCAGTCGGTCATaGCCCTGGGCTTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LVDDPEGEAVVGVLERLPSFSRS*PWASKR
Trigger: CCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGCT...CGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS TCA 90 bp CCGCCGGTAGAGTGCTTTGACATCCCCACCATCCTTTTCAATGGCTaGGCACAAACAGGAGCGCTGTCAGCACCCATGAGGCCACTGTCT +
Preference number: 5 (lower is better)
Translates to: PPVECFDIPTILFNG*AQTGALSAPMRPLS
Trigger: AGACAGTGGCCTCATGGGTGCTGACAGCGCTCCTGTTTGTGCTCAGCCATTGAAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486253.1
ENST00000495068.5
ENST00000497152.6
ENST00000557212.5
CDS CCA 90 bp GTGGATGGATGGATGGACGGGCAGATGGGCGGATGGACAGATGGGTaGATGGAGGAATGGATGGACAGACAGACAAAGGGACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: VDGWMDGQMGGWTDG*MEEWMDRQTKGLKL
Trigger: CAGCTTCAGTCCCTTTGTCTGTCTGTCCATCCATTCCTCCATCCACCCATCTGTCCATCCGCCCATCTGCCCGTCCATCCATCCATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486253.1
CDS-3UTR CAA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTAACATCTGTTCCACTTaGGCATCCGTCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTNICST*ASVEDM
Trigger: CATGTCCTCGACGGATGCCAAAGTGGAACAGATGTT...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp ATGCCAACCAGCGTACGCAGAGCCGCCAGCATGAGGTCAGTCTCTCCCATGTCCAACATCTGTTCCACTTaGGCATCCGTCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: MPTSVRRAASMRSVSPMSNICST*ASVEDM
Trigger: CATGTCCTCGACGGATGCCAAAGTGGAACAGATGTT...GGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCCAGTATGCTCAGGGTaGCCACTGTCCGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: EYWACQPPPAKAASVLTLPVCSG*PLSVTD
Trigger: ATCAGTCACGGACAGTGGCAACCCTGAGCATACTGG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCCACTGCTTAGCCAGTTaGAGAGTGGAGCCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSHCLAS*RVEPSA
Trigger: TGCTGAAGGCTCCACTCTCAAACTGGCTAAGCAGTG...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGGCGTCGATCTGGTCATaGCACAGCCACTTTCGACAC +
Preference number: 5 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLASIWS*HSHFRH
Trigger: GTGTCGAAAGTGGCTGTGCAATGACCAGATCGACGC...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATAGCTTCAGTCGGTCATaGCCCTGGGCTTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADSFSRS*PWASKR
Trigger: CCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGCT...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGCCAGTGTGTGGTCACTaGGGGAATGCGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVPVCGH*GNAAAE
Trigger: CTCTGCAGCCGCATTCCCCAAGTGACCACACACTGG...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCATTGCCCTGGGCTTCGAAGAGGTCCTGCACCTCCTTGCTCATGGCCAAGTTCCATATTCCACTGCTTaGTCCAGGCAGGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VIALGFEEVLHLLAHGQVPYSTA*SRQAAA
Trigger: TGCTGCAGCCTGCCTGGACAAAGCAGTGGAATATGG...AACTTGGCCATGAGCAAGGAGGTGCAGGACCTCTTCGAAGCCCAGGGCAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCCCTCACTCTCCATCTaGGTTGGGTTGGATAAGCCC +
Preference number: 5 (lower is better)
Translates to: EYWACQPPPAKAASVLTLPSLSI*VGLDKP
Trigger: GGGCTTATCCAACCCAACCAAGATGGAGAGTGAGGG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS TCA 90 bp CTGTTTCCTTCCATGTCGCACAAAGAAGCCCTCTGCAGGTGGAGTTaGGAGGCATGTGGGGAGAGGACAGGTGCTTCAGCCACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LFPSMSHKEALCRWS*EACGERTGASATAK
Trigger: TTTGGCTGTGGCTGAAGCACCTGTCCTCTCCCCACATGCCTCTCAACTCCACCTGCAGAGGGCTTCTTTGTGCGACATGGAAGGAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS-3UTR CAA 90 bp GCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCTGGAAAACTTTGTTCTaGGGCTCCAAGCTCACACAT +
Preference number: 5 (lower is better)
Translates to: AGLIAGSQLVRLLMCAPFWKTLF*GSKLTH
Trigger: ATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCA...GAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCGCCTCCTGGAAAACTTaGTTCTTGGGCTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: EYWACQPPPAKAASVLTLASWKT*FLGSKL
Trigger: GAGCTTGGAGCCCAAGAACAAAGTTTTCCAGGAGGC...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCTGACTAATCTTTTTCAGACCTaGGTCGATGACCCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: APGSTGCVGMHLPHSQLTNLFQT*VDDPEG
Trigger: ACCCTCTGGGTCATCGACCAAGGTCTGAAAAAGATT...AGTCAGCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CAGATGCCCCAGGATCCACAGGCTGTGTTGGGATGCACCTTCCCCATTCCCAGCAATCTTTTTCAGACCTaGGTCGATGACCCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: QMPQDPQAVLGCTFPIPSNLFQT*VDDPEG
Trigger: ACCCTCTGGGTCATCGACCAAGGTCTGAAAAAGATT...GCTGGGAATGGGGAAGGTGCATCCCAACACAGCCTGTGGATCCTGGGGCATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCGTCGATCTGGTCATaGCACAGCCACTTTCGACAC +
Preference number: 5 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADASIWS*HSHFRH
Trigger: GTGTCGAAAGTGGCTGTGCAATGACCAGATCGACGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCATATTCCACTGCTTaGTCCAGGCAGGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSPYSTA*SRQAAA
Trigger: TGCTGCAGCCTGCCTGGACAAAGCAGTGGAATATGG...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS TCA 90 bp ACACCCAGCTCTGGCGTGGCAGCTGCTGAGTCATGTTTTATAGGCTaGTGGCTCAGCCATCAGGAAGGGGTGTGTAAACCAGCTTACCCT +
Preference number: 5 (lower is better)
Translates to: TPSSGVAAAESCFIG*WLSHQEGVCKPAYP
Trigger: AGGGTAAGCTGGTTTACACACCCCTTCCTGATGGCTGAGCCATCAGCCTATAAAACATGACTCAGCAGCTGCCACGCCAGAGCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS TCA 90 bp TCCTTTTCAATGGCTGAGCACAAACAGGAGCGCTGTCAGCACCCATaGGGCCACTGTCTCCAGGCAAGAGCAGTAGGGAAAGATCTCGAG +
Preference number: 5 (lower is better)
Translates to: SFSMAEHKQERCQHP*GHCLQARAVGKDLE
Trigger: CTCGAGATCTTTCCCTACTGCTCTTGCCTGGAGACAGTGGCCTCATGGGTGCTGACAGCGCTCCTGTTTGTGCTCAGCCATTGAAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486253.1
ENST00000495068.5
ENST00000497152.6
ENST00000557212.5
CDS TCA 90 bp ACAACAAGAAGACATCAGTGGGCTCCACAGCAGCCCAGCCCAGTTTaGCCCTTCAACTTCTCCAACAAACCAGGGAGACACAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: TTRRHQWAPQQPSPV*PFNFSNKPGRHREG
Trigger: CCCTTCCCTGTGTCTCCCTGGTTTGTTGGAGAAGTTGAAGGGTCAAACTGGGCTGGGCTGCTGTGGAGCCCACTGATGTCTTCTTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556704.1
ENST00000557212.5
CDS CCA 90 bp CCTTGGGTACAGGATGAATTCGGGAAACTCCCAGGCCCCAGACTTTaGGAGCTTACAAACTTGACCTCCCCAGCTCCTCCAAGAAGAACG +
Preference number: 5 (lower is better)
Translates to: PWVQDEFGKLPGPRL*ELTNLTSPAPPRRT
Trigger: CGTTCTTCTTGGAGGAGCTGGGGAGGTCAAGTTTGTAAGCTCCCAAAGTCTGGGGCCTGGGAGTTTCCCGAATTCATCCTGTACCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487875.5
ENST00000556704.1
CDS CCA 90 bp TCTTATGCAGGATGGTCAGAACATCGAGTCCAGGAATACTTCGAGTaGGCAGCGCAGGTGGTGAAGGGGCTTCAGGGAACAAACCGGCAA +
Preference number: 5 (lower is better)
Translates to: SYAGWSEHRVQEYFE*AAQVVKGLQGTNRQ
Trigger: TTGCCGGTTTGTTCCCTGAAGCCCCTTCACCACCTGCGCTGCCCACTCGAAGTATTCCTGGACTCGATGTTCTGACCATCCTGCATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556319.1
CDS-3UTR CAA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGGAAGAGCGGACAGATaGACTTGGTACAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVGRADR*TWYRAS
Trigger: TGAGGCCCTGTACCAAGTCAATCTGTCCGCTCTTCC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CAA 90 bp AGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGTGTGCGCCCTTCCATCCTTTTCAATGGCTTaGGATGCCTCTGTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: RPDSRLTAGEAADVCALPSFSMA*DASVSA
Trigger: AGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGGA...TGGAAGGGCGCACACATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATGCCTCCTGGAAAACTTaGTTCTTGGGCTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADASWKT*FLGSKL
Trigger: GAGCTTGGAGCCCAAGAACAAAGTTTTCCAGGAGGC...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCAACATCTGTTCCACTTaGGCATCCGTCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: EYWACQPPPAKAASVLTLNICST*ASVEDM
Trigger: CATGTCCTCGACGGATGCCAAAGTGGAACAGATGTT...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCAATCTTTTTCAGACCTaGGTCGATGACCCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSNLFQT*VDDPEG
Trigger: ACCCTCTGGGTCATCGACCAAGGTCTGAAAAAGATT...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGCTGATCACTGCTTAGCCAGTTaGAGAGTGGAGCCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: FYWRGRPDSRLTAGEAADHCLAS*RVEPSA
Trigger: TGCTGAAGGCTCCACTCTCAAACTGGCTAAGCAGTG...ATCAGCAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGTCCTGCACCTCCTaGCTCATGGCCAAGTTACAC +
Preference number: 5 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVRSCTS*LMAKLH
Trigger: GTGTAACTTGGCCATGAGCAAGGAGGTGCAGGACCT...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTCCATCTTGGTTGGGTaGGATAAGCCCATATTCCAC +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSSILVG*DKPIFH
Trigger: GTGGAATATGGGCTTATCCAACCCAACCAAGATGGA...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp TGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTTGAGAGACTTCCGGTCCATCTTGGTTGGGTaGGATAAGCCCATATTCCAC +
Preference number: 5 (lower is better)
Translates to: WSMTQRVRLLLGSLRDFRSILVG*DKPIFH
Trigger: GTGGAATATGGGCTTATCCAACCCAACCAAGATGGA...CCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS CCA 90 bp GCTTGCCTGCTTCCGCGTCACTCTCTCAGCGGGACGGTGTTCCTCTaGCCATTAATGTTTTTCTGTTCCATATCTAACACCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ACLLPRHSLSGTVFL*PLMFFCSISNTQLW
Trigger: CCAGAGCTGGGTGTTAGATATGGAACAGAAAAACATTAATGGCCAGAGGAACACCGTCCCGCTGAGAGAGTGACGCGGAAGCAGGCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS-3UTR CAA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTAGCGGACAGATTGACTaGGTACAGGGCCTCAAATTC +
Preference number: 5 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSSGQID*VQGLKF
Trigger: GAATTTGAGGCCCTGTACCAAGTCAATCTGTCCGCT...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394275.7
ENST00000672480.1
CDS-3UTR CAA 90 bp TCCGTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCTCCTTTTCAATGGCTTaGGATGCCTCTGTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SVLTLRATIGSVCMSLGPSFSMA*DASVSA
Trigger: AGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGGA...GGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTCCTTACTCTCCGTGCCACAATAGGTAGCGTGTGCATGAGCCTTGGGCCCAGGTCCTTTTCAATGGCTTaGGATGCCTCTGTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: VLTLRATIGSVCMSLGPRSFSMA*DASVSA
Trigger: AGCAGAAACAGAGGCATCCAAAGCCATTGAAAAGGA...CCTGGGCCCAAGGCTCATGCACACGCTACCTATTGTGGCACGGAGAGTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGCAAGCGAGGATGGGCAAGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGGAAAACTTTGTTCTaGGGCTCCAAGCTCACACAT +
Preference number: 5 (lower is better)
Translates to: SKRGWARVLGMPATTSQSWKTLF*GSKLTH
Trigger: ATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCA...GCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCTTGCCCATCCTCGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGTCCATCTTGGTTGGGTaGGATAAGCCCATATTCCAC +
Preference number: 5 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLSILVG*DKPIFH
Trigger: GTGGAATATGGGCTTATCCAACCCAACCAAGATGGA...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTCCACTCTCCATCTTGGTaGGGTTGGATAAGCCCATAT +
Preference number: 5 (lower is better)
Translates to: EYWACQPPPAKAASVLTLHSPSW*GWISPY
Trigger: ATATGGGCTTATCCAACCCAACCAAGATGGAGAGTG...GAGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS TCA 90 bp GAAGAGGCTCTAAAGCATCTGTTCAAGCAGCGGGGGCTGACAATCTaGTCAGTGCTTGAAGCTATCCAGAGGCACAACTCCAGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: EEALKHLFKQRGLTI*SVLEAIQRHNSSLV
Trigger: AACGAGGCTGGAGTTGTGCCTCTGGATAGCTTCAAGCACTGATCAGATTGTCAGCCCCCGCTGCTTGAACAGATGCTTTAGAGCCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556319.1
CDS CCA 90 bp CAGACCCTCTGCATCCAAACACTTCCTGAAACACCTAATAAGGGCTaGACATGGATTGTGCTGAGCACCAGGGCCATGGGGGTAAATGAG +
Preference number: 5 (lower is better)
Translates to: QTLCIQTLPETPNKG*TWIVLSTRAMGVNE
Trigger: CTCATTTACCCCCATGGCCCTGGTGCTCAGCACAATCCATGTCCAGCCCTTATTAGGTGTTTCAGGAAGTGTTTGGATGCAGAGGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS-3UTR CAA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGTGGAAAACTTTGTTCTaGGGCTCCAAGCTCACACAT +
Preference number: 5 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLWKTLF*GSKLTH
Trigger: ATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCA...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTGTTCTGAGAAGCCTTTaGCTTTTTCTCAGTGCCCTT +
Preference number: 5 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSVLRSL*LFLSAL
Trigger: AAGGGCACTGAGAAAAAGCAAAAGGCTTCTCAGAAC...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CCCACCTCTGTCAGCAGATCTAAGAGGTTACTGATGAGGACCTTCAGCTCCCGGGTTCTGAGAAGCCTTTaGCTTTTTCTCAGTGCCCTT +
Preference number: 5 (lower is better)
Translates to: PTSVSRSKRLLMRTFSSRVLRSL*LFLSAL
Trigger: AAGGGCACTGAGAAAAAGCAAAAGGCTTCTCAGAAC...CCGGGAGCTGAAGGTCCTCATCAGTAACCTCTTAGATCTGCTGACAGAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp CACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGAGGCTGTTTTTGACACCTTCCTaGAGGGCATCAAACATAACC +
Preference number: 5 (lower is better)
Translates to: HTFIGGAGLIAGSQLVRLFLTPS*RASNIT
Trigger: GGTTATGTTTGATGCCCTCAAGGAAGGTGTCAAAAA...CAGCCTCACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGCACTCTCCATCTTGGTaGGGTTGGATAAGCCCATAT +
Preference number: 5 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVHSPSW*GWISPY
Trigger: ATATGGGCTTATCCAACCCAACCAAGATGGAGAGTG...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp CATCCTCCACAAACTCTTCCTTCACGTCGGCATCAAAGGTCAGGTAAGCCAGGCCACTCTCCATCTTGGTaGGGTTGGATAAGCCCATAT +
Preference number: 5 (lower is better)
Translates to: HPPQTLPSRRHQRSGKPGHSPSW*GWISPY
Trigger: ATATGGGCTTATCCAACCCAACCAAGATGGAGAGTG...GCCTGGCTTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS CCA 90 bp CTCTGCATCCAAACACTTCCTGAAACACCTAATAAGGGCTGGACATaGATTGTGCTGAGCACCAGGGCCATGGGGGTAAATGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: LCIQTLPETPNKGWT*IVLSTRAMGVNETK
Trigger: CTTTGTCTCATTTACCCCCATGGCCCTGGTGCTCAGCACAATCCATGTCCAGCCCTTATTAGGTGTTTCAGGAAGTGTTTGGATGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS-3UTR CAA 90 bp GTTCTACACACTTTTATTGGAGGGGCAGGCCTGATAGCAGGCTCACAGCTGGTGGTTCTGAGAAGCCTTTaGCTTTTTCTCAGTGCCCTT +
Preference number: 5 (lower is better)
Translates to: VLHTFIGGAGLIAGSQLVVLRSL*LFLSAL
Trigger: AAGGGCACTGAGAAAAAGCAAAAGGCTTCTCAGAAC...CACCAGCTGTGAGCCTGCTATCAGGCCTGCCCCTCCAATAAAAGTGTGTAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp AGAGTATTGGGCATGCCAGCCACCACCAGCCAAAGCTGCTTCCGTCCTTACTCTTTTTTGACACCTTCCTaGAGGGCATCAAACATAACC +
Preference number: 5 (lower is better)
Translates to: RVLGMPATTSQSCFRPYSFLTPS*RASNIT
Trigger: GGTTATGTTTGATGCCCTCAAGGAAGGTGTCAAAAA...AGAGTAAGGACGGAAGCAGCTTTGGCTGGTGGTGGCTGGCATGCCCAATACTCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000394275.7
ENST00000418476.2
ENST00000672480.1
CDS-3UTR CAA 90 bp GTTACTGATGAGGACCTTCAGCTCCCGGGCAGGATCCACAATGATGGCACCTTCTTTTTGACACCTTCCTaGAGGGCATCAAACATAACC +
Preference number: 5 (lower is better)
Translates to: VTDEDLQLPGRIHNDGTFFLTPS*RASNIT
Trigger: GGTTATGTTTGATGCCCTCAAGGAAGGTGTCAAAAA...GAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATCAGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS-3UTR CAA 90 bp TCTCTTCTGGGTCCAACAGTATCTGAAACATCTGTTCCACTTTGGCATCCGTCGCACTGCTTAGCCAGTTaGAGAGTGGAGCCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: SLLGPTVSETSVPLWHPSHCLAS*RVEPSA
Trigger: TGCTGAAGGCTCCACTCTCAAACTGGCTAAGCAGTG...CGACGGATGCCAAAGTGGAACAGATGTTTCAGATACTGTTGGACCCAGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS GCA 90 bp AGTGCTTTCCTTGACATCACGCTAGCAAGTTTCTGTCGACTCTTATaGAGGATGGTCAGAACATCGAGTCCAGGAATACTTCGAGTGGGC +
Preference number: 5 (lower is better)
Translates to: SAFLDITLASFCRLL*RMVRTSSPGILRVG
Trigger: GCCCACTCGAAGTATTCCTGGACTCGATGTTCTGACCATCCTGCATAAGAGTCGACAGAAACTTGCTAGCGTGATGTCAAGGAAAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556319.1
CDS-3UTR CAA 90 bp TCTCTTCTGGGTCCAACAGTATCTGAAACATCTGTTCCACTTTGGCATCCGTCGAGCGGACAGATTGACTaGGTACAGGGCCTCAAATTC +
Preference number: 5 (lower is better)
Translates to: SLLGPTVSETSVPLWHPSSGQID*VQGLKF
Trigger: GAATTTGAGGCCCTGTACCAAGTCAATCTGTCCGCT...CGACGGATGCCAAAGTGGAACAGATGTTTCAGATACTGTTGGACCCAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672480.1
CDS CCA 72 bp GGCCGCATGACACAGCATCTGCAGACACTGATGCGCTaGCCGCTGGACAGTCGTGGGCCCCACCCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: GRMTQHLQTLMR*PLDSRGPHPFP
Trigger: TGGGAAGGGGTGGGGCCCACGACTGTCCAGCGGCCAGCGCATCAGTGTCTGCAGATGCTGTGTCATGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS GCA 72 bp CACAGGCACCAGTGTGGAGGGGCCAAGGAGCTTGCCTaGTTCCGCGTCACTCTCTCAGCGGGACGGTGTTCC +
Preference number: 6 (lower is better)
Translates to: HRHQCGGAKELA*FRVTLSAGRCS
Trigger: GGAACACCGTCCCGCTGAGAGAGTGACGCGGAAGCAGGCAAGCTCCTTGGCCCCTCCACACTGGTGCCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS GCA 72 bp CCTTCACAGGCACCAGTGTGGAGGGGCCAAGGAGCTTaGCTGCTTCCGCGTCACTCTCTCAGCGGGACGGTG +
Preference number: 6 (lower is better)
Translates to: PSQAPVWRGQGA*LLPRHSLSGTV
Trigger: CACCGTCCCGCTGAGAGAGTGACGCGGAAGCAGGCAAGCTCCTTGGCCCCTCCACACTGGTGCCTGTGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS GCA 72 bp CTCCAGCCCAGACTCCGGCCCCGACCGCAGCAGAAGTaGACGAGGTCTACGGTCATCAGGGTCACAACCAGT +
Preference number: 6 (lower is better)
Translates to: LQPRLRPRPQQK*TRSTVIRVTTS
Trigger: ACTGGTTGTGACCCTGATGACCGTAGACCTCGTGCACTTCTGCTGCGGTCGGGGCCGGAGTCTGGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394275.7
ENST00000461266.5
ENST00000639885.1
ENST00000672480.1
CDS CAA 72 bp CCCCTGAGGATGGGCGGGGGCGGAAGAGCGGACAGATaGACTTGGTACAGGGCCTCAAATTCAGCCCGGGTG +
Preference number: 6 (lower is better)
Translates to: PLRMGGGGRADR*TWYRASNSARV
Trigger: CACCCGGGCTGAATTTGAGGCCCTGTACCAAGTCAATCTGTCCGCTCTTCCGCCCCCGCCCATCCTCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394275.7
ENST00000461266.5
ENST00000480470.5
ENST00000639885.1
ENST00000672480.1
CDS CAA 72 bp ACCTTCACAGGCACCAGTGTGGAGGGGCCAAGGAGCTaGCCTGCTTCCGCGTCACTCTCTCAGCGGGACGGT +
Preference number: 6 (lower is better)
Translates to: TFTGTSVEGPRS*PASASLSQRDG
Trigger: ACCGTCCCGCTGAGAGAGTGACGCGGAAGCAGGCAAGCTCCTTGGCCCCTCCACACTGGTGCCTGTGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS CAA 90 bp GAGCCTAGGACCTTCACAGGCACCAGTGTGGAGGGGCCAAGGAGCTaGCCTGCTTCCGCGTCACTCTCTCAGCGGGACGGTGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: EPRTFTGTSVEGPRS*PASASLSQRDGVPL
Trigger: CAGAGGAACACCGTCCCGCTGAGAGAGTGACGCGGAAGCAGGCAAGCTCCTTGGCCCCTCCACACTGGTGCCTGTGAAGGTCCTAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS GCA 72 bp GAGGAGAATGTGACGGTGCAGCGGTCCCAGAGTCCTTaGCCACCACAGAAGCCCTACAGCTCCACACCAGGG +
Preference number: 6 (lower is better)
Translates to: EENVTVQRSQSP*PPQKPYSSTPG
Trigger: CCCTGGTGTGGAGCTGTAGGGCTTCTGTGGTGGGCAAGGACTCTGGGACCGCTGCACCGTCACATTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486253.1
ENST00000497152.6
CDS CCA 72 bp GCTCATTGCCCTCCTTCCGCAGCTGCTCCACTGAGCTaGCCTGTAGAGAGAAAGGGGGCGGAAACGTCGGAG +
Preference number: 6 (lower is better)
Translates to: AHCPPSAAAPLS*PVERKGAETSE
Trigger: CTCCGACGTTTCCGCCCCCTTTCTCTCTACAGGCCAGCTCAGTGGAGCAGCTGCGGAAGGAGGGCAATGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556482.1
CDS CAA 72 bp GAGGATGGGCGGGGGCGGAAGAGCGGACAGATTGACTaGGTACAGGGCCTCAAATTCAGCCCGGGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: EDGRGRKSGQID*VQGLKFSPGAA
Trigger: TGCTGCACCCGGGCTGAATTTGAGGCCCTGTACCAAGTCAATCTGTCCGCTCTTCCGCCCCCGCCCATCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394275.7
ENST00000461266.5
ENST00000480470.5
ENST00000639885.1
ENST00000672480.1
CDS CAA 72 bp GGAGGAGAATGTGACGGTGCAGCGGTCCCAGAGTCCTaGCCCACCACAGAAGCCCTACAGCTCCACACCAGG +
Preference number: 6 (lower is better)
Translates to: GGECDGAAVPES*PTTEALQLHTR
Trigger: CCTGGTGTGGAGCTGTAGGGCTTCTGTGGTGGGCAAGGACTCTGGGACCGCTGCACCGTCACATTCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486253.1
ENST00000497152.6
CDS TCA 72 bp CCCAGGCTGACGGCAGGAACCACAGAGCTACCCTGCTaGGCTGGAACAGAGCTTTCAGAGCAGCCGCATCCT +
Preference number: 6 (lower is better)
Translates to: PRLTAGTTELPC*AGTELSEQPHP
Trigger: AGGATGCGGCTGCTCTGAAAGCTCTGTTCCAGCTCAGCAGGGTAGCTCTGTGGTTCCTGCCGTCAGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487875.5
ENST00000556704.1
CDS CAA 90 bp GCTGCTCCTCCTCCTTGGTCGATGACCCAGAGGGTGAGGCTGTTGTaGGGGTCCTTGAGAGACTTCCGGGGCACCGCTTTAATCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AAPPPWSMTQRVRLL*GSLRDFRGTALIRR
Trigger: CCTCCTGATTAAAGCGGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAAGGAGGAGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556704.1
CDS GCA 72 bp ACCAGCTTACCCTGCCGCCTCCCTGGGCAACCACAGTaGCTCGGTCCTCTACCTCTTCCACTAAAGCCAAGA +
Preference number: 6 (lower is better)
Translates to: TSLPCRLPGQPQ*LGPLPLPLKPR
Trigger: TCTTGGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAGGCGGCAGGGTAAGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS CAA 90 bp CTACCTTGGTCGATGACCCAGAGGGTGAGGCTGTTGTTGGGGTCCTaGAGAGACTTCCGGGGCACCGCTTTAATCAGGAGGGTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LPWSMTQRVRLLLGS*RDFRGTALIRRVRA
Trigger: TGCCCTGACCCTCCTGATTAAAGCGGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAAGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557212.5
CDS TCA 72 bp CTGTCAGCAAGGGGCCTGACCTTCTCTGGATGCCCATaGGAGTTCACTACCACCTCTGTCCTGGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: LSARGLTFSGCP*EFTTTSVLVLG
Trigger: TCCCAGGACCAGGACAGAGGTGGTAGTGAACTCTCATGGGCATCCAGAGAAGGTCAGGCCCCTTGCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394275.7
ENST00000461266.5
ENST00000480470.5
ENST00000672480.1
CDS GCA 72 bp CCACATTTGAACAGCTCATTGCCCTCCTTCCGCAGCTaGTCCACTGAGCTGGCCTGTAGAGAGAAAGGGGGC +
Preference number: 6 (lower is better)
Translates to: PHLNSSLPSFRS*STELACREKGG
Trigger: GCCCCCTTTCTCTCTACAGGCCAGCTCAGTGGAGCAGCTGCGGAAGGAGGGCAATGAGCTGTTCAAATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556482.1
CDS GCA 72 bp AGGCCCACCGTCTCACCACTAGCGCCCGGATGCGGATaGTGTCCTTCTCGCTGCACTTATATAGGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: RPTVSPLAPGCG*CPSRCTYIGPS
Trigger: TGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCATCCGCATCCGGGCGCTAGTGGTGAGACGGTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554481.1
CDS CAA 72 bp CTACCTTGGTCGATGACCCAGAGGGTGAGGCTGTTGTaGGGGTCCTTGAGAGACTTCCGGGGCACCGCTTTA +
Preference number: 6 (lower is better)
Translates to: LPWSMTQRVRLL*GSLRDFRGTAL
Trigger: TAAAGCGGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCAAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557212.5
CDS TCA 72 bp CAATTCCACCCTCAGCTGGGACCCTTGGGTACAGGATaGATTCGGGAAACTCCCAGGCCCCAGACTTTGGGA +
Preference number: 6 (lower is better)
Translates to: QFHPQLGPLGTG*IRETPRPQTLG
Trigger: TCCCAAAGTCTGGGGCCTGGGAGTTTCCCGAATTCATCCTGTACCCAAGGGTCCCAGCTGAGGGTGGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS GCA 72 bp CTCACCTTCCTCCCTCTCCCCAGGCTTGACTCCCTGTaGAGACCCTCTGCATCCAAACACTTCCTGAAACAC +
Preference number: 6 (lower is better)
Translates to: LTFLPLPRLDSL*RPSASKHFLKH
Trigger: GTGTTTCAGGAAGTGTTTGGATGCAGAGGGTCTGCACAGGGAGTCAAGCCTGGGGAGAGGGAGGAAGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS CCA 72 bp GGATGGTCAGAACATCGAGTCCAGGAATACTTCGAGTaGGCAGCGCAGGTGGTGAAGGGGCTTCAGGGAACA +
Preference number: 6 (lower is better)
Translates to: GWSEHRVQEYFE*AAQVVKGLQGT
Trigger: TGTTCCCTGAAGCCCCTTCACCACCTGCGCTGCCCACTCGAAGTATTCCTGGACTCGATGTTCTGACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556319.1
CDS CAA 90 bp TCTGTTTCCTTCCATGTCGCACAAAGAAGCCCTCTGCAGGTGGAGTaGAGAGGCATGTGGGGAGAGGACAGGTGCTTCAGCCACAGCCAA +
Preference number: 6 (lower is better)
Translates to: SVSFHVAQRSPLQVE*RGMWGEDRCFSHSQ
Trigger: TTGGCTGTGGCTGAAGCACCTGTCCTCTCCCCACATGCCTCTCAACTCCACCTGCAGAGGGCTTCTTTGTGCGACATGGAAGGAAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS TCA 72 bp ACAGCCAAATCCTTATGGGATGGAGAAATCCAGGACTaGGTGCCCCAGGGAGGAAGACCAGCTTCCACAGGG +
Preference number: 6 (lower is better)
Translates to: TAKSLWDGEIQD*VPQGGRPASTG
Trigger: CCCTGTGGAAGCTGGTCTTCCTCCCTGGGGCACTCAGTCCTGGATTTCTCCATCCCATAAGGATTTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS TCA 72 bp GCTTCTCTAGGGCTTGGCTCCGCCGGTAGAGTGCTTTaGCATCCCCACCATCCTTTTCAATGGCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: ASLGLGSAGRVL*HPHHPFQWLST
Trigger: TGTGCTCAGCCATTGAAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGCCAAGCCCTAGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486253.1
ENST00000495068.5
ENST00000497152.6
ENST00000557212.5
CDS GCA 72 bp CCAAATCCTTATGGGATGGAGAAATCCAGGACTGAGTaGCCCAGGGAGGAAGACCAGCTTCCACAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: PNPYGMEKSRTE*PREEDQLPQGA
Trigger: TGCACCCTGTGGAAGCTGGTCTTCCTCCCTGGGGCACTCAGTCCTGGATTTCTCCATCCCATAAGGATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS CCA 72 bp ACAGATAGGCCTGTCAGCAAGGGGCCTGACCTTCTCTaGATGCCCATGAGAGTTCACTACCACCTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: TDRPVSKGPDLL*MPMRVHYHLCP
Trigger: AGGACAGAGGTGGTAGTGAACTCTCATGGGCATCCAGAGAAGGTCAGGCCCCTTGCTGACAGGCCTATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394275.7
ENST00000461266.5
ENST00000480470.5
ENST00000672480.1
CDS CCA 72 bp CCACCACCTAGAGCATGTGGCAAGAAAATCAGCTACTaGGGTGGCCGCATGACACAGCATCTGCAGACACTG +
Preference number: 6 (lower is better)
Translates to: PPPRACGKKISY*GGRMTQHLQTL
Trigger: CAGTGTCTGCAGATGCTGTGTCATGCGGCCACCCCAGTAGCTGATTTTCTTGCCACATGCTCTAGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487875.5
CDS CCA 72 bp TGGATGGATGGACGGGCAGATGGGCGGATGGACAGATaGGTGGATGGAGGAATGGATGGACAGACAGACAAA +
Preference number: 6 (lower is better)
Translates to: WMDGRADGRMDR*VDGGMDGQTDK
Trigger: TTTGTCTGTCTGTCCATCCATTCCTCCATCCACCCATCTGTCCATCCGCCCATCTGCCCGTCCATCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486253.1
CDS CAA 72 bp AACTTGACCTCCCCAGCTCCTCCAAGAAGAACGTCCTaGCTAACACCACTGGTGCTGGCCAACATGCCCACA +
Preference number: 6 (lower is better)
Translates to: NLTSPAPPRRTS*LTPLVLANMPT
Trigger: TGTGGGCATGTTGGCCAGCACCAGTGGTGTTAGCAAGGACGTTCTTCTTGGAGGAGCTGGGGAGGTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487875.5
ENST00000556704.1
CDS GCA 72 bp GCCCACCATTCCCCTACCTTTGGATGCCTCTGTTTCTaGTTTGTCGTAATCTTCCAGCTTGAGGTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: AHHSPTFGCLCF*FVVIFQLEVAG
Trigger: GCCTGCCACCTCAAGCTGGAAGATTACGACAAAGCAGAAACAGAGGCATCCAAAGGTAGGGGAATGGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486253.1
ENST00000497152.6
CDS CCA 72 bp GCATTACAGTATTCCTTATTTTCATCTGGAGTGTGCTaGGGCCACACCCTGCAACACCGGCTGGACCAGGAC +
Preference number: 6 (lower is better)
Translates to: ALQYSLFSSGVC*GHTLQHRLDQD
Trigger: GTCCTGGTCCAGCCGGTGTTGCAGGGTGTGGCCCCAGCACACTCCAGATGAAAATAAGGAATACTGTAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554481.1
CDS CAA 90 bp GAGCTTACAAACTTGACCTCCCCAGCTCCTCCAAGAAGAACGTCCTaGCTAACACCACTGGTGCTGGCCAACATGCCCACACTACACAGA +
Preference number: 6 (lower is better)
Translates to: ELTNLTSPAPPRRTS*LTPLVLANMPTLHR
Trigger: TCTGTGTAGTGTGGGCATGTTGGCCAGCACCAGTGGTGTTAGCAAGGACGTTCTTCTTGGAGGAGCTGGGGAGGTCAAGTTTGTAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487875.5
ENST00000556704.1
CDS CAA 90 bp GAATTCGGGAAACTCCCAGGCCCCAGACTTTGGGAGCTTACAAACTaGACCTCCCCAGCTCCTCCAAGAAGAACGTCCTTGCTAACACCA +
Preference number: 6 (lower is better)
Translates to: EFGKLPGPRLWELTN*TSPAPPRRTSLLTP
Trigger: TGGTGTTAGCAAGGACGTTCTTCTTGGAGGAGCTGGGGAGGTCAAGTTTGTAAGCTCCCAAAGTCTGGGGCCTGGGAGTTTCCCGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487875.5
ENST00000556704.1
CDS TCA 72 bp TCTGGCGTGGCAGCTGCTGAGTCATGTTTTATAGGCTaGTGGCTCAGCCATCAGGAAGGGGTGTGTAAACCA +
Preference number: 6 (lower is better)
Translates to: SGVAAAESCFIG*WLSHQEGVCKP
Trigger: TGGTTTACACACCCCTTCCTGATGGCTGAGCCATCAGCCTATAAAACATGACTCAGCAGCTGCCACGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS CCA 72 bp TGCATCCAAACACTTCCTGAAACACCTAATAAGGGCTaGACATGGATTGTGCTGAGCACCAGGGCCATGGGG +
Preference number: 6 (lower is better)
Translates to: CIQTLPETPNKG*TWIVLSTRAMG
Trigger: CCCCATGGCCCTGGTGCTCAGCACAATCCATGTCCAGCCCTTATTAGGTGTTTCAGGAAGTGTTTGGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471780.1
CDS CAA 90 bp CACTCACCCACAATGATGGCACCTTCTTTGCCTCGGAAGCCTTTTTaGACACCTTCCTTGAGGGCATCAAACATAACCTGCAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: HSPTMMAPSLPRKPF*TPSLRASNITCSRW
Trigger: CCACCTGCTGCAGGTTATGTTTGATGCCCTCAAGGAAGGTGTCAAAAAAGGCTTCCGAGGCAAAGAAGGTGCCATCATTGTGGGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556704.1
ENST00000557212.5
CDS TCA 72 bp CTAAAGCATCTGTTCAAGCAGCGGGGGCTGACAATCTaGTCAGTGCTTGAAGCTATCCAGAGGCACAACTCC +
Preference number: 6 (lower is better)
Translates to: LKHLFKQRGLTI*SVLEAIQRHNS
Trigger: GGAGTTGTGCCTCTGGATAGCTTCAAGCACTGATCAGATTGTCAGCCCCCGCTGCTTGAACAGATGCTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556319.1
CDS TCA 72 bp TTCAGGACAGCTCATTCCATCAGGAACTCATGGCCTTaGACCAAGCTTGCCAGGAAGTGGGGAAAAGGCAGT +
Preference number: 6 (lower is better)
Translates to: FRTAHSIRNSWP*TKLARKWGKGS
Trigger: ACTGCCTTTTCCCCACTTCCTGGCAAGCTTGGTTCAAGGCCATGAGTTCCTGATGGAATGAGCTGTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556319.1
CDS GCA 72 bp AGAAAAGGTGAGGGTAGCTTTGGATGCCTCTGTTTCTaGTTTGTCGTAATCTTCCAGCTTGAGGTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: RKGEGSFGCLCF*FVVIFQLEVAG
Trigger: GCCTGCCACCTCAAGCTGGAAGATTACGACAAAGCAGAAACAGAGGCATCCAAAGCTACCCTCACCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495068.5
ENST00000557212.5