RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC119 (Homo sapiens)

Ensembl gene IDs: ENSG00000109103

Ensembl transcript IDs: ENST00000301032.8, ENST00000335765.9, ENST00000444148.1, ENST00000470125.5, ENST00000484980.5, ENST00000487844.1, ENST00000578434.1, ENST00000581945.1

Found 448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCAGCCAGGCCGGGCAAAGGTCAGGAGCTTGAGTCCCGCCACTaGAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTG +
Preference number: 1 (lower is better)
Translates to: GPARPGKGQELESRH*RGFRTGVQGQPNSL
Trigger: CAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTGCCCGGCCTGGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR GCA 90 bp GCTGTCAGACTGGGTCTCATACGGGTGGCGGATCATCTCGCTGACTaGAAGAGAGGCCCAGCCAGGCCGGGCAAAGGTCAGGAGCTTGAG +
Preference number: 1 (lower is better)
Translates to: AVRLGLIRVADHLAD*KRGPARPGKGQELE
Trigger: CTCAAGCTCCTGACCTTTGCCCGGCCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGACCCAGTCTGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR CCA 90 bp CCCTCATGGGGAGGGATGGGGCTAGGCCTAGGGCCCAGACTCCCTTaGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTT +
Preference number: 1 (lower is better)
Translates to: PSWGGMGLGLGPRLP*VAWQLEPTVDLCKF
Trigger: AAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAGGCCTAGCCCCATCCCTCCCCATGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR CCA 90 bp GGAGGGATGGGGCTAGGCCTAGGGCCCAGACTCCCTTGGGTGGCTTaGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTA +
Preference number: 1 (lower is better)
Translates to: GGMGLGLGPRLPWVA*QLEPTVDLCKFTTL
Trigger: TAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAGGCCTAGCCCCATCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR GCA 90 bp GTCAGGGCAGCCGTGGGGTCAGGGTGTCCCGCTGTAGGAATAGTCTaGTTTATTGTGCATCACCAGCCGGTCATCCACGAAGTAGAAGCT +
Preference number: 1 (lower is better)
Translates to: VRAAVGSGCPAVGIV*FIVHHQPVIHEVEA
Trigger: AGCTTCTACTTCGTGGATGACCGGCTGGTGATGCACAATAAAGCAGACTATTCCTACAGCGGGACACCCTGACCCCACGGCTGCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR CAA 90 bp CTGACTGCAAGAGAGGCCCAGCCAGGCCGGGCAAAGGTCAGGAGCTaGAGTCCCGCCACTGCAGGGGCTTCAGGACTGGGGTACAGGGAC +
Preference number: 2 (lower is better)
Translates to: LTAREAQPGRAKVRS*SPATAGASGLGYRD
Trigger: GTCCCTGTACCCCAGTCCTGAAGCCCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTGCCCGGCCTGGCTGGGCCTCTCTTGCAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp CTAGGGCCCAGACTCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTCTCCCAGCCCAGAACTaGAGCCTCCTGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: LGPRLPWVAWQLEPTVDLLPAQN*SLLGSG
Trigger: CCCTGACCCCAGGAGGCTCCAGTTCTGGGCTGGGAG...AAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR GCA 90 bp CTAGGGCCCAGACTCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTCTTGAGTCCCGCCACTaGAGGGGCTTCAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: LGPRLPWVAWQLEPTVDLLESRH*RGFRTG
Trigger: CCCAGTCCTGAAGCCCCTGCAGTGGCGGGACTCAAG...AAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp CTTCCCCACTCCCAGAAGACCCTGCCCGCGCACTCAGCTCCTCGGAGAGAGGGGAGAAGAGCCCCAGGGTaGGGAGAAATGGGATCAGAC +
Preference number: 2 (lower is better)
Translates to: LPHSQKTLPAHSAPRREGRRAPG*GEMGSD
Trigger: GTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT...CCCCTCTCTCCGAGGAGCTGAGTGCGCGGGCAGGGTCTTCTGGGAGTGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581945.1
3UTR-3UTR CCA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGTTGAGGGGTGAGCGTTaGGGAGGTCACAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGLRGER*GGHSSQ
Trigger: CTGGGAGCTGTGACCTCCCCAACGCTCACCCCTCAA...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR CCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGAAGAACTGGAGCCTCCTaGGGTCAGGGCAGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: FLPTLTQGPELLENSPSRRTGAS*GQGSRG
Trigger: CCCACGGCTGCCCTGACCCCAGGAGGCTCCAGTTCT...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR TCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACACCTTCCTCCCAACATTaGCTCAGGGTCCGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTPSSQH*LRVRSS
Trigger: GGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAGG...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR CCA 90 bp CTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTTGGGTCTCATACGGGTaGCGGATCATCTCGCTGACT +
Preference number: 2 (lower is better)
Translates to: LPTTPPHVAGRMGFMGLTWVSYG*RIISLT
Trigger: AGTCAGCGAGATGATCCGCCACCCGTATGAGACCCA...AGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR TCA 90 bp CTAGGGCCCAGACTCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTAGGGGAACACTATTCTaGAACTTGGGCCCAAGTAGG +
Preference number: 2 (lower is better)
Translates to: LGPRLPWVAWQLEPTVDLRGTLF*NLGPSR
Trigger: CCTACTTGGGCCCAAGTTTCAGAATAGTGTTCCCCT...AAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR CCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTTTGAGGGGTGAGCGTTaGGGAGGTCACAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLLRGER*GGHSSQ
Trigger: CTGGGAGCTGTGACCTCCCCAACGCTCACCCCTCAA...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR TCA 90 bp ACAAGTCCCTCTCCCTCCCGCAGCTCAGTCTCTAGACGCCCCCACTTCCCCACTGGAAGTCGAAGCTTTTaGGTAGCTGGTTGCGGAAGT +
Preference number: 2 (lower is better)
Translates to: TSPSPSRSSVSRRPHFPTGSRSF*VAGCGS
Trigger: ACTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCC...AGTGGGGAAGTGGGGGCGTCTAGAGACTGAGCTGCGGGAGGGAGAGGGACTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581945.1
3UTR-3UTR CCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAAGAAGAGCCCCAGGGTaGGGAGAAATGGGATCAGAC +
Preference number: 2 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTRRAPG*GEMGSD
Trigger: GTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp TGCAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCAGAAGAGCCCCAGGGTaGGGAGAAATGGGATCAGAC +
Preference number: 2 (lower is better)
Translates to: CRGFRTGVQGQPNSLKYPRRAPG*GEMGSD
Trigger: GTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT...GGGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTCCCAGCCCAGAACTaGAGCCTCCTGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSLPAQN*SLLGSG
Trigger: CCCTGACCCCAGGAGGCTCCAGTTCTGGGCTGGGAG...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR TCA 90 bp CAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCCTCTTTCTCTACGGATaGTATGGGAATGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: QKSPRVGRNGIRPTSPSPLFLYG*YGNGGR
Trigger: TCTGCCACCATTCCCATATCATCCGTAGAGAAAGAG...GGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR GCA 90 bp CACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCTCTTGCTGCTGGGGATaGAGAAGCCAAAGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: HRRAPGWGEMGSDPQVPLSCCWG*RSQSGS
Trigger: ACTTCCACTTTGGCTTCTGCATCCCCAGCAGCAAGA...GAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581945.1
3UTR-3UTR CCA 90 bp ACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCGGATGATATGGGAATaGTGGCAGACACAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: TEEPQGGEKWDQTHKSLSRMIWE*WQTQKS
Trigger: GCTCTTCTGTGTCTGCCACCATTCCCATATCATCCG...GGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301032.8
ENST00000470125.5
ENST00000581945.1
3UTR-3UTR GCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTGATCATCTCGCTGACTaGAAGAGAGGCCCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPDHLAD*KRGPAR
Trigger: CCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATC...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp CACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCTCTCTACGGATGATATaGGAATGGTGGCAGACACAG +
Preference number: 2 (lower is better)
Translates to: HRRAPGWGEMGSDPQVPLSLRMI*EWWQTQ
Trigger: CTGTGTCTGCCACCATTCCCATATCATCCGTAGAGA...GAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301032.8
ENST00000470125.5
ENST00000581945.1
3UTR-3UTR CCA 90 bp ACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCTCTCTACGGATGATATaGGAATGGTGGCAGACACAG +
Preference number: 2 (lower is better)
Translates to: TEEPQGGEKWDQTHKSLSSLRMI*EWWQTQ
Trigger: CTGTGTCTGCCACCATTCCCATATCATCCGTAGAGA...GGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301032.8
ENST00000470125.5
ENST00000581945.1
3UTR-3UTR TCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGGTTGTCCGGAAGTCCTaGCTGCTCCTCTCACAGGCC +
Preference number: 2 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLVVRKS*LLLSQA
Trigger: GGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAAC...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR CCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCAGGGGCTTCAGGACTaGGGTACAGGGACAGCCAAA +
Preference number: 2 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSQGLQD*GTGTAK
Trigger: TTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTG...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR TCA 90 bp GATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGCAGGGGACAGCAAAGGTCAGGAGCTTaGGTCCCGCCACTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: DLCKFTTLNGLKVVGRGQQRSGA*VPPLQG
Trigger: CCCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTG...CTGTCCCCTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR GCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGGATCATCTCGCTGACTaGAAGAGAGGCCCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLDHLAD*KRGPAR
Trigger: CCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATC...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTTCATGGGCTTGACTaGGGACACCAGGTACCCTTC +
Preference number: 2 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSLHGLD*GHQVPF
Trigger: GAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAG...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR CCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCTCCCAGCCCAGAACTaGAGCCTCCTGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSLPAQN*SLLGSG
Trigger: CCCTGACCCCAGGAGGCTCCAGTTCTGGGCTGGGAG...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR TCA 90 bp TCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTTTCTCTACGGATaGTATGGGAATGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SLGWLGSWSPPWIFVNLQLFLYG*YGNGGR
Trigger: TCTGCCACCATTCCCATATCATCCGTAGAGAAAGAG...TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR TCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTGGCGGATCATCTCGCTaGCTGCAAGAGAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSGGSSR*LQERPS
Trigger: GCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCC...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCATGATATGGGAATGGTaGCAGACACAGAAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSMIWEW*QTQKSP
Trigger: GGGGCTCTTCTGTGTCTGCCACCATTCCCATATCAT...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTTCTCTACGGATGATATaGGAATGGTGGCAGACACAG +
Preference number: 2 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPSLRMI*EWWQTQ
Trigger: CTGTGTCTGCCACCATTCCCATATCATCCGTAGAGA...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGCAGGGGCTTCAGGACTaGGGTACAGGGACAGCCAAA +
Preference number: 2 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVQGLQD*GTGTAK
Trigger: TTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTG...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGCGGATGATATGGGAATaGTGGCAGACACAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLRMIWE*WQTQKS
Trigger: GCTCTTCTGTGTCTGCCACCATTCCCATATCATCCG...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CCA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGATGATATGGGAATGGTaGCAGACACAGAAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKMIWEW*QTQKSP
Trigger: GGGGCTCTTCTGTGTCTGCCACCATTCCCATATCAT...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR GCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGGCTGTAGGAATAGTCTaGTTTATTGTGCATCACCAG +
Preference number: 2 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLAVGIV*FIVHHQ
Trigger: CTGGTGATGCACAATAAAGCAGACTATTCCTACAGC...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR TCA 72 bp GAGAGGCCCAGCCAGGCCGGGCAAAGGTCAGGAGCTTaGGTCCCGCCACTGCAGGGGCTTCAGGACTGGGGT +
Preference number: 3 (lower is better)
Translates to: ERPSQAGQRSGA*VPPLQGLQDWG
Trigger: ACCCCAGTCCTGAAGCCCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTGCCCGGCCTGGCTGGGCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CAA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATGCAAAGGTCAGGAGCTaGAGTCCCGCCACTGCAGGG +
Preference number: 3 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHAKVRS*SPATAG
Trigger: CCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTGC...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CAA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTGCAAAGGTCAGGAGCTaGAGTCCCGCCACTGCAGGG +
Preference number: 3 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPAKVRS*SPATAG
Trigger: CCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTGC...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR CCA 72 bp GGGCTAGGCCTAGGGCCCAGACTCCCTTGGGTGGCTTaGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTT +
Preference number: 3 (lower is better)
Translates to: GLGLGPRLPWVA*QLEPTVDLCKF
Trigger: AAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAGGCCTAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR-3UTR CAA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTATGGGCTTCATGGGCTaGACTGGGGACACCAGGTAC +
Preference number: 3 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLMGFMG*TGDTRY
Trigger: GTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCAT...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR CCA 72 bp CCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTaGGGACACCAGGTACCCTTCCTCCCAACATTGACT +
Preference number: 3 (lower is better)
Translates to: PCSRPHGLHGLD*GHQVPFLPTLT
Trigger: AGTCAATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
3UTR GCA 72 bp GCCGTGGGGTCAGGGTGTCCCGCTGTAGGAATAGTCTaGTTTATTGTGCATCACCAGCCGGTCATCCACGAA +
Preference number: 3 (lower is better)
Translates to: AVGSGCPAVGIV*FIVHHQPVIHE
Trigger: TTCGTGGATGACCGGCTGGTGATGCACAATAAAGCAGACTATTCCTACAGCGGGACACCCTGACCCCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
3UTR-3UTR CAA 90 bp ACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCTGGAAGTCGAAGCTTTaGAGTAGCTGGTTGCGGAAG +
Preference number: 3 (lower is better)
Translates to: TEEPQGGEKWDQTHKSLSWKSKL*SSWLRK
Trigger: CTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCCA...GGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581945.1
3UTR CCA 72 bp CTGAAATATCCCCAGCCTCTTTCTCTACGGATGATATaGGAATGGTGGCAGACACAGAAGAGCCCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: LKYPQPLSLRMI*EWWQTQKSPRV
Trigger: CACCCTGGGGCTCTTCTGTGTCTGCCACCATTCCCATATCATCCGTAGAGAAAGAGGCTGGGGATATTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp CTTCCCCACTCCCAGAAGACCCTGCCCGCGCACTCAGCTCCTCGGAGAGAGGGGAACTCCACCCACCGGTaGTCCGCTGCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPHSQKTLPAHSAPRREGNSTHR*SAAAPA
Trigger: TGCTGGGGCTGCAGCGGATCACCGGTGGGTGGAGTT...CCCCTCTCTCCGAGGAGCTGAGTGCGCGGGCAGGGTCTTCTGGGAGTGGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581945.1
CDS-3UTR CCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAGCTGCCTGCGCCGGCTaGAGCCGGGGGAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPAACAG*SRGKWE
Trigger: CTCCCACTTCCCCCGGCTCCAGCCGGCGCAGGCAGC...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301032.8
3UTR CAA 72 bp AGAGAGGCCCAGCCAGGCCGGGCAAAGGTCAGGAGCTaGAGTCCCGCCACTGCAGGGGCTTCAGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: REAQPGRAKVRS*SPATAGASGLG
Trigger: CCCCAGTCCTGAAGCCCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTGCCCGGCCTGGCTGGGCCTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGATCGGCTGCTTCCTCTaGAGCGGCCCCGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGIGCFL*SGPGLG
Trigger: GCCCAGGCCGGGGCCGCTGCAGAGGAAGCAGCCGAT...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR CCA 90 bp AGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCAGGCGGCTGTGGTATaGGGGCCACGCTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SRPHGLHGLDWGHQVPFLQAAVV*GPRSGP
Trigger: CGGGCCAGAGCGTGGCCCCCATACCACAGCCGCCTG...GAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR GCA 90 bp ACTTCCCCACTCCCAGAAGACCCTGCCCGCGCACTCAGCTCCTCGGAGAGAGGGACTCCCAGAAGACCCTaGCCGCGCACTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPEDPARALSSSERGTPRRP*PRTQLL
Trigger: GAGGAGCTGAGTGCGCGGGCAGGGTCTTCTGGGAGT...CCCTCTCTCCGAGGAGCTGAGTGCGCGGGCAGGGTCTTCTGGGAGTGGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581945.1
CDS-3UTR CCA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGCTCCCAGCCCAGAACTaGAGCCTCCTGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLLPAQN*SLLGSG
Trigger: CCCTGACCCCAGGAGGCTCCAGTTCTGGGCTGGGAG...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTCTCCCTTGGGTGGCTTaGCAGCTGGAGCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLLPWVA*QLEPTV
Trigger: CACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAG...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTCCCGCAGAGAGGTAGTCACCGGTaGTCCGCTGCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PQGGEKWDQTHKSLSLPQRGSHR*SAAAPA
Trigger: TGCTGGGGCTGCAGCGGATCACCGGTGACTACCTCT...CTGCGGGAGGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301032.8
CDS-3UTR TCA 90 bp CCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTCCCGCAGGGCGGATCATCTCGCTaGCTGCAAGAGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PQGGEKWDQTHKSLSLPQGGSSR*LQERPS
Trigger: GCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCC...CTGCGGGAGGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp ACTGCAAGAGAGGCCCAGCCAGGCCGGGCAAAGGTCAGGAGCTTGAGTCCCGCCTGGGCTTCATGGGCTTaGCTGGGGACACCAGGTACC +
Preference number: 4 (lower is better)
Translates to: TAREAQPGRAKVRSLSPAWASWA*LGTPGT
Trigger: GGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCA...GGCGGGACTCAAGCTCCTGACCTTTGCCCGGCCTGGCTGGGCCTCTCTTGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAATCGGCTGCTTCCTCTaGAGCGGCCCCGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTIGCFL*SGPGLG
Trigger: GCCCAGGCCGGGGCCGCTGCAGAGGAAGCAGCCGAT...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR GCA 90 bp CACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCATCGGCTGCTTCCTCTaGAGCGGCCCCGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HRRAPGWGEMGSDPQVPLIGCFL*SGPGLG
Trigger: GCCCAGGCCGGGGCCGCTGCAGAGGAAGCAGCCGAT...GAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000581945.1
CDS-3UTR GCA 90 bp CTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCCCAGCCAGGCCGCTTGAGTCCCGCCACTaGAGGGGCTTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LIRVADHLADCKRGPARPLESRH*RGFRTG
Trigger: CCCAGTCCTGAAGCCCCTGCAGTGGCGGGACTCAAG...CGGCCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCATTCCGCAGGCGGCTGTaGTATGGGGGCCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPFRRRL*YGGHAL
Trigger: CAGAGCGTGGCCCCCATACCACAGCCGCCTGCGGAA...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR CCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACAAAGCGCCCAGCATTaGGGTCCAGGTCCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQQSAQH*GPGPAG
Trigger: ACCGGCGGGACCTGGACCCCAATGCTGGGCGCTTTG...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGAGAACTGGAGCCTCCTaGGGTCAGGGCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGRTGAS*GQGSRG
Trigger: CCCACGGCTGCCCTGACCCCAGGAGGCTCCAGTTCT...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCCCAGCCAGGCCGCATCCTACTGGTCTCTaGGGGCCAGGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LIRVADHLADCKRGPARPHPTGL*GPGKGR
Trigger: CCTGCCCTTCCCTGGCCCCCAGAGACCAGTAGGATG...CGGCCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS-3UTR CCA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACGGAGGTGGCAGAGTaGGGAGCAGGATCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLTEVAE*GAGSQC
Trigger: GCACTGGGATCCTGCTCCCCACTCTGCCACCTCCGT...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTCTCCTGGCAGCCATCTaGTACCCTGGGGCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLLLAAI*YPGAQH
Trigger: ATGCTGGGCCCCAGGGTACCAGATGGCTGCCAGGAG...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp AGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCAAAGGTCAGGAGCTTaGGTCCCGCCACTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRPHGLHGLDWGHQVPFLQRSGA*VPPLQG
Trigger: CCCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTG...GAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACAAAGGTCAGGAGCTTaGGTCCCGCCACTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQQRSGA*VPPLQG
Trigger: CCCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTG...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGTGGGCTTCATGGGCTTaGCTGGGGACACCAGGTACC +
Preference number: 4 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLWASWA*LGTPGT
Trigger: GGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCA...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAGGGGAAACAGGCAGCTaGGCAAGGAAGGGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPGETGS*ARKGPQ
Trigger: TTGCGGCCCCTTCCTTGCTCAGCTGCCTGTTTCCCC...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAAACTCCCAGAAGACCCTaGCCGCGCACTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQTPRRP*PRTQLL
Trigger: GAGGAGCTGAGTGCGCGGGCAGGGTCTTCTGGGAGT...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp GACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCCCACCGGTGATCCGCTaGAGCCCCAGCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: DTEEPQGGEKWDQTHKSLPPVIR*SPSTSS
Trigger: GGAGGACGTGCTGGGGCTGCAGCGGATCACCGGTGG...GAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581945.1
CDS-3UTR GCA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGAGGGACCTCAGTCCCTaGCCTTGGGGTACACCCCCA +
Preference number: 4 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGRDLSP*PWGTPP
Trigger: TGGGGGTGTACCCCAAGGGCAGGGACTGAGGTCCCT...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTTCCGCAGGCGGCTGTaGTATGGGGGCCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: QKSPRVGRNGIRPTSPSPFRRRL*YGGHAL
Trigger: CAGAGCGTGGCCCCCATACCACAGCCGCCTGCGGAA...GGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000581945.1
CDS-3UTR CCA 90 bp TTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCAAAGCGCCCAGCATTaGGGTCCAGGTCCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: FLDVEANSLPTTPPHVAGQSAQH*GPGPAG
Trigger: ACCGGCGGGACCTGGACCCCAATGCTGGGCGCTTTG...GCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTTTGAGGGGTGAGCGTTaGGGAGGTCACAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLLRGER*GGHSSQ
Trigger: CTGGGAGCTGTGACCTCCCCAACGCTCACCCCTCAA...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp TTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCTCCCTTGGGTGGCTTaGCAGCTGGAGCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: FLDVEANSLPTTPPHVAGLPWVA*QLEPTV
Trigger: CACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAG...GCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTCTTGGCCCCTCATaGGGAGGGATGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPCLGPS*GGMGLG
Trigger: GCCTAGCCCCATCCCTCCCCATGAGGGGCCAAGACA...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTCTCAAGCCCAGAGCCTaGGATATGGCAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLLKPRA*DMAGGR
Trigger: CCTCCCACCTGCCATATCCCAGGCTCTGGGCTTGAG...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTACCAGGTCCCGCCGGTTaGTGGGCAACCGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVPGPAG*WATVLR
Trigger: TCTCAGAACGGTTGCCCATCAACCGGCGGGACCTGG...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGGGAGGAAGGCAGGCGTaGACTGGTAGCGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGGGRQA*TGSGQS
Trigger: GCTTTGTCCGCTACCAGTTCACGCCTGCCTTCCTCC...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAAGGAGGAAGGCAGGCGTaGACTGGTAGCGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQGGRQA*TGSGQS
Trigger: GCTTTGTCCGCTACCAGTTCACGCCTGCCTTCCTCC...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCGGCGGATCATCTCGCTaGCTGCAAGAGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QKSPRVGRNGIRPTSPSPGGSSR*LQERPS
Trigger: GCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCC...GGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACGCAGCCCTGGCTATaGGCCACCACCATGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLTQPWL*ATTMEK
Trigger: TTTCTCCATGGTGGTGGCTCATAGCCAGGGCTGCGT...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGTCACCTTCATGGCCTTaGGGGGCCGAGGCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQSPSWP*GAEARL
Trigger: CAGGCGAGCCTCGGCCCCGCAAGGCCATGAAGGTGA...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR GCA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTTCACCGGTGATCCGCTaGAGCCCCAGCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPSPVIR*SPSTSS
Trigger: GGAGGACGTGCTGGGGCTGCAGCGGATCACCGGTGA...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR GCA 90 bp CCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACACCGCAAAGCCCCTGCTaGCAGGTCAGCTTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PHGLHGLDWGHQVPFLPTPQSPC*QVSLCG
Trigger: CCCACACAAGCTGACCTGGCAGCAGGGGCTTTGCGG...TGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATCAAAGCGCCCAGCATTaGGGTCCAGGTCCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHQSAQH*GPGPAG
Trigger: ACCGGCGGGACCTGGACCCCAATGCTGGGCGCTTTG...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp ACTTCCCCACTCCCAGAAGACCCTGCCCGCGCACTCAGCTCCTCGGAGAGAGGGAGAAGAGCCCCAGGGTaGGGAGAAATGGGATCAGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPEDPARALSSSERGRRAPG*GEMGSD
Trigger: GTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT...CCCTCTCTCCGAGGAGCTGAGTGCGCGGGCAGGGTCTTCTGGGAGTGGGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581945.1
CDS-3UTR CCA 90 bp GTCAGACTGGGTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCAGAACTGGAGCCTCCTaGGGTCAGGGCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: VRLGLIRVADHLADCKRGRTGAS*GQGSRG
Trigger: CCCACGGCTGCCCTGACCCCAGGAGGCTCCAGTTCT...GCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGACCCAGTCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp GTCAGACTGGGTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCCTCCCAGCCCAGAACTaGAGCCTCCTGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VRLGLIRVADHLADCKRGLPAQN*SLLGSG
Trigger: CCCTGACCCCAGGAGGCTCCAGTTCTGGGCTGGGAG...GCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGACCCAGTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCAGGGTGGCTTGGCAGCTaGAGCCCACCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPGWLGS*SPPWIF
Trigger: AAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCC...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTATGTCTTGGCCCCTCATaGGGAGGGATGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVCLGPS*GGMGLG
Trigger: GCCTAGCCCCATCCCTCCCCATGAGGGGCCAAGACA...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAGGAGTGCCATCCTACTaGTCTCTGGGGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPGVPSY*SLGARE
Trigger: TTCCCTGGCCCCCAGAGACCAGTAGGATGGCACTCC...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGGGATCACTGCCCTCTaGAAAGAGGGACCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLGITAL*KEGPQS
Trigger: GGACTGAGGTCCCTCTTTCCAGAGGGCAGTGATCCC...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CTAGGGCCCAGACTCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTGGGAACCAAGAACAGTaGGAGGCCCTGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGPRLPWVAWQLEPTVDLGNQEQ*EALPEE
Trigger: TTCCTCAGGCAGGGCCTCCCACTGTTCTTGGTTCCC...AAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAAGAGGTAGTCACCGGTaGTCCGCTGCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTRGSHR*SAAAPA
Trigger: TGCTGGGGCTGCAGCGGATCACCGGTGACTACCTCT...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR TCA 90 bp CTTCCCCACTCCCAGAAGACCCTGCCCGCGCACTCAGCTCCTCGGAGAGAGGGGGGAAGTCGAAGCTTTTaGGTAGCTGGTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LPHSQKTLPAHSAPRREGGSRSF*VAGCGS
Trigger: ACTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCC...CCCCTCTCTCCGAGGAGCTGAGTGCGCGGGCAGGGTCTTCTGGGAGTGGGGAAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000581945.1
CDS-3UTR TCA 90 bp CAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTGGGCTTCATGGGCTTaGCTGGGGACACCAGGTACC +
Preference number: 4 (lower is better)
Translates to: QKSPRVGRNGIRPTSPSPWASWA*LGTPGT
Trigger: GGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCA...GGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp CCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACAGTTGTCCGGAAGTCCTaGCTGCTCCTCTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PHGLHGLDWGHQVPFLPTVVRKS*LLLSQA
Trigger: GGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAAC...TGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGACAAGGCCACCTCCTaGACACTCTCTCTCCCACTC +
Preference number: 4 (lower is better)
Translates to: ANSLPTTPPHVAGRMGFMDKATS*TLSLPL
Trigger: GAGTGGGAGAGAGAGTGTTCAGGAGGTGGCCTTGTC...CATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAGAAGAGGCAGGGCCCTaGGTCTACTACAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPEEAGP*VYYSPH
Trigger: ATGTGGGCTGTAGTAGACTCAGGGCCCTGCCTCTTC...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp GTCAGACTGGGTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCCTTGAGTCCCGCCACTaGAGGGGCTTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VRLGLIRVADHLADCKRGLESRH*RGFRTG
Trigger: CCCAGTCCTGAAGCCCCTGCAGTGGCGGGACTCAAG...GCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGACCCAGTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp AGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCTCCGGAAGTCCTGACTaGTCCTCTCACAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SRPHGLHGLDWGHQVPFLSGSPD*SSHRPS
Trigger: GGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGA...GAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCAGCTCCTACCATGGGCTaGAATCTCAGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPAPTMG*NLSQSL
Trigger: GAGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGC...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGCTCCTACCATGGGCTaGAATCTCAGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ANSLPTTPPHVAGRMGFMAPTMG*NLSQSL
Trigger: GAGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGC...CATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGGCCGCAAAGCCCCTaGTGCCAGGTCAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTGPQSP*CQVSLC
Trigger: ACACAAGCTGACCTGGCAGCAGGGGCTTTGCGGCCC...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp CATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTGGAGCAGGATCCCAGTaGCCAACTCCCAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: HVAGRMGFMGLTGDTRYPGAGSQ*PTPRSL
Trigger: CAGGGATCTGGGAGTTGGGCACTGGGATCCTGCTCC...AGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp CATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTAACAGTGGGAGGCCCTaGCTGAGGAAGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HVAGRMGFMGLTGDTRYPNSGRP*LRKLRE
Trigger: CTCCCTGAGCTTCCTCAGGCAGGGCCTCCCACTGTT...AGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp TTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCCTTCTTCACCTTCATaGCCTTGCGGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: FLDVEANSLPTTPPHVAGPSSPS*PCGAEA
Trigger: AGCCTCGGCCCCGCAAGGCCATGAAGGTGAAGAAGG...GCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR CCA 90 bp GTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCCCAGCCAGGCCAGGGGCTTCAGGACTaGGGTACAGGGACAGCCAAA +
Preference number: 4 (lower is better)
Translates to: VSYGWRIISLTAREAQPGQGLQD*GTGTAK
Trigger: TTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTG...GCCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp ACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCTCCCAGCCCAGAACTaGAGCCTCCTGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TQKSPRVGRNGIRPTSPSLPAQN*SLLGSG
Trigger: CCCTGACCCCAGGAGGCTCCAGTTCTGGGCTGGGAG...AGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp CCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACAGGGTGGCTTGGCAGCTaGAGCCCACCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: PHGLHGLDWGHQVPFLPTGWLGS*SPPWIF
Trigger: AAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCC...TGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp ACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCTCCCTTGGGTGGCTTaGCAGCTGGAGCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: TQKSPRVGRNGIRPTSPSLPWVA*QLEPTV
Trigger: CACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAG...AGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGCCAGACTCCCTTGGGTaGCTTGGCAGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQPDSLG*LGSWSP
Trigger: TGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGG...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATCCAGACTCCCTTGGGTaGCTTGGCAGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHPDSLG*LGSWSP
Trigger: TGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGG...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTCCAGACTCCCTTGGGTaGCTTGGCAGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPPDSLG*LGSWSP
Trigger: TGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGG...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp ACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTGGGCCCAGACTCCCTTaGGTGGCTTGGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TQKSPRVGRNGIRPTSPSGPRLP*VAWQLE
Trigger: CTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCC...AGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACATGTCTTGGCCCCTCATaGGGAGGGATGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTCLGPS*GGMGLG
Trigger: GCCTAGCCCCATCCCTCCCCATGAGGGGCCAAGACA...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATAGGGAACGGAGGTaGCAGAGTGGGGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQHRERR*QSGEQD
Trigger: ATCCTGCTCCCCACTCTGCCACCTCCGTTCCCTATG...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTAGCCATCTGGTACCCTaGGGCCCAGCATGGACTTTA +
Preference number: 4 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLSHLVP*GPAWTL
Trigger: TAAAGTCCATGCTGGGCCCCAGGGTACCAGATGGCT...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATCATCACATCCTCCCCTaGTGGCCCACAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHHHILP*WPTEAW
Trigger: CCAGGCCTCTGTGGGCCACCAGGGGAGGATGTGATG...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGCTGGGATATGGCAGGTaGGAGGAGGCCAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLLGYGR*EEANFA
Trigger: AGCAAAGTTGGCCTCCTCCCACCTGCCATATCCCAG...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
3UTR CAA 72 bp CCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTaGACTGGGGACACCAGGTACCCTTCCTCCCAACAT +
Preference number: 4 (lower is better)
Translates to: PPHVAGRMGFMG*TGDTRYPSSQH
Trigger: ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCCAGCCTCCAGGTCCCGCCGGTTaGTGGGCAACCGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GFRTGVQGQPNSLKYPQPPGPAG*WATVLR
Trigger: TCTCAGAACGGTTGCCCATCAACCGGCGGGACCTGG...AGGCTGGGGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp ACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCGGAGGAAGGCAGGCGTaGACTGGTAGCGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: TEEPQGGEKWDQTHKSLSGGRQA*TGSGQS
Trigger: GCTTTGTCCGCTACCAGTTCACGCCTGCCTTCCTCC...GGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp AGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTCCTTCCTCCCAACATTaGCTCAGGGTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRAPGWGEMGSDPQVPLPPSSQH*LRVRSS
Trigger: GGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAGG...AGGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGCAGCTGCCCCTGGCATaGCATCTAGATGTATCAGGT +
Preference number: 4 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLQLPLA*HLDVSG
Trigger: ACCTGATACATCTAGATGTCATGCCAGGGGCAGCTG...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGAGGGGAAACAGGCAGCTaGGCAAGGAAGGGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: FLPTLTQGPELLENSPSRGETGS*ARKGPQ
Trigger: TTGCGGCCCCTTCCTTGCTCAGCTGCCTGTTTCCCC...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATCCTCCCTCTCTCCATTaGTGCCTGCTTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHPPSLH*CLLGQG
Trigger: CCCTTGCCCAAGCAGGCATCAATGGAGAGAGGGAGG...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp CATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTGGGAGCTACAGGGCCTaGTCTAACCCTCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: HVAGRMGFMGLTGDTRYPGSYRA*SNPHSS
Trigger: AGAGCTGTGAGGGTTAGATCAGGCCCTGTAGCTCCC...AGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAAGACCAGGCAAGGGGTaGCAGGGTGGAAATCCCTGG +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTRPGKG*QGGNPW
Trigger: CCAGGGATTTCCACCCTGGCACCCCTTGCCTGGTCT...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTACTCGTGCTGTCAGCCTaGACAGCATCACATCCTCCC +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVLVLSA*TASHPP
Trigger: GGGAGGATGTGATGCTGTGCAGGCTGACAGCACGAG...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCAGGCGGCTGTGGTATaGGGGCCACGCTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PWVAWQLEPTVDLCKFTTQAAVV*GPRSGP
Trigger: CGGGCCAGAGCGTGGCCCCCATACCACAGCCGCCTG...AGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR CCA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGAGAAGAGCCCCAGGGTaGGGAGAAATGGGATCAGAC +
Preference number: 4 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGRRAPG*GEMGSD
Trigger: GTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp AGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCTTCATGGGCTTGACTaGGGACACCAGGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: SRPHGLHGLDWGHQVPFLLHGLD*GHQVPF
Trigger: GAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAG...GAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATGGGTGGCTTGGCAGCTaGAGCCCACCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHGWLGS*SPPWIF
Trigger: AAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCC...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGGGGTGGCTTGGCAGCTaGAGCCCACCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQGWLGS*SPPWIF
Trigger: AAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCC...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCAGACTCCCTTGGGTaGCTTGGCAGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLPDSLG*LGSWSP
Trigger: TGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGG...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAGTCCAGCTCCTACCATaGGCTGCAATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPVQLLP*AAISAS
Trigger: ACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGAC...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGACATCCTACTGGTCTCTaGGGGCCAGGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FLPTLTQGPELLENSPSRHPTGL*GPGKGR
Trigger: CCTGCCCTTCCCTGGCCCCCAGAGACCAGTAGGATG...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGACTCAGTCCCTGCCCTTaGGGTACACCCCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FLPTLTQGPELLENSPSRLSPCP*GTPPVW
Trigger: CCACACTGGGGGTGTACCCCAAGGGCAGGGACTGAG...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACACCAGGTCAGCTTGTGTaGGACCCCAGAGTAGCTACC +
Preference number: 4 (lower is better)
Translates to: PHGLHGLDWGHQVPFLPTPGQLV*DPRVAT
Trigger: GGTAGCTACTCTGGGGTCCCACACAAGCTGACCTGG...TGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTCCCGCAGAGACTGGGGGCTTCTTaGTTTCAAAGAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: PQGGEKWDQTHKSLSLPQRLGAS*FQRGQC
Trigger: GCACTGTCCTCTTTGAAATCAAGAAGCCCCCAGTCT...CTGCGGGAGGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGGGAAGTCGAAGCTTTTaGGTAGCTGGTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLGSRSF*VAGCGS
Trigger: ACTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCC...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp ACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCTTCCTCCCAACATTaGCTCAGGGTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TQKSPRVGRNGIRPTSPSPSSQH*LRVRSS
Trigger: GGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAGG...AGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGACCTTCCTCCCAACATTaGCTCAGGGTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLPTLTQGPELLENSPSRPSSQH*LRVRSS
Trigger: GGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAGG...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCCAGCCTGTTGTCCGGAAGTCCTaGCTGCTCCTCTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GFRTGVQGQPNSLKYPQPVVRKS*LLLSQA
Trigger: GGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAAC...AGGCTGGGGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGAGTTGTCCGGAAGTCCTaGCTGCTCCTCTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: FLPTLTQGPELLENSPSRVVRKS*LLLSQA
Trigger: GGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAAC...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp TTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCTGGTACCCTGCCTTTaGGAACCACCTGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FLDVEANSLPTTPPHVAGLVPCL*EPPVKG
Trigger: CCCCTTTACAGGTGGTTCTCAAAGGCAGGGTACCAG...GCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATTATGCCACTCCCCATaGGAGGAACCACAGCCAACA +
Preference number: 4 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPLCHSP*EEPQPT
Trigger: TGTTGGCTGTGGTTCCTCTCATGGGGAGTGGCATAA...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATGCTCAGAGAGGTaGGGTTACTTGCCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPTCSER*GYLPKV
Trigger: GACCTTGGGCAAGTAACCTCACCTCTCTGAGCATGT...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATGCTCCTACCATGGGCTaGAATCTCAGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHAPTMG*NLSQSL
Trigger: GAGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGC...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCCCAGCCAGGCACAGGGGATAAGGAGTaGCATCCTACTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSYGWRIISLTAREAQPGTGDKE*HPTGLW
Trigger: CCAGAGACCAGTAGGATGGCACTCCTTATCCCCTGT...GCCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS-3UTR GCA 90 bp CATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTGGGAGTCCGGTGTTCTaGTGCTTTGGAAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HVAGRMGFMGLTGDTRYPGSPVF*CFGSSR
Trigger: CCTAGAGCTTCCAAAGCAGCAGAACACCGGACTCCC...AGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTGCAGGGAGGGACTCGTaGTGTCAGCCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLAGRDS*CQPAQH
Trigger: ATGCTGTGCAGGCTGACAGCACGAGTCCCTCCCTGC...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTCGGATGATATGGGAATaGTGGCAGACACAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLRMIWE*WQTQKS
Trigger: GCTCTTCTGTGTCTGCCACCATTCCCATATCATCCG...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGTCCAGCTCCTACCATaGGCTGCAATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVVQLLP*AAISAS
Trigger: ACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGAC...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGGTACACCCCCAGTGTaGAAGAGACATAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVGTPPV*KRHNSA
Trigger: GGCGGAGTTATGTCTCTTCCACACTGGGGGTGTACC...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGTGCTAGTCCAGGCTTaGAGGGACATTATGCCACTC +
Preference number: 4 (lower is better)
Translates to: ANSLPTTPPHVAGRMGFMVLVQA*RDIMPL
Trigger: GAGTGGCATAATGTCCCTCCAAGCCTGGACTAGCAC...CATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCAACTACAGCCCACATGTaGGGTGGGGAGAGAATGGAA +
Preference number: 4 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPTTAHM*GGERME
Trigger: TTCCATTCTCTCCCCACCCCACATGTGGGCTGTAGT...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGTGCTCAGGGAGGCCCTaGCAACAAAAAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGCSGRP*QQKELR
Trigger: TCTCAGCTCTTTTTGTTGCCAGGGCCTCCCTGAGCA...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCAGGAAGTCGAAGCTTTTaGGTAGCTGGTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPGSRSF*VAGCGS
Trigger: ACTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCC...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAAAGGGGAACACTATTCTaGAACTTGGGCCCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQRGTLF*NLGPSR
Trigger: CCTACTTGGGCCCAAGTTTCAGAATAGTGTTCCCCT...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCCAGCTGCCCCTGGCATaGCATCTAGATGTATCAGGT +
Preference number: 4 (lower is better)
Translates to: QKSPRVGRNGIRPTSPSPQLPLA*HLDVSG
Trigger: ACCTGATACATCTAGATGTCATGCCAGGGGCAGCTG...GGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS-3UTR TCA 90 bp CTGCAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCTCCCACTCTGGAGTTaGGGGTCCTCATTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQGLQDWGTGTAKQPEISLPLWS*GSSFWP
Trigger: AGGCCAGAATGAGGACCCTCAACTCCAGAGTGGGAG...GGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS-3UTR GCA 90 bp CTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTTCTTGCTGCTGGGGATaGAGAAGCCAAAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LPTTPPHVAGRMGFMGLTSCCWG*RSQSGS
Trigger: ACTTCCACTTTGGCTTCTGCATCCCCAGCAGCAAGA...AGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGAGATCATCTCGCTGACTaGAAGAGAGGCCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLPTLTQGPELLENSPSRDHLAD*KRGPAR
Trigger: CCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATC...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp CTGCAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCTCCGGAAGTCCTGACTaGTCCTCTCACAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LQGLQDWGTGTAKQPEISSGSPD*SSHRPS
Trigger: GGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGA...GGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTTCCGGAAGTCCTGACTaGTCCTCTCACAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLSGSPD*SSHRPS
Trigger: GGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGA...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGTCTCTTCCCCAGGTCTaGTTCTTCCCCAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQSLPQV*FFPKPD
Trigger: GTCAGGCTTGGGGAAGAAGCAGACCTGGGGAAGAGA...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp TGCAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCCAGGGGCTTCAGGACTaGGGTACAGGGACAGCCAAA +
Preference number: 4 (lower is better)
Translates to: CRGFRTGVQGQPNSLKYPQGLQD*GTGTAK
Trigger: TTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTG...GGGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACATGGGTCTCATACGGGTaGCGGATCATCTCGCTGACT +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTWVSYG*RIISLT
Trigger: AGTCAGCGAGATGATCCGCCACCCGTATGAGACCCA...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp CCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTAGAACTGGAGCCTCCTaGGGTCAGGGCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PWVAWQLEPTVDLCKFTTRTGAS*GQGSRG
Trigger: CCCACGGCTGCCCTGACCCCAGGAGGCTCCAGTTCT...AGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTAGAACTGGAGCCTCCTaGGGTCAGGGCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPRTGAS*GQGSRG
Trigger: CCCACGGCTGCCCTGACCCCAGGAGGCTCCAGTTCT...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATCTTCATGGGCTTGACTaGGGACACCAGGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHLHGLD*GHQVPF
Trigger: GAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAG...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTCTTCATGGGCTTGACTaGGGACACCAGGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: RRAPGWGEMGSDPQVPLPLHGLD*GHQVPF
Trigger: GAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAG...AGGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp CATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTCACTATTCTGAAACTTaGGCCCAAGTAGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HVAGRMGFMGLTGDTRYPHYSET*AQVGPS
Trigger: GCTGGGCCCTACTTGGGCCCAAGTTTCAGAATAGTG...AGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTGGGCCCAGACTCCCTTaGGTGGCTTGGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PWVAWQLEPTVDLCKFTTGPRLP*VAWQLE
Trigger: CTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCC...AGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTGGGATCACTGCCCTCTaGAAAGAGGGACCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLGITAL*KEGPQS
Trigger: GGACTGAGGTCCCTCTTTCCAGAGGGCAGTGATCCC...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTGCTTCAACATCAGCCTaGTCCAGCCTCCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLASTSA*SSLPLS
Trigger: GGAGAGAGGGAGGCTGGACCAGGCTGATGTTGAAGC...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTAGCCCACATGTGGGGTaGGGAGAGAATGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLSPHVG*GENGSG
Trigger: CCCACTTCCATTCTCTCCCCACCCCACATGTGGGCT...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGACTTTATACAGCTTaGGGAAGAGGCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTGLYTA*GRGRAL
Trigger: CAGGGCCCTGCCTCTTCCCCAAGCTGTATAAAGTCC...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAAAAGAGGACAGTGCCTaGGTCCATGTCCCGAATCTT +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVKEDSA*VHVPNL
Trigger: AAGATTCGGGACATGGACTCAGGCACTGTCCTCTTT...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAAGACTGGGGGCTTCTTaGTTTCAAAGAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVRLGAS*FQRGQC
Trigger: GCACTGTCCTCTTTGAAATCAAGAAGCCCCCAGTCT...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp TCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACCAGGTCCCGCCGGTTaGTGGGCAACCGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLGWLGSWSPPWIFVNLQPGPAG*WATVLR
Trigger: TCTCAGAACGGTTGCCCATCAACCGGCGGGACCTGG...TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACTCTTTCTCTACGGATaGTATGGGAATGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQLFLYG*YGNGGR
Trigger: TCTGCCACCATTCCCATATCATCCGTAGAGAAAGAG...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp TTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCAGGGGAACACTATTCTaGAACTTGGGCCCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FLDVEANSLPTTPPHVAGRGTLF*NLGPSR
Trigger: CCTACTTGGGCCCAAGTTTCAGAATAGTGTTCCCCT...GCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACAGAATGGATCCCTGCCTaGTCTAGTCACAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PHGLHGLDWGHQVPFLPTEWIPA*SSHSLD
Trigger: ATCAAGGCTGTGACTAGATCAGGCAGGGATCCATTC...TGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGACTGGTACCCTGCCTTTaGGAACCACCTGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FLPTLTQGPELLENSPSRLVPCL*EPPVKG
Trigger: CCCCTTTACAGGTGGTTCTCAAAGGCAGGGTACCAG...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAGCCCCAGAGCTAAGCTaGATCCTAAATGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPAPELS*ILNAAI
Trigger: AATAGCAGCATTTAGGATTCAGCTTAGCTCTGGGGC...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAAAGGAAGGGGTTCTCATaGAGCCCTTTCCTCTACTTA +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQRKGFS*SPFLYL
Trigger: TAAGTAGAGGAAAGGGCTTCATGAGAACCCCTTCCT...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCTCACCGGTGATCCGCTaGAGCCCCAGCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSSPVIR*SPSTSS
Trigger: GGAGGACGTGCTGGGGCTGCAGCGGATCACCGGTGA...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR GCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCATTTCAAAGAGGACAGTaGCTGAGTCCATGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPFQRGQ*LSPCPE
Trigger: TTCGGGACATGGACTCAGGCACTGTCCTCTTTGAAA...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp CAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTCTTGCTGCTGGGGATaGAGAAGCCAAAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QKSPRVGRNGIRPTSPSPSCCWG*RSQSGS
Trigger: ACTTCCACTTTGGCTTCTGCATCCCCAGCAGCAAGA...GGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301032.8
ENST00000470125.5
ENST00000581945.1
CDS-3UTR GCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAAATGGGAACAACTTCCTaGAGTCTGACCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQMGTTS*SLTCLF
Trigger: GAAGAGACAGGTCAGACTGCAGGAAGTTGTTCCCAT...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp TCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACCGCAAAGCCCCTGCTaGCAGGTCAGCTTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SLGWLGSWSPPWIFVNLQPQSPC*QVSLCG
Trigger: CCCACACAAGCTGACCTGGCAGCAGGGGCTTTGCGG...TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACCAATGTACACAGCATaGATAGATGCCAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQPMYTA*IDARHC
Trigger: ACAGTGCCTGGCATCTATGCATGCTGTGTACATTGG...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGAGTCTGAGAAAGTTCTaGCCCAGAGCTAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLSLRKF*PRAKLN
Trigger: ATTCAGCTTAGCTCTGGGGCAGAACTTTCTCAGACT...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGGCTCAGAACACAACTaGTCTATTCCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVGSEHN*SIPLSH
Trigger: GTGGCTGAGAGGAATAGAGCAGTTGTGTTCTGAGCC...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp CTAGGGCCCAGACTCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTTGGGAACAACTTCCTaGAGTCTAACCTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGPRLPWVAWQLEPTVDLLGTTS*SLTSVS
Trigger: AGAGACTGAGGTTAGACTGCAGGAAGTTGTTCCCAA...AAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCAAAGCGCCCAGCATTaGGGTCCAGGTCCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSQSAQH*GPGPAG
Trigger: ACCGGCGGGACCTGGACCCCAATGCTGGGCGCTTTG...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCCCAGCCAGGCTCTCTACGGATGATATaGGAATGGTGGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: VSYGWRIISLTAREAQPGSLRMI*EWWQTQ
Trigger: CTGTGTCTGCCACCATTCCCATATCATCCGTAGAGA...GCCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATCACTATTCTGAAACTTaGGCCCAAGTAGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHHYSET*AQVGPS
Trigger: GCTGGGCCCTACTTGGGCCCAAGTTTCAGAATAGTG...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTCCCTTGGGTGGCTTaGCAGCTGGAGCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSLPWVA*QLEPTV
Trigger: CACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAG...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTGTCCAGCTCCTACCATaGGCTGCAATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLVQLLP*AAISAS
Trigger: ACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGAC...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTTGGGTCTCATACGGGTaGCGGATCATCTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLWVSYG*RIISLI
Trigger: GATCAGCGAGATGATCCGCCACCCGTATGAGACCCA...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335765.9
ENST00000484980.5
CDS-3UTR CCA 90 bp ACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTGGTACACCCCCAGTGTaGAAGAGACATAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: TQKSPRVGRNGIRPTSPSGTPPV*KRHNSA
Trigger: GGCGGAGTTATGTCTCTTCCACACTGGGGGTGTACC...AGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS-3UTR CCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACACCATCTTCTCATCCCTaGGATCACTGCCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTPSSHP*DHCPLE
Trigger: TTCCAGAGGGCAGTGATCCCAGGGATGAGAAGATGG...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTCCATCTTCTCATCCCTaGGATCACTGCCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPPSSHP*DHCPLE
Trigger: TTCCAGAGGGCAGTGATCCCAGGGATGAGAAGATGG...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp TTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCGGAGCCTCTCTCATTTaGGAACAACTTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FLDVEANSLPTTPPHVAGGASLI*EQLPAV
Trigger: GACTGCAGGAAGTTGTTCCCAAATGAGAGAGGCTCC...GCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTAAAGAGGACAGTGCCTaGGTCCATGTCCCGAATCTT +
Preference number: 4 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPKEDSA*VHVPNL
Trigger: AAGATTCGGGACATGGACTCAGGCACTGTCCTCTTT...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACATAGACTGGGGGCTTCTTaGTTTCAAAGAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: RMGFMGLTGDTRYPSSQHRLGAS*FQRGQC
Trigger: GCACTGTCCTCTTTGAAATCAAGAAGCCCCCAGTCT...ATGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTGGAGGAAGGCAGGCGTaGACTGGTAGCGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPGGRQA*TGSGQS
Trigger: GCTTTGTCCGCTACCAGTTCACGCCTGCCTTCCTCC...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTGAATGGATCCCTGCCTaGTCTAGTCACAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPEWIPA*SSHSLD
Trigger: ATCAAGGCTGTGACTAGATCAGGCAGGGATCCATTC...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTGAAAGCCAAGTTGTTTaGCTCCAGGCAGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPESQVV*LQAAAM
Trigger: CATAGCTGCTGCCTGGAGTCAAACAACTTGGCTTTC...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCAAAGCCTCTGCTATaGGGTTTCCTAGCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLPKPLL*GFLALV
Trigger: AACGAGGGCTAGGAAACCTCATAGCAGAGGCTTTGG...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGGCACCTTTCATCCTTTaGGGCTCATCCAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQAPFIL*GSSKAS
Trigger: AGAGGCTTTGGATGAGCCTCAAAGGATGAAAGGTGC...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp GCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCTCACCTTCATGGCCTTaGGGGGCCGAGGCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: AWQLEPTVDLCKFTTLNGSPSWP*GAEARL
Trigger: CAGGCGAGCCTCGGCCCCGCAAGGCCATGAAGGTGA...GCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR GCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCGGGCCGCAAAGCCCCTaGTGCCAGGTCAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSGPQSP*CQVSLC
Trigger: ACACAAGCTGACCTGGCAGCAGGGGCTTTGCGGCCC...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTTTCCGCAGGCGGCTGTaGTATGGGGGCCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETFRRRL*YGGHAL
Trigger: CAGAGCGTGGCCCCCATACCACAGCCGCCTGCGGAA...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR CCA 90 bp CACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCATGATATGGGAATGGTaGCAGACACAGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HRRAPGWGEMGSDPQVPLMIWEW*QTQKSP
Trigger: GGGGCTCTTCTGTGTCTGCCACCATTCCCATATCAT...GAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301032.8
ENST00000470125.5
ENST00000581945.1
CDS-3UTR CCA 90 bp CACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCGGATGATATGGGAATaGTGGCAGACACAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HRRAPGWGEMGSDPQVPLRMIWE*WQTQKS
Trigger: GCTCTTCTGTGTCTGCCACCATTCCCATATCATCCG...GAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301032.8
ENST00000470125.5
ENST00000581945.1
CDS-3UTR CCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCACTATTCTGAAACTTaGGCCCAAGTAGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLHYSET*AQVGPS
Trigger: GCTGGGCCCTACTTGGGCCCAAGTTTCAGAATAGTG...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTGGGCCCAGACTCCCTTaGGTGGCTTGGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETGPRLP*VAWQLE
Trigger: CTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCC...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTCCCGCAGAAAACTATATACAGTTaGTCCAGCTCCTACCATGGG +
Preference number: 4 (lower is better)
Translates to: PQGGEKWDQTHKSLSLPQKTIYS*SSSYHG
Trigger: CCCATGGTAGGAGCTGGACCAACTGTATATAGTTTT...CTGCGGGAGGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTAAAACTATATACAGTTaGTCCAGCTCCTACCATGGG +
Preference number: 4 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLKTIYS*SSSYHG
Trigger: CCCATGGTAGGAGCTGGACCAACTGTATATAGTTTT...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCACCATTCTCCAACTTTTaGAGCCTCTCTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPPFSNF*SLSHLG
Trigger: TCCCAAATGAGAGAGGCTCCAAAAGTTGGAGAATGG...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGAGGAAGTCGAAGCTTTTaGGTAGCTGGTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: FLPTLTQGPELLENSPSRGSRSF*VAGCGS
Trigger: ACTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCC...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp ACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTGAATGGATCCCTGCCTaGTCTAGTCACAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TQKSPRVGRNGIRPTSPSEWIPA*SSHSLD
Trigger: ATCAAGGCTGTGACTAGATCAGGCAGGGATCCATTC...AGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTGAATGGATCCCTGCCTaGTCTAGTCACAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLEWIPA*SSHSLD
Trigger: ATCAAGGCTGTGACTAGATCAGGCAGGGATCCATTC...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCCCCCTCCCCTGCCCTaGAAGCCAAGTTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: PWVAWQLEPTVDLCKFTTPPPLP*KPSCLT
Trigger: AGTCAAACAACTTGGCTTTCAGGGCAGGGGAGGGGG...AGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp GACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTTTCAAAGAGGACAGTaGCTGAGTCCATGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: DTEEPQGGEKWDQTHKSLFQRGQ*LSPCPE
Trigger: TTCGGGACATGGACTCAGGCACTGTCCTCTTTGAAA...GAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp GTCAGACTGGGTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCTTTCAAAGAGGACAGTaGCTGAGTCCATGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: VRLGLIRVADHLADCKRGFQRGQ*LSPCPE
Trigger: TTCGGGACATGGACTCAGGCACTGTCCTCTTTGAAA...GCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGACCCAGTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp GGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCCAGCCTTCTTGCTGCTGGGGATaGAGAAGCCAAAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GFRTGVQGQPNSLKYPQPSCCWG*RSQSGS
Trigger: ACTTCCACTTTGGCTTCTGCATCCCCAGCAGCAAGA...AGGCTGGGGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp CTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGCTGTAGGAATAGTCTaGTTTATTGTGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: LPTTPPHVAGRMGFMGLTAVGIV*FIVHHQ
Trigger: CTGGTGATGCACAATAAAGCAGACTATTCCTACAGC...AGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCAGGGACCTCAGTCCCTaGCCTTGGGGTACACCCCCA +
Preference number: 4 (lower is better)
Translates to: AWQLEPTVDLCKFTTLNGRDLSP*PWGTPP
Trigger: TGGGGGTGTACCCCAAGGGCAGGGACTGAGGTCCCT...GCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGGGAGGAGGCCAACTTTaGTCTCATCCTTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQGGGQL*SHPLLI
Trigger: GATCAACAAAGGATGAGAGCAAAGTTGGCCTCCTCC...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCTTGAGGGGTGAGCGTTaGGGAGGTCACAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSLRGER*GGHSSQ
Trigger: CTGGGAGCTGTGACCTCCCCAACGCTCACCCCTCAA...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGATTTACAACTCTAAATaGCCTGAAGGTAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGIYNSK*PEGSGQ
Trigger: CTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAAT...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGAGCTGGAGCCCACCGTaGATCTTTGTAAATTTACAA +
Preference number: 4 (lower is better)
Translates to: ANSLPTTPPHVAGRMGFMSWSPP*IFVNLQ
Trigger: TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCT...CATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CTGCAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCGTCACTGTCCTTCTCTaGAGGATACTCCTACCCTCA +
Preference number: 4 (lower is better)
Translates to: LQGLQDWGTGTAKQPEISVTVLL*RILLPS
Trigger: TGAGGGTAGGAGTATCCTCCAGAGAAGGACAGTGAC...GGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS-3UTR CCA 90 bp GACACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCGCCTCTCTTCTCATATaGGAACAACTTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: DTEEPQGGEKWDQTHKSLASLLI*EQLPAV
Trigger: GACTGCAGGAAGTTGTTCCCATATGAGAAGAGAGGC...GAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS-3UTR CCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTCTCAGTCCCTGCCCTTaGGGTACACCCCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETLSPCP*GTPPVW
Trigger: CCACACTGGGGGTGTACCCCAAGGGCAGGGACTGAG...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGCAGGGTGGAAATCCCTaGAACTCTGTTCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQQGGNP*NSVLNS
Trigger: GGAATTGAGAACAGAGTTCCAGGGATTTCCACCCTG...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCCCTGGGGCCCAGCATaGACTTTATACAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PWVAWQLEPTVDLCKFTTPWGPA*TLYSLG
Trigger: CCCCAAGCTGTATAAAGTCCATGCTGGGCCCCAGGG...AGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp CTGCAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCTCTTTCTCTACGGATaGTATGGGAATGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LQGLQDWGTGTAKQPEISLFLYG*YGNGGR
Trigger: TCTGCCACCATTCCCATATCATCCGTAGAGAAAGAG...GGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR TCA 90 bp GCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCTGGGCTTCATGGGCTTaGCTGGGGACACCAGGTACC +
Preference number: 4 (lower is better)
Translates to: AWQLEPTVDLCKFTTLNGWASWA*LGTPGT
Trigger: GGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCA...GCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCAACCTGTCTCTTCTACTaGAACTCAGTGTATCAACTT +
Preference number: 4 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPTCLFY*NSVYQL
Trigger: AAGTTGATACACTGAGTTGCAGTAGAAGAGACAGGT...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTGATGACCCCCTCCCCTaGCCTGAAAGCCAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPDDPLP*PESQVV
Trigger: AACAACTTGGCTTTCAGGGCAGGGGAGGGGGTCATC...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CTGCAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCTCTCTACGGATGATATaGGAATGGTGGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: LQGLQDWGTGTAKQPEISSLRMI*EWWQTQ
Trigger: CTGTGTCTGCCACCATTCCCATATCATCCGTAGAGA...GGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGTTGAGGGGTGAGCGTTaGGGAGGTCACAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLLRGER*GGHSSQ
Trigger: CTGGGAGCTGTGACCTCCCCAACGCTCACCCCTCAA...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAATTTACAACTCTAAATaGCCTGAAGGTAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVIYNSK*PEGSGQ
Trigger: CTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAAT...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAAGCTGGAGCCCACCGTaGATCTTTGTAAATTTACAA +
Preference number: 4 (lower is better)
Translates to: QAFLDVEANSLPTTPPHVSWSPP*IFVNLQ
Trigger: TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCT...TACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTAGCTGGAGCCCACCGTaGATCTTTGTAAATTTACAA +
Preference number: 4 (lower is better)
Translates to: HVAGRMGFMGLTGDTRYPSWSPP*IFVNLQ
Trigger: TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCT...AGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACAAGCTGGAGCCCACCGTaGATCTTTGTAAATTTACAA +
Preference number: 4 (lower is better)
Translates to: PHGLHGLDWGHQVPFLPTSWSPP*IFVNLQ
Trigger: TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCT...TGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGGCCCAGACTCCCTTaGGTGGCTTGGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVGPRLP*VAWQLE
Trigger: CTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCC...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTTGGGTCTCATACGGGTaGCGGATCATCTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: PWVAWQLEPTVDLCKFTTWVSYG*RIISLI
Trigger: GATCAGCGAGATGATCCGCCACCCGTATGAGACCCA...AGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335765.9
ENST00000484980.5
CDS-3UTR CCA 90 bp GCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCGGACTTTCCCTGATATaGGTGGGGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AWQLEPTVDLCKFTTLNGGLSLI*VGLGQV
Trigger: CACCTGCCCCAGCCCCACCCATATCAGGGAAAGTCC...GCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTGGGAGAGAATGGAAGTaGGCAACCCCTATCTCACCC +
Preference number: 4 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPGREWK*ATPISP
Trigger: GGGTGAGATAGGGGTTGCCCACTTCCATTCTCTCCC...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp GATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGCAGGGGACAGCCAGGTCCCGCCGGTTaGTGGGCAACCGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DLCKFTTLNGLKVVGRGQPGPAG*WATVLR
Trigger: TCTCAGAACGGTTGCCCATCAACCGGCGGGACCTGG...CTGTCCCCTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTGACAAGGCCACCTCCTaGACACTCTCTCTCCCACTC +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETDKATS*TLSLPL
Trigger: GAGTGGGAGAGAGAGTGTTCAGGAGGTGGCCTTGTC...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGCTGTAGGAATAGTCTaGTTTATTGTGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTAVGIV*FIVHHQ
Trigger: CTGGTGATGCACAATAAAGCAGACTATTCCTACAGC...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAATTTACAACTCTAAATaGCCTGAAGGTAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTIYNSK*PEGSGQ
Trigger: CTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAAT...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGGAGTGCCATCCTACTaGTCTCTGGGGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKGVPSY*SLGARE
Trigger: TTCCCTGGCCCCCAGAGACCAGTAGGATGGCACTCC...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGCTCCACAGCTCTGTCTaGGAGTCCGGTGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLLHSSV*ESGVLL
Trigger: CAGCAGAACACCGGACTCCCAGACAGAGCTGTGGAG...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAGAAAGGATGAGGCCTaGGACCCAGGGTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLRKDEA*DPGSGQ
Trigger: CTGACCTGACCCTGGGTCCCAGGCCTCATCCTTTCT...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTTTGTTGATCTCCAAATaGGAGGAAGTCTTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPLLISK*EEVLAS
Trigger: GCTTGCTAAGACTTCCTCCCATTTGGAGATCAACAA...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp TCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAAAAAGAGGACAGTGCCTaGGTCCATGTCCCGAATCTT +
Preference number: 4 (lower is better)
Translates to: SLGWLGSWSPPWIFVNLQKEDSA*VHVPNL
Trigger: AAGATTCGGGACATGGACTCAGGCACTGTCCTCTTT...TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTAGACTGGGGGCTTCTTaGTTTCAAAGAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPRLGAS*FQRGQC
Trigger: GCACTGTCCTCTTTGAAATCAAGAAGCCCCCAGTCT...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGCTCCCACTCTGGAGTTaGGGGTCCTCATTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKLPLWS*GSSFWP
Trigger: AGGCCAGAATGAGGACCCTCAACTCCAGAGTGGGAG...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTTCTTGCTGCTGGGGATaGAGAAGCCAAAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPSCCWG*RSQSGS
Trigger: ACTTCCACTTTGGCTTCTGCATCCCCAGCAGCAAGA...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGCCTTCTTCACCTTCATaGCCTTGCGGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVPSSPS*PCGAEA
Trigger: AGCCTCGGCCCCGCAAGGCCATGAAGGTGAAGAAGG...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR CCA 90 bp CCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCGGATGATATGGGAATaGTGGCAGACACAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PWVAWQLEPTVDLCKFTTRMIWE*WQTQKS
Trigger: GCTCTTCTGTGTCTGCCACCATTCCCATATCATCCG...AGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTTGGGTCTCATACGGGTaGCGGATCATCTCGCTGACT +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETWVSYG*RIISLT
Trigger: AGTCAGCGAGATGATCCGCCACCCGTATGAGACCCA...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTCACACAGCTCTGTCTTaGGAGAGTCACTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPHTALS*ESHCPS
Trigger: AGAAGGACAGTGACTCTCCCAAGACAGAGCTGTGTG...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGCAAGGGGTGCCAGGGTaGAAATCCCTGGAACTCTGT +
Preference number: 4 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLQGVPG*KSLELC
Trigger: ACAGAGTTCCAGGGATTTCCACCCTGGCACCCCTTG...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGAGGGCAGGTTGCTGGTaGATGTGGCCAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVRAGCW*MWPRWR
Trigger: TCTCCACCTTGGCCACATTCACCAGCAACCTGCCCT...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGGCAACAAAAAGAGCTaGGAGGTGCAGGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKGNKKS*EVQGGT
Trigger: AGTCCCTCCCTGCACCTCTCAGCTCTTTTTGTTGCC...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTACTCCCAGAAGACCCTaGCCGCGCACTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSTPRRP*PRTQLL
Trigger: GAGGAGCTGAGTGCGCGGGCAGGGTCTTCTGGGAGT...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGCTCCTACCATGGGCTaGAATCTCAGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVAPTMG*NLSQSL
Trigger: GAGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGC...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTACCTGTCTCTTCTACTaGAACTCAGTGTATCAACTT +
Preference number: 4 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLTCLFY*NSVYQL
Trigger: AAGTTGATACACTGAGTTGCAGTAGAAGAGACAGGT...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTACAGGGGATAAGGAGTaGCATCCTACTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETTGDKE*HPTGLW
Trigger: CCAGAGACCAGTAGGATGGCACTCCTTATCCCCTGT...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTCTTACCCTTCACAGATaGCCCATCTCTAAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPLTLHR*PISKGY
Trigger: ATAGCCCTTAGAGATGGGGCATCTGTGAAGGGTAAG...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGAGAAGAGCCCCAGGGTaGGGAGAAATGGGATCAGAC +
Preference number: 4 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKRRAPG*GEMGSD
Trigger: GTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTTGTCTTGGCCCCTCATaGGGAGGGATGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSCLGPS*GGMGLG
Trigger: GCCTAGCCCCATCCCTCCCCATGAGGGGCCAAGACA...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTCAGGGCCCAGTAATCTaGGAACAGCAAACCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETQGPVI*EQQTSD
Trigger: GTCTGAGGTTTGCTGTTCCCAGATTACTGGGCCCTG...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTGGAAGTCGAAGCTTTTaGGTAGCTGGTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETGSRSF*VAGCGS
Trigger: ACTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCC...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCAGGGGAACACTATTCTaGAACTTGGGCCCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: AWQLEPTVDLCKFTTLNGRGTLF*NLGPSR
Trigger: CCTACTTGGGCCCAAGTTTCAGAATAGTGTTCCCCT...GCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCAACCTCAGACCTGCATaGTTAGGGTCAGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: AWQLEPTVDLCKFTTLNGNLRPA*LGSEET
Trigger: GGTCTCTTCTGACCCTAATCATGCAGGTCTGAGGTT...GCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp GATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGCAGGGGACAGAGCAGCAACTTCAAGTaGTCAGGGAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: DLCKFTTLNGLKVVGRGQSSNFK*SGRPWQ
Trigger: TTGCCAGGGCCTCCCTGAGCACTTGAAGTTGCTGCT...CTGTCCCCTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGATGATATGGGAATGGTaGCAGACACAGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLMIWEW*QTQKSP
Trigger: GGGGCTCTTCTGTGTCTGCCACCATTCCCATATCAT...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTATGATATGGGAATGGTaGCAGACACAGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETMIWEW*QTQKSP
Trigger: GGGGCTCTTCTGTGTCTGCCACCATTCCCATATCAT...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTTTGAGGGGTGAGCGTTaGGGAGGTCACAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSLRGER*GGHSSQ
Trigger: CTGGGAGCTGTGACCTCCCCAACGCTCACCCCTCAA...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGTCCAGCTCCTACCATaGGCTGCAATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVVQLLP*AAISAS
Trigger: ACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGAC...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTGGACTTTCCCTGATATaGGTGGGGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSGLSLI*VGLGQV
Trigger: CACCTGCCCCAGCCCCACCCATATCAGGGAAAGTCC...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCCAGAGCCTGGGATATaGCAGGTGGGAGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSPEPGI*QVGGGQ
Trigger: TTGGCCTCCTCCCACCTGCCATATCCCAGGCTCTGG...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTGATCATCTCGCTGACTaGAAGAGAGGCCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSDHLAD*KRGPAR
Trigger: CCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATC...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCATCCCTGGGATCACTaGCCTCTGGAAAGAGGGACC +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSHPWDH*PLERGT
Trigger: GGTCCCTCTTTCCAGAGGGCAGTGATCCCAGGGATG...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGAGTCCGGTGTTCTGCTaGTTTGGAAGCTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVSPVFC*FGSSRA
Trigger: AGCCCTAGAGCTTCCAAAGCAGCAGAACACCGGACT...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGAACCCTCACAGCTCTTaGAGCAGCAACTTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKNPHSS*SSNFKC
Trigger: GCACTTGAAGTTGCTGCTGCAAGAGCTGTGAGGGTT...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTCACTGTCCTTCTCTaGAGGATACTCCTACCCTCA +
Preference number: 4 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKVTVLL*RILLPS
Trigger: TGAGGGTAGGAGTATCCTCCAGAGAAGGACAGTGAC...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR TCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGAGGGGAACACTATTCTaGAACTTGGGCCCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVRGTLF*NLGPSR
Trigger: CCTACTTGGGCCCAAGTTTCAGAATAGTGTTCCCCT...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGTCTTGCTGCTGGGGATaGAGAAGCCAAAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVSCCWG*RSQSGS
Trigger: ACTTCCACTTTGGCTTCTGCATCCCCAGCAGCAAGA...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCGCTGTAGGAATAGTCTaGTTTATTGTGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSAVGIV*FIVHHQ
Trigger: CTGGTGATGCACAATAAAGCAGACTATTCCTACAGC...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGATGGGAACAACTTCCTaGAGTCTGACCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKMGTTS*SLTCLF
Trigger: GAAGAGACAGGTCAGACTGCAGGAAGTTGTTCCCAT...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCTCTCCATTGATGCCTaGTTGGGCAAGGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSLSIDA*LGKGAQ
Trigger: CTGAGCTCCCTTGCCCAAGCAGGCATCAATGGAGAG...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGTCTGTTCTCAATTCCTaGACAGGAAGGGGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLSVLNS*TGRGSH
Trigger: ATGAGAACCCCTTCCTGTGCAGGAATTGAGAACAGA...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp GATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGCAGGGGACAGCACACAGCTCTGTCTTaGGAGAGTCACTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DLCKFTTLNGLKVVGRGQHTALS*ESHCPS
Trigger: AGAAGGACAGTGACTCTCCCAAGACAGAGCTGTGTG...CTGTCCCCTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGTGGTGGTACATGAGCTaGAAGCTCCCTCTAGTTGCA +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVWWYMS*KLPLVA
Trigger: TGCAACTAGAGGGAGCTTCCAGCTCATGTACCACCA...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTTTAGGAGACAAATGGTaGTACATGAGCTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GSLPDLVTALIGEHYSETLGDKW*YMSWKL
Trigger: GAGCTTCCAGCTCATGTACCACCATTTGTCTCCTAA...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR TCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGCTCTCATCCTTTGTTaGTCTCCAAATGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVALILC*SPNGRK
Trigger: CTTCCTCCCATTTGGAGATCAACAAAGGATGAGAGC...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR GCA 90 bp GATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGCAGGGGACAGTTTCAAAGAGGACAGTaGCTGAGTCCATGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: DLCKFTTLNGLKVVGRGQFQRGQ*LSPCPE
Trigger: TTCGGGACATGGACTCAGGCACTGTCCTCTTTGAAA...CTGTCCCCTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR GCA 90 bp ATATCCCCAGCCTCTTTCTCTACGGATGATATGGGAATGGTGGCAGACACAGAAGCTGTAGGAATAGTCTaGTTTATTGTGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: ISPASFSTDDMGMVADTEAVGIV*FIVHHQ
Trigger: CTGGTGATGCACAATAAAGCAGACTATTCCTACAGC...TTCTGTGTCTGCCACCATTCCCATATCATCCGTAGAGAAAGAGGCTGGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR GCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGGAAGCTCCCTCTAGTTaGAAAATAAACCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLEAPSS*KINPQS
Trigger: ACTTTGGGGGTTTATTTTGCAACTAGAGGGAGCTTC...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp GCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCATTTACAACTCTAAATaGCCTGAAGGTAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AWQLEPTVDLCKFTTLNGIYNSK*PEGSGQ
Trigger: CTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAAT...GCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp TGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGACACAGACAATTATATaGCAGAGTTGGAACTCCAAC +
Preference number: 4 (lower is better)
Translates to: WQLEPTVDLCKFTTLNGLTQTII*QSWNSN
Trigger: GTTGGAGTTCCAACTCTGCCATATAATTGTCTGTGT...CAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp GATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGCAGGGGACAGAATAGCTTCCTAAGCTaGATTCAGGGCCCAGTAATC +
Preference number: 4 (lower is better)
Translates to: DLCKFTTLNGLKVVGRGQNSFLS*IQGPVI
Trigger: GATTACTGGGCCCTGAATCCAGCTTAGGAAGCTATT...CTGTCCCCTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CCA 90 bp GATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGCAGGGGACAGAAAACTATATACAGTTaGTCCAGCTCCTACCATGGG +
Preference number: 4 (lower is better)
Translates to: DLCKFTTLNGLKVVGRGQKTIYS*SSSYHG
Trigger: CCCATGGTAGGAGCTGGACCAACTGTATATAGTTTT...CTGTCCCCTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGAAAACTATATACAGTTaGTCCAGCTCCTACCATGGG +
Preference number: 4 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVKTIYS*SSSYHG
Trigger: CCCATGGTAGGAGCTGGACCAACTGTATATAGTTTT...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTGCCTCTCTTCTCATATaGGAACAACTTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSASLLI*EQLPAV
Trigger: GACTGCAGGAAGTTGTTCCCATATGAGAAGAGAGGC...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CCA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTAAATTAGGAGACAAATaGTGGTACATGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSKLGDK*WYMSWK
Trigger: CTTCCAGCTCATGTACCACCATTTGTCTCCTAATTT...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 90 bp CGCTGCAGCCCCAGCACGTCCTCCGGCCCGATCGGCTGCTTCCTCTaGAGCGGCCCCGGCCTGGGCCCTGGGCCTGCGTCCGGCTCCGAC +
Preference number: 5 (lower is better)
Translates to: RCSPSTSSGPIGCFL*SGPGLGPGPASGSD
Trigger: GTCGGAGCCGGACGCAGGCCCAGGGCCCAGGCCGGGGCCGCTGCAGAGGAAGCAGCCGATCGGGCCGGAGGACGTGCTGGGGCTGCAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000444148.1
ENST00000578434.1
ENST00000581945.1
CDS CCA 90 bp GCTCCGACTCGGACCCAGATTCGGATTCCGCAGGCGGCTGTGGTATaGGGGCCACGCTCTGGCCCGAGGGCCCCGGAGCGGACTCCGTCG +
Preference number: 5 (lower is better)
Translates to: APTRTQIRIPQAAVV*GPRSGPRAPERTPS
Trigger: CGACGGAGTCCGCTCCGGGGCCCTCGGGCCAGAGCGTGGCCCCCATACCACAGCCGCCTGCGGAATCCGAATCTGGGTCCGAGTCGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000444148.1
ENST00000578434.1
ENST00000581945.1
CDS CCA 90 bp GTCCGGCTCCGACTCGGACCCAGATTCGGATTCCGCAGGCGGCTGTaGTATGGGGGCCACGCTCTGGCCCGAGGGCCCCGGAGCGGACTC +
Preference number: 5 (lower is better)
Translates to: VRLRLGPRFGFRRRL*YGGHALARGPRSGL
Trigger: GAGTCCGCTCCGGGGCCCTCGGGCCAGAGCGTGGCCCCCATACCACAGCCGCCTGCGGAATCCGAATCTGGGTCCGAGTCGGAGCCGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000444148.1
ENST00000578434.1
ENST00000581945.1
CDS-3UTR CAA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGTTCACCTTCATGGCCTaGCGGGGCCGAGGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLFTFMA*RGRGSP
Trigger: AGGCGAGCCTCGGCCCCGCAAGGCCATGAAGGTGAA...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000335765.9
CDS-3UTR CAA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGAGGGCCCAGACTCCCTaGGGTGGCTTGGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLRAQTP*GGLAAG
Trigger: TCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCT...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS CCA 90 bp AGGTCCCGCCGGTTGATGGGCAACCGTTCTGCAATGTACCCCAGCTaGGGCTCAGTGGGCTTCAGGCTGGGCCCTTGTCCACCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: RSRRLMGNRSAMYPS*GSVGFRLGPCPPRV
Trigger: AACCCTGGGTGGACAAGGGCCCAGCCTGAAGCCCACTGAGCCCCAGCTGGGGTACATTGCAGAACGGTTGCCCATCAACCGGCGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487844.1
CDS-3UTR CAA 90 bp GTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCCCAGCCAGGCTTCACCTTCATGGCCTaGCGGGGCCGAGGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: VSYGWRIISLTAREAQPGFTFMA*RGRGSP
Trigger: AGGCGAGCCTCGGCCCCGCAAGGCCATGAAGGTGAA...GCCTGGCTGGGCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301032.8
CDS-3UTR CAA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGTCCAGGTCCCGCCGGTaGATGGGCAACCGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLSRSRR*MGNRSE
Trigger: CTCAGAACGGTTGCCCATCAACCGGCGGGACCTGGA...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp TTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCACAAAGCGCCCAGCATaGGGGTCCAGGTCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: FLDVEANSLPTTPPHVAGTKRPA*GSRSRR
Trigger: CCGGCGGGACCTGGACCCCAATGCTGGGCGCTTTGT...GCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS GCA 90 bp GGGCCTCAAAGCGCTCTGGAGACTCCACAGCTACAGGGCTATGGTTaGAGCTGCTGCCGCACGTACCTCCACGCTGGGAAAAGGGGACGG +
Preference number: 5 (lower is better)
Translates to: GPQSALETPQLQGYG*SCCRTYLHAGKRGR
Trigger: CCGTCCCCTTTTCCCAGCGTGGAGGTACGTGCGGCAGCAGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAGAGCGCTTTGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS CCA 90 bp GGACGGGCCTCAAAGCGCTCTGGAGACTCCACAGCTACAGGGCTATaGTTGCAGCTGCTGCCGCACGTACCTCCACGCTGGGAAAAGGGG +
Preference number: 5 (lower is better)
Translates to: GRASKRSGDSTATGL*LQLLPHVPPRWEKG
Trigger: CCCCTTTTCCCAGCGTGGAGGTACGTGCGGCAGCAGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAGAGCGCTTTGAGGCCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS-3UTR CAA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGTCCAGGTCCCGCCGGTaGATGGGCAACCGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGSRSRR*MGNRSE
Trigger: CTCAGAACGGTTGCCCATCAACCGGCGGGACCTGGA...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp GGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAAGCAAAGGTCAGGAGCTaGAGTCCCGCCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GRMGFMGLTGDTRYPSSQAKVRS*SPATAG
Trigger: CCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTGC...TTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CAA 90 bp CCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACAACTCCCTTGGGTGGCTaGGCAGCTGGAGCCCACCGT +
Preference number: 5 (lower is better)
Translates to: PHGLHGLDWGHQVPFLPTTPLGG*AAGAHR
Trigger: ACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGT...TGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAACAAGGGCCCAGACTCCCTaGGGTGGCTTGGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: PHGLHGLDWGHQVPFLPTRAQTP*GGLAAG
Trigger: TCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCT...TGTTGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTATGGGCTTCATGGGCTaGACTGGGGACACCAGGTAC +
Preference number: 5 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLMGFMG*TGDTRY
Trigger: GTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCAT...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAACTCCCTTGGGTGGCTaGGCAGCTGGAGCCCACCGT +
Preference number: 5 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTTPLGG*AAGAHR
Trigger: ACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGT...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTCCTCAGTCCCTGCCCTaGGGGTACACCCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPPQSLP*GYTPSV
Trigger: CACACTGGGGGTGTACCCCAAGGGCAGGGACTGAGG...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCTGGGGGCCAGGGCAGGTaGCTGGTGAATGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RAQLSCPEVLTAPLTGLPGGQGR*LVNVAK
Trigger: CTTGGCCACATTCACCAGCAACCTGCCCTGGCCCCC...AGGAAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 90 bp CCAACTGGCTTCAACATCAGCCTGGTCCAGCCTCCCTCTCTCCATTaGTGCCTGCTTGGGCAAGGGAGCTCAGTACTCTGGGGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PTGFNISLVQPPSLH*CLLGQGSSVLWGPS
Trigger: GCTGGGCCCCCAGAGTACTGAGCTCCCTTGCCCAAGCAGGCATCAATGGAGAGAGGGAGGCTGGACCAGGCTGATGTTGAAGCCAGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 90 bp AGGCCCTGGCAACAAAAAGAGCTGAGAGGTGCAGGGAGGGACTCGTaGTGTCAGCCTGCACAGCATCACATCCTCCCCTGGTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: RPWQQKELRGAGRDS*CQPAQHHILPWWPT
Trigger: TGTGGGCCACCAGGGGAGGATGTGATGCTGTGCAGGCTGACAGCACGAGTCCCTCCCTGCACCTCTCAGCTCTTTTTGTTGCCAGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp ACTGCAAGAGAGGCCCAGCCAGGCCGGGCAAAGGTCAGGAGCTTGAGTCCCGCCTCGATCATGCGGAAGTaGTTGACAGGCTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: TAREAQPGRAKVRSLSPASIMRK*LTGLSP
Trigger: GGGAGACAAGCCTGTCAACAACTTCCGCATGATCGA...GGCGGGACTCAAGCTCCTGACCTTTGCCCGGCCTGGCTGGGCCTCTCTTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CAA 90 bp GTCAGACTGGGTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCGCAAAGGTCAGGAGCTaGAGTCCCGCCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: VRLGLIRVADHLADCKRGAKVRS*SPATAG
Trigger: CCCTGCAGTGGCGGGACTCAAGCTCCTGACCTTTGC...GCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGACCCAGTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CAA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCAATGGGCTTCATGGGCTaGACTGGGGACACCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPMGFMG*TGDTRY
Trigger: GTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCAT...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGAACTCCCTTGGGTGGCTaGGCAGCTGGAGCCCACCGT +
Preference number: 5 (lower is better)
Translates to: FLPTLTQGPELLENSPSRTPLGG*AAGAHR
Trigger: ACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGT...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTAGGGCCCAGACTCCCTaGGGTGGCTTGGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLRAQTP*GGLAAG
Trigger: TCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCT...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTCCACACAGCTCTGTCTaGGGAGAGTCACTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLPHSSV*GESLSF
Trigger: GAAGGACAGTGACTCTCCCAAGACAGAGCTGTGTGG...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CTGCAGGGGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCCTCAGTCCCTGCCCTaGGGGTACACCCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LQGLQDWGTGTAKQPEISPQSLP*GYTPSV
Trigger: CACACTGGGGGTGTACCCCAAGGGCAGGGACTGAGG...GGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCCCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS-3UTR CAA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGTCCATTGATGCCTGCTaGGGCAAGGGAGCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLSIDAC*GKGAQY
Trigger: GTACTGAGCTCCCTTGCCCAAGCAGGCATCAATGGA...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 90 bp TCATCCCTGGGATCACTGCCCTCTGGAAAGAGGGACCTCAGTCCCTaGCCTTGGGGTACACCCCCAGTGTGGAAGAGACATAACTCCGCC +
Preference number: 5 (lower is better)
Translates to: SSLGSLPSGKRDLSP*PWGTPPVWKRHNSA
Trigger: GGCGGAGTTATGTCTCTTCCACACTGGGGGTGTACCCCAAGGGCAGGGACTGAGGTCCCTCTTTCCAGAGGGCAGTGATCCCAGGGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS GCA 90 bp GGCTGTCTCCCCTCCACAGCTCTGTCTGGGAGTCCGGTGTTCTGCTaGTTTGGAAGCTCTAGGGCTCAGGTCCACTCCAATACATGCCCC +
Preference number: 5 (lower is better)
Translates to: GCLPSTALSGSPVFC*FGSSRAQVHSNTCP
Trigger: GGGGCATGTATTGGAGTGGACCTGAGCCCTAGAGCTTCCAAAGCAGCAGAACACCGGACTCCCAGACAGAGCTGTGGAGGGGAGACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 90 bp ACAAAAAGAGCTGAGAGGTGCAGGGAGGGACTCGTGCTGTCAGCCTaGACAGCATCACATCCTCCCCTGGTGGCCCACAGAGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: TKRAERCREGLVLSA*TASHPPLVAHRGLE
Trigger: TTCCAGGCCTCTGTGGGCCACCAGGGGAGGATGTGATGCTGTGCAGGCTGACAGCACGAGTCCCTCCCTGCACCTCTCAGCTCTTTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 90 bp GCAGCCATCTGGTACCCTGGGGCCCAGCATGGACTTTATACAGCTTaGGGAAGAGGCAGGGCCCTGAGTCTACTACAGCCCACATGTGGG +
Preference number: 5 (lower is better)
Translates to: AAIWYPGAQHGLYTA*GRGRALSLLQPTCG
Trigger: CCCACATGTGGGCTGTAGTAGACTCAGGGCCCTGCCTCTTCCCCAAGCTGTATAAAGTCCATGCTGGGCCCCAGGGTACCAGATGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 90 bp TCAGCCCCTCTCTTCATTAGTGCAGGGACGGGCCTCAAAGCGCTCTaGAGACTCCACAGCTACAGGGCTATGGTTGCAGCTGCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: SAPLFISAGTGLKAL*RLHSYRAMVAAAAA
Trigger: TGCGGCAGCAGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAGAGCGCTTTGAGGCCCGTCCCTGCACTAATGAAGAGAGGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS-3UTR CAA 90 bp GGCTTCAGGACTGGGGTACAGGGACAGCCAAACAGCCTGAAATATCCCCAGCCTTCCAGGTCCCGCCGGTaGATGGGCAACCGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: GFRTGVQGQPNSLKYPQPSRSRR*MGNRSE
Trigger: CTCAGAACGGTTGCCCATCAACCGGCGGGACCTGGA...AGGCTGGGGATATTTCAGGCTGTTTGGCTGTCCCTGTACCCCAGTCCTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CAA 90 bp GTCAGACTGGGTCTCATACGGGTGGCGGATCATCTCGCTGACTGCAAGAGAGGCACCTTAGGCAGTGTCTaGGCCCCTCATGGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: VRLGLIRVADHLADCKRGTLGSV*APHGEG
Trigger: TCCCTCCCCATGAGGGGCCAAGACACTGCCTAAGGT...GCCTCTCTTGCAGTCAGCGAGATGATCCGCCACCCGTATGAGACCCAGTCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CAA 90 bp CTCACAGGCCTTCCTAGACGTGGAGGCAAACAGCCTCCCTACGACCCCACCCCAGCCCTGAAAGCCAAGTaGTTTGACTCCAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LTGLPRRGGKQPPYDPTPALKAK*FDSRQQ
Trigger: CTGCTGCCTGGAGTCAAACAACTTGGCTTTCAGGGC...TGGGGTGGGGTCGTAGGGAGGCTGTTTGCCTCCACGTCTAGGAAGGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 90 bp GCAGCAACTTCAAGTGCTCAGGGAGGCCCTGGCAACAAAAAGAGCTaGGAGGTGCAGGGAGGGACTCGTGCTGTCAGCCTGCACAGCATC +
Preference number: 5 (lower is better)
Translates to: AATSSAQGGPGNKKS*EVQGGTRAVSLHSI
Trigger: GATGCTGTGCAGGCTGACAGCACGAGTCCCTCCCTGCACCTCTCAGCTCTTTTTGTTGCCAGGGCCTCCCTGAGCACTTGAAGTTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp CCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTACAAAGCGCCCAGCATaGGGGTCCAGGTCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: PWVAWQLEPTVDLCKFTTTKRPA*GSRSRR
Trigger: CCGGCGGGACCTGGACCCCAATGCTGGGCGCTTTGT...AGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AAACAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGTCGATCATGCGGAAGTaGTTGACAGGCTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: KQPPYDPTPCSRPHGLHGSIMRK*LTGLSP
Trigger: GGGAGACAAGCCTGTCAACAACTTCCGCATGATCGA...CCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTTGGAAGTCGAAGCTTTaGAGTAGCTGGTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLWKSKL*SSWLRK
Trigger: CTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCCA...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTGGTGCTAGTCCAGGCTaGGAGGGACATTATGCCACT +
Preference number: 5 (lower is better)
Translates to: HVAGRMGFMGLTGDTRYPGASPG*EGHYAT
Trigger: AGTGGCATAATGTCCCTCCAAGCCTGGACTAGCACC...AGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 90 bp CAAGGCTGTCTCCCCTCCACAGCTCTGTCTGGGAGTCCGGTGTTCTaGTGCTTTGGAAGCTCTAGGGCTCAGGTCCACTCCAATACATGC +
Preference number: 5 (lower is better)
Translates to: QGCLPSTALSGSPVF*CFGSSRAQVHSNTC
Trigger: GCATGTATTGGAGTGGACCTGAGCCCTAGAGCTTCCAAAGCAGCAGAACACCGGACTCCCAGACAGAGCTGTGGAGGGGAGACAGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 90 bp TCAGAACACCACGGCCACTCCTTCTCTTCTAGAAAGGATGAGGCCTaGGACCCAGGGTCAGGTCAGAATAAGGGGCAGAGTGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: SEHHGHSFSSRKDEA*DPGSGQNKGQSGQG
Trigger: CCCTTGGCCACTCTGCCCCTTATTCTGACCTGACCCTGGGTCCCAGGCCTCATCCTTTCTAGAAGAGAAGGAGTGGCCGTGGTGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 90 bp CCTCACAGCTCTTGCAGCAGCAACTTCAAGTGCTCAGGGAGGCCCTaGCAACAAAAAGAGCTGAGAGGTGCAGGGAGGGACTCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PHSSCSSNFKCSGRP*QQKELRGAGRDSCC
Trigger: ACAGCACGAGTCCCTCCCTGCACCTCTCAGCTCTTTTTGTTGCCAGGGCCTCCCTGAGCACTTGAAGTTGCTGCTGCAAGAGCTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp CTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTTGGAAGTCGAAGCTTTaGAGTAGCTGGTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LPTTPPHVAGRMGFMGLTWKSKL*SSWLRK
Trigger: CTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCCA...AGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp TTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGAATGGGCTTCATGGGCTaGACTGGGGACACCAGGTAC +
Preference number: 5 (lower is better)
Translates to: FLPTLTQGPELLENSPSRMGFMG*TGDTRY
Trigger: GTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCAT...TCTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGAATTATATGGCAGAGTaGGAACTCCAACCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLPTTPPHVAGRMGFMGLNYMAE*ELQPRQ
Trigger: CTGCCTGGGTTGGAGTTCCAACTCTGCCATATAATT...CAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp GCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCACAAAGCGCCCAGCATaGGGGTCCAGGTCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: AWQLEPTVDLCKFTTLNGTKRPA*GSRSRR
Trigger: CCGGCGGGACCTGGACCCCAATGCTGGGCGCTTTGT...GCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTTCGATCATGCGGAAGTaGTTGACAGGCTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: RRAPGWGEMGSDPQVPLPSIMRK*LTGLSP
Trigger: GGGAGACAAGCCTGTCAACAACTTCCGCATGATCGA...AGGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301032.8
ENST00000470125.5
ENST00000581945.1
CDS-3UTR CAA 90 bp CTAGGGCCCAGACTCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTGATCTAGTCACAGCCTaGATAGGGGAACACTATTCT +
Preference number: 5 (lower is better)
Translates to: LGPRLPWVAWQLEPTVDLDLVTA*IGEHYS
Trigger: AGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATC...AAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGTCTGGGCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CAGCCTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGATCTAGTCACAGCCTaGATAGGGGAACACTATTCT +
Preference number: 5 (lower is better)
Translates to: QPPYDPTPCSRPHGLHGLDLVTA*IGEHYS
Trigger: AGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATC...AAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTCCACACAGCTCTGTCTaGGGAGAGTCACTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLPHSSV*GESLSF
Trigger: GAAGGACAGTGACTCTCCCAAGACAGAGCTGTGTGG...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGTCTGGTACCCTGCCTTaGAGAACCACCTGTAAAGGG +
Preference number: 5 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQSGTLP*RTTCKG
Trigger: CCCTTTACAGGTGGTTCTCAAAGGCAGGGTACCAGA...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTTCGATCATGCGGAAGTaGTTGACAGGCTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLSIMRK*LTGLSP
Trigger: GGGAGACAAGCCTGTCAACAACTTCCGCATGATCGA...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp GGCCCAAGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACATGGAAGTCGAAGCTTTaGAGTAGCTGGTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GPSRAQLSCPEVLTAPLTWKSKL*SSWLRK
Trigger: CTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCCA...TGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACTTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCCCTTGGAAGTCGAAGCTTTaGAGTAGCTGGTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RRAPGWGEMGSDPQVPLPWKSKL*SSWLRK
Trigger: CTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCCA...AGGGAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301032.8
ENST00000470125.5
ENST00000581945.1
CDS-3UTR CAA 90 bp AGGCCGCATGGGCTTCATGGGCTTGACTGGGGACACCAGGTACCCTTCCTCCCAGATCTAGTCACAGCCTaGATAGGGGAACACTATTCT +
Preference number: 5 (lower is better)
Translates to: RPHGLHGLDWGHQVPFLPDLVTA*IGEHYS
Trigger: AGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATC...TGGGAGGAAGGGTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCATGCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CTCCCTACGACCCCACCCCATGTAGCAGGCCGCATGGGCTTCATGGGCTTGACTGATCTAGTCACAGCCTaGATAGGGGAACACTATTCT +
Preference number: 5 (lower is better)
Translates to: LPTTPPHVAGRMGFMGLTDLVTA*IGEHYS
Trigger: AGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATC...AGTCAAGCCCATGAAGCCCATGCGGCCTGCTACATGGGGTGGGGTCGTAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTACTCCCTTGGGTGGCTaGGCAGCTGGAGCCCACCGT +
Preference number: 5 (lower is better)
Translates to: GSLPDLVTALIGEHYSETTPLGG*AAGAHR
Trigger: ACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGAGT...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CTTCCTCCCAACATTGACTCAGGGTCCGGAGCTCCTGGAGAACTCCCCAAGCAGTGGAGCCTCTCTCATTaGGGAACAACTTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LPPNIDSGSGAPGELPKQWSLSH*GTTSCS
Trigger: ACTGCAGGAAGTTGTTCCCAAATGAGAGAGGCTCCA...CTGCTTGGGGAGTTCTCCAGGAGCTCCGGACCCTGAGTCAATGTTGGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 90 bp GGCCAAGGTGGAGAGCCACTGTCTCTCCATGCACCTTTCATCCTTTaGGGCTCATCCAAAGCCTCTGCTATGAGGTTTCCTAGCCCTCGT +
Preference number: 5 (lower is better)
Translates to: GQGGEPLSLHAPFIL*GSSKASAMRFPSPR
Trigger: ACGAGGGCTAGGAAACCTCATAGCAGAGGCTTTGGATGAGCCTCAAAGGATGAAAGGTGCATGGAGAGACAGTGGCTCTCCACCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 90 bp GATTCAGGGCCCAGTAATCTGGGAACAGCAAACCTCAGACCTGCATaGTTAGGGTCAGAAGAGACCAGGCAAGGGGTGCCAGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: DSGPSNLGTANLRPA*LGSEETRQGVPGWK
Trigger: TTTCCACCCTGGCACCCCTTGCCTGGTCTCTTCTGACCCTAATCATGCAGGTCTGAGGTTTGCTGTTCCCAGATTACTGGGCCCTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 90 bp CAGCTTAACCAAAGCTCTGCTGACTCAAGCCCAGAGCCTGGGATATaGCAGGTGGGAGGAGGCCAACTTTGCTCTCATCCTTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: QLNQSSADSSPEPGI*QVGGGQLCSHPLLI
Trigger: GATCAACAAAGGATGAGAGCAAAGTTGGCCTCCTCCCACCTGCCATATCCCAGGCTCTGGGCTTGAGTCAGCAGAGCTTTGGTTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp ATATCCCCAGCCTCTTTCTCTACGGATGATATGGGAATGGTGGCAGACACAGAAACCTTAGGCAGTGTCTaGGCCCCTCATGGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: ISPASFSTDDMGMVADTETLGSV*APHGEG
Trigger: TCCCTCCCCATGAGGGGCCAAGACACTGCCTAAGGT...TTCTGTGTCTGCCACCATTCCCATATCATCCGTAGAGAAAGAGGCTGGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS-3UTR CAA 90 bp CACAGAAGAGCCCCAGGGTGGGGAGAAATGGGATCAGACCCACAAGTCCCTCTCGAAAACTATATACAGTaGGTCCAGCTCCTACCATGG +
Preference number: 5 (lower is better)
Translates to: HRRAPGWGEMGSDPQVPLENYIQ*VQLLPW
Trigger: CCATGGTAGGAGCTGGACCAACTGTATATAGTTTTC...GAGAGGGACTTGTGGGTCTGATCCCATTTCTCCCCACCCTGGGGCTCTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301032.8
ENST00000470125.5
CDS TCA 90 bp CCAGGCAGCAGCTATGAGCAGCCCTGTAGGGCCCAAAAATACTACTaGTCAAAGAGCCCAATGTACACAGCATGCATAGATGCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PGSSYEQPCRAQKYY*SKSPMYTACIDARH
Trigger: GTGCCTGGCATCTATGCATGCTGTGTACATTGGGCTCTTTGATCAGTAGTATTTTTGGGCCCTACAGGGCTGCTCATAGCTGCTGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTACAAAGCGCCCAGCATaGGGGTCCAGGTCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSTKRPA*GSRSRR
Trigger: CCGGCGGGACCTGGACCCCAATGCTGGGCGCTTTGT...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp ACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCCTTCGATCATGCGGAAGTaGTTGACAGGCTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: TIYSWSSSYHGLQSQPVPSIMRK*LTGLSP
Trigger: GGGAGACAAGCCTGTCAACAACTTCCGCATGATCGA...AGGGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGACCTTAGGCAGTGTCTaGGCCCCTCATGGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKTLGSV*APHGEG
Trigger: TCCCTCCCCATGAGGGGCCAAGACACTGCCTAAGGT...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp AGTAGGGCCCAGCTAAGTTGTCCGGAAGTCCTGACTGCTCCTCTCACAGGCCTTGAAAACTATATACAGTaGGTCCAGCTCCTACCATGG +
Preference number: 5 (lower is better)
Translates to: SRAQLSCPEVLTAPLTGLENYIQ*VQLLPW
Trigger: CCATGGTAGGAGCTGGACCAACTGTATATAGTTTTC...AAGGCCTGTGAGAGGAGCAGTCAGGACTTCCGGACAACTTAGCTGGGCCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp GGATCCCTGCCTGATCTAGTCACAGCCTTGATAGGGGAACACTATTCTGAAACTCGGTGTTCTGCTGCTTaGGAAGCTCTAGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GSLPDLVTALIGEHYSETRCSAA*EALGLR
Trigger: CCTGAGCCCTAGAGCTTCCAAAGCAGCAGAACACCG...AGTTTCAGAATAGTGTTCCCCTATCAAGGCTGTGACTAGATCAGGCAGGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 90 bp CTTCTACTGCAACTCAGTGTATCAACTTCTCTGGTACCCTGCCTTTaGGAACCACCTGTAAAGGGGGCCACACAGCTCTGTCTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LLLQLSVSTSLVPCL*EPPVKGATQLCLGR
Trigger: TCTCCCAAGACAGAGCTGTGTGGCCCCCTTTACAGGTGGTTCTCAAAGGCAGGGTACCAGAGAAGTTGATACACTGAGTTGCAGTAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS CCA 90 bp TGCCAAGGCTGGCTAGATGACTTTGGGAGAATTAGGTATCCAGCCTaGTGGGAGCCTCTCTTCTCATATGGGAACAACTTCCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: CQGWLDDFGRIRYPA*WEPLFSYGNNFLQS
Trigger: AGACTGCAGGAAGTTGTTCCCATATGAGAAGAGAGGCTCCCACCAGGCTGGATACCTAATTCTCCCAAAGTCATCTAGCCAGCCTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS CCA 90 bp ATGGCCCAAGTCTTCCTGGAGGATCAGGGTGAGGGTATTAATGGTTaGGGAGACATGAAGAGTCTGAATGCCTCCCAAGTAACTCAGCCT +
Preference number: 5 (lower is better)
Translates to: MAQVFLEDQGEGING*GDMKSLNASQVTQP
Trigger: AGGCTGAGTTACTTGGGAGGCATTCAGACTCTTCATGTCTCCCCAACCATTAATACCCTCACCCTGATCCTCCAGGAAGACTTGGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS-3UTR CAA 90 bp GAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGACCTTAGGCAGTGTCTaGGCCCCTCATGGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: EPTVDLCKFTTLNGLKVVTLGSV*APHGEG
Trigger: TCCCTCCCCATGAGGGGCCAAGACACTGCCTAAGGT...CACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS CCA 90 bp GTGGGAGGAGGCCAACTTTGCTCTCATCCTTTGTTGATCTCCAAATaGGAGGAAGTCTTAGCAAGCAGAGAGAACCCCCTTAGAGGTCAT +
Preference number: 5 (lower is better)
Translates to: VGGGQLCSHPLLISK*EEVLASRENPLRGH
Trigger: ATGACCTCTAAGGGGGTTCTCTCTGCTTGCTAAGACTTCCTCCCATTTGGAGATCAACAAAGGATGAGAGCAAAGTTGGCCTCCTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp AAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTCAGCCAGTCCTGGAAGTCGAAGCTTTaGAGTAGCTGGTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: KLYTVGPAPTMGCNLSQSWKSKL*SSWLRK
Trigger: CTTCCGCAACCAGCTACTCAAAAGCTTCGACTTCCA...GGACTGGCTGAGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp GATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGGTAGTGGGCAGGGGACAGATGGGCTTCATGGGCTaGACTGGGGACACCAGGTAC +
Preference number: 5 (lower is better)
Translates to: DLCKFTTLNGLKVVGRGQMGFMG*TGDTRY
Trigger: GTACCTGGTGTCCCCAGTCAAGCCCATGAAGCCCAT...CTGTCCCCTGCCCACTACCTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp ATATCCCCAGCCTCTTTCTCTACGGATGATATGGGAATGGTGGCAGACACAGAATCTGGTACCCTGCCTTaGAGAACCACCTGTAAAGGG +
Preference number: 5 (lower is better)
Translates to: ISPASFSTDDMGMVADTESGTLP*RTTCKG
Trigger: CCCTTTACAGGTGGTTCTCAAAGGCAGGGTACCAGA...TTCTGTGTCTGCCACCATTCCCATATCATCCGTAGAGAAAGAGGCTGGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470125.5
CDS TCA 90 bp CTGGTGGGAGCCTCTCTTCTCATATGGGAACAACTTCCTGCAGTCTaGCCTGTCTCTTCTACTGCAACTCAGTGTATCAACTTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LVGASLLIWEQLPAV*PVSSTATQCINFSG
Trigger: ACCAGAGAAGTTGATACACTGAGTTGCAGTAGAAGAGACAGGTCAGACTGCAGGAAGTTGTTCCCATATGAGAAGAGAGGCTCCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS GCA 90 bp ATCCAGCCTGGTGGGAGCCTCTCTTCTCATATGGGAACAACTTCCTaGAGTCTGACCTGTCTCTTCTACTGCAACTCAGTGTATCAACTT +
Preference number: 5 (lower is better)
Translates to: IQPGGSLSSHMGTTS*SLTCLFYCNSVYQL
Trigger: AAGTTGATACACTGAGTTGCAGTAGAAGAGACAGGTCAGACTGCAGGAAGTTGTTCCCATATGAGAAGAGAGGCTCCCACCAGGCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS CCA 90 bp AACACAACTGCTCTATTCCTCTCAGCCACAAATAGCTTCCTAAGCTaGATTCAGGGCCCAGTAATCTGGGAACAGCAAACCTCAGACCTG +
Preference number: 5 (lower is better)
Translates to: NTTALFLSATNSFLS*IQGPVIWEQQTSDL
Trigger: CAGGTCTGAGGTTTGCTGTTCCCAGATTACTGGGCCCTGAATCCAGCTTAGGAAGCTATTTGTGGCTGAGAGGAATAGAGCAGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp TCCCTTGGGTGGCTTGGCAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAAGAAAACTATATACAGTaGGTCCAGCTCCTACCATGG +
Preference number: 5 (lower is better)
Translates to: SLGWLGSWSPPWIFVNLQENYIQ*VQLLPW
Trigger: CCATGGTAGGAGCTGGACCAACTGTATATAGTTTTC...TTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTGCCAAGCCACCCAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS-3UTR CAA 90 bp CAGCTGGAGCCCACCGTGGATCTTTGTAAATTTACAACTCTAAATGGCCTGAAGTGCACCTTTCATCCTTaGAGGCTCATCCAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: QLEPTVDLCKFTTLNGLKCTFHP*RLIQSL
Trigger: GAGGCTTTGGATGAGCCTCAAAGGATGAAAGGTGCA...CTTCAGGCCATTTAGAGTTGTAAATTTACAAAGATCCACGGTGGGCTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 90 bp TCTCATATGGGAACAACTTCCTGCAGTCTGACCTGTCTCTTCTACTaGAACTCAGTGTATCAACTTCTCTGGTACCCTGCCTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: SHMGTTSCSLTCLFY*NSVYQLLWYPAFEN
Trigger: GTTCTCAAAGGCAGGGTACCAGAGAAGTTGATACACTGAGTTGCAGTAGAAGAGACAGGTCAGACTGCAGGAAGTTGTTCCCATATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS GCA 90 bp CCCATTTTACAGATGAAAAGACATGCTCAGAGAGGTGAGGTTACTTaGCCAAGGTCACACAGACAATTATATGGCAGAGTTGGAACTCCA +
Preference number: 5 (lower is better)
Translates to: PILQMKRHAQRGEVT*PRSHRQLYGRVGTP
Trigger: TGGAGTTCCAACTCTGCCATATAATTGTCTGTGTGACCTTGGGCAAGTAACCTCACCTCTCTGAGCATGTCTTTTCATCTGTAAAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS-3UTR CAA 90 bp AGTTTATTGAAAACTATATACAGTTGGTCCAGCTCCTACCATGGGCTGCAATCTGAAAACTATATACAGTaGGTCCAGCTCCTACCATGG +
Preference number: 5 (lower is better)
Translates to: SLLKTIYSWSSSYHGLQSENYIQ*VQLLPW
Trigger: CCATGGTAGGAGCTGGACCAACTGTATATAGTTTTC...AGATTGCAGCCCATGGTAGGAGCTGGACCAACTGTATATAGTTTTCAATAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000470125.5
ENST00000484980.5
CDS CCA 72 bp GATTCCGCAGGCGGCTGTGGTATGGGGGCCACGCTCTaGCCCGAGGGCCCCGGAGCGGACTCCGTCGCCGTC +
Preference number: 6 (lower is better)
Translates to: DSAGGCGMGATL*PEGPGADSVAV
Trigger: GACGGCGACGGAGTCCGCTCCGGGGCCCTCGGGCCAGAGCGTGGCCCCCATACCACAGCCGCCTGCGGAATC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000444148.1
ENST00000578434.1
ENST00000581945.1
CDS CCA 72 bp CGGACCCAGATTCGGATTCCGCAGGCGGCTGTGGTATaGGGGCCACGCTCTGGCCCGAGGGCCCCGGAGCGG +
Preference number: 6 (lower is better)
Translates to: RTQIRIPQAAVV*GPRSGPRAPER
Trigger: CCGCTCCGGGGCCCTCGGGCCAGAGCGTGGCCCCCATACCACAGCCGCCTGCGGAATCCGAATCTGGGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000444148.1
ENST00000578434.1
ENST00000581945.1
CDS CCA 72 bp CGACTCGGACCCAGATTCGGATTCCGCAGGCGGCTGTaGTATGGGGGCCACGCTCTGGCCCGAGGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: RLGPRFGFRRRL*YGGHALARGPR
Trigger: CCGGGGCCCTCGGGCCAGAGCGTGGCCCCCATACCACAGCCGCCTGCGGAATCCGAATCTGGGTCCGAGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301032.8
ENST00000335765.9
ENST00000444148.1
ENST00000578434.1
ENST00000581945.1
CDS GCA 72 bp GTCTCCCACTGTGAACTCCACCCACCGGTGATCCGCTaGAGCCCCAGCACGTCCTCCGGCCCGATCGGCTGC +
Preference number: 6 (lower is better)
Translates to: VSHCELHPPVIR*SPSTSSGPIGC
Trigger: GCAGCCGATCGGGCCGGAGGACGTGCTGGGGCTGCAGCGGATCACCGGTGGGTGGAGTTCACAGTGGGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581945.1
CDS CCA 72 bp TGCTGTCAGCCTGCACAGCATCACATCCTCCCCTGGTaGCCCACAGAGGCCTGGAAATCACCCTCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: CCQPAQHHILPW*PTEAWKSPSRP
Trigger: GGGCCTGGAGGGTGATTTCCAGGCCTCTGTGGGCCACCAGGGGAGGATGTGATGCTGTGCAGGCTGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CAA 72 bp GCCTGGTCCAGCCTCCCTCTCTCCATTGATGCCTGCTaGGGCAAGGGAGCTCAGTACTCTGGGGGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: AWSSLPLSIDAC*GKGAQYSGGPA
Trigger: AGCTGGGCCCCCAGAGTACTGAGCTCCCTTGCCCAAGCAGGCATCAATGGAGAGAGGGAGGCTGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CAA 90 bp CGGGCCTCAAAGCGCTCTGGAGACTCCACAGCTACAGGGCTATGGTaGCAGCTGCTGCCGCACGTACCTCCACGCTGGGAAAAGGGGACG +
Preference number: 6 (lower is better)
Translates to: RASKRSGDSTATGLW*QLLPHVPPRWEKGT
Trigger: CGTCCCCTTTTCCCAGCGTGGAGGTACGTGCGGCAGCAGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAGAGCGCTTTGAGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS CCA 72 bp TCGTGCTGTCAGCCTGCACAGCATCACATCCTCCCCTaGTGGCCCACAGAGGCCTGGAAATCACCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SCCQPAQHHILP*WPTEAWKSPSR
Trigger: CCTGGAGGGTGATTTCCAGGCCTCTGTGGGCCACCAGGGGAGGATGTGATGCTGTGCAGGCTGACAGCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 72 bp CTCCCCTCCACAGCTCTGTCTGGGAGTCCGGTGTTCTaGTGCTTTGGAAGCTCTAGGGCTCAGGTCCACTCC +
Preference number: 6 (lower is better)
Translates to: LPSTALSGSPVF*CFGSSRAQVHS
Trigger: GGAGTGGACCTGAGCCCTAGAGCTTCCAAAGCAGCAGAACACCGGACTCCCAGACAGAGCTGTGGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 72 bp CTGGAGACTCCACAGCTACAGGGCTATGGTTGCAGCTaGTGCCGCACGTACCTCCACGCTGGGAAAAGGGGA +
Preference number: 6 (lower is better)
Translates to: LETPQLQGYGCS*CRTYLHAGKRG
Trigger: TCCCCTTTTCCCAGCGTGGAGGTACGTGCGGCAGCAGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS GCA 72 bp AGCGCTCTGGAGACTCCACAGCTACAGGGCTATGGTTaGAGCTGCTGCCGCACGTACCTCCACGCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: SALETPQLQGYG*SCCRTYLHAGK
Trigger: TTTCCCAGCGTGGAGGTACGTGCGGCAGCAGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAGAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS CCA 72 bp TCAAAGCGCTCTGGAGACTCCACAGCTACAGGGCTATaGTTGCAGCTGCTGCCGCACGTACCTCCACGCTGG +
Preference number: 6 (lower is better)
Translates to: SKRSGDSTATGL*LQLLPHVPPRW
Trigger: CCAGCGTGGAGGTACGTGCGGCAGCAGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAGAGCGCTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS CAA 72 bp AAGCGCTCTGGAGACTCCACAGCTACAGGGCTATGGTaGCAGCTGCTGCCGCACGTACCTCCACGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: KRSGDSTATGLW*QLLPHVPPRWE
Trigger: TTCCCAGCGTGGAGGTACGTGCGGCAGCAGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAGAGCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS GCA 72 bp GGATCACTGCCCTCTGGAAAGAGGGACCTCAGTCCCTaGCCTTGGGGTACACCCCCAGTGTGGAAGAGACAT +
Preference number: 6 (lower is better)
Translates to: GSLPSGKRDLSP*PWGTPPVWKRH
Trigger: ATGTCTCTTCCACACTGGGGGTGTACCCCAAGGGCAGGGACTGAGGTCCCTCTTTCCAGAGGGCAGTGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS CAA 90 bp TCAACATCAGCCTGGTCCAGCCTCCCTCTCTCCATTGATGCCTGCTaGGGCAAGGGAGCTCAGTACTCTGGGGGCCCAGCTAAGAATGGC +
Preference number: 6 (lower is better)
Translates to: STSAWSSLPLSIDAC*GKGAQYSGGPAKNG
Trigger: GCCATTCTTAGCTGGGCCCCCAGAGTACTGAGCTCCCTTGCCCAAGCAGGCATCAATGGAGAGAGGGAGGCTGGACCAGGCTGATGTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 72 bp CCCTCCACAGCTCTGTCTGGGAGTCCGGTGTTCTGCTaGTTTGGAAGCTCTAGGGCTCAGGTCCACTCCAAT +
Preference number: 6 (lower is better)
Translates to: PSTALSGSPVFC*FGSSRAQVHSN
Trigger: ATTGGAGTGGACCTGAGCCCTAGAGCTTCCAAAGCAGCAGAACACCGGACTCCCAGACAGAGCTGTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 72 bp GTTATTCTCACAAAGGGGGCCAGGGCAGGTTGCTGGTaGATGTGGCCAAGGTGGAGAGCCACTGTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: VILTKGARAGCW*MWPRWRATVSP
Trigger: TGGAGAGACAGTGGCTCTCCACCTTGGCCACATTCACCAGCAACCTGCCCTGGCCCCCTTTGTGAGAATAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 72 bp TTCAACATCAGCCTGGTCCAGCCTCCCTCTCTCCATTaGTGCCTGCTTGGGCAAGGGAGCTCAGTACTCTGG +
Preference number: 6 (lower is better)
Translates to: FNISLVQPPSLH*CLLGQGSSVLW
Trigger: CCAGAGTACTGAGCTCCCTTGCCCAAGCAGGCATCAATGGAGAGAGGGAGGCTGGACCAGGCTGATGTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 72 bp TCTTGCAGCAGCAACTTCAAGTGCTCAGGGAGGCCCTaGCAACAAAAAGAGCTGAGAGGTGCAGGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: SCSSNFKCSGRP*QQKELRGAGRD
Trigger: GTCCCTCCCTGCACCTCTCAGCTCTTTTTGTTGCCAGGGCCTCCCTGAGCACTTGAAGTTGCTGCTGCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 72 bp CTCTTCATTAGTGCAGGGACGGGCCTCAAAGCGCTCTaGAGACTCCACAGCTACAGGGCTATGGTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: LFISAGTGLKAL*RLHSYRAMVAA
Trigger: AGCTGCAACCATAGCCCTGTAGCTGTGGAGTCTCCAGAGCGCTTTGAGGCCCGTCCCTGCACTAATGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS CAA 72 bp CCACAGCTCTGTCTGGGAGTCCGGTGTTCTGCTGCTTaGGAAGCTCTAGGGCTCAGGTCCACTCCAATACAT +
Preference number: 6 (lower is better)
Translates to: PQLCLGVRCSAA*EALGLRSTPIH
Trigger: ATGTATTGGAGTGGACCTGAGCCCTAGAGCTTCCAAAGCAGCAGAACACCGGACTCCCAGACAGAGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 72 bp CCCAGTAATCTGGGAACAGCAAACCTCAGACCTGCATaGTTAGGGTCAGAAGAGACCAGGCAAGGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: PSNLGTANLRPA*LGSEETRQGVP
Trigger: TGGCACCCCTTGCCTGGTCTCTTCTGACCCTAATCATGCAGGTCTGAGGTTTGCTGTTCCCAGATTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 72 bp TTAGGGTCAGAAGAGACCAGGCAAGGGGTGCCAGGGTaGAAATCCCTGGAACTCTGTTCTCAATTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: LGSEETRQGVPG*KSLELCSQFLH
Trigger: GTGCAGGAATTGAGAACAGAGTTCCAGGGATTTCCACCCTGGCACCCCTTGCCTGGTCTCTTCTGACCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 72 bp TCTAACCCTCACAGCTCTTGCAGCAGCAACTTCAAGTaGTCAGGGAGGCCCTGGCAACAAAAAGAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SNPHSSCSSNFK*SGRPWQQKELR
Trigger: TCTCAGCTCTTTTTGTTGCCAGGGCCTCCCTGAGCACTTGAAGTTGCTGCTGCAAGAGCTGTGAGGGTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CAA 90 bp GGGATATGGCAGGTGGGAGGAGGCCAACTTTGCTCTCATCCTTTGTaGATCTCCAAATGGGAGGAAGTCTTAGCAAGCAGAGAGAACCCC +
Preference number: 6 (lower is better)
Translates to: GIWQVGGGQLCSHPL*ISKWEEVLASRENP
Trigger: GGGGTTCTCTCTGCTTGCTAAGACTTCCTCCCATTTGGAGATCAACAAAGGATGAGAGCAAAGTTGGCCTCCTCCCACCTGCCATATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS TCA 72 bp CAACTCAGTGTATCAACTTCTCTGGTACCCTGCCTTTaGGAACCACCTGTAAAGGGGGCCACACAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: QLSVSTSLVPCL*EPPVKGATQLC
Trigger: ACAGAGCTGTGTGGCCCCCTTTACAGGTGGTTCTCAAAGGCAGGGTACCAGAGAAGTTGATACACTGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS GCA 72 bp GGTGGGAGCCTCTCTTCTCATATGGGAACAACTTCCTaGAGTCTGACCTGTCTCTTCTACTGCAACTCAGTG +
Preference number: 6 (lower is better)
Translates to: GGSLSSHMGTTS*SLTCLFYCNSV
Trigger: CACTGAGTTGCAGTAGAAGAGACAGGTCAGACTGCAGGAAGTTGTTCCCATATGAGAAGAGAGGCTCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS GCA 72 bp CAGGGTGGAAATCCCTGGAACTCTGTTCTCAATTCCTaGACAGGAAGGGGTTCTCATGAAGCCCTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: QGGNPWNSVLNS*TGRGSHEALSS
Trigger: AGAGGAAAGGGCTTCATGAGAACCCCTTCCTGTGCAGGAATTGAGAACAGAGTTCCAGGGATTTCCACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 72 bp GGAACAACTTCCTGCAGTCTGACCTGTCTCTTCTACTaGAACTCAGTGTATCAACTTCTCTGGTACCCTGCC +
Preference number: 6 (lower is better)
Translates to: GTTSCSLTCLFY*NSVYQLLWYPA
Trigger: GGCAGGGTACCAGAGAAGTTGATACACTGAGTTGCAGTAGAAGAGACAGGTCAGACTGCAGGAAGTTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS CCA 72 bp TTGCCCAAGGTCACACAGACAATTATATGGCAGAGTTaGAACTCCAACCCAGGCAGTCCAGCTCAGAAACTC +
Preference number: 6 (lower is better)
Translates to: LPKVTQTIIWQS*NSNPGSPAQKL
Trigger: GAGTTTCTGAGCTGGACTGCCTGGGTTGGAGTTCCAACTCTGCCATATAATTGTCTGTGTGACCTTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 72 bp GTCTTCCTGGAGGATCAGGGTGAGGGTATTAATGGTTaGGGAGACATGAAGAGTCTGAATGCCTCCCAAGTA +
Preference number: 6 (lower is better)
Translates to: VFLEDQGEGING*GDMKSLNASQV
Trigger: TACTTGGGAGGCATTCAGACTCTTCATGTCTCCCCAACCATTAATACCCTCACCCTGATCCTCCAGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578434.1
CDS CAA 72 bp CTTGCCCAAGGTCACACAGACAATTATATGGCAGAGTaGGAACTCCAACCCAGGCAGTCCAGCTCAGAAACT +
Preference number: 6 (lower is better)
Translates to: LAQGHTDNYMAE*ELQPRQSSSET
Trigger: AGTTTCTGAGCTGGACTGCCTGGGTTGGAGTTCCAACTCTGCCATATAATTGTCTGTGTGACCTTGGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CAA 72 bp CCCTGTAAGGCCTTCTCTTCTCCCATTCTCCAACTTTaGGAGCCTCTCTCATTTGGGAACAACTTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: PCKAFSSPILQL*EPLSFGNNFLQ
Trigger: CTGCAGGAAGTTGTTCCCAAATGAGAGAGGCTCCAAAAGTTGGAGAATGGGAGAAGAGAAGGCCTTACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS CCA 72 bp TGGCTAGATGACTTTGGGAGAATTAGGTATCCAGCCTaGTGGGAGCCTCTCTTCTCATATGGGAACAACTTC +
Preference number: 6 (lower is better)
Translates to: WLDDFGRIRYPA*WEPLFSYGNNF
Trigger: GAAGTTGTTCCCATATGAGAAGAGAGGCTCCCACCAGGCTGGATACCTAATTCTCCCAAAGTCATCTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470125.5
ENST00000484980.5
CDS TCA 72 bp AGCTATGAGCAGCCCTGTAGGGCCCAAAAATACTACTaGTCAAAGAGCCCAATGTACACAGCATGCATAGAT +
Preference number: 6 (lower is better)
Translates to: SYEQPCRAQKYY*SKSPMYTACID
Trigger: ATCTATGCATGCTGTGTACATTGGGCTCTTTGATCAGTAGTATTTTTGGGCCCTACAGGGCTGCTCATAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484980.5
CDS GCA 72 bp AAAGTTACTCAGGACTCAGTCAGTCTGAGAAAGTTCTaGCCCAGAGCTAAGCTGAATCCTAAATGCTGCTAT +
Preference number: 6 (lower is better)
Translates to: KVTQDSVSLRKF*PRAKLNPKCCY
Trigger: ATAGCAGCATTTAGGATTCAGCTTAGCTCTGGGGCAGAACTTTCTCAGACTGACTGAGTCCTGAGTAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484980.5