RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UMODL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000177398

Ensembl transcript IDs: ENST00000400421.6, ENST00000400423.6, ENST00000400424.6, ENST00000400427.5, ENST00000408910.6, ENST00000408910.7, ENST00000408989.6, ENST00000466434.5, ENST00000468982.5, ENST00000475047.1, ENST00000484174.5, ENST00000484712.1, ENST00000485357.1, ENST00000491559.5, ENST00000497243.5

Found 1276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTaGGCTCACCCGGGCTCTGGCAGAGCCCACCCGTCAGAGCAGACC +
Preference number: 1 (lower is better)
Translates to: TACLFGTDGGCCLPF*AHPGSGRAHPSEQT
Trigger: GGTCTGCTCTGACGGGTGGGCTCTGCCAGAGCCCGGGTGAGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR GCA 90 bp AGTATGGGGGCCAGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTCACGACCACACTTCCCGCCTGGAGA +
Preference number: 1 (lower is better)
Translates to: SMGASVEMPMGNPGS*TVSLSLTTTLPAWR
Trigger: TCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCCCCATACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR GCA 90 bp CATCTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTaGCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: HLPLGCGSSRTYRTA*LFGTDGGCCLPFWA
Trigger: AGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CCA 90 bp CGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTaGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGAGCATC +
Preference number: 1 (lower is better)
Translates to: RFWPPQRAQHSTGPR*MLSEPVMDHPKWSI
Trigger: GATGCTCCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR TCA 90 bp CACTCCAGGTTCAGCTTCCGTGGAGACGTGGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAGCCCTCCAGGTTTGCGCACAGTTCC +
Preference number: 1 (lower is better)
Translates to: HSRFSFRGDVAGASW*QTHQYEPSRFAHSS
Trigger: GGAACTGTGCGCAAACCTGGAGGGCTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR GCA 90 bp CATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTaGCCAACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGT +
Preference number: 1 (lower is better)
Translates to: HDLGRTRDAFLASPA*PTQHRPSLDAQRAC
Trigger: ACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR CCA 90 bp CAGAGCAGACCTCCGTTAAGGCTTGAAGAGTTAAGAACCGAGGGATaGGTGGAGGTGCAGAGAGACACTGGGGATCCCGGGGGAGCCCAC +
Preference number: 1 (lower is better)
Translates to: QSRPPLRLEELRTEG*VEVQRDTGDPGGAH
Trigger: GTGGGCTCCCCCGGGATCCCCAGTGTCTCTCTGCACCTCCACCCATCCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGTCTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CCA 90 bp TCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGATGCGTTTCTaGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGATG +
Preference number: 1 (lower is better)
Translates to: SEQRDMTWEEPEMRF*PPQRAQHSTGPRWM
Trigger: CATCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR CCA 90 bp CTGGAGGACAATCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGACAGACGCACCAGTACGAGCCCTCCA +
Preference number: 1 (lower is better)
Translates to: LEDNLPTPGSASVET*LELPGDRRTSTSPP
Trigger: TGGAGGGCTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTGTCCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR TCA 90 bp GGCTCTGGCAGAGCCCACCCGTCAGAGCAGACCTCCGTTAAGGCTTaGAGAGTTAAGAACCGAGGGATGGGTGGAGGTGCAGAGAGACAC +
Preference number: 1 (lower is better)
Translates to: GSGRAHPSEQTSVKA*RVKNRGMGGGAERH
Trigger: GTGTCTCTCTGCACCTCCACCCATCCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGTCTGCTCTGACGGGTGGGCTCTGCCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR TCA 90 bp GTGCCCAACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTaGTGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATT +
Preference number: 1 (lower is better)
Translates to: VPNTAPALVGCSASL*WTIPNGASSTTSHI
Trigger: AATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGTTGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR CCA 90 bp GGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCGCCTaGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAG +
Preference number: 1 (lower is better)
Translates to: GSCTVSLSLTTTLPA*RDTICILSFPLRYK
Trigger: CTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR CCA 90 bp GTCACTGACTGGAGGACAATCTTCCCACTCCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTCCTGGTGACAGACGCACCAGTACGA +
Preference number: 1 (lower is better)
Translates to: VTDWRTIFPLQVQLP*RRGWSFLVTDAPVR
Trigger: TCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTGTCCTCCAGTCAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR CCA 90 bp GACAGTTCTCTGCAGAGCTTAGTGGGGTGCCGTGGGATGTGGACGTaGCGCGAAGTTCTAAGTGGATCTCAAGGCCACGTGCTTAGGCTG +
Preference number: 1 (lower is better)
Translates to: DSSLQSLVGCRGMWT*REVLSGSQGHVLRL
Trigger: CAGCCTAAGCACGTGGCCTTGAGATCCACTTAGAACTTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR GCA 90 bp TGGAGCTTCCTGGTGACAGACGCACCAGTACGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGAGCAGGCATTGAGCTCCTCATAGAA +
Preference number: 1 (lower is better)
Translates to: WSFLVTDAPVRALQV*AQFPSRAGIELLIE
Trigger: TTCTATGAGGAGCTCAATGCCTGCTCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR GCA 90 bp AGCTTGAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGT +
Preference number: 1 (lower is better)
Translates to: SLSLTTTLPAWRDTI*ILSFPLRYKSDTTG
Trigger: ACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR CCA 90 bp CAAGTGAAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTaGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCAA +
Preference number: 1 (lower is better)
Translates to: QVKAPQLTSEQRDMT*EEPEMRFWPPQRAQ
Trigger: TTGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTTCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR CCA 90 bp GGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATaGAGCATCCAGCACAACCAGCCACATTTCAGTGTCTTATGCGAT +
Preference number: 1 (lower is better)
Translates to: GPRWMLSEPVMDHPK*SIQHNQPHFSVLCD
Trigger: ATCGCATAAGACACTGAAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR CCA 90 bp TCTATAGACAGTTCTCTGCAGAGCTTAGTGGGGTGCCGTGGGATGTaGACGTGGCGCGAAGTTCTAAGTGGATCTCAAGGCCACGTGCTT +
Preference number: 1 (lower is better)
Translates to: SIDSSLQSLVGCRGM*TWREVLSGSQGHVL
Trigger: AAGCACGTGGCCTTGAGATCCACTTAGAACTTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACTGTCTATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR CCA 90 bp GCAGGAATCTATAGACAGTTCTCTGCAGAGCTTAGTGGGGTGCCGTaGGATGTGGACGTGGCGCGAAGTTCTAAGTGGATCTCAAGGCCA +
Preference number: 1 (lower is better)
Translates to: AGIYRQFSAELSGVP*DVDVARSSKWISRP
Trigger: TGGCCTTGAGATCCACTTAGAACTTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACTGTCTATAGATTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR TCA 90 bp TCGGGTCTCTCTGAGAATGTGAAATATTCTATATTTGCCAAAGGGTaGCGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCT +
Preference number: 1 (lower is better)
Translates to: SGLSENVKYSIFAKG*RTPREGKPRRVLRA
Trigger: AGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAATATTTCACATTCTCAGAGAGACCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR GCA 90 bp ACAGAGCAGGAATCTATAGACAGTTCTCTGCAGAGCTTAGTGGGGTaGCGTGGGATGTGGACGTGGCGCGAAGTTCTAAGTGGATCTCAA +
Preference number: 1 (lower is better)
Translates to: TEQESIDSSLQSLVG*RGMWTWREVLSGSQ
Trigger: TTGAGATCCACTTAGAACTTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACTGTCTATAGATTCCTGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR TCA 90 bp TTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGAGAATGTaGAATATTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGG +
Preference number: 1 (lower is better)
Translates to: FSKEHQERGRVSLRM*NILYLPKGDGRQGR
Trigger: CCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAATATTTCACATTCTCAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR TCA 90 bp CTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTaGGAATGTGAAATATTCTATATTTGCCAAAGGGTGACGGACGCC +
Preference number: 1 (lower is better)
Translates to: LTYFRKSIKSAVGSL*ECEIFYICQRVTDA
Trigger: GGCGTCCGTCACCCTTTGGCAAATATAGAATATTTCACATTCTCAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CCA 90 bp TGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTaGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATACGAC +
Preference number: 1 (lower is better)
Translates to: WYSTLLRLSNFSVRL*FTIFIVTSNTWAYD
Trigger: GTCGTATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400421.6
3UTR CCA 90 bp TGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTaGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTT +
Preference number: 1 (lower is better)
Translates to: WYSTLLRLSNFSVRL*FTIFIVTSNTWALV
Trigger: AACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR TCA 90 bp TGGAGCATCCAGCACAACCAGCCACATTTCAGTGTCTTATGCGATTaGTTCTACTTGATCAGAATCTGTGATCCACACATATTACCCACT +
Preference number: 1 (lower is better)
Translates to: WSIQHNQPHFSVLCD*FYLIRICDPHILPT
Trigger: AGTGGGTAATATGTGTGGATCACAGATTCTGATCAAGTAGAATCAATCGCATAAGACACTGAAATGTGGCTGGTTGTGCTGGATGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR TCA 90 bp AGCACAACCAGCCACATTTCAGTGTCTTATGCGATTGATTCTACTTaGTCAGAATCTGTGATCCACACATATTACCCACTGTCATTCTTT +
Preference number: 1 (lower is better)
Translates to: STTSHISVSYAIDST*SESVIHTYYPLSFF
Trigger: AAAGAATGACAGTGGGTAATATGTGTGGATCACAGATTCTGATCAAGTAGAATCAATCGCATAAGACACTGAAATGTGGCTGGTTGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR TCA 90 bp ACATTTCAGTGTCTTATGCGATTGATTCTACTTGATCAGAATCTGTaGTCCACACATATTACCCACTGTCATTCTTTACTGACTCTGAGA +
Preference number: 1 (lower is better)
Translates to: TFQCLMRLILLDQNL*STHITHCHSLLTLR
Trigger: TCTCAGAGTCAGTAAAGAATGACAGTGGGTAATATGTGTGGATCACAGATTCTGATCAAGTAGAATCAATCGCATAAGACACTGAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR GCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTCAGCACCCCCAGGACTaGCCCCGTCTTCCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCQHPQD*PRLPQP
Trigger: GGGCTGCGGAAGACGGGGGCAGTCCTGGGGGTGCTG...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGGCTCACCCGGGCTCTaGCAGAGCCCACCCGTCAGA +
Preference number: 2 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGGSPGL*QSPPVR
Trigger: TCTGACGGGTGGGCTCTGCCAGAGCCCGGGTGAGCC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR GCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGCAGCACCCCCAGGACTaGCCCCGTCTTCCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWQHPQD*PRLPQP
Trigger: GGGCTGCGGAAGACGGGGGCAGTCCTGGGGGTGCTG...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGTGCTGTCTTCCTTTCTaGGCTCACCCGGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGCCLPF*AHPGSG
Trigger: GCCAGAGCCCGGGTGAGCCCAGAAAGGAAGACAGCA...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR GCA 90 bp ATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 2 (lower is better)
Translates to: MGNPGSCTVSLSLTTTLPGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...GGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp GAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: EMPMGNPGSCTVSLSLTTLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...GGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR CAA 90 bp AGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGC +
Preference number: 2 (lower is better)
Translates to: SVEMPMGNPGSCTVS*SLTTTLPAWRDTIC
Trigger: GCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp GCGTGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 2 (lower is better)
Translates to: AWWRRRPRTPGSWSSPCTVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...TGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGGCTCACCCGGGCTCTaGCAGAGCCCACCCGTCAGA +
Preference number: 2 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFGSPGL*QSPPVR
Trigger: TCTGACGGGTGGGCTCTGCCAGAGCCCGGGTGAGCC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp CATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCTTAGTGGGGTGCCGTaGGATGTGGACGTGGCGCGA +
Preference number: 2 (lower is better)
Translates to: HGKPGVLHGELEPHDHTSLSGVP*DVDVAR
Trigger: TCGCGCCACGTCCACATCCCACGGCACCCCACTAAG...GGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR CAA 90 bp GCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTaGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGAGCAT +
Preference number: 2 (lower is better)
Translates to: AFLASPACPTQHRPS*DAQRACDGPSQMEH
Trigger: ATGCTCCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGTTCTGGAGGCAGCTTaGCTCACGGCGACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLVLEAA*LTATFL
Trigger: CAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAAC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp GGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 2 (lower is better)
Translates to: GDAHGKPGVLHGELEPHDQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...GTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR TCA 90 bp CATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCCCCCAACATCAGGGTaGCCAATGGGTTCCAACCTG +
Preference number: 2 (lower is better)
Translates to: HGKPGVLHGELEPHDHTSPPTSG*PMGSNL
Trigger: CAGGTTGGAACCCATTGGTCACCCTGATGTTGGGGG...GGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000400421.6
3UTR-3UTR CCA 90 bp GGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCACTCCACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 2 (lower is better)
Translates to: GDVGPAPLVAGLHPVQHSTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...GGAGTGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGGTGCAGAGAGACACTaGGGATCCCGGGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGGAERH*GSRGSP
Trigger: TGGGCTCCCCCGGGATCCCCAGTGTCTCTCTGCACC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGCCCTTCATCTGCCCCTaGGCTGTGGCTCCTCTAGGA +
Preference number: 2 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWPFICP*AVAPLG
Trigger: TCCTAGAGGAGCCACAGCCCAGGGGCAGATGAAGGG...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR TCA 90 bp GGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCACTCCGGACCACGTAGTCACTaGCTGGAGGACAATCTGTTT +
Preference number: 2 (lower is better)
Translates to: GDVGPAPLVAGLHPVQHSGPRSH*LEDNLF
Trigger: AAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...GGAGTGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR GCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCACCTACAGGACGGCCTaGCTCTTCGGGACAGACGGT +
Preference number: 2 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFTYRTA*LFGTDG
Trigger: ACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp CCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 2 (lower is better)
Translates to: PHDHTSRLERHDLHSQLPVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...GGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp GATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: DAHGKPGVLHGELEPHDHELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...GTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp GGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: GDAHGKPGVLHGELEPHDELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...GTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp ACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 2 (lower is better)
Translates to: TTTLPAWRDTICILSFPLVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp TACCTGGGCATTGGTTTTGATGGTCAGCGTGGTGGAGACGTCGGCCCCGCACCCGGACCACGTAGTCACTaGCTGGAGGACAATCTTGCA +
Preference number: 2 (lower is better)
Translates to: YLGIGFDGQRGGDVGPAPGPRSH*LEDNLA
Trigger: TGCAAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...GGGTGCGGGGCCGACGTCTCCACCACGCTGACCATCAAAACCAATGCCCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497243.5
3UTR-3UTR TCA 90 bp GACAGTTCTCTGCAGAGCTTAGTGGGGTGCCGTGGGATGTGGACGTGGCGCGAAGGAGGAAGGATCTCTTaGGGCTGGGAGCTTGAGAAC +
Preference number: 2 (lower is better)
Translates to: DSSLQSLVGCRGMWTWREGGRIS*GWELEN
Trigger: GTTCTCAAGCTCCCAGCCTCAAGAGATCCTTCCTCC...TTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR GCA 90 bp ACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: TLPAWRDTICILSFPLRYGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...GTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR GCA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 2 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR GCA 90 bp CACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 2 (lower is better)
Translates to: HDLHSQLPTSVQVRHHWWGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...CCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp GATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: DAHGKPGVLHGELEPHDHCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...GTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp GGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: GDAHGKPGVLHGELEPHDCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...GTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 2 (lower is better)
Translates to: TTLPAWRDTICILSFPLRVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp ACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 2 (lower is better)
Translates to: TTTLPAWRDTICILSFPLTGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCCCTTCATCTGCCCCTaGGCTGTGGCTCCTCTAGGA +
Preference number: 2 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGPFICP*AVAPLG
Trigger: TCCTAGAGGAGCCACAGCCCAGGGGCAGATGAAGGG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 2 (lower is better)
Translates to: TTLPAWRDTICILSFPLRASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR CCA 90 bp ATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCGCGCGAAGTTCTAAGTaGATCTCAAGGCCACGTGCT +
Preference number: 2 (lower is better)
Translates to: MGNPGSCTVSLSLTTTLPARSSK*ISRPRA
Trigger: AGCACGTGGCCTTGAGATCCACTTAGAACTTCGCGC...GGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR TCA 90 bp TGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCATTCCAGAGCAGGCATTaGGCTCCTCATAGAAACACT +
Preference number: 2 (lower is better)
Translates to: WWRRRPRTPGSWSSPCTAFQSRH*APHRNT
Trigger: AGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAA...TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR TCA 90 bp TCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGAGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 2 (lower is better)
Translates to: SASHFGTSQTPLVGRSSRAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...TCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGGGACAGACGGTGGCTaGTGTCTTCCTTTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGGTDGG*CLPFWA
Trigger: AGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR GCA 90 bp CCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCACAGAGCTTAGTGGGGTaGCGTGGGATGTGGACGTGG +
Preference number: 2 (lower is better)
Translates to: PAWRDTICILSFPLRYKSQSLVG*RGMWTW
Trigger: CCACGTCCACATCCCACGGCACCCCACTAAGCTCTG...TGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CCA 90 bp CATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: HGKPGVLHGELEPHDHTSCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...GGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 2 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELTGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp CACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: HDLHSQLPTSVQVRHHWWLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...CCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp CAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 2 (lower is better)
Translates to: QLPTSVQVRHHWWEGALDPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...GTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCACCTCCGTTAAGGCTTaGAGAGTTAAGAACCGAGGG +
Preference number: 2 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFTSVKA*RVKNRG
Trigger: CCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGT...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR TCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCTTGAGGCTGGGAGCTTaGGAACAGCCTGGGCTACTC +
Preference number: 2 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVLRLGA*EQPGLL
Trigger: GAGTAGCCCAGGCTGTTCTCAAGCTCCCAGCCTCAA...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR GCA 90 bp CCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCACGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: PAWRDTICILSFPLRYKSRALQV*AQFPSR
Trigger: TCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCG...TGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR CCA 90 bp CTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 2 (lower is better)
Translates to: LPAWRDTICILSFPLRYKVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...CTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGGTGCAGAGAGACACTaGGGATCCCGGGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLGAERH*GSRGSP
Trigger: TGGGCTCCCCCGGGATCCCCAGTGTCTCTCTGCACC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTTAAGAACCGAGGGATaGGTGGAGGTGCAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFLRTEG*VEVQRD
Trigger: GTCTCTCTGCACCTCCACCCATCCCTCGGTTCTTAA...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGGGCTCACCCGGGCTCTaGCAGAGCCCACCCGTCAGA +
Preference number: 2 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQGSPGL*QSPPVR
Trigger: TCTGACGGGTGGGCTCTGCCAGAGCCCGGGTGAGCC...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CCA 90 bp GCCAGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 2 (lower is better)
Translates to: ASVEMPMGNPGSCTVSLSVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...GCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp TCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGCGTGGGATGTGGACGTaGCGCGAAGTTCTAAGTGGA +
Preference number: 2 (lower is better)
Translates to: SVQVRHHWWEGALDLVKQRGMWT*REVLSG
Trigger: TCCACTTAGAACTTCGCGCCACGTCCACATCCCACG...CTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR TCA 90 bp CAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTGTCTCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 2 (lower is better)
Translates to: QVRHHWWEGALDLVKQLSPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...AGACAACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp TCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SQLPTSVQVRHHWWEGALPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...GAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCCCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp TCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 2 (lower is better)
Translates to: SRPHFPPGETRSAFSASHTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...GTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTTAAGAACCGAGGGATaGGTGGAGGTGCAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGLRTEG*VEVQRD
Trigger: GTCTCTCTGCACCTCCACCCATCCCTCGGTTCTTAA...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp CGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGCGCGAAGTTCTAAGTaGATCTCAAGGCCACGTGCT +
Preference number: 2 (lower is better)
Translates to: RPHFPPGETRSAFSASHFARSSK*ISRPRA
Trigger: AGCACGTGGCCTTGAGATCCACTTAGAACTTCGCGC...GAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CCA 90 bp CACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAACGTGGGATGTGGACGTaGCGCGAAGTTCTAAGTGGA +
Preference number: 2 (lower is better)
Translates to: HFGTSQTPLVGRSSRPRERGMWT*REVLSG
Trigger: TCCACTTAGAACTTCGCGCCACGTCCACATCCCACG...TTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR TCA 90 bp CGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGACCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 2 (lower is better)
Translates to: RSAFSASHFGTSQTPLVGPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...TCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGTTCTGGAGGCAGCTTaGCTCACGGCGACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLVLEAA*LTATFL
Trigger: CAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAAC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR TCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTACCTCCGTTAAGGCTTaGAGAGTTAAGAACCGAGGG +
Preference number: 2 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGTSVKA*RVKNRG
Trigger: CCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR TCA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGGGACCACGTAGTCACTaGCTGGAGGACAATCTGTTT +
Preference number: 2 (lower is better)
Translates to: TTLPAWRDTICILSFPLRGPRSH*LEDNLF
Trigger: AAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CCA 90 bp TGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 2 (lower is better)
Translates to: WRDTICILSFPLRYKSDTVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...GGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp GGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCAGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 2 (lower is better)
Translates to: GETRSAFSASHFGTSQTPVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...TGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp GCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 2 (lower is better)
Translates to: AFSASHFGTSQTPLVGRSTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...GCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp AGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 2 (lower is better)
Translates to: RHDLHSQLPTSVQVRHHWRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...CCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp ACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: TTTLPAWRDTICILSFPLELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGATATTTGCCAAAGGGTaGCGGACGCCAAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLIFAKG*RTPREG
Trigger: GCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATAT...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR TCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGTGCTCAGCGAGCCTGTaGTGGACCATCCCAAATGGA +
Preference number: 2 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPECSASL*WTIPNG
Trigger: TCCATTTGGGATGGTCCATCACAGGCTCGCTGAGCA...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR TCA 90 bp GGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGGACCACGTAGTCACTaGCTGGAGGACAATCTTCCC +
Preference number: 2 (lower is better)
Translates to: GALDLVKQLSRKVLVLHTGPRSH*LEDNLP
Trigger: GGGAAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...AGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR TCA 90 bp GAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGGGAGGAAGGATCTCTTaGGGCTGGGAGCTTGAGAAC +
Preference number: 2 (lower is better)
Translates to: EKSWYSTLLRLSNFSVRLGGRIS*GWELEN
Trigger: GTTCTCAAGCTCCCAGCCTCAAGAGATCCTTCCTCC...CAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGGGACAGACGGTGGCTaGTGTCTTCCTTTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLGTDGG*CLPFWA
Trigger: AGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR GCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGACCTACAGGACGGCCTaGCTCTTCGGGACAGACGGT +
Preference number: 2 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQTYRTA*LFGTDG
Trigger: ACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CCA 90 bp CAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTGTCTGTGACTTCAAATACCTaGGCATACGACGAGGCCCTT +
Preference number: 2 (lower is better)
Translates to: QVRHHWWEGALDLVKQLSVTSNT*AYDEAL
Trigger: AAGGGCCTCGTCGTATGCCCAGGTATTTGAAGTCAC...AGACAACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400421.6
3UTR-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGGTGCAGAGAGACACTaGGGATCCCGGGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLGAERH*GSRGSP
Trigger: TGGGCTCCCCCGGGATCCCCAGTGTCTCTCTGCACC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGGTGCAGAGAGACACTaGGGATCCCGGGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRGAERH*GSRGSP
Trigger: TGGGCTCCCCCGGGATCCCCAGTGTCTCTCTGCACC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCCCTTCATCTGCCCCTaGGCTGTGGCTCCTCTAGGA +
Preference number: 2 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLPFICP*AVAPLG
Trigger: TCCTAGAGGAGCCACAGCCCAGGGGCAGATGAAGGG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR GCA 90 bp CACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAATGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: HFGTSQTPLVGRSSRPREWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...TTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR GCA 90 bp ACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: TTTLPAWRDTICILSFPLWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR GCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGGGGACAGACGGTGGCTaGTGTCTTCCTTTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQGTDGG*CLPFWA
Trigger: AGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCC...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR GCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACAGCACCCCCAGGACTaGCCCCGTCTTCCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVQHPQD*PRLPQP
Trigger: GGGCTGCGGAAGACGGGGGCAGTCCTGGGGGTGCTG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR GCA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTTTTCCAACCTTCTGTaGTCACGAAAGGGACAGGAT +
Preference number: 2 (lower is better)
Translates to: TTLPAWRDTICILSFPLRFSNLL*SRKGQD
Trigger: ATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAA...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR GCA 90 bp TGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACATGGAAAGTTTTTCCAACCTTCTGTaGTCACGAAAGGGACAGGAT +
Preference number: 2 (lower is better)
Translates to: CPGAPEQLHTPVNPDMESFSNLL*SRKGQD
Trigger: ATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAA...ACTTTCCATGTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CCA 90 bp CAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCACGTAGTCACTGACTaGAGGACAATCTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: QLPTSVQVRHHWWEGALDHVVTD*RTICFP
Trigger: TGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTG...GTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR TCA 90 bp GGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: GALDLVKQLSRKVLVLHTELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...AGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp GGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCATGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: GETRSAFSASHFGTSQTPCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...TGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGTGCTGTCTTCCTTTCTaGGCTCACCCGGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRCCLPF*AHPGSG
Trigger: GCCAGAGCCCGGGTGAGCCCAGAAAGGAAGACAGCA...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGATGGACCATCCCAAATaGAGCATCCAGCACAACCAG +
Preference number: 2 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPEMDHPK*SIQHNQ
Trigger: CTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCAT...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CCA 90 bp TCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCCACGTAGTCACTGACTaGAGGACAATCTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: SQLPTSVQVRHHWWEGALHVVTD*RTICFP
Trigger: TGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTG...GAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR TCA 90 bp TCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 2 (lower is better)
Translates to: SVRLWFTIFIVTSNTWALVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...CAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 2 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR GCA 90 bp TGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: WRDTICILSFPLRYKSDTWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...GGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGGGACAGACGGTGGCTaGTGTCTTCCTTTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRGTDGG*CLPFWA
Trigger: AGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp AGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 2 (lower is better)
Translates to: SCLEKSWYSTLLRLSNFSTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...GGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGTTAAGAACCGAGGGATaGGTGGAGGTGCAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLLRTEG*VEVQRD
Trigger: GTCTCTCTGCACCTCCACCCATCCCTCGGTTCTTAA...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CCA 90 bp CTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 2 (lower is better)
Translates to: LLRLSNFSVRLWFTIFIVRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...CACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp CACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 2 (lower is better)
Translates to: HFGTSQTPLVGRSSRPREVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...TTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGACCTCCGTTAAGGCTTaGAGAGTTAAGAACCGAGGG +
Preference number: 2 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQTSVKA*RVKNRG
Trigger: CCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGT...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGACCTCCGTTAAGGCTTaGAGAGTTAAGAACCGAGGG +
Preference number: 2 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLTSVKA*RVKNRG
Trigger: CCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR TCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTCTTGATCAGAATCTGTaGTCCACACATATTACCCAC +
Preference number: 2 (lower is better)
Translates to: RACDGPSQMEHPAQPATFLDQNL*STHITH
Trigger: GTGGGTAATATGTGTGGATCACAGATTCTGATCAAG...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CCA 90 bp TCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 2 (lower is better)
Translates to: SVRLWFTIFIVTSNTWALVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...CAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGTTCTGGAGGCAGCTTaGCTCACGGCGACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVVLEAA*LTATFL
Trigger: CAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAAC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR GCA 90 bp TGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACATTTTCCAACCTTCTGTaGTCACGAAAGGGACAGGAT +
Preference number: 2 (lower is better)
Translates to: WYSTLLRLSNFSVRLWFTFSNLL*SRKGQD
Trigger: ATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAA...TGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CCA 90 bp CAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTCCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 2 (lower is better)
Translates to: QVVVYNLYCDFKYLGIGFPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...AAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR CAA 90 bp TCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATAC +
Preference number: 2 (lower is better)
Translates to: SWYSTLLRLSNFSVR*WFTIFIVTSNTWAY
Trigger: GTATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400421.6
3UTR CAA 90 bp TCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTG +
Preference number: 2 (lower is better)
Translates to: SWYSTLLRLSNFSVR*WFTIFIVTSNTWAL
Trigger: CAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTCTTGCACCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 2 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGLAPGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGGTGCAAG...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR GCA 90 bp ACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: TLLRLSNFSVRLWFTIFIWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...AATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CCA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTCACGTAGTCACTGACTaGAGGACAATCTTGCACCTG +
Preference number: 2 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGHVVTD*RTILHL
Trigger: CAGGTGCAAGATTGTCCTCCAGTCAGTGACTACGTG...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497243.5
3UTR-3UTR TCA 90 bp AGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTGGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: RLWFTIFIVTSNTWALVLELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...CAAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR TCA 90 bp AGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTGGGACCACGTAGTCACTaGCTGGAGGACAATCTGTTT +
Preference number: 2 (lower is better)
Translates to: RLWFTIFIVTSNTWALVLGPRSH*LEDNLF
Trigger: AAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...CAAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CCA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTCACGTAGTCACTGACTaGAGGACAATCTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGHVVTD*RTICFP
Trigger: TGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTG...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR TCA 90 bp GTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTGATCATAGAAACACTCATTaGCATCTTGCACCTGGACGC +
Preference number: 2 (lower is better)
Translates to: VVVYNLYCDFKYLGIGFDHRNTH*HLAPGR
Trigger: GCGTCCAGGTGCAAGATGTCAATGAGTGTTTCTATG...ATCAAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR GCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGAAATATTCTATATTTaGCAAAGGGTGACGGACGCC +
Preference number: 2 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVEIFYI*QRVTDA
Trigger: GGCGTCCGTCACCCTTTGGCAAATATAGAATATTTC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CAA 90 bp TTATTTCTGCTTATTGAAAAGGTTGTCACATTAATCGAGTGCCTTTaGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGG +
Preference number: 2 (lower is better)
Translates to: LFLLIEKVVTLIECL*SRCRVNKSNTLVHR
Trigger: CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAATGTGACAACCTTTTCAATAAGCAGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CCA 72 bp AGGCCTGGGAGGTCTAGGCTGCGGGGGCCGCGCGGGTaGTGGTGTAGCCGCAGCACCCCCAGGACTGCCCCC +
Preference number: 3 (lower is better)
Translates to: RPGRSRLRGPRG*WCSRSTPRTAP
Trigger: GGGGGCAGTCCTGGGGGTGCTGCGGCTACACCACCACCCGCGCGGCCCCCGCAGCCTAGACCTCCCAGGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CCA 72 bp GCGTGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCACTCCAGCCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: AWWRRRPRTPGS*SSPCTALQPPA
Trigger: GGCTGGAGGCTGGAGTGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR GCA 72 bp GCCAGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTCACGACCACACTTCCC +
Preference number: 3 (lower is better)
Translates to: ASVEMPMGNPGS*TVSLSLTTTLP
Trigger: GGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR CCA 72 bp CTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTaGGCTCACCCGGGCTCTGGCAGAGCCCACCCGTCA +
Preference number: 3 (lower is better)
Translates to: LFGTDGGCCLPF*AHPGSGRAHPS
Trigger: TGACGGGTGGGCTCTGCCAGAGCCCGGGTGAGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGGTTCTGGAGGCAGCTaGACTCACGGCGACCTTCCT +
Preference number: 3 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCGSGGS*THGDLP
Trigger: AGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR GCA 72 bp CTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTaGCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCT +
Preference number: 3 (lower is better)
Translates to: LGCGSSRTYRTA*LFGTDGGCCLP
Trigger: AGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CCA 72 bp CCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTaGATGCTCAGCGAGCCTGTGATGGACCATCCCAAA +
Preference number: 3 (lower is better)
Translates to: PPQRAQHSTGPR*MLSEPVMDHPK
Trigger: TTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CAA 90 bp GCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 3 (lower is better)
Translates to: AHGKPGVLHGELEPHDHTSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...AGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp GCGTGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: AWWRRRPRTPGSWSSPCTTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...TGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR CCA 72 bp CGGGACATGACTTGGGAAGAACCAGAGATGCGTTTCTaGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCT +
Preference number: 3 (lower is better)
Translates to: RDMTWEEPEMRF*PPQRAQHSTGP
Trigger: AGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGGTTCTGGAGGCAGCTaGACTCACGGCGACCTTCCT +
Preference number: 3 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLGSGGS*THGDLP
Trigger: AGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR TCA 72 bp TTCAGCTTCCGTGGAGACGTGGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAGCCCTCCAGGTTTGCG +
Preference number: 3 (lower is better)
Translates to: FSFRGDVAGASW*QTHQYEPSRFA
Trigger: CGCAAACCTGGAGGGCTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR TCA 72 bp ACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTaGTGGACCATCCCAAATGGAGCATCCAGCACAACC +
Preference number: 3 (lower is better)
Translates to: TAPALVGCSASL*WTIPNGASSTT
Trigger: GGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR GCA 72 bp CTGGTGACAGACGCACCAGTACGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGAGCAGGCATTGAGCTC +
Preference number: 3 (lower is better)
Translates to: LVTDAPVRALQV*AQFPSRAGIEL
Trigger: GAGCTCAATGCCTGCTCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGTACTGGTGCGTCTGTCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR CCA 72 bp CTGCAGAGCTTAGTGGGGTGCCGTGGGATGTGGACGTaGCGCGAAGTTCTAAGTGGATCTCAAGGCCACGTG +
Preference number: 3 (lower is better)
Translates to: LQSLVGCRGMWT*REVLSGSQGHV
Trigger: CACGTGGCCTTGAGATCCACTTAGAACTTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CAA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGCAGCACCGGCCCTCGTaGGATGCTCAGCGAGCCTGT +
Preference number: 3 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPEQHRPS*DAQRAC
Trigger: ACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTG...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR CCA 72 bp CCTCCGTTAAGGCTTGAAGAGTTAAGAACCGAGGGATaGGTGGAGGTGCAGAGAGACACTGGGGATCCCGGG +
Preference number: 3 (lower is better)
Translates to: PPLRLEELRTEG*VEVQRDTGDPG
Trigger: CCCGGGATCCCCAGTGTCTCTCTGCACCTCCACCCATCCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CCA 72 bp AATCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGACAGACGCACCAGTACG +
Preference number: 3 (lower is better)
Translates to: NLPTPGSASVET*LELPGDRRTST
Trigger: CGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR CCA 72 bp TGGAGGACAATCTTCCCACTCCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTCCTGGTGACAGACGCA +
Preference number: 3 (lower is better)
Translates to: WRTIFPLQVQLP*RRGWSFLVTDA
Trigger: TGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTGTCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR-3UTR CAA 90 bp GACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: DHTSRLERHDLHSQLPTSSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...CGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR TCA 72 bp AGAGCCCACCCGTCAGAGCAGACCTCCGTTAAGGCTTaGAGAGTTAAGAACCGAGGGATGGGTGGAGGTGCA +
Preference number: 3 (lower is better)
Translates to: RAHPSEQTSVKA*RVKNRGMGGGA
Trigger: TGCACCTCCACCCATCCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGTCTGCTCTGACGGGTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR CCA 72 bp GCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTaGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: APQLTSEQRDMT*EEPEMRFWPPQ
Trigger: CTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR CCA 72 bp AGTTCTCTGCAGAGCTTAGTGGGGTGCCGTGGGATGTaGACGTGGCGCGAAGTTCTAAGTGGATCTCAAGGC +
Preference number: 3 (lower is better)
Translates to: SSLQSLVGCRGM*TWREVLSGSQG
Trigger: GCCTTGAGATCCACTTAGAACTTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CAA 90 bp CCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCATCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: PAWRDTICILSFPLRYKSSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...TGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp GCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: AFSASHFGTSQTPLVGRSTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...GCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR GCA 72 bp CTCACGACCACACTTCCCGCCTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTTCGGTACAAGTCAGAC +
Preference number: 3 (lower is better)
Translates to: LTTTLPAWRDTI*ILSFPLRYKSD
Trigger: GTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR CCA 72 bp CAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTCGTGAAGCAGTTGTCT +
Preference number: 3 (lower is better)
Translates to: QLPTSVQVRHHW*EGALDLVKQLS
Trigger: AGACAACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR CCA 72 bp TCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTaGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTG +
Preference number: 3 (lower is better)
Translates to: SQLPTSVQVRHH*WEGALDLVKQL
Trigger: CAACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp GCCAGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 3 (lower is better)
Translates to: ASVEMPMGNPGSCTVSLSNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...GCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp CGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGATCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: RSAFSASHFGTSQTPLVGSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...TCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp GGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 3 (lower is better)
Translates to: GALDLVKQLSRKVLVLHTSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...AGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGGTTCTGGAGGCAGCTaGACTCACGGCGACCTTCCT +
Preference number: 3 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLGSGGS*THGDLP
Trigger: AGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CAA 90 bp TCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACACACTCATTGACATCTaGCACCTGGACGCTGATCAC +
Preference number: 3 (lower is better)
Translates to: SRPHFPPGETRSAFSASHTLIDI*HLDADH
Trigger: GTGATCAGCGTCCAGGTGCAAGATGTCAATGAGTGT...GTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
3UTR CCA 72 bp TGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATaGAGCATCCAGCACAACCAGCCACATTTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: WMLSEPVMDHPK*SIQHNQPHFSV
Trigger: GACACTGAAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CAA 90 bp GACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: DLVKQLSRKVLVLHTAAVSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...AACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp GAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: ETRSAFSASHFGTSQTPLSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...CAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGTTAATCGAGTGCCTTTaGAGTCGCTGTCGTGTAAAT +
Preference number: 3 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWLIECL*SRCRVN
Trigger: ATTTACACGACAGCGACTCAAAAGGCACTCGATTAA...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR-3UTR CAA 90 bp GACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGTCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 3 (lower is better)
Translates to: DHTSRLERHDLHSQLPTSSNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...CGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 3 (lower is better)
Translates to: TTLPAWRDTICILSFPLRSNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR GCA 72 bp GAATCTATAGACAGTTCTCTGCAGAGCTTAGTGGGGTaGCGTGGGATGTGGACGTGGCGCGAAGTTCTAAGT +
Preference number: 3 (lower is better)
Translates to: ESIDSSLQSLVG*RGMWTWREVLS
Trigger: ACTTAGAACTTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACTGTCTATAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
3UTR-3UTR CAA 90 bp CCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 3 (lower is better)
Translates to: PAWRDTICILSFPLRYKSDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...TGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 3 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGGTTCTGGAGGCAGCTaGACTCACGGCGACCTTCCT +
Preference number: 3 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRGSGGS*THGDLP
Trigger: AGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR-3UTR CAA 90 bp CTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 3 (lower is better)
Translates to: LEKSWYSTLLRLSNFSVRDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp GGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTTCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 3 (lower is better)
Translates to: GALDLVKQLSRKVLVLHTSNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...AGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp CCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 3 (lower is better)
Translates to: PAWRDTICILSFPLRYKSNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...TGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp ACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 3 (lower is better)
Translates to: TSVQVRHHWWEGALDLVKNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...CTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 3 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp AGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 3 (lower is better)
Translates to: SCLEKSWYSTLLRLSNFSDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...GGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp CGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGAAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 3 (lower is better)
Translates to: RLERHDLHSQLPTSVQVRNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...TCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR-3UTR CAA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
3UTR TCA 72 bp ACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTaGCTTCAAATACCTGGGCATACGACGAGGCCCTTA +
Preference number: 3 (lower is better)
Translates to: TSPSGCGLQSLL*LQIPGHTTRPL
Trigger: TAAGGGCCTCGTCGTATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400421.6
3UTR-3UTR CAA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTTTAATCGAGTGCCTTTaGAGTCGCTGTCGTGTAAAT +
Preference number: 3 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLLIECL*SRCRVN
Trigger: ATTTACACGACAGCGACTCAAAAGGCACTCGATTAA...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
3UTR TCA 72 bp CAGCACAACCAGCCACATTTCAGTGTCTTATGCGATTaGTTCTACTTGATCAGAATCTGTGATCCACACATA +
Preference number: 3 (lower is better)
Translates to: QHNQPHFSVLCD*FYLIRICDPHI
Trigger: TATGTGTGGATCACAGATTCTGATCAAGTAGAATCAATCGCATAAGACACTGAAATGTGGCTGGTTGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
3UTR TCA 72 bp TGTCTTATGCGATTGATTCTACTTGATCAGAATCTGTaGTCCACACATATTACCCACTGTCATTCTTTACTG +
Preference number: 3 (lower is better)
Translates to: CLMRLILLDQNL*STHITHCHSLL
Trigger: CAGTAAAGAATGACAGTGGGTAATATGTGTGGATCACAGATTCTGATCAAGTAGAATCAATCGCATAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCTGCGCGGGAGGGGGTaGCGTCCCTGGTGGTACGGC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGLRGRG*RPWWYG
Trigger: GCCGTACCACCAGGGACGCCACCCCCTCCCGCGCAG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGTCTGGGGTCCAGGCCTaGCCTGCTGCCGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGSGVQA*PAAGVP
Trigger: GGGCACCCCGGCAGCAGGCCAGGCCTGGACCCCAGA...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCAGCACCCCCAGGACTaGCCCCGTCTTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGQHPQD*PRLPQP
Trigger: GGGCTGCGGAAGACGGGGGCAGTCCTGGGGGTGCTG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGACCCGGGGCAGTGCTaGGCACCTCCTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGDPGQC*APPAPR
Trigger: GCGTGGAGCAGGAGGTGCCCAGCACTGCCCCGGGTC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCGGCCTGCTGCCGGGGTaGCCTGAGGGTACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCGLLPG*PEGTQD
Trigger: GTCCTGGGTACCCTCAGGGCACCCCGGCAGCAGGCC...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGCACCAGGCAGCCGGTaGGCAGTCGTGTTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCAPGSR*AVVFRA
Trigger: AGCGCGGAACACGACTGCTCACCGGCTGCCTGGTGC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTAGGGGGTGGCGTCCCTaGTGGTACGGCACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCRGWRP*WYGTGR
Trigger: CCTGCCAGTGCCGTACCACCAGGGACGCCACCCCCT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCTGCGCGGGAGGGGGTaGCGTCCCTGGTGGTACGGC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLLRGRG*RPWWYG
Trigger: GCCGTACCACCAGGGACGCCACCCCCTCCCGCGCAG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCGCAGGCCCCAGGTCTTaGCGTGAACTGCCCGGACTG +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCAGPRS*RELPGL
Trigger: CAGTCCGGGCAGTTCACGTCAAGACCTGGGGCCTGC...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGTTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGFPGAE*RWWTVE
Trigger: CTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GCCAGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: ASVEMPMGNPGSCTVSLSGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...GCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCCAGGCCTGGCCTGCTaGCGGGGTGCCCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPPGLAC*RGALRV
Trigger: TACCCTCAGGGCACCCCGGCAGCAGGCCAGGCCTGG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGTCCACCGCCCATaGGGCTCACCAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGTVHRP*GSPGHP
Trigger: AGGGTGACCTGGTGAGCCCCATGGGCGGTGGACTGT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTTGCTGCCCCCTCTTCTaGGTGAGGGCTCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCCCPLF*VRALGS
Trigger: GGACCCCAGAGCCCTCACCCAGAAGAGGGGGCAGCA...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCCCCGGGTGGAACGGGTaGCATGCCACAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCPGWNG*HATGSG
Trigger: GCCACTTCCTGTGGCATGCCACCCGTTCCACCCGGG...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGTGAAGCCGCTGGCCTaGCTTGGGCCCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCVKPLA*LGPTAL
Trigger: CAGTGCTGTGGGCCCAAGCCAGGCCAGCGGCTTCAC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGGCGTTCCCAGGGGCTaGGTGCAGGTGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLGVPRG*VQVVDG
Trigger: ACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCACTCCGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: GDVGPAPLVAGLHPVQHSVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...GGAGTGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGCACCAGGCAGCCGGTaGGCAGTCGTGTTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLAPGSR*AVVFRA
Trigger: AGCGCGGAACACGACTGCTCACCGGCTGCCTGGTGC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCCCAGCGTCCATGTGCTaGCACATGGTGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCPASMC*HMVAGR
Trigger: CCTGCCAGCCACCATGTGTCAGCACATGGACGCTGG...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGVEAIG*RALVTK
Trigger: CTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCAC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCACTCCGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GDVGPAPLVAGLHPVQHSGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...GGAGTGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp GCCAGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASVEMPMGNPGSCTVSLSGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...GCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGACCGTTACCCCTGTTaGCGCAGACAGTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCDRYPC*RRQSTA
Trigger: GGCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCCAGACCCGGGGCAGTaGTGGGCACCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLPDPGQ*WAPPAP
Trigger: TGGAGCAGGAGGTGCCCAGCACTGCCCCGGGTCTGG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGTGGGGCTGGTGCCTTaGACAAAGGCAGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGVGLVP*TKAALV
Trigger: GACCAAGGCTGCCTTTGTGCAAGGCACCAGCCCCAC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCACCGGCACCCAGGCCTaGTTCTGCATGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCTGTQA*FCMRRL
Trigger: GAGCCTCCTCATGCAGAAGCAGGCCTGGGTGCCGGT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCAGCACCCCCAGGACTaGCCCCGTCTTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLQHPQD*PRLPQP
Trigger: GGGCTGCGGAAGACGGGGGCAGTCCTGGGGGTGCTG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCGACGGTGGAGGCCATTaGTTGCAGGGCGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCDGGGH*LQGAGD
Trigger: GTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTC...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCGAECR*WTVEAI
Trigger: AATGGCCTCCACCGTCCACCACCTGCACTCAGCCCC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HGKPGVLHGELEPHDHTSAATLW*RRSQGL
Trigger: CAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGC...GGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPAAATL*WRRSQG
Trigger: CCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HGKPGVLHGELEPHDHTSAAATL*WRRSQG
Trigger: CCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGC...GGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCTGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTTCCAGGGAGGGCCAGTaGGCCATCTGTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPSREGQ*AICGPR
Trigger: CCTGGGGCCACAGATGGCCCACTGGCCCTCCCTGGA...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGCCTCCCATGCCAGGTaGAAGCCGGTGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCASHAR*KPVLVT
Trigger: TGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGAGGCCTCTCTGGGCTaGTGGCCCAGGTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGEASLG*WPRFHC
Trigger: GCAATGAAACCTGGGCCACCAGCCCAGAGAGGCCTC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGGTGAGAGGCCTCTCTaGGCTGGTGGCCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCGERPL*AGGPGF
Trigger: GAAACCTGGGCCACCAGCCCAGAGAGGCCTCTCACC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGGCTCACCCGGGCTCTaGCAGAGCCCACCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPGSPGL*QSPPVR
Trigger: TCTGACGGGTGGGCTCTGCCAGAGCCCGGGTGAGCC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGGCTCACCCGGGCTCTaGCAGAGCCCACCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLGSPGL*QSPPVR
Trigger: TCTGACGGGTGGGCTCTGCCAGAGCCCGGGTGAGCC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
3UTR CAA 72 bp GCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTaGGATGCTCAGCGAGCCTGTGATGGACCATCCCAA +
Preference number: 4 (lower is better)
Translates to: ASPACPTQHRPS*DAQRACDGPSQ
Trigger: TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGGCGTTCCCAGGGGCTaGGTGCAGGTGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLGVPRG*VQVVDG
Trigger: ACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GCGTGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 4 (lower is better)
Translates to: AWWRRRPRTPGSWSSPCTAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...TGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTCACCTTCAGACCGGATaGGGGGTCCCCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCHLQTG*GVPRTS
Trigger: AGATGTCCTGGGGACCCCTCATCCGGTCTGAAGGTG...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGAGGCCTGCTTCTGCATaGGGAGGCTCACCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGRPASA*GGSPSD
Trigger: GTCTGAAGGTGAGCCTCCTCATGCAGAAGCAGGCCT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGTTCTGGAGGCAGCTTaGCTCACGGCGACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCVLEAA*LTATFL
Trigger: CAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAAC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCAAGATCCGCCTCCCATaGCAGGTGGAAGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCKIRLP*QVEAGA
Trigger: AGCACCGGCTTCCACCTGGCATGGGAGGCGGATCTT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTAAGATCCGCCTCCCATaGCAGGTGGAAGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCKIRLP*QVEAGA
Trigger: AGCACCGGCTTCCACCTGGCATGGGAGGCGGATCTT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGAGGCAGCCTTGGTCCCTaGTGTGGTGAGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RCVSGLPSVPNTAPALVGGSLGP*CGERPL
Trigger: GAGAGGCCTCTCACCACAGCAGGGACCAAGGCTGCC...TCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGCACGTGTGTGCCATTaGTGTGGCTCACGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGARVCH*CGSRCR
Trigger: CCTGCAACGTGAGCCACAGCAATGGCACACACGTGC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCTCCGGGGGATTCCATaGAGACGCGGAGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGLRGIP*RRGVCS
Trigger: ACTGCAAACTCCGCGTCTGCATGGAATCCCCCGGAG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTACCTACAGGACGGCCTaGCTCTTCGGGACAGACGGT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCTYRTA*LFGTDG
Trigger: ACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCACCTACAGGACGGCCTaGCTCTTCGGGACAGACGGT +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCTYRTA*LFGTDG
Trigger: ACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCACAGGGTCCCTCTCTaGAGCTTGGGGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLHRVPL*SLGCRG
Trigger: GCCCCTGCACCCCAAGCTCCAGAGAGGGACCCTGTG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCACAGGGTCCCTCTCTaGAGCTTGGGGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPHRVPL*SLGCRG
Trigger: GCCCCTGCACCCCAAGCTCCAGAGAGGGACCCTGTG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGAGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: RCVSGLPSVPNTAPALVGGAECR*WTVEAI
Trigger: AATGGCCTCCACCGTCCACCACCTGCACTCAGCCCC...TCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: DAHGKPGVLHGELEPHDHGAECR*WTVEAI
Trigger: AATGGCCTCCACCGTCCACCACCTGCACTCAGCCCC...GTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCACCCAGCAGGGTaGAGACGTCAGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCCHPAG*RRQPQA
Trigger: TGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACA...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGAGGGGGTGGCGTCCCTaGTGGTACGGCACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWRGWRP*WYGTGR
Trigger: CCTGCCAGTGCCGTACCACCAGGGACGCCACCCCCT...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTTGGAGTTCGCGTGGCTaGTGCTCCGCTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPWSSRG*CSAGWG
Trigger: ACCCCAGCCAGCGGAGCACCAGCCACGCGAACTCCA...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTGGAGTTCGCGTGGCTaGTGCTCCGCTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLWSSRG*CSAGWG
Trigger: ACCCCAGCCAGCGGAGCACCAGCCACGCGAACTCCA...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCCAGGAGGGAAGCTGTaGGTTGACCCAGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGPGGKL*VDPVAF
Trigger: GAAGGCTACTGGGTCAACCCACAGCTTCCCTCCTGG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCGCATGCCACAGGAAGTaGCCGGTGGGGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCACHRK*PVGSSV
Trigger: TACTGAGGACCCCACCGGCCACTTCCTGTGGCATGC...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCCCGGGTGGAACGGGTaGCATGCCACAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPPGWNG*HATGSG
Trigger: GCCACTTCCTGTGGCATGCCACCCGTTCCACCCGGG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGTGTGTGCCATTGCTGTaGCTCACGTTGCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGCVPLL*LTLQEG
Trigger: CCCCTCCTGCAACGTGAGCCACAGCAATGGCACACA...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGCTGTCTTCCTTTCTaGGCTCACCCGGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCCCLPF*AHPGSG
Trigger: GCCAGAGCCCGGGTGAGCCCAGAAAGGAAGACAGCA...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTTGCTGTCTTCCTTTCTaGGCTCACCCGGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCCCLPF*AHPGSG
Trigger: GCCAGAGCCCGGGTGAGCCCAGAAAGGAAGACAGCA...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCATGGAGGGAAGCCCTaGGAAGCCATGGAGATTGGA +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGHGGKP*EAMEIG
Trigger: TCCAATCTCCATGGCTTCTCAGGGCTTCCCTCCATG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR TCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCCCCCAGGTCTTGACGTaGACTGCCCGGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCPQVLT*TARTDS
Trigger: TGAATCAGTCCGGGCAGTTCACGTCAAGACCTGGGG...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 4 (lower is better)
Translates to: DAHGKPGVLHGELEPHDHAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...GTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp AGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGAGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 4 (lower is better)
Translates to: RCVSGLPSVPNTAPALVGAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...TCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp TGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCAGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 4 (lower is better)
Translates to: WWRRRPRTPGSWSSPCTAAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGCACCAGGCAGCCGGTaGGCAGTCGTGTTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFAPGSR*AVVFRA
Trigger: AGCGCGGAACACGACTGCTCACCGGCTGCCTGGTGC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGGGTCTTCAGAGCTGTaGGGGTGGAGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCGSSEL*GWRSMA
Trigger: TGCCATTGACCTCCACCCTCACAGCTCTGAAGACCC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTTCTCACAGAGCACCCTaGCTGCTCCGGTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCSHRAP*LLRSGS
Trigger: TGAACCTGACCGGAGCAGTCAGGGTGCTCTGTGAGA...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTCTTCAGGTGGTGGATaGTGCCCTCCTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCSSGGG*CPPGTG
Trigger: ACCTGTCCCAGGAGGGCATCATCCACCACCTGAAGA...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGCCCCACTTCGATCCTaGCATCGTCACTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCAPLRS*HRHWQT
Trigger: TGTCTGCCAGTGACGATGTCAGGATCGAAGTGGGGC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGCACGCGTGTCCCCTaGCGGTCAATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCCTRVP*RSIWNT
Trigger: AGTGTTCCAGATTGACCGGCAGGGGACACGCGTGCA...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGACCGTTACCCCTGTTaGCGCAGACAGTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPDRYPC*RRQSTA
Trigger: GGCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCCAGACCCGGGGCAGTaGTGGGCACCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFPDPGQ*WAPPAP
Trigger: TGGAGCAGGAGGTGCCCAGCACTGCCCCGGGTCTGG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTCGGGGATGGATTCCTaGTGCAGGAAGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCSGMDS*CRKRFW
Trigger: CCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCGA...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTCCAGGAGCACGTGTGTaGCATTGCTGTGGCTCACGT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCPGARV*HCCGSR
Trigger: ACGTGAGCCACAGCAATGGCACACACGTGCTCCTGG...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTAGCTGCAGGGGGAGGTaGATGGTTCAGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPSCRGR*MVQAPL
Trigger: CAGAGGGGCCTGAACCATCCACCTCCCCCTGCAGCT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGACGGTGGAGGCCATTaGTTGCAGGGCGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPDGGGH*LQGAGD
Trigger: GTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCACCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: WWRRRPRTPGSWSSPCTAPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp GCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: AHGKPGVLHGELEPHDHTASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...AGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGGGTGGCGTCCCTGGTaGTACGGCACTGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLGWRPW*YGTGRC
Trigger: ACACCTGCCAGTGCCGTACCACCAGGGACGCCACCC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTACAGTCCACCGCCCATaGGGCTCACCAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLTVHRP*GSPGHP
Trigger: AGGGTGACCTGGTGAGCCCCATGGGCGGTGGACTGT...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTGCTGCCCCCTCTTCTaGGTGAGGGCTCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLCCPLF*VRALGS
Trigger: GGACCCCAGAGCCCTCACCCAGAAGAGGGGGCAGCA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCTGCCCCCTCTTCTaGGTGAGGGCTCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFCCPLF*VRALGS
Trigger: GGACCCCAGAGCCCTCACCCAGAAGAGGGGGCAGCA...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTGTGCTGACACATGGTaGCTGGCAGGGAGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLCADTW*LAGSPA
Trigger: TGCGGGGCTCCCTGCCAGCCACCATGTGTCAGCACA...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCCATGTGCTGACACATaGTGGCTGGCAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPPCADT*WLAGSP
Trigger: GGGGCTCCCTGCCAGCCACCATGTGTCAGCACATGG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGGTGAGAGGCCTCTCTaGGCTGGTGGCCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPGERPL*AGGPGF
Trigger: GAAACCTGGGCCACCAGCCCAGAGAGGCCTCTCACC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTACGTTGCAGGAGGGGTaGCTGAGGTACAACGAGGAC +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCTLQEG*LRYNED
Trigger: GTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCAGGCTCACCCGGGCTCTaGCAGAGCCCACCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: GHDLGRTRDAFLASPACPGSPGL*QSPPVR
Trigger: TCTGACGGGTGGGCTCTGCCAGAGCCCGGGTGAGCC...TGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCTTCGGGACAGACGGTaGCTGCTGTCTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGLRDRR*LLSSFL
Trigger: CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTCATGGAGGGAAGCCCTaGGAAGCCATGGAGATTGGA +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCHGGKP*EAMEIG
Trigger: TCCAATCTCCATGGCTTCTCAGGGCTTCCCTCCATG...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGTTGCAGGGCGCTGGTaGCCAAGGAATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLVAGRW*PRNAEG
Trigger: GCCTTCTGCATTCCTTGGTCACCAGCGCCCTGCAAC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTAGGAGGGTGGCTCCATaGTGGAGTTTCCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCRRVAP*WSFPVA
Trigger: AGCTACAGGGAAACTCCATCATGGAGCCACCCTCCT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCCCAGCGTCCATGTGCTaGCACATGGTGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFPASMC*HMVAGR
Trigger: CCTGCCAGCCACCATGTGTCAGCACATGGACGCTGG...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCACCTTCAGACCGGATaGGGGGTCCCCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPHLQTG*GVPRTS
Trigger: AGATGTCCTGGGGACCCCTCATCCGGTCTGAAGGTG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACCCCCCAACATCAGGGTaGCCAATGGGTTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: DAHGKPGVLHGELEPHDHPPTSG*PMGSNL
Trigger: CAGGTTGGAACCCATTGGTCACCCTGATGTTGGGGG...GTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR GCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCCTCTGGAGCTTGGGGTaGAGGGGCCATGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFLWSLG*RGHAVA
Trigger: CGCTACTGCATGGCCCCTGCACCCCAAGCTCCAGAG...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GCCAGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ASVEMPMGNPGSCTVSLSSLGST*WSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCT...GCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGACCGTTACCCCTGTTaGCGCAGACAGTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFDRYPC*RRQSTA
Trigger: GGCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGTGCTGGGCACCTCCTaGTCCACGCCTTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPVLGTS*STPFPV
Trigger: CACAGGAAAAGGCGTGGAGCAGGAGGTGCCCAGCAC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGGCAGCCTTGGTCCCTaGTGTGGTGAGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFGSLGP*CGERPL
Trigger: GAGAGGCCTCTCACCACAGCAGGGACCAAGGCTGCC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTACAGAGCACCCTGACTaGTCCGGTCAGGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLTEHPD*SGQVQP
Trigger: CGGCTGAACCTGACCGGAGCAGTCAGGGTGCTCTGT...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGGGATGGATTCCTGCTaGAGGAAGCGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCGMDSC*RKRFWM
Trigger: CATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGACCAGGAGCACGTGTGTaGCATTGCTGTGGCTCACGT +
Preference number: 4 (lower is better)
Translates to: RCVSGLPSVPNTAPALVGPGARV*HCCGSR
Trigger: ACGTGAGCCACAGCAATGGCACACACGTGCTCCTGG...TCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGCAGACGCGGAGTTTaGAGTGCAGGTAGACGATGG +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCCRRGV*SAGRRW
Trigger: CCATCGTCTACCTGCACTGCAAACTCCGCGTCTGCA...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTACCTACAGGACGGCCTaGCTCTTCGGGACAGACGGT +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPTYRTA*LFGTDG
Trigger: ACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCAGCTGCAGGGGGAGGTaGATGGTTCAGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFSCRGR*MVQAPL
Trigger: CAGAGGGGCCTGAACCATCCACCTCCCCCTGCAGCT...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCACAGGGTCCCTCTCTaGAGCTTGGGGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFHRVPL*SLGCRG
Trigger: GCCCCTGCACCCCAAGCTCCAGAGAGGGACCCTGTG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTTGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: MGNPGSCTVSLSLTTTLPCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...GGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPAECRW*TVEAIG
Trigger: ACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: MGNPGSCTVSLSLTTTLPAECRW*TVEAIG
Trigger: ACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC...GGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGAATLW*RRSQGL
Trigger: CAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EPHDHTSRLERHDLHSQLAAATL*WRRSQG
Trigger: CCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGC...AAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGAAATL*WRRSQG
Trigger: CCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SVQVRHHWWEGALDLVKQAAATL*WRRSQG
Trigger: CCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGC...CTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRPHFPPGETRSAFSASHAAATL*WRRSQG
Trigger: CCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGC...GTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AHGKPGVLHGELEPHDHTQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...AGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp CTGGTGACAGACGCACCAGTACGAGCCCTCCAGGTTTGCGCACAGTTCCCTTCCACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LVTDAPVRALQVCAQFPSTGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...GGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGTACTGGTGCGTCTGTCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CCA 90 bp GACAGTTCTCTGCAGAGCTTAGTGGGGTGCCGTGGGATGTGGACGTGGCGCGAAACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: DSSLQSLVGCRGMWTWRETGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...TTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTCCCTGCCGGTCAATCTaGAACACTGTGCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCPCRSI*NTVLAN
Trigger: GTTGGCAAGCACAGTGTTCCAGATTGACCGGCAGGG...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTCTGCGCGGGAGGGGGTaGCGTCCCTGGTGGTACGGC +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFLRGRG*RPWWYG
Trigger: GCCGTACCACCAGGGACGCCACCCCCTCCCGCGCAG...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCCCGTGCCAAGACCTaGGACCGTTACCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLSRAKT*DRYPCC
Trigger: GCAACAGGGGTAACGGTCCCAGGTCTTGGCACGGGA...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGCCTCCCATGCCAGGTaGAAGCCGGTGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFASHAR*KPVLVT
Trigger: TGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGCCTCCCATGCCAGGTaGAAGCCGGTGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLASHAR*KPVLVT
Trigger: TGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCTGACACATGGTGGCTaGCAGGGAGCCCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLLTHGG*QGAPHH
Trigger: ATGGTGCGGGGCTCCCTGCCAGCCACCATGTGTCAG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTGTGCTGACACATGGTaGCTGGCAGGGAGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLCADTW*LAGSPA
Trigger: TGCGGGGCTCCCTGCCAGCCACCATGTGTCAGCACA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTGCTGACACATGGTaGCTGGCAGGGAGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFCADTW*LAGSPA
Trigger: TGCGGGGCTCCCTGCCAGCCACCATGTGTCAGCACA...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGCCATGTGCTGACACATaGTGGCTGGCAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWPCADT*WLAGSP
Trigger: GGGGCTCCCTGCCAGCCACCATGTGTCAGCACATGG...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCAGCAGAGGCACGGTCTaGAAGGCGGTGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCSRGTV*KAVRNA
Trigger: TGCATTTCTCACCGCCTTCCAGACCGTGCCTCTGCT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGAGGCCTCTCTGGGCTaGTGGCCCAGGTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPEASLG*WPRFHC
Trigger: GCAATGAAACCTGGGCCACCAGCCCAGAGAGGCCTC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGAACGTTGCAGGAGGGGTaGCTGAGGTACAACGAGGAC +
Preference number: 4 (lower is better)
Translates to: RCVSGLPSVPNTAPALVGTLQEG*LRYNED
Trigger: GTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGT...TCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTAAATTCCCAGCGCCGTaGAGGTCCTCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCKFPAP*RSSMMV
Trigger: CACCATCATCGAGGACCTCCACGGCGCTGGGAATTT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCGTTGGTGTATGTGTTaGGCACAGGGCAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGRWCMC*AQGSCC
Trigger: ACAACAGCTGCCCTGTGCCCAACACATACACCAACG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGCACGATCAGAAGGGTaGCTGTTCCCGCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLARSEG*LFPPPA
Trigger: TGCTGGTGGCGGGAACAGCCACCCTTCTGATCGTGC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTAAGGAGAGAGAGATTTaGGGTGCATGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCKEREI*GAWREA
Trigger: GGCTTCCCTCCATGCACCTCAAATCTCTCTCTCCTT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR TCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCCCCAGGTCTTGACGTaGACTGCCCGGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPPQVLT*TARTDS
Trigger: TGAATCAGTCCGGGCAGTTCACGTCAAGACCTGGGG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGTTGCAGGGCGCTGGTaGCCAAGGAATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFVAGRW*PRNAEG
Trigger: GCCTTCTGCATTCCTTGGTCACCAGCGCCCTGCAAC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGGGCGTTCCCAGGGGCTaGGTGCAGGTGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: TSVQVRHHWWEGALDLVKGVPRG*VQVVDG
Trigger: ACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCC...CTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EMPMGNPGSCTVSLSLTTPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...GGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGACCTCGCAGCTACAAGTaGAAGACCCGAGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RCVSGLPSVPNTAPALVGPRSYK*KTRGCF
Trigger: GAAACACCCTCGGGTCTTTCACTTGTAGCTGCGAGG...TCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTTCTCACAGAGCACCCTaGCTGCTCCGGTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPSHRAP*LLRSGS
Trigger: TGAACCTGACCGGAGCAGTCAGGGTGCTCTGTGAGA...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCATGTTGCTCTGCATaGGGGTCCCACACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLSCCSA*GSHTRS
Trigger: GGAGCGAGTGTGGGACCCTCATGCAGAGCAACATGA...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTAGGCCTGCTTCTGCATaGGGAGGCTCACCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLRPASA*GGSPSD
Trigger: GTCTGAAGGTGAGCCTCCTCATGCAGAAGCAGGCCT...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACCTCCGTTAAGGCTTaGAGAGTTAAGAACCGAGGG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGTSVKA*RVKNRG
Trigger: CCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLRALQV*AQFPSR
Trigger: TCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SLTTTLPAWRDTICILSFGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...GAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGAATGAGCTTCCGGGCTaGTGTCCTCACTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGNELPG*CPHFQM
Trigger: CATCTGAAAGTGAGGACAGCAGCCCGGAAGCTCATT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACAGAGCACCCTGACTaGTCCGGTCAGGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTEHPD*SGQVQP
Trigger: CGGCTGAACCTGACCGGAGCAGTCAGGGTGCTCTGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGGGGATGGATTCCTaGTGCAGGAAGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLSGMDS*CRKRFW
Trigger: CCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCGA...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTTCGTCATGTTGCTCTaGATGAGGGTCCCACACTCG +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCFVMLL*MRVPHS
Trigger: CGAGTGTGGGACCCTCATGCAGAGCAACATGACGAA...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGGTTGCTAGACGGGGTTaGCCAGCACTCCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWVARRG*PALRQD
Trigger: GTCCTGACGGAGTGCTGGGCAACCCCGTCTAGCAAC...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGTTGCTAGACGGGGTTaGCCAGCACTCCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLVARRG*PALRQD
Trigger: GTCCTGACGGAGTGCTGGGCAACCCCGTCTAGCAAC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGGGACAGACGGTGGCTaGTGTCTTCCTTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPGTDGG*CLPFWA
Trigger: AGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGCTCACCCCAGAGCCTaGGAGAGGCAGGGGACGGTT +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGAHPRA*ERQGTV
Trigger: AACCGTCCCCTGCCTCTCCCAGGCTCTGGGGTGAGC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR CCA 90 bp CCAGTACGAGCCCTCCAGGTTTGCGCACAGTTCCCTTCCAGAGCAGGCATTGAGGACGGTGGAGGCCATTaGTTGCAGGGCGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: PVRALQVCAQFPSRAGIEDGGGH*LQGAGD
Trigger: GTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTC...CTCAATGCCTGCTCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGTACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGCAGGTGGTGGACGGTaGAGGCCATTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFAGGGR*RPLVAG
Trigger: CCCTGCAACCAATGGCCTCCACCGTCCACCACCTGC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLAECRW*TVEAIG
Trigger: ACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPGETRSAFSASHFGTSQAATLW*RRSQGL
Trigger: CAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGC...CTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTGGTGACAGACGCACCAGTACGAGCCCTCCAGGTTTGCGCACAGTTCCCTTCCTGTCACCCAGCAGGGTaGAGACGTCAGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LVTDAPVRALQVCAQFPSCHPAG*RRQPQA
Trigger: TGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACA...GGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGTACTGGTGCGTCTGTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCCCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGGCTCTGTGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: LALCPGAPEQLHTPVNPDRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...GTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACACAGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGTGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACATGGAACTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LCPGAPEQLHTPVNPDMELANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...TTCCATGTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTCCCGTGCCAAGACCTaGGACCGTTACCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFSRAKT*DRYPCC
Trigger: GCAACAGGGGTAACGGTCCCAGGTCTTGGCACGGGA...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCCAGGAGGGAAGCTGTaGGTTGACCCAGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPPGGKL*VDPVAF
Trigger: GAAGGCTACTGGGTCAACCCACAGCTTCCCTCCTGG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGGCATGCCACAGGAAGTaGCCGGTGGGGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWACHRK*PVGSSV
Trigger: TACTGAGGACCCCACCGGCCACTTCCTGTGGCATGC...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGCATGCCACAGGAAGTaGCCGGTGGGGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFACHRK*PVGSSV
Trigger: TACTGAGGACCCCACCGGCCACTTCCTGTGGCATGC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCTGACACATGGTGGCTaGCAGGGAGCCCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFLTHGG*QGAPHH
Trigger: ATGGTGCGGGGCTCCCTGCCAGCCACCATGTGTCAG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGCAGCTGACACCTCCTaGACATCCACATCTGCGATT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCAADTS*TSTSAI
Trigger: AATCGCAGATGTGGATGTCCAGGAGGTGTCAGCTGC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTTTTTCACCAGTATGGTaGCGTTGTACCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCFSPVW*RCTRSP
Trigger: TGGGCTCCTGGTACAACGTCACCATACTGGTGAAAA...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGGCGTTCCCAGGGGCTaGGTGCAGGTGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: HDLHSQLPTSVQVRHHWWGVPRG*VQVVDG
Trigger: ACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCC...CCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp GAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: EPHDHTSRLERHDLHSQLVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...AAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCAGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: LTTTLPAWRDTICILSFPVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...TGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGACTGGGTGACAAGGTaGAGTTCTCTAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFDWVTR*SSLGRG
Trigger: CCCTCGGCCTAGAGAACTTCACCTTGTCACCCAGTC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGACTGGGTGACAAGGTaGAGTTCTCTAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLDWVTR*SSLGRG
Trigger: CCCTCGGCCTAGAGAACTTCACCTTGTCACCCAGTC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGGGTCTTCAGAGCTGTaGGGGTGGAGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFGSSEL*GWRSMA
Trigger: TGCCATTGACCTCCACCCTCACAGCTCTGAAGACCC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTCACATGCTTTGGCCATaGTCTCAACCAGGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCHMLWP*SQPGAR
Trigger: TCTTGCACCTGGTTGAGATCATGGCCAAAGCATGTG...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCCTCGCAGCTACAAGTaGAAGACCCGAGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLPRSYK*KTRGCF
Trigger: GAAACACCCTCGGGTCTTTCACTTGTAGCTGCGAGG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAGCCCCACTTCGATCCTaGCATCGTCACTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQAPLRS*HRHWQT
Trigger: TGTCTGCCAGTGACGATGTCAGGATCGAAGTGGGGC...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCCGTCAGGACCACCTTaGGGTTGCTTTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLPSGPP*GCFSAC
Trigger: ACAGGCAGAAAAGCAACCTCAAGGTGGTCCTGACGG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCATATTTGCCAAAGGGTaGCGGACGCCAAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFIFAKG*RTPREG
Trigger: GCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATAT...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACATGGAAAGTGTTGCAGGGCGCTGGTaGCCCAAGGTCACACAGCTG +
Preference number: 4 (lower is better)
Translates to: CPGAPEQLHTPVNPDMESVAGRW*PKVTQL
Trigger: CAGCTGTGTGACCTTGGGTCACCAGCGCCCTGCAAC...ACTTTCCATGTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR GCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPSLGST*WSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSFPLRYKSDTTGGKELSGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...CGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp AGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SLTTTLPAWRDTICILSFGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...GAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGGGCCTGCTGCCGGGGTaGCCTGAGGGTACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPEGLLPG*PEGTQD
Trigger: GTCCTGGGTACCCTCAGGGCACCCCGGCAGCAGGCC...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCCAGGTGGAAGCCGGTaGTGGTCACATTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLPGGSR*WSHWRP
Trigger: TGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCCCAGGTGGAAGCCGGTaGTGGTCACATTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFPGGSR*WSHWRP
Trigger: TGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGG...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCAAGATCCGCCTCCCATaGCAGGTGGAAGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFKIRLP*QVEAGA
Trigger: AGCACCGGCTTCCACCTGGCATGGGAGGCGGATCTT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTCTCGATACTCCTGGCTaGTTGCGTTGCGAAAGGATT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCLDTPG*LRCERI
Trigger: AATCCTTTCGCAACGCAAGCAGCCAGGAGTATCGAG...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGGGATGGATTCCTGCTaGAGGAAGCGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLGMDSC*RKRFWM
Trigger: CATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGCACGTGTGTGCCATTaGTGTGGCTCACGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLARVCH*CGSRCR
Trigger: CCTGCAACGTGAGCCACAGCAATGGCACACACGTGC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCCCAGGAGCACGTGTGTaGCATTGCTGTGGCTCACGT +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFPGARV*HCCGSR
Trigger: ACGTGAGCCACAGCAATGGCACACACGTGCTCCTGG...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGGGCCTTATTGGAGTTaGCGTTCTCAATCACGTTGG +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCGPYWS*RSQSRW
Trigger: CCAACGTGATTGAGAACGGCAACTCCAATAAGGCCC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACCCAGGCCTGCTTCTaGATGAGGAGGCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTQACF*MRRLTF
Trigger: GAAGGTGAGCCTCCTCATGCAGAAGCAGGCCTGGGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTACCGGCACCCAGGCCTaGTTCTGCATGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGTGTQA*FCMRRL
Trigger: GAGCCTCCTCATGCAGAAGCAGGCCTGGGTGCCGGT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGGGACAGACGGTGGCTaGTGTCTTCCTTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLGTDGG*CLPFWA
Trigger: AGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LSFPLRYKSDTTGGKELSVEAIG*RALVTW
Trigger: CCAGGTCACCAGCGCCCTGCAACCAATGGCCTCCAC...CGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CCA 90 bp ATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCTGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: MGNPGSCTVSLSLTTTLPCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...GGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACGCAGGTGGTGGACGGTaGAGGCCATTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRPHFPPGETRSAFSASHAGGGR*RPLVAG
Trigger: CCCTGCAACCAATGGCCTCCACCGTCCACCACCTGC...GTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CAATCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTGGCTGGAGCTTCCTGGGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: QSSHSRFSFRGDVAGASWAECRW*TVEAIG
Trigger: ACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC...CCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CCA 90 bp CTGTGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACATGGAATGTCACCCAGCAGGGTaGAGACGTCAGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LCPGAPEQLHTPVNPDMECHPAG*RRQPQA
Trigger: TGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACA...TTCCATGTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAACAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCCACGTAGTCACTGACTaGAGGACAATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCHVVTD*RTIFPL
Trigger: GAGTGGGAAGATTGTCCTCCAGTCAGTGACTACGTG...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGGACAATCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTGGCTGGAGCTTCCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RTIFPLQVQLPWRRGWSFLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCCCTGCCGGTCAATCTaGAACACTGTGCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLPCRSI*NTVLAN
Trigger: GTTGGCAAGCACAGTGTTCCAGATTGACCGGCAGGG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTACAGTCCACCGCCCATaGGGCTCACCAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGTVHRP*GSPGHP
Trigger: AGGGTGACCTGGTGAGCCCCATGGGCGGTGGACTGT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTCTGGGGTCCAGGCCTaGCCTGCTGCCGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLSGVQA*PAAGVP
Trigger: GGGCACCCCGGCAGCAGGCCAGGCCTGGACCCCAGA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGAAATCTCGATACTCCTaGCTGCTTGCGTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGKSRYS*LLALRK
Trigger: CTTTCGCAACGCAAGCAGCCAGGAGTATCGAGATTT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCCATGTGCTGACACATaGTGGCTGGCAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGPCADT*WLAGSP
Trigger: GGGGCTCCCTGCCAGCCACCATGTGTCAGCACATGG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTTGCAGGAAGCGCTTCTaGATGGCGACAACCACCTTC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPCRKRF*MATTTF
Trigger: GAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCA...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACGAGGACTCGGGGATaGATTCCTGCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTRTRG*IPAAGS
Trigger: GCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTAGGATCTTCAGGTGGTaGATGATGCCCTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPRIFRW*MMPSWD
Trigger: GTCCCAGGAGGGCATCATCCACCACCTGAAGATCCT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCTCAGGATCTTCAGGTaGTGGATGATGCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLLRIFR*WMMPSW
Trigger: CCAGGAGGGCATCATCCACCACCTGAAGATCCTGAG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGGAAGGCGCAGTAGATaGGGCTCAGGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLGRRSR*GSGSSG
Trigger: ACCTGAAGATCCTGAGCCCCATCTACTGCGCCTTCC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGGAAGGCGCAGTAGATaGGGCTCAGGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPGRRSR*GSGSSG
Trigger: ACCTGAAGATCCTGAGCCCCATCTACTGCGCCTTCC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGCGTTCTCAATCACGTTaGTGTATGTGTTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGRSQSR*CMCWAQ
Trigger: CTGTGCCCAACACATACACCAACGTGATTGAGAACG...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGCACGATCAGAAGGGTaGCTGTTCCCGCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFARSEG*LFPPPA
Trigger: TGCTGGTGGCGGGAACAGCCACCCTTCTGATCGTGC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCCCTTCATCTGCCCCTaGGCTGTGGCTCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFPFICP*AVAPLG
Trigger: TCCTAGAGGAGCCACAGCCCAGGGGCAGATGAAGGG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCCCCAGGTCTTGACGTaGACTGCCCGGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFPQVLT*TARTDS
Trigger: TGAATCAGTCCGGGCAGTTCACGTCAAGACCTGGGG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGGTTGCAGGGCGCTGGTaGCCAAGGAATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TTLPAWRDTICILSFPLRVAGRW*PRNAEG
Trigger: GCCTTCTGCATTCCTTGGTCACCAGCGCCCTGCAAC...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR TCA 90 bp TCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGGTTGCAGGGCGCTGGTaGCCAAGGAATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SVQVRHHWWEGALDLVKQVAGRW*PRNAEG
Trigger: GCCTTCTGCATTCCTTGGTCACCAGCGCCCTGCAAC...CTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR TCA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAGGACCACGTAGTCACTaGCTGGAGGACAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQGPRSH*LEDNLP
Trigger: GGGAAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCAGGAGGGTGGCTCCATaGTGGAGTTTCCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFRRVAP*WSFPVA
Trigger: AGCTACAGGGAAACTCCATCATGGAGCCACCCTCCT...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCCCTCGCAGCTACAAGTaGAAGACCCGAGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFPRSYK*KTRGCF
Trigger: GAAACACCCTCGGGTCTTTCACTTGTAGCTGCGAGG...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCATCTTCAGGTGGTGGATaGTGCCCTCCTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GHDLGRTRDAFLASPACPSSGGG*CPPGTG
Trigger: ACCTGTCCCAGGAGGGCATCATCCACCACCTGAAGA...TGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGCCCCACTTCGATCCTaGCATCGTCACTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFAPLRS*HRHWQT
Trigger: TGTCTGCCAGTGACGATGTCAGGATCGAAGTGGGGC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGAGTCGATGTCCAAGCTaGAGGGGGAGGTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWSRCPS*RGRWMV
Trigger: AACCATCCACCTCCCCCTGCAGCTTGGACATCGACT...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGAGTCGATGTCCAAGCTaGAGGGGGAGGTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLSRCPS*RGRWMV
Trigger: AACCATCCACCTCCCCCTGCAGCTTGGACATCGACT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCTGGTGACCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPLVTKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGGTCACCAG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGATTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SASHFGTSQTPLVGRSSRFPGAE*RWWTVE
Trigger: CTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA...TCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp GGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTTTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GTSQTPLVGRSSRPREAVFPGAE*RWWTVE
Trigger: CTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA...AACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp ACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACTTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TLPAWRDTICILSFPLRYFPGAE*RWWTVE
Trigger: CTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA...GTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCCGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PHDHTSRLERHDLHSQLPRALQV*AQFPSR
Trigger: TCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCG...GGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTACAGCACTCCTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: GDVGPAPLVAGLHPVQHSWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...GGAGTGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RSAFSASHFGTSQTPLVGGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...TCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGTGGGGCTGGTGCCTTaGACAAAGGCAGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGVGLVP*TKAALV
Trigger: GACCAAGGCTGCCTTTGTGCAAGGCACCAGCCCCAC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGGGATGGATTCCTGCTaGAGGAAGCGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFGMDSC*RKRFWM
Trigger: CATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTTCGTCATGTTGCTCTaGATGAGGGTCCCACACTCG +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLFVMLL*MRVPHS
Trigger: CGAGTGTGGGACCCTCATGCAGAGCAACATGACGAA...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGTTGCTAGACGGGGTTaGCCAGCACTCCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGVARRG*PALRQD
Trigger: GTCCTGACGGAGTGCTGGGCAACCCCGTCTAGCAAC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCAGACGCGGAGTTTaGAGTGCAGGTAGACGATGG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFCRRGV*SAGRRW
Trigger: CCATCGTCTACCTGCACTGCAAACTCCGCGTCTGCA...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCAGCACCCCCAGGACTaGCCCCGTCTTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLQHPQD*PRLPQP
Trigger: GGGCTGCGGAAGACGGGGGCAGTCCTGGGGGTGCTG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGCTTGAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCCAGAGCTTAGTGGGGTaGCGTGGGATGTGGACGTGG +
Preference number: 4 (lower is better)
Translates to: SLSLTTTLPAWRDTICILQSLVG*RGMWTW
Trigger: CCACGTCCACATCCCACGGCACCCCACTAAGCTCTG...GAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp TCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: SVQVRHHWWEGALDLVKQVEAIG*RALVTQ
Trigger: TTGGGTCACCAGCGCCCTGCAACCAATGGCCTCCAC...CTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CCA 90 bp CGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RPHFPPGETRSAFSASHFCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...GAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DHTSRLERHDLHSQLPTSCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...CGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SVQVRHHWWEGALDLVKQCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...CTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGAGCAGGTGGTGGACGGTaGAGGCCATTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SASHFGTSQTPLVGRSSRAGGGR*RPLVAG
Trigger: CCCTGCAACCAATGGCCTCCACCGTCCACCACCTGC...TCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp ACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: TLPAWRDTICILSFPLRYGAECR*WTVEAI
Trigger: AATGGCCTCCACCGTCCACCACCTGCACTCAGCCCC...GTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DTICILSFPLRYKSDTTGAATLW*RRSQGL
Trigger: CAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGC...ACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVKQLSRKVLVLHTAAVEAATLW*RRSQGL
Trigger: CAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGC...CTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: LTTTLPAWRDTICILSFPPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...TGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp CTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LTTTLPAWRDTICILSFPASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...TGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp AGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: SLTTTLPAWRDTICILSFVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...GAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PPGETRSAFSASHFGTSQLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...CTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GGACATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCAGAAGTGTTTCCCGGGTaGAACGGGTGGCATGCCACA +
Preference number: 4 (lower is better)
Translates to: GHDLGRTRDAFLASPACPEVFPG*NGWHAT
Trigger: TGTGGCATGCCACCCGTTCCACCCGGGAAACACTTC...TGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGCCTCTCTGGGCTGGTaGCCCAGGTTTCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGASLGW*PRFHCQ
Trigger: CTGGCAATGAAACCTGGGCCACCAGCCCAGAGAGGC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCAGGAAGCGCTTCTaGATGGCGACAACCACCTTC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFCRKRF*MATTTF
Trigger: GAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCA...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTGCAGGAAGCGCTTCTaGATGGCGACAACCACCTTC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLCRKRF*MATTTF
Trigger: GAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCACGAGGACTCGGGGATaGATTCCTGCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFTRTRG*IPAAGS
Trigger: GCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGGTCGTTCCTCAGCGTaGTCCTCACCACGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGGRSSA*SSPRCS
Trigger: CGAACACCGTGGTGAGGACCACGCTGAGGAACGACC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGGAAGGCGCAGTAGATaGGGCTCAGGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLGRRSR*GSGSSG
Trigger: ACCTGAAGATCCTGAGCCCCATCTACTGCGCCTTCC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCGTTGGTGTATGTGTTaGGCACAGGGCAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPRWCMC*AQGSCC
Trigger: ACAACAGCTGCCCTGTGCCCAACACATACACCAACG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGGTCCCCAGGACATCTaGTGTGTGGCAGAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFGPQDI*CVAEVS
Trigger: TGAAACCTCTGCCACACACCAGATGTCCTGGGGACC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTTTAAGAACCGAGGGATaGGTGGAGGTGCAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPLRTEG*VEVQRD
Trigger: GTCTCTCTGCACCTCCACCCATCCCTCGGTTCTTAA...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTCTTAGTGGGGTGCCGTaGGATGTGGACGTGGCGCGA +
Preference number: 4 (lower is better)
Translates to: GTSQTPLVGRSSRPREAVLSGVP*DVDVAR
Trigger: TCGCGCCACGTCCACATCCCACGGCACCCCACTAAG...AACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp GACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTGTTTTCCAACCTTCGGCGTTCCCAGGGGCTaGGTGCAGGTGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: DVEDHVVTDWRTICFPTFGVPRG*VQVVDG
Trigger: ACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCC...GAAGGTTGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466434.5
ENST00000491559.5
CDS-3UTR TCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCTTGCACCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLLAPGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGGTGCAAG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGATTCCAGAGCAGGCATTaGGCTCCTCATAGAAACACT +
Preference number: 4 (lower is better)
Translates to: RCVSGLPSVPNTAPALVGFQSRH*APHRNT
Trigger: AGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAA...TCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp GCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTTCCAGAGCAGGCATTaGGCTCCTCATAGAAACACT +
Preference number: 4 (lower is better)
Translates to: AHGKPGVLHGELEPHDHTFQSRH*APHRNT
Trigger: AGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAA...AGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp CTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 4 (lower is better)
Translates to: LPAWRDTICILSFPLRYKAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...CTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTCACATGCTTTGGCCATaGTCTCAACCAGGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLHMLWP*SQPGAR
Trigger: TCTTGCACCTGGTTGAGATCATGGCCAAAGCATGTG...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGCGATTATCAGCAAGTaGAACTCCACCACGATGCTG +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLAIISK*NSTTML
Trigger: CAGCATCGTGGTGGAGTTTCACTTGCTGATAATCGC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGCGATTATCAGCAAGTaGAACTCCACCACGATGCTG +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPAIISK*NSTTML
Trigger: CAGCATCGTGGTGGAGTTTCACTTGCTGATAATCGC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GGACATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCAGGTGAGAAATGCAGCTaGCACCTCCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: GHDLGRTRDAFLASPACPGEKCS*HLLDIH
Trigger: GTGGATGTCCAGGAGGTGTCAGCTGCATTTCTCACC...TGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCATGTTGCTCTGCATaGGGGTCCCACACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGSCCSA*GSHTRS
Trigger: GGAGCGAGTGTGGGACCCTCATGCAGAGCAACATGA...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCGGACCACGTAGTCACTaGCTGGAGGACAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: HGKPGVLHGELEPHDHTSGPRSH*LEDNLF
Trigger: AAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...GGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp CACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: HFGTSQTPLVGRSSRPREVEAIG*RALVTK
Trigger: CTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCAC...TTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR GCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTTTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFFPGAE*RWWTVE
Trigger: CTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELFPGAE*RWWTVE
Trigger: CTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCCGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RPHFPPGETRSAFSASHFRALQV*AQFPSR
Trigger: TCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCG...GAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPEGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp GACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: DTICILSFPLRYKSDTTGGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...ACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp GGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GALDLVKQLSRKVLVLHTGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...AGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCTGGAACACTGTGCTTaGCAACAGGGGCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLLEHCA*QQGLEY
Trigger: ATACTCCAGCCCCTGTTGGCAAGCACAGTGTTCCAG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCATACCCGACCACATTaGTGCCCCCTCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGHTRPH*CPLFWV
Trigger: CACCCAGAAGAGGGGGCAGCAATGTGGTCGGGTATG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTAATGAGCTTCCGGGCTaGTGTCCTCACTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLNELPG*CPHFQM
Trigger: CATCTGAAAGTGAGGACAGCAGCCCGGAAGCTCATT...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTGGCCCAGGTTTCATTaGCAGGAGAGTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLWPRFH*QESHLH
Trigger: GTGAAGGTGACTCTCCTGGCAATGAAACCTGGGCCA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGTTCGTCATGTTGCTCTaGATGAGGGTCCCACACTCG +
Preference number: 4 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWFVMLL*MRVPHS
Trigger: CGAGTGTGGGACCCTCATGCAGAGCAACATGACGAA...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGCAGACGCGGAGTTTaGAGTGCAGGTAGACGATGG +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFCRRGV*SAGRRW
Trigger: CCATCGTCTACCTGCACTGCAAACTCCGCGTCTGCA...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTACCCAGGCCTGCTTCTaGATGAGGAGGCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGTQACF*MRRLTF
Trigger: GAAGGTGAGCCTCCTCATGCAGAAGCAGGCCTGGGT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTACCGGCACCCAGGCCTaGTTCTGCATGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFTGTQA*FCMRRL
Trigger: GAGCCTCCTCATGCAGAAGCAGGCCTGGGTGCCGGT...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGAAATATTCTATATTTaGCAAAGGGTGACGGACGCC +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGEIFYI*QRVTDA
Trigger: GGCGTCCGTCACCCTTTGGCAAATATAGAATATTTC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTGTCTCAGAGCTTAGTGGGGTaGCGTGGGATGTGGACGTGG +
Preference number: 4 (lower is better)
Translates to: QVRHHWWEGALDLVKQLSQSLVG*RGMWTW
Trigger: CCACGTCCACATCCCACGGCACCCCACTAAGCTCTG...AGACAACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp CGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGAGTCTGCCTGAGCAGCTaGCACAAGGAGGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RLERHDLHSQLPTSVQVRVCLSS*HKEGAG
Trigger: GCCTGCACCCTCCTTGTGGCAGCTGCTCAGGCAGAC...TCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACCTTCTGTACAGTGTaGGTCACACGGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTFCTV*VTRWLH
Trigger: ATGCAGCCACCGTGTGACCCACACTGTACAGAAGGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCACCTTCTGTACAGTGTaGGTCACACGGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFTFCTV*VTRWLH
Trigger: ATGCAGCCACCGTGTGACCCACACTGTACAGAAGGT...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGACATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCATGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: GHDLGRTRDAFLASPACPCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...TGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTGCAGGTGGTGGACGGTaGAGGCCATTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFAGGGR*RPLVAG
Trigger: CCCTGCAACCAATGGCCTCCACCGTCCACCACCTGC...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACGCAGGTGGTGGACGGTaGAGGCCATTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AWRDTICILSFPLRYKSDAGGGR*RPLVAG
Trigger: CCCTGCAACCAATGGCCTCCACCGTCCACCACCTGC...GTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp AAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KTVTGDVEDHVVTDWRTIAATLW*RRSQGL
Trigger: CAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGC...GATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp AAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KTVTGDVEDHVVTDWRTIAAATL*WRRSQG
Trigger: CCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGC...GATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: TTLPAWRDTICILSFPLRRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: RPHFPPGETRSAFSASHFVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...GAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: TLPAWRDTICILSFPLRYVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...GTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGAACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: RLERHDLHSQLPTSVQVRTGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...TCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: AWRDTICILSFPLRYKSDLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...GTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTCCAGGGAGGGCCAGTaGGCCATCTGTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLSREGQ*AICGPR
Trigger: CCTGGGGCCACAGATGGCCCACTGGCCCTCCCTGGA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCATTTCGCAGCCACGTaGGATTCAGAAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPHFAAT*DSEVFP
Trigger: GGGAAACACTTCTGAATCCCACGTGGCTGCGAAATG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGCAGCTGACACCTCCTaGACATCCACATCTGCGATT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLAADTS*TSTSAI
Trigger: AATCGCAGATGTGGATGTCCAGGAGGTGTCAGCTGC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGGAAGCGCTTCTGGATaGCGACAACCACCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFGSASG*RQPPSR
Trigger: TCGAGAAGGTGGTTGTCGCCATCCAGAAGCGCTTCC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTACGTTGCAGGAGGGGTaGCTGAGGTACAACGAGGAC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGTLQEG*LRYNED
Trigger: GTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCAGGATCTTCAGGTGGTaGATGATGCCCTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFRIFRW*MMPSWD
Trigger: GTCCCAGGAGGGCATCATCCACCACCTGAAGATCCT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTATCCTCAGCTTGAACTaGGCCTTATTGGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPILSLN*ALLELP
Trigger: CGGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGAT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCTTCGGGACAGACGGTaGCTGCTGTCTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFLRDRR*LLSSFL
Trigger: CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTAGCACCGGCCCTCGTTaGATGCTCAGCGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFSTGPR*MLSEPV
Trigger: CACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CTGTGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACATGGAACGTGGGATGTGGACGTaGCGCGAAGTTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LCPGAPEQLHTPVNPDMERGMWT*REVLSG
Trigger: TCCACTTAGAACTTCGCGCCACGTCCACATCCCACG...TTCCATGTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp GGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTAGGGCGCTGGTGACCTaGGTCTGCCTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GALDLVKQLSRKVLVLHTRALVT*VCLSSC
Trigger: GCAGCTGCTCAGGCAGACCCAGGTCACCAGCGCCCT...AGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR TCA 90 bp GAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCCTTGCTGGAGTTCCTTaGAGTCCATTTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: EMPMGNPGSCTVSLSLTTLAGVP*SPFSPV
Trigger: TACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAG...GGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp GGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCTTGCTGGAGTTCCTTaGAGTCCATTTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: GDAHGKPGVLHGELEPHDLAGVP*SPFSPV
Trigger: TACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAG...GTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp GTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTGTTTTCCAACCTTCTGTGGCGTTCCCAGGGGCTaGGTGCAGGTGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: VEDHVVTDWRTICFPTFCGVPRG*VQVVDG
Trigger: ACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCC...ACAGAAGGTTGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466434.5
ENST00000491559.5
CDS-3UTR TCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGGACCACGTAGTCACTaGCTGGAGGACAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGGPRSH*LEDNLP
Trigger: GGGAAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GAGGACAATCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTGGCTGGAGCTTGGACCACGTAGTCACTaGCTGGAGGACAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: EDNLPTPGSASVETWLELGPRSH*LEDNLP
Trigger: GGGAAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...AAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR TCA 90 bp TGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACCCTGGAAGCCGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: CFPTFCAHERDRILTLEAVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...GGCTTCCAGGGTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp GAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: EPHDHTSRLERHDLHSQLPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...AAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCCCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RPHFPPGETRSAFSASHFPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...GAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGCCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SVQVRHHWWEGALDLVKQPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...CTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TTLPAWRDTICILSFPLRPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGTCACATTGGAGACCATaGTCCTCCCAATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWSHWRP*SSQWRQ
Trigger: CTGTCTCCATTGGGAGGATCATGGTCTCCAATGTGA...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTCACATTGGAGACCATaGTCCTCCCAATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFSHWRP*SSQWRQ
Trigger: CTGTCTCCATTGGGAGGATCATGGTCTCCAATGTGA...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTGCTCAGCGAGCCTGTaGTGGACCATCCCAAATGGA +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGCSASL*WTIPNG
Trigger: TCCATTTGGGATGGTCCATCACAGGCTCGCTGAGCA...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp AGCTTGAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCGGAGGAAGGATCTCTTaGGGCTGGGAGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLSLTTTLPAWRDTICILGGRIS*GWELEN
Trigger: GTTCTCAAGCTCCCAGCCTCAAGAGATCCTTCCTCC...GAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGAGAGAGATTTGAGGTaGATGGAGGGAAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFERDLR*MEGSPE
Trigger: CTCAGGGCTTCCCTCCATGCACCTCAAATCTCTCTC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGSLGST*WSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LSFPLRYKSDTTGGKELSSLGST*WSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCT...CGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACATTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PGETRSAFSASHFGTSQTFPGAE*RWWTVE
Trigger: CTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA...TGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: HGKPGVLHGELEPHDHTSWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...GGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp GCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALDLVKQLSRKVLVLHTAGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...AGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCAATCTGGAACACTGTaGTTGCCAACAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFQSGTL*LPTGAG
Trigger: TCCAGCCCCTGTTGGCAAGCACAGTGTTCCAGATTG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCCTGGCTGCTTGCGTTaGGAAAGGATTCTGAGTACC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFPGCLR*ERILST
Trigger: GGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCCTCGATACTCCTGGCTaGTTGCGTTGCGAAAGGATT +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFLDTPG*LRCERI
Trigger: AATCCTTTCGCAACGCAAGCAGCCAGGAGTATCGAG...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGGCCCAGGTTTCATTaGCAGGAGAGTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFWPRFH*QESHLH
Trigger: GTGAAGGTGACTCTCCTGGCAATGAAACCTGGGCCA...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGAGCTGCAGGGGGAGGTaGATGGTTCAGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPESCRGR*MVQAPL
Trigger: CAGAGGGGCCTGAACCATCCACCTCCCCCTGCAGCT...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGACGGTGGAGGCCATTaGTTGCAGGGCGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: DLVKQLSRKVLVLHTAAVDGGGH*LQGAGD
Trigger: GTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTC...AACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp ACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTGTGACGGTGGAGGCCATTaGTTGCAGGGCGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TVTGDVEDHVVTDWRTICDGGGH*LQGAGD
Trigger: GTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTC...ACAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466434.5
ENST00000491559.5
CDS-3UTR CCA 90 bp GGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCAGACGGTGGAGGCCATTaGTTGCAGGGCGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GETRSAFSASHFGTSQTPDGGGH*LQGAGD
Trigger: GTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTC...TGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACAGCAGGTGGTGGACGGTaGAGGCCATTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGETRSAFSASHFGTSQTAGGGR*RPLVAG
Trigger: CCCTGCAACCAATGGCCTCCACCGTCCACCACCTGC...TGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: EKSWYSTLLRLSNFSVRLGAECR*WTVEAI
Trigger: AATGGCCTCCACCGTCCACCACCTGCACTCAGCCCC...CAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTTGTCACCCAGCAGGGTaGAGACGTCAGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFCHPAG*RRQPQA
Trigger: TGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACA...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTCCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACCCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: AWRDTICILSFPLRYKSDPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...GTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp CGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RSAFSASHFGTSQTPLVGASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...TCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp TCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SASHFGTSQTPLVGRSSRRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...TCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCCCTGCCGGTCAATCTaGAACACTGTGCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGPCRSI*NTVLAN
Trigger: GTTGGCAAGCACAGTGTTCCAGATTGACCGGCAGGG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTTCTGGGGTCCAGGCCTaGCCTGCTGCCGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLSGVQA*PAAGVP
Trigger: GGGCACCCCGGCAGCAGGCCAGGCCTGGACCCCAGA...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAACATTTCGCAGCCACGTaGGATTCAGAAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQHFAAT*DSEVFP
Trigger: GGGAAACACTTCTGAATCCCACGTGGCTGCGAAATG...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTGCCTCTCTGGGCTGGTaGCCCAGGTTTCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFASLGW*PRFHCQ
Trigger: CTGGCAATGAAACCTGGGCCACCAGCCCAGAGAGGC...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGGAAGCGCTTCTGGATaGCGACAACCACCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGGSASG*RQPPSR
Trigger: TCGAGAAGGTGGTTGTCGCCATCCAGAAGCGCTTCC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTGGTCGTTCCTCAGCGTaGTCCTCACCACGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFGRSSA*SSPRCS
Trigger: CGAACACCGTGGTGAGGACCACGCTGAGGAACGACC...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTAAATTCCCAGCGCCGTaGAGGTCCTCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGKFPAP*RSSMMV
Trigger: CACCATCATCGAGGACCTCCACGGCGCTGGGAATTT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTCTTAGTGGGGTGCCGTaGGATGTGGACGTGGCGCGA +
Preference number: 4 (lower is better)
Translates to: DTICILSFPLRYKSDTTGLSGVP*DVDVAR
Trigger: TCGCGCCACGTCCACATCCCACGGCACCCCACTAAG...ACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGCAGGCCCCAGGTCTTaGCGTGAACTGCCCGGACTG +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLAGPRS*RELPGL
Trigger: CAGTCCGGGCAGTTCACGTCAAGACCTGGGGCCTGC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CAGACGCACCAGTACGAGCCCTCCAGGTTTGCGCACAGTTCCCTTCCAGAGCAGCATAGAAACACTCATTaGCATCTTGCACCTGGACGC +
Preference number: 4 (lower is better)
Translates to: QTHQYEPSRFAHSSLPEQHRNTH*HLAPGR
Trigger: GCGTCCAGGTGCAAGATGTCAATGAGTGTTTCTATG...CTGCTCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGTACTGGTGCGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR TCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCGGACCACGTAGTCACTaGCTGGAGGACAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVGPRSH*LEDNLP
Trigger: GGGAAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400421.6
ENST00000468982.5
CDS-3UTR TCA 90 bp AAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: KTVTGDVEDHVVTDWRTIVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...GATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCACCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PAWRDTICILSFPLRYKSPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...TGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp GACTGGAGGACAATCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTGGCTGGGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DWRTIFPLQVQLPWRRGWELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...CCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTGTCCTCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR TCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCACATGCTTTGGCCATaGTCTCAACCAGGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFHMLWP*SQPGAR
Trigger: TCTTGCACCTGGTTGAGATCATGGCCAAAGCATGTG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGTTGCGAAAGGATTCTaGGTACCTGACATTTTTGAT +
Preference number: 4 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCVAKGF*VPDIFD
Trigger: ATCAAAAATGTCAGGTACTCAGAATCCTTTCGCAAC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGCGATTATCAGCAAGTaGAACTCCACCACGATGCTG +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFAIISK*NSTTML
Trigger: CAGCATCGTGGTGGAGTTTCACTTGCTGATAATCGC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTGCAGGAGGGGTGGCTaGGGTACAACGAGGACTCGG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLCRRGG*GTTRTR
Trigger: CCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTATATTTGCCAAAGGGTaGCGGACGCCAAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFIFAKG*RTPREG
Trigger: GCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATAT...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCAGAACAGCGGGACATaGCTTGGGAAGAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGQNSGT*LGKNQR
Trigger: TCTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp CAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACGGACCACGTAGTCACTaGCTGGAGGACAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: QLPTSVQVRHHWWEGALDGPRSH*LEDNLA
Trigger: TGCAAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...GTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR GCA 90 bp CTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LPAWRDTICILSFPLRYKSLGST*WSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCT...CTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp GGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GTSQTPLVGRSSRPREAVSLGST*WSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCT...AACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGCTGGTGACCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSFPLRYKSDTTGGKELSLVTKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGGTCACCAG...CGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGGCCTGCTGCCGGGGTaGCCTGAGGGTACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRGLLPG*PEGTQD
Trigger: GTCCTGGGTACCCTCAGGGCACCCCGGCAGCAGGCC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCCAGGCCTGGCCTGCTaGCGGGGTGCCCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLPGLAC*RGALRV
Trigger: TACCCTCAGGGCACCCCGGCAGCAGGCCAGGCCTGG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTCATACCCGACCACATTaGTGCCCCCTCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFHTRPH*CPLFWV
Trigger: CACCCAGAAGAGGGGGCAGCAATGTGGTCGGGTATG...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTGGCCCAGGTTTCATTaGCAGGAGAGTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGWPRFH*QESHLH
Trigger: GTGAAGGTGACTCTCCTGGCAATGAAACCTGGGCCA...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTTGCTGGTGACCTGGGTCTaGCTGAGCAGCTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: TVTGDVEDHVVTDWRTILLVTWV*LSSCHK
Trigger: CTTGTGGCAGCTGCTCAGGCAGACCCAGGTCACCAG...CAAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCTGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CCTGGAAGCCACAGAGCAGGAATCTATAGACAGTTCTCTGCAGAGCTTAGTGGGTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PGSHRAGIYRQFSAELSGCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...CCCACTAAGCTCTGCAGAGAACTGTCTATAGATTCCTGCTCTGTGGCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp ACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTTGTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TVTGDVEDHVVTDWRTILCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...CAAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CCA 90 bp AAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCGCAGGTGGTGGACGGTaGAGGCCATTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KTVTGDVEDHVVTDWRTIAGGGR*RPLVAG
Trigger: CCCTGCAACCAATGGCCTCCACCGTCCACCACCTGC...GATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: EKSWYSTLLRLSNFSVRLAECRW*TVEAIG
Trigger: ACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC...CAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAAGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CVMLFQERQVKAPQLTSEAATLW*RRSQGL
Trigger: CAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGC...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp AGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGTCACCCAGCAGGGTaGAGACGTCAGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: RHDLHSQLPTSVQVRHHWCHPAG*RRQPQA
Trigger: TGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACA...CCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACCCTGGAAGCCTGTCACCCAGCAGGGTaGAGACGTCAGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: CFPTFCAHERDRILTLEACHPAG*RRQPQA
Trigger: TGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACA...GGCTTCCAGGGTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466434.5
ENST00000491559.5
CDS-3UTR CCA 90 bp GACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTTGTCACCCAGCAGGGTaGAGACGTCAGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: DLVKQLSRKVLVLHTAAVCHPAG*RRQPQA
Trigger: TGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACA...AACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACCCTGGAAGCCCCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: CFPTFCAHERDRILTLEAPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...GGCTTCCAGGGTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp AGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RHDLHSQLPTSVQVRHHWASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...CCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCACGTAGTCACTGACTaGAGGACAATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFHVVTD*RTIFPL
Trigger: GAGTGGGAAGATTGTCCTCCAGTCAGTGACTACGTG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ASRPHFPPGETRSAFSASCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...GGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: LVKQLSRKVLVLHTAAVEVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...CTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLTGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGATACTTGAAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GYLKTVTGDVEDHVVTDWTGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...CCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTTCAAGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTGAAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACACTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LKTVTGDVEDHVVTDWRTLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...TGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGGGTGGCGTCCCTGGTaGTACGGCACTGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLGWRPW*YGTGRC
Trigger: ACACCTGCCAGTGCCGTACCACCAGGGACGCCACCC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCCCGGGTGGAACGGGTaGCATGCCACAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLPGWNG*HATGSG
Trigger: GCCACTTCCTGTGGCATGCCACCCGTTCCACCCGGG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCATTTCGCAGCCACGTaGGATTCAGAAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFHFAAT*DSEVFP
Trigger: GGGAAACACTTCTGAATCCCACGTGGCTGCGAAATG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCTTTCAGATGAGCTCTaGCACCTTCTTTCCCACATG +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLLSDEL*HLLSHM
Trigger: CATGTGGGAAAGAAGGTGCCAGAGCTCATCTGAAAG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGGAGGCCTCTCTGGGCTaGTGGCCCAGGTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPEEASLG*WPRFHC
Trigger: GCAATGAAACCTGGGCCACCAGCCCAGAGAGGCCTC...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGGTGCAGAGAGACACTaGGGATCCCGGGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLGAERH*GSRGSP
Trigger: TGGGCTCCCCCGGGATCCCCAGTGTCTCTCTGCACC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGGCGCGAAGTTCTAAGTaGATCTCAAGGCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: LSFPLRYKSDTTGGKELSARSSK*ISRPRA
Trigger: AGCACGTGGCCTTGAGATCCACTTAGAACTTCGCGC...CGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp TCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCCGTGGGATGTGGACGTaGCGCGAAGTTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SQLPTSVQVRHHWWEGALRGMWT*REVLSG
Trigger: TCCACTTAGAACTTCGCGCCACGTCCACATCCCACG...GAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp ACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTGTTTTCCACTTAGTGGGGTGCCGTaGGATGTGGACGTGGCGCGA +
Preference number: 4 (lower is better)
Translates to: TGDVEDHVVTDWRTICFPLSGVP*DVDVAR
Trigger: TCGCGCCACGTCCACATCCCACGGCACCCCACTAAG...TGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp ACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTTTTCACCAGTATGGTaGCGTTGTACCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TTLPAWRDTICILSFPLRFSPVW*RCTRSP
Trigger: TGGGCTCCTGGTACAACGTCACCATACTGGTGAAAA...CCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCTTGCTGGAGTTCCTTaGAGTCCATTTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLLAGVP*SPFSPV
Trigger: TACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGCCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: HDLHSQLPTSVQVRHHWWPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...CCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCACATTGGAGACCATaGTCCTCCCAATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGSHWRP*SSQWRQ
Trigger: CTGTCTCCATTGGGAGGATCATGGTCTCCAATGTGA...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGTCATGTTGCTCTGCATaGGGGTCCCACACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPESCCSA*GSHTRS
Trigger: GGAGCGAGTGTGGGACCCTCATGCAGAGCAACATGA...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGAAAAGATCCTCAGCTTaGACTGGGCCTTATTGGAGT +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLKRSSA*TGPYWS
Trigger: ACTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGCTTGAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCGAACGTACTTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSLTTTLPAWRDTICILERTWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAAGTACGTTC...GAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR TCA 90 bp CGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGAGGAGGAAGGATCTCTTaGGGCTGGGAGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RLERHDLHSQLPTSVQVRGGRIS*GWELEN
Trigger: GTTCTCAAGCTCCCAGCCTCAAGAGATCCTTCCTCC...TCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp ACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCTGGTGACCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TTTLPAWRDTICILSFPLLVTKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGGTCACCAG...AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR GCA 90 bp TGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: CLEKSWYSTLLRLSNFSVVEAIG*RALVTK
Trigger: CTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCAC...GACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR GCA 90 bp ACTGACTGGAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: TDWRTICFPTFCAHERDRVEAIG*RALVTK
Trigger: CTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCAC...CCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTCCAGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466434.5
ENST00000491559.5
CDS-3UTR GCA 90 bp CCTGGAAGCCACAGAGCAGGAATCTATAGACAGTTCTCTGCAGAGCTTAGTGGGCGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PGSHRAGIYRQFSAELSGRALQV*AQFPSR
Trigger: TCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCG...CCCACTAAGCTCTGCAGAGAACTGTCTATAGATTCCTGCTCTGTGGCTTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp CTGTGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACATGGAATGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LCPGAPEQLHTPVNPDMEWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...TTCCATGTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGACCCGACCACATTGCTaGCCCCTCTTCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLTRPHC*PLFWVR
Trigger: CCTCACCCAGAAGAGGGGGCAGCAATGTGGTCGGGT...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGAGTTCGCGTGGCTGGTaGTCCGCTGGCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLSSRGW*SAGWGS
Trigger: TGAACCCCAGCCAGCGGAGCACCAGCCACGCGAACT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGTGGGGCTGGTGCCTTaGACAAAGGCAGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLVGLVP*TKAALV
Trigger: GACCAAGGCTGCCTTTGTGCAAGGCACCAGCCCCAC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGACAGAGCACCCTGACTaGTCCGGTCAGGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLTEHPD*SGQVQP
Trigger: CGGCTGAACCTGACCGGAGCAGTCAGGGTGCTCTGT...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGGGCCTTATTGGAGTTaGCGTTCTCAATCACGTTGG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGGPYWS*RSQSRW
Trigger: CCAACGTGATTGAGAACGGCAACTCCAATAAGGCCC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGGGGACAGACGGTGGCTaGTGTCTTCCTTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPEGTDGG*CLPFWA
Trigger: AGCCCAGAAAGGAAGACAGCAGCCACCGTCTGTCCC...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGCAATGGGTTCCAACCTaGCCGGGAGGTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: PPGETRSAFSASHFGTSQQWVPT*PGGSRI
Trigger: AATTCTGGAACCTCCCGGGCAGGTTGGAACCCATTG...CTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR GCA 90 bp CAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACACTGGAGGACAATCTTaGACCTGGACGCTGATCACT +
Preference number: 4 (lower is better)
Translates to: QLPTSVQVRHHWWEGALDTGGQS*TWTLIT
Trigger: AGTGATCAGCGTCCAGGTGCAAGATTGTCCTCCAGT...GTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTAGAAGCCATGGAGATTaGAGTGATCCATCTACAATG +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPRSHGD*SDPSTM
Trigger: CATTGTAGATGGATCACTCCAATCTCCATGGCTTCT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGTCCCTCTCTGGAGCTTaGGGTGCAGGGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLSLSGA*GAGAMQ
Trigger: CTGCATGGCCCCTGCACCCCAAGCTCCAGAGAGGGA...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTTCCCACTCCAGGTTCAGTGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: VEDHVVTDWRTIFPLQVQCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...CTGAACCTGGAGTGGGAAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CCA 90 bp AGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGACGGTGGAGGCCATTaGTTGCAGGGCGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SCLEKSWYSTLLRLSNFSDGGGH*LQGAGD
Trigger: GTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTC...GGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGCAGGTGGTGGACGGTaGAGGCCATTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLAGGGR*RPLVAG
Trigger: CCCTGCAACCAATGGCCTCCACCGTCCACCACCTGC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTGTTTTCCAACCTTCGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: DVEDHVVTDWRTICFPTFAECRW*TVEAIG
Trigger: ACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC...GAAGGTTGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466434.5
ENST00000491559.5
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLAAATL*WRRSQG
Trigger: CCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GALDLVKQLSRKVLVLHTQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...AGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp ACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTGTCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TVTGDVEDHVVTDWRTICQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...ACAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp GACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGCACGTAGTCACTGACTaGAGGACAATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: DHTSRLERHDLHSQLPTSHVVTD*RTIFPL
Trigger: GAGTGGGAAGATTGTCCTCCAGTCAGTGACTACGTG...CGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400421.6
ENST00000468982.5
CDS-3UTR CCA 90 bp GAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: EKSWYSTLLRLSNFSVRLRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...CAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SLTTTLPAWRDTICILSFCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...GAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: LERHDLHSQLPTSVQVRHVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...GTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACAGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: PGETRSAFSASHFGTSQTVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...TGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CAGGATTCTCACCCTGGAAGCCACAGAGCAGGAATCTATAGACAGTTCTCTGCAGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: QDSHPGSHRAGIYRQFSAVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...TGCAGAGAACTGTCTATAGATTCCTGCTCTGTGGCTTCCAGGGTGAGAATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp TGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: WYSTLLRLSNFSVRLWFTVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...TGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp AGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: SCLEKSWYSTLLRLSNFSTGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...GGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGAGGGGGTGGCGTCCCTaGTGGTACGGCACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRRGWRP*WYGTGR
Trigger: CCTGCCAGTGCCGTACCACCAGGGACGCCACCCCCT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTGGAAGCGCTTCTGGATaGCGACAACCACCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFGSASG*RQPPSR
Trigger: TCGAGAAGGTGGTTGTCGCCATCCAGAAGCGCTTCC...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGGTCGTTCCTCAGCGTaGTCCTCACCACGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLGRSSA*SSPRCS
Trigger: CGAACACCGTGGTGAGGACCACGCTGAGGAACGACC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCCCTTCATCTGCCCCTaGGCTGTGGCTCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLPFICP*AVAPLG
Trigger: TCCTAGAGGAGCCACAGCCCAGGGGCAGATGAAGGG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGATAAAAGCAATACCTTaGTACACAGGAGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGIKAIP*YTGEKS
Trigger: TGACTTTTCTCCTGTGTACCAAGGTATTGCTTTTAT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGCCGCTGGCCTGGCTTaGGCCCACAGCACTGACCAG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLAAGLA*AHSTDQ
Trigger: CTGGTCAGTGCTGTGGGCCCAAGCCAGGCCAGCGGC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408989.6
CDS-3UTR CCA 90 bp GACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGCACGTAGTCACTGACTaGAGGACAATCTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: DHTSRLERHDLHSQLPTSHVVTD*RTILHL
Trigger: CAGGTGCAAGATTGTCCTCCAGTCAGTGACTACGTG...CGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR TCA 90 bp GACTGGAGGACAATCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTGGCTGGCTTGCTGGAGTTCCTTaGAGTCCATTTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: DWRTIFPLQVQLPWRRGWLAGVP*SPFSPV
Trigger: TACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAG...CCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTGTCCTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR TCA 90 bp AGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTTGCAGGGCGCTGGTaGCCAAGGAATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SCLEKSWYSTLLRLSNFSVAGRW*PRNAEG
Trigger: GCCTTCTGCATTCCTTGGTCACCAGCGCCCTGCAAC...GGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR TCA 90 bp TCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGCATAGAAACACTCATTaGCATCTTGCACCTGGACGC +
Preference number: 4 (lower is better)
Translates to: SVQVRHHWWEGALDLVKQHRNTH*HLAPGR
Trigger: GCGTCCAGGTGCAAGATGTCAATGAGTGTTTCTATG...CTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
CDS-3UTR TCA 90 bp AGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGCTGGAGCTTCCTGGTaGCAGACGCACCAGTACGAG +
Preference number: 4 (lower is better)
Translates to: SCLEKSWYSTLLRLSNFSAGASW*QTHQYE
Trigger: CTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGC...GGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp GGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GETRSAFSASHFGTSQTPPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...TGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PGETRSAFSASHFGTSQTPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...TGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGACTGGGTGACAAGGTaGAGTTCTCTAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLDWVTR*SSLGRG
Trigger: CCCTCGGCCTAGAGAACTTCACCTTGTCACCCAGTC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTCTCACAGAGCACCCTaGCTGCTCCGGTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLSHRAP*LLRSGS
Trigger: TGAACCTGACCGGAGCAGTCAGGGTGCTCTGTGAGA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTCTTCAGGTGGTGGATaGTGCCCTCCTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLSSGGG*CPPGTG
Trigger: ACCTGTCCCAGGAGGGCATCATCCACCACCTGAAGA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCAGAACACCTGGTAGCTaGAGTTGTTGGACTGGATTT +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFRTPGS*SCWTGF
Trigger: AAATCCAGTCCAACAACTTCAGCTACCAGGTGTTCT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGCGATTGATTCTACTTaGTCAGAATCTGTGATCCAC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFAIDST*SESVIH
Trigger: GTGGATCACAGATTCTGATCAAGTAGAATCAATCGC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGAGAGGCCTTTTTCTGTaGAGCCGCTGGCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLRGLFL*SRWPGL
Trigger: CAAGCCAGGCCAGCGGCTTCACAGAAAAAGGCCTCT...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408989.6
CDS-3UTR GCA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACTCTGGAGCTTGGGGTaGAGGGGCCATGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: CVMLFQERQVKAPQLTSELWSLG*RGHAVA
Trigger: CGCTACTGCATGGCCCCTGCACCCCAAGCTCCAGAG...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp GGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCAAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GETRSAFSASHFGTSQTPSLGST*WSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCT...TGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCCTGGTGACCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELLVTKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGGTCACCAG...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLRALQV*AQFPSR
Trigger: TCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGACCCGACCACATTGCTaGCCCCTCTTCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLTRPHC*PLFWVR
Trigger: CCTCACCCAGAAGAGGGGGCAGCAATGTGGTCGGGT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCTCCGGGGGATTCCATaGAGACGCGGAGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLLRGIP*RRGVCS
Trigger: ACTGCAAACTCCGCGTCTGCATGGAATCCCCCGGAG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAGAAATATTCTATATTTaGCAAAGGGTGACGGACGCC +
Preference number: 4 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQEIFYI*QRVTDA
Trigger: GGCGTCCGTCACCCTTTGGCAAATATAGAATATTTC...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTACCTTCTGTACAGTGTaGGTCACACGGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFTFCTV*VTRWLH
Trigger: ATGCAGCCACCGTGTGACCCACACTGTACAGAAGGT...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAATCCCTCTCTGGAGCTTaGGGTGCAGGGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: CVMLFQERQVKAPQLTSESLSGA*GAGAMQ
Trigger: CTGCATGGCCCCTGCACCCCAAGCTCCAGAGAGGGA...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LEKSWYSTLLRLSNFSVRCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTTGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: DTICILSFPLRYKSDTTGCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...ACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp AGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: SCLEKSWYSTLLRLSNFSAECRW*TVEAIG
Trigger: ACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC...GGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AGAGCAGGCATTGAGCTCCTCATAGAAACACTCATTGACATCTTGCACCTGGACGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RAGIELLIETLIDILHLDASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...GTCCAGGTGCAAGATGTCAATGAGTGTTTCTATGAGGAGCTCAATGCCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CCA 90 bp TGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CLEKSWYSTLLRLSNFSVQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...GACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp GCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCCACGTAGTCACTGACTaGAGGACAATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: AFSASHFGTSQTPLVGRSHVVTD*RTIFPL
Trigger: GAGTGGGAAGATTGTCCTCCAGTCAGTGACTACGTG...GCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400421.6
ENST00000468982.5
CDS-3UTR CCA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGATGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SASHFGTSQTPLVGRSSRCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...TCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: CLEKSWYSTLLRLSNFSVVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...GACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGGGTGGCGTCCCTGGTaGTACGGCACTGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRGWRPW*YGTGRC
Trigger: ACACCTGCCAGTGCCGTACCACCAGGGACGCCACCC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGTCCCGTGCCAAGACCTaGGACCGTTACCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQSRAKT*DRYPCC
Trigger: GCAACAGGGGTAACGGTCCCAGGTCTTGGCACGGGA...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCTTTCAGATGAGCTCTaGCACCTTCTTTCCCACATG +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGLSDEL*HLLSHM
Trigger: CATGTGGGAAAGAAGGTGCCAGAGCTCATCTGAAAG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTGTGTGCCATTGCTGTaGCTCACGTTGCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLCVPLL*LTLQEG
Trigger: CCCCTCCTGCAACGTGAGCCACAGCAATGGCACACA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCATAAAAGCAATACCTTaGTACACAGGAGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCIKAIP*YTGEKS
Trigger: TGACTTTTCTCCTGTGTACCAAGGTATTGCTTTTAT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGAGCGCGAAGTTCTAAGTaGATCTCAAGGCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: RLERHDLHSQLPTSVQVRARSSK*ISRPRA
Trigger: AGCACGTGGCCTTGAGATCCACTTAGAACTTCGCGC...TCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp CGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGATTTTCACCAGTATGGTaGCGTTGTACCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RSAFSASHFGTSQTPLVGFSPVW*RCTRSP
Trigger: TGGGCTCCTGGTACAACGTCACCATACTGGTGAAAA...TCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCTTGCTGGAGTTCCTTaGAGTCCATTTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGLAGVP*SPFSPV
Trigger: TACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAGGCGTTCCCAGGGGCTaGGTGCAGGTGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: RLSNFSVRLWFTIFIVTSGVPRG*VQVVDG
Trigger: ACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCC...TGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGCTTGCACCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 4 (lower is better)
Translates to: LEKSWYSTLLRLSNFSVRLAPGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGGTGCAAG...CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000497243.5
CDS-3UTR TCA 90 bp GACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTCTTGCACCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 4 (lower is better)
Translates to: DLVKQLSRKVLVLHTAAVLAPGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGGTGCAAG...AACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000497243.5
CDS-3UTR TCA 90 bp GTGACTTCAAATACCTGGGCATACGACGAGGCCCTTACTCAGGCCCCCAACATCTTCCAGAGCAGGCATTaGGCTCCTCATAGAAACACT +
Preference number: 4 (lower is better)
Translates to: VTSNTWAYDEALTQAPNIFQSRH*APHRNT
Trigger: AGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAA...GATGTTGGGGGCCTGAGTAAGGGCCTCGTCGTATGCCCAGGTATTTGAAGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR TCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCTTCCAGAGCAGGCATTaGGCTCCTCATAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVFQSRH*APHRNT
Trigger: AGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAA...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KTVTGDVEDHVVTDWRTIPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...GATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCCAGCGTCCATGTGCTaGCACATGGTGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLPASMC*HMVAGR
Trigger: CCTGCCAGCCACCATGTGTCAGCACATGGACGCTGG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGGTGAGAAATGCAGCTaGCACCTCCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLGEKCS*HLLDIH
Trigger: GTGGATGTCCAGGAGGTGTCAGCTGCATTTCTCACC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTACCTCCGTTAAGGCTTaGAGAGTTAAGAACCGAGGG +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFTSVKA*RVKNRG
Trigger: CCCTCGGTTCTTAACTCTTCAAGCCTTAACGGAGGT...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp GTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTGTTTTCCAACCTTCTGTTTGAGGCTGGGAGCTTaGGAACAGCCTGGGCTACTC +
Preference number: 4 (lower is better)
Translates to: VEDHVVTDWRTICFPTFCLRLGA*EQPGLL
Trigger: GAGTAGCCCAGGCTGTTCTCAAGCTCCCAGCCTCAA...ACAGAAGGTTGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCTCTGGAGCTTGGGGTaGAGGGGCCATGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLLWSLG*RGHAVA
Trigger: CGCTACTGCATGGCCCCTGCACCCCAAGCTCCAGAG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGTTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRFPGAE*RWWTVE
Trigger: CTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTGGGCCAGCGTGGAGATaGCCATGGGAAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LRLSNFSVRLWFTIFIVTGPAWR*PWETRG
Trigger: ACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCC...AGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACCAGGCCTGGCCTGCTaGCGGGGTGCCCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVPGLAC*RGALRV
Trigger: TACCCTCAGGGCACCCCGGCAGCAGGCCAGGCCTGG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGAGTTCGCGTGGCTGGTaGTCCGCTGGCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRSSRGW*SAGWGS
Trigger: TGAACCCCAGCCAGCGGAGCACCAGCCACGCGAACT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGACCCAGGCCTGCTTCTaGATGAGGAGGCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQTQACF*MRRLTF
Trigger: GAAGGTGAGCCTCCTCATGCAGAAGCAGGCCTGGGT...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGTCACATTAATCGAGTaGCTTTTGAGTCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGVTLIE*LLSRCR
Trigger: ACGACAGCGACTCAAAAGGCACTCGATTAATGTGAC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACTGAATATGTGTCATaGTCTTCCAAGAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTEYVS*SSKKGK
Trigger: CTTGCCTTTCTTGGAAGAGCATGACACATATTCAGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGTCCCTCTCTGGAGCTTaGGGTGCAGGGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRSLSGA*GAGAMQ
Trigger: CTGCATGGCCCCTGCACCCCAAGCTCCAGAGAGGGA...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLGAECR*WTVEAI
Trigger: AATGGCCTCCACCGTCCACCACCTGCACTCAGCCCC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACCCTGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: DNLFSNLLCSRKGQDSHPVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...AGGGTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp CTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACCCTGGAAGCACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: LFSNLLCSRKGQDSHPGSTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...GCTTCCAGGGTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGCTTGCCAACAGGGGCTaGAGTATGGGGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRLANRG*SMGASV
Trigger: CACGCTGGCCCCCATACTCCAGCCCCTGTTGGCAAG...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGACCCGGGGCAGTGCTaGGCACCTCCTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVDPGQC*APPAPR
Trigger: GCGTGGAGCAGGAGGTGCCCAGCACTGCCCCGGGTC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGGTGAGAGGCCTCTCTaGGCTGGTGGCCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRGERPL*AGGPGF
Trigger: GAAACCTGGGCCACCAGCCCAGAGAGGCCTCTCACC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGTGGATGATGCCCTCCTaGGACAGGTCGTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQWMMPS*DRSFLS
Trigger: GCTGAGGAACGACCTGTCCCAGGAGGGCATCATCCA...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGTGGATGATGCCCTCCTaGGACAGGTCGTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLWMMPS*DRSFLS
Trigger: GCTGAGGAACGACCTGTCCCAGGAGGGCATCATCCA...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAGTGACTTCAAATACCTaGGCATACGACGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RSAFSASHFGTSQTPLVGVTSNT*AYDEAL
Trigger: AAGGGCCTCGTCGTATGCCCAGGTATTTGAAGTCAC...TCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR CCA 90 bp CACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAGCTAGTTTCTTACTaGCCAATTGGGCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: HDLHSQLPTSVQVRHHWWELVSY*PIGQSP
Trigger: AGGGGACTGCCCAATTGGCCAGTAAGAAACTAGCTC...CCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR TCA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAAGTGAACTGCCCGGACTaGTTCAGGGGCAAGACACAG +
Preference number: 4 (lower is better)
Translates to: CVMLFQERQVKAPQLTSEVNCPD*FRGKTQ
Trigger: CTGTGTCTTGCCCCTGAATCAGTCCGGGCAGTTCAC...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp GAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGTTTTCACCAGTATGGTaGCGTTGTACCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ETRSAFSASHFGTSQTPLFSPVW*RCTRSP
Trigger: TGGGCTCCTGGTACAACGTCACCATACTGGTGAAAA...CAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTTTTCACCAGTATGGTaGCGTTGTACCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LVKQLSRKVLVLHTAAVEFSPVW*RCTRSP
Trigger: TGGGCTCCTGGTACAACGTCACCATACTGGTGAAAA...CTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp ACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACCTTGCTGGAGTTCCTTaGAGTCCATTTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: TLPAWRDTICILSFPLRYLAGVP*SPFSPV
Trigger: TACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAG...GTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGTTGCAGGGCGCTGGTaGCCAAGGAATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLVAGRW*PRNAEG
Trigger: GCCTTCTGCATTCCTTGGTCACCAGCGCCCTGCAAC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LERHDLHSQLPTSVQVRHELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...GTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp AGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: RHDLHSQLPTSVQVRHHWELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...CCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp CTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LVKQLSRKVLVLHTAAVEELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...CTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGGTGAGAAATGCAGCTaGCACCTCCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLGEKCS*HLLDIH
Trigger: GTGGATGTCCAGGAGGTGTCAGCTGCATTTCTCACC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ATGGAGCATCCAGCACAACCAGCCACATTTCAGTGTCTTATGCGATTGATTCTAGTTCTGGAGGCAGCTTaGCTCACGGCGACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MEHPAQPATFQCLMRLILVLEAA*LTATFL
Trigger: CAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAAC...TAGAATCAATCGCATAAGACACTGAAATGTGGCTGGTTGTGCTGGATGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGTTCTGGAGGCAGCTTaGCTCACGGCGACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLVLEAA*LTATFL
Trigger: CAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAAC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGGACCACGTAGTCACTaGCTGGAGGACAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: ETRSAFSASHFGTSQTPLGPRSH*LEDNLF
Trigger: AAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...CAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCTGGTGACCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLLVTKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGGTCACCAG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ATGGAGCATCCAGCACAACCAGCCACATTTCAGTGTCTTATGCGATTGATTCTAGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: MEHPAQPATFQCLMRLILVEAIG*RALVTK
Trigger: CTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCAC...TAGAATCAATCGCATAAGACACTGAAATGTGGCTGGTTGTGCTGGATGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCAATCTGGAACACTGTaGTTGCCAACAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLQSGTL*LPTGAG
Trigger: TCCAGCCCCTGTTGGCAAGCACAGTGTTCCAGATTG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGACCCGACCACATTGCTaGCCCCTCTTCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRTRPHC*PLFWVR
Trigger: CCTCACCCAGAAGAGGGGGCAGCAATGTGGTCGGGT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCTTTTCCAACCTTCTGTaGTCACGAAAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVFSNLL*SRKGQD
Trigger: ATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAA...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp ACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGTTAACAAGCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TSVQVRHHWWEGALDLVKLTSKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGCTTGTTAA...CTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR GCA 90 bp GGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTTCACCTACCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GALDLVKQLSRKVLVLHTSPTKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGGTAGGTGA...AGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGAGTCAGTCACGTTCCTaGACTCGGGGACCTCCACTA +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLSQSRS*TRGPPL
Trigger: TAGTGGAGGTCCCCGAGTCCAGGAACGTGACTGACT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGTGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRCRRRM*FRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCA...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLAECRW*TVEAIG
Trigger: ACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AATCTTTATTGTGACTTCAAATACCTGGGCATACGACGAGGCCCTTACTCAGGCCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: NLYCDFKYLGIRRGPYSGQVQLP*RRGWSF
Trigger: GAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTG...GCCTGAGTAAGGGCCTCGTCGTATGCCCAGGTATTTGAAGTCACAATAAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR CCA 90 bp TCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: SVQVRHHWWEGALDLVKQVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...CTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: LSFPLRYKSDTTGGKELSVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...CGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp AGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RHDLHSQLPTSVQVRHHWCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...CCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: WYSTLLRLSNFSVRLWFTTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...TGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp ACTGACTGGAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: TDWRTICFPTFCAHERDRTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...CCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTCCAGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp TTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATACGACGAGGCCACAGGGGCTGGAGTATaGGGGCCAGCGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LWFTIFIVTSNTWAYDEATGAGV*GPAWRC
Trigger: GCATCTCCACGCTGGCCCCCATACTCCAGCCCCTGT...GGCCTCGTCGTATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR CCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGAGCAGAGGCACGGTCTaGAAGGCGGTGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQSRGTV*KAVRNA
Trigger: TGCATTTCTCACCGCCTTCCAGACCGTGCCTCTGCT...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCTTCGGGACAGACGGTaGCTGCTGTCTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLLRDRR*LLSSFL
Trigger: CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCCAGAGATGCGTTTCTaGCCTCCCCAGCGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLPEMRF*PPQRAQ
Trigger: TTGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TTGAAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAGCGCGAAGTTCTAAGTaGATCTCAAGGCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: LKTVTGDVEDHVVTDWRTARSSK*ISRPRA
Trigger: AGCACGTGGCCTTGAGATCCACTTAGAACTTCGCGC...TGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp TCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCCACGTAGTCACTGACTaGAGGACAATCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SRLERHDLHSQLPTSVQVHVVTD*RTICFP
Trigger: TGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTG...GACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGAAGGAGAGAGAGATTTaGGGTGCATGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLKEREI*GAWREA
Trigger: GGCTTCCCTCCATGCACCTCAAATCTCTCTCTCCTT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR TCA 90 bp GGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACCCTTTTCACCAGTATGGTaGCGTTGTACCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQSVFQPSVLTKGTGFSPFSPVW*RCTRSP
Trigger: TGGGCTCCTGGTACAACGTCACCATACTGGTGAAAA...GGGTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCTTGCACCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLLAPGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGGTGCAAG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACCTTGCACCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 4 (lower is better)
Translates to: EDNLFSNLLCSRKGQDSHLAPGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGGTGCAAG...GTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466434.5
CDS-3UTR TCA 90 bp GACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTCATAGAAACACTCATTaGCATCTTGCACCTGGACGC +
Preference number: 4 (lower is better)
Translates to: DTICILSFPLRYKSDTTGHRNTH*HLAPGR
Trigger: GCGTCCAGGTGCAAGATGTCAATGAGTGTTTCTATG...ACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
CDS-3UTR TCA 90 bp GAAGGAGCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACTTCCAGAGCAGGCATTaGGCTCCTCATAGAAACACT +
Preference number: 4 (lower is better)
Translates to: EGALDLVKQLSRKVLVLHFQSRH*APHRNT
Trigger: AGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAA...GTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAAAGGAGGGTGGCTCCATaGTGGAGTTTCCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: CVMLFQERQVKAPQLTSERRVAP*WSFPVA
Trigger: AGCTACAGGGAAACTCCATCATGGAGCCACCCTCCT...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGGGTCTTCAGAGCTGTaGGGGTGGAGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLGSSEL*GWRSMA
Trigger: TGCCATTGACCTCCACCCTCACAGCTCTGAAGACCC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGTCCTCACTTTCAGATaGGCTCTGGCACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLVLTFR*ALAPSF
Trigger: GAAAGAAGGTGCCAGAGCTCATCTGAAAGTGAGGAC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ATGGAGCATCCAGCACAACCAGCCACATTTCAGTGTCTTATGCGATTGATTCTAAGGCCTGCTTCTGCATaGGGAGGCTCACCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: MEHPAQPATFQCLMRLILRPASA*GGSPSD
Trigger: GTCTGAAGGTGAGCCTCCTCATGCAGAAGCAGGCCT...TAGAATCAATCGCATAAGACACTGAAATGTGGCTGGTTGTGCTGGATGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp TTGAAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAGGACCACGTAGTCACTaGCTGGAGGACAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: LKTVTGDVEDHVVTDWRTGPRSH*LEDNLF
Trigger: AAACAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...TGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp CCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACATGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: PGETRSAFSASHFGTSQTWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...TGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp CGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAGGAAACCCGGGGTCCTaGACGGTGAGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RLSNFSVRLWFTIFIVTSGNPGS*TVSLSL
Trigger: GAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCC...TGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCTGGAACACTGTGCTTaGCAACAGGGGCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLLEHCA*QQGLEY
Trigger: ATACTCCAGCCCCTGTTGGCAAGCACAGTGTTCCAG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTTGCACGCGTGTCCCCTaGCGGTCAATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLCTRVP*RSIWNT
Trigger: AGTGTTCCAGATTGACCGGCAGGGGACACGCGTGCA...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGTGCACGCGTGTCCCCTaGCGGTCAATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRCTRVP*RSIWNT
Trigger: AGTGTTCCAGATTGACCGGCAGGGGACACGCGTGCA...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCATACCCGACCACATTaGTGCCCCCTCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLHTRPH*CPLFWV
Trigger: CACCCAGAAGAGGGGGCAGCAATGTGGTCGGGTATG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCCAGGTGGAAGCCGGTaGTGGTCACATTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLPGGSR*WSHWRP
Trigger: TGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGCACGTGTGTGCCATTaGTGTGGCTCACGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLARVCH*CGSRCR
Trigger: CCTGCAACGTGAGCCACAGCAATGGCACACACGTGC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGGGCCTTATTGGAGTTaGCGTTCTCAATCACGTTGG +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLGPYWS*RSQSRW
Trigger: CCAACGTGATTGAGAACGGCAACTCCAATAAGGCCC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTGTCACATTAATCGAGTaGCTTTTGAGTCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFVTLIE*LLSRCR
Trigger: ACGACAGCGACTCAAAAGGCACTCGATTAATGTGAC...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGGGAAGAACCAGAGATaGGTTTCTGGCCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLGKNQR*VSGLPS
Trigger: GCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGATTTTCCAACCTTCTGTaGTCACGAAAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: RSAFSASHFGTSQTPLVGFSNLL*SRKGQD
Trigger: ATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAA...TCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp CGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGAATTGACATCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RLERHDLHSQLPTSVQVRIDIKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGATGTCAAT...TCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485357.1
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGCTCACCCCAGAGCCTaGGAGAGGCAGGGGACGGTT +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVAHPRA*ERQGTV
Trigger: AACCGTCCCCTGCCTCTCCCAGGCTCTGGGGTGAGC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR CCA 90 bp TCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: SVRLWFTIFIVTSNTWALGAECR*WTVEAI
Trigger: AATGGCCTCCACCGTCCACCACCTGCACTCAGCCCC...CAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp ACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTCCGTGGAGACGTGGCTaGAGCTTCCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: TLLRLSNFSVRLWFTIFIPWRRG*SFLVTD
Trigger: GTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGG...AATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCACGTAGTCACTGACTaGAGGACAATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLHVVTD*RTIFPL
Trigger: GAGTGGGAAGATTGTCCTCCAGTCAGTGACTACGTG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: PPGETRSAFSASHFGTSQVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...CTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: CLEKSWYSTLLRLSNFSVCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...GACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: EDNLFSNLLCSRKGQDSHTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...GTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGAAGTGTTTCCCGGGTaGAACGGGTGGCATGCCACA +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHREVFPG*NGWHAT
Trigger: TGTGGCATGCCACCCGTTCCACCCGGGAAACACTTC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGAAGTGTTTCCCGGGTaGAACGGGTGGCATGCCACA +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLEVFPG*NGWHAT
Trigger: TGTGGCATGCCACCCGTTCCACCCGGGAAACACTTC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCGTTGGTGTATGTGTTaGGCACAGGGCAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLRWCMC*AQGSCC
Trigger: ACAACAGCTGCCCTGTGCCCAACACATACACCAACG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGCGTTCTCAATCACGTTaGTGTATGTGTTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPERSQSR*CMCWAQ
Trigger: CTGTGCCCAACACATACACCAACGTGATTGAGAACG...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGTTAAGAACCGAGGGATaGGTGGAGGTGCAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQLRTEG*VEVQRD
Trigger: GTCTCTCTGCACCTCCACCCATCCCTCGGTTCTTAA...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGTTTTCACCAGTATGGTaGCGTTGTACCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLFSPVW*RCTRSP
Trigger: TGGGCTCCTGGTACAACGTCACCATACTGGTGAAAA...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGCTTGCTGGAGTTCCTTaGAGTCCATTTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: RHDLHSQLPTSVQVRHHWLAGVP*SPFSPV
Trigger: TACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAG...CCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGCATAGAAACACTCATTaGCATCTTGCACCTGGACGC +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLHRNTH*HLAPGR
Trigger: GCGTCCAGGTGCAAGATGTCAATGAGTGTTTCTATG...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTTCCAGAGCAGGCATTaGGCTCCTCATAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLFQSRH*APHRNT
Trigger: AGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGGACCACGTAGTCACTaGCTGGAGGACAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLGPRSH*LEDNLP
Trigger: GGGAAGATTGTCCTCCAGTCAGTGACTACGTGGTCC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCCTGGGCATTGGTTTTaGTGGTCAGCGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLPGHWF*WSAWWR
Trigger: TCTCCACCACGCTGACCATCAAAACCAATGCCCAGG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTATGCAGGAGGGGTGGCTaGGGTACAACGAGGACTCGG +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVCRRGG*GTTRTR
Trigger: CCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCA...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCCGTCAGGACCACCTTaGGGTTGCTTTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLPSGPP*GCFSAC
Trigger: ACAGGCAGAAAAGCAACCTCAAGGTGGTCCTGACGG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp AAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCTTGACATCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 4 (lower is better)
Translates to: KTVTGDVEDHVVTDWRTILTSGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGATGTCAA...GATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491559.5
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGAGTCGATGTCCAAGCTaGAGGGGGAGGTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRSRCPS*RGRWMV
Trigger: AACCATCCACCTCCCCCTGCAGCTTGGACATCGACT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACCTGGCTGCTTGCGTTaGGAAAGGATTCTGAGTACC +
Preference number: 4 (lower is better)
Translates to: CVMLFQERQVKAPQLTSEPGCLR*ERILST
Trigger: GGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGG...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGAGTCAGTCACGTTCCTaGACTCGGGGACCTCCACTA +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRSQSRS*TRGPPL
Trigger: TAGTGGAGGTCCCCGAGTCCAGGAACGTGACTGACT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTTGTGGTTCAGGAGCCTaGGGTCCACTTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLCGSGA*GPLAGV
Trigger: AACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACA...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGACGGTGGAGGCCATTaGTTGCAGGGCGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVDGGGH*LQGAGD
Trigger: GTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp CGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAGTATGGGGGCCAGCGTaGAGATGCCCATGGGAAACC +
Preference number: 4 (lower is better)
Translates to: RLSNFSVRLWFTIFIVTSVWGPA*RCPWET
Trigger: GGTTTCCCATGGGCATCTCCACGCTGGCCCCCATAC...TGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGAGGGTGGAGGTCAATaGCAGGTCTACAGAACCGGA +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHREGGGQ*QVYRTG
Trigger: TCCGGTTCTGTAGACCTGCCATTGACCTCCACCCTC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACTGACACATGGTGGCTaGCAGGGAGCCCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVLTHGG*QGAPHH
Trigger: ATGGTGCGGGGCTCCCTGCCAGCCACCATGTGTCAG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGAGGATCTTCAGGTGGTaGATGATGCCCTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRRIFRW*MMPSWD
Trigger: GTCCCAGGAGGGCATCATCCACCACCTGAAGATCCT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCTCAGGATCTTCAGGTaGTGGATGATGCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLLRIFR*WMMPSW
Trigger: CCAGGAGGGCATCATCCACCACCTGAAGATCCTGAG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGATCCTCAGCTTGAACTaGGCCTTATTGGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQILSLN*ALLELP
Trigger: CGGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGAT...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGGTCCCCAGGACATCTaGTGTGTGGCAGAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRGPQDI*CVAEVS
Trigger: TGAAACCTCTGCCACACACCAGATGTCCTGGGGACC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCTGAAGTTGTTGGACTaGATTTTAAAGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFLKLLD*ILKLYL
Trigger: GAGATACAACTTTAAAATCCAGTCCAACAACTTCAG...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGATGGACCATCCCAAATaGAGCATCCAGCACAACCAG +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLMDHPK*SIQHNQ
Trigger: CTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCAT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp GTCACTGACTGGAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACCTTGCTGGAGTTCCTTaGAGTCCATTTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: VTDWRTICFPTFCAHERDLAGVP*SPFSPV
Trigger: TACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAG...GTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTCCAGTCAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCTTGCACCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLLAPGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGGTGCAAG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGCATAGAAACACTCATTaGCATCTTGCACCTGGACGC +
Preference number: 4 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQHRNTH*HLAPGR
Trigger: GCGTCCAGGTGCAAGATGTCAATGAGTGTTTCTATG...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp AGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCGTGTCCTGGCGCTCCTaGGCAACTCCATACCCCGGT +
Preference number: 4 (lower is better)
Translates to: SNFSVRLWFTIFIVTSNTVSWRS*ATPYPG
Trigger: ACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACAC...GGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAAGTCCTCACTTTCAGATaGGCTCTGGCACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CVMLFQERQVKAPQLTSEVLTFR*ALAPSF
Trigger: GAAAGAAGGTGCCAGAGCTCATCTGAAAGTGAGGAC...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGAGCCCCGCACCATCCTaGAGAATAGTTCTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLSPAPS*RIVLGN
Trigger: ATTTCCTAGAACTATTCTTCAGGATGGTGCGGGGCT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACCTTCAGACCGGATaGGGGGTCCCCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVHLQTG*GVPRTS
Trigger: AGATGTCCTGGGGACCCCTCATCCGGTCTGAAGGTG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCATTGAGGCTGGGAGCTTaGGAACAGCCTGGGCTACTC +
Preference number: 4 (lower is better)
Translates to: RLSNFSVRLWFTIFIVTSLRLGA*EQPGLL
Trigger: GAGTAGCCCAGGCTGTTCTCAAGCTCCCAGCCTCAA...TGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGCTGGTGACCAAGGAATaGAGAAGGCGCATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRLVTKE*RRRMWF
Trigger: GAACCACATGCGCCTTCTGCATTCCTTGGTCACCAG...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVVEAIG*RALVTK
Trigger: CTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCAC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTCGAGCCCTCCAGGTTTaGGCACAGTTCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGRALQV*AQFPSR
Trigger: TCTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCG...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGCAATCTGGAACACTGTaGTTGCCAACAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRQSGTL*LPTGAG
Trigger: TCCAGCCCCTGTTGGCAAGCACAGTGTTCCAGATTG...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGTCACATTAATCGAGTaGCTTTTGAGTCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLVTLIE*LLSRCR
Trigger: ACGACAGCGACTCAAAAGGCACTCGATTAATGTGAC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGTTTCCCTGTAGCTCCTaGTCCACGCCTTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRFPCSS*STPFPV
Trigger: CACAGGAAAAGGCGTGGAGCAGGAGCTACAGGGAAA...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTATGTCACCCAGCAGGGTaGAGACGTCAGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVCHPAG*RRQPQA
Trigger: TGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACA...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVASVET*LELPGD
Trigger: GTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTGTCAGACACCACTGGTaGGAAGGAGCTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGVRHHW*EGALDL
Trigger: GAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGAC...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGCAGCTGACACCTCCTaGACATCCACATCTGCGATT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLAADTS*TSTSAI
Trigger: AATCGCAGATGTGGATGTCCAGGAGGTGTCAGCTGC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGCCTCTCTGGGCTGGTaGCCCAGGTTTCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVASLGW*PRFHCQ
Trigger: CTGGCAATGAAACCTGGGCCACCAGCCCAGAGAGGC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGCACGATCAGAAGGGTaGCTGTTCCCGCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVARSEG*LFPPPA
Trigger: TGCTGGTGGCGGGAACAGCCACCCTTCTGATCGTGC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCTGAAGTTGTTGGACTaGATTTTAAAGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGLKLLD*ILKLYL
Trigger: GAGATACAACTTTAAAATCCAGTCCAACAACTTCAG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACCCTTCATCTGCCCCTaGGCTGTGGCTCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVPFICP*AVAPLG
Trigger: TCCTAGAGGAGCCACAGCCCAGGGGCAGATGAAGGG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTTTTTCACCAGTATGGTaGCGTTGTACCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLFSPVW*RCTRSP
Trigger: TGGGCTCCTGGTACAACGTCACCATACTGGTGAAAA...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp CTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGGAGCTCTCGACCTCGTaGAGCAGTTGTCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LLRLSNFSVRLWFTIFIVELSTS*SSCLEK
Trigger: CTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTC...CACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGAAAAGATCCTCAGCTTaGACTGGGCCTTATTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLKRSSA*TGPYWS
Trigger: ACTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGCTCGATACTCCTGGCTaGTTGCGTTGCGAAAGGATT +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRLDTPG*LRCERI
Trigger: AATCCTTTCGCAACGCAAGCAGCCAGGAGTATCGAG...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACTCCGGGGGATTCCATaGAGACGCGGAGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVLRGIP*RRGVCS
Trigger: ACTGCAAACTCCGCGTCTGCATGGAATCCCCCGGAG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTGAGGTTTCACTATTTTaGAGCAACCGAAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: RACDGPSQMEHPAQPATFEVSLF*SNRKLL
Trigger: CAATAACTTTCGGTTGCTGCAAAATAGTGAAACCTC...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp CAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTCAGAGCTTAGTGGGGTaGCGTGGGATGTGGACGTGG +
Preference number: 4 (lower is better)
Translates to: QVVVYNLYCDFKYLGIGFQSLVG*RGMWTW
Trigger: CCACGTCCACATCCCACGGCACCCCACTAAGCTCTG...AAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp GTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTGATGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: VVVYNLYCDFKYLGIGFDGAECR*WTVEAI
Trigger: AATGGCCTCCACCGTCCACCACCTGCACTCAGCCCC...ATCAAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GTCACTGACTGGAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: VTDWRTICFPTFCAHERDVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...GTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTCCAGTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp CTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGTGTCTAGAAAAGTCCTaGTACTCCACACTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LLRLSNFSVRLWFTIFIVCLEKS*YSTLLR
Trigger: CCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA...CACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTATGTGTGCCATTGCTGTaGCTCACGTTGCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVCVPLL*LTLQEG
Trigger: CCCCTCCTGCAACGTGAGCCACAGCAATGGCACACA...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTATGGATGATGCCCTCCTaGGACAGGTCGTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVWMMPS*DRSFLS
Trigger: GCTGAGGAACGACCTGTCCCAGGAGGGCATCATCCA...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTATCCTCAGCTTGAACTaGGCCTTATTGGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLILSLN*ALLELP
Trigger: CGGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGAT...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
3UTR CAA 72 bp TGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATC +
Preference number: 4 (lower is better)
Translates to: CLEKSWYSTLLR*SNFSVRLWFTI
Trigger: GATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGCTTGCACCTGGACGCTaGTCACTTCATAGACACGCT +
Preference number: 4 (lower is better)
Translates to: SVRLWFTIFIVTSNTWALLAPGR*SLHRHA
Trigger: AGCGTGTCTATGAAGTGATCAGCGTCCAGGTGCAAG...CAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000497243.5
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTAGCCCCGCACCATCCTaGAGAATAGTTCTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLSPAPS*RIVLGN
Trigger: ATTTCCTAGAACTATTCTTCAGGATGGTGCGGGGCT...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp GTCACTGACTGGAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACCATAGAAACACTCATTaGCATCAAGGAATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VTDWRTICFPTFCAHERDHRNTH*HQGMQK
Trigger: CTTCTGCATTCCTTGATGTCAATGAGTGTTTCTATG...GTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTCCAGTCAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485357.1
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAAGTCAGTCACGTTCCTaGACTCGGGGACCTCCACTA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVSQSRS*TRGPPL
Trigger: TAGTGGAGGTCCCCGAGTCCAGGAACGTGACTGACT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: QVVVYNLYCDFKYLGIGFRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...AAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp AGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTGCGCACCCCTGGTAGCTaGTCTTCACCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: RLWFTIFIVTSNTWALVLRTPGS*SSPCTA
Trigger: TGCTGTACAGGGTGAAGACCAGCTACCAGGGGTGCG...CAAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTACCACACTTCCCGCCTaGAGAGACACGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGTTLPA*RDTICI
Trigger: AATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGT...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGAGGGTGGAGGTCAATaGCAGGTCTACAGAACCGGA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVEGGGQ*QVYRTG
Trigger: TCCGGTTCTGTAGACCTGCCATTGACCTCCACCCTC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAAGCAGAGGCACGGTCTaGAAGGCGGTGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVSRGTV*KAVRNA
Trigger: TGCATTTCTCACCGCCTTCCAGACCGTGCCTCTGCT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAAAATTCCCAGCGCCGTaGAGGTCCTCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVKFPAP*RSSMMV
Trigger: CACCATCATCGAGGACCTCCACGGCGCTGGGAATTT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTCGTTCTCAATCACGTTaGTGTATGTGTTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLRSQSR*CMCWAQ
Trigger: CTGTGCCCAACACATACACCAACGTGATTGAGAACG...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGGTCCCCAGGACATCTaGTGTGTGGCAGAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVGPQDI*CVAEVS
Trigger: TGAAACCTCTGCCACACACCAGATGTCCTGGGGACC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGTTCTTACTGGCCAATTaGGCAGTCCCCTTAACAAGC +
Preference number: 4 (lower is better)
Translates to: LLRLSNFSVRLWFTIFIVFLLAN*AVPLTS
Trigger: GCTTGTTAAGGGGACTGCCCAATTGGCCAGTAAGAA...CACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR TCA 90 bp CTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTTCCAGAGCAGGCATTaGGCTCCTCATAGAAACACT +
Preference number: 4 (lower is better)
Translates to: LRLSNFSVRLWFTIFIVTFQSRH*APHRNT
Trigger: AGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAA...AGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR TCA 90 bp CAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTCCACACTGCTGCGGTTaGGTAACTTCTCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QVVVYNLYCDFKYLGIGFPHCCG*VTSPSG
Trigger: ACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGG...AAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp ATGGAGCATCCAGCACAACCAGCCACATTTCAGTGTCTTATGCGATTGATTCTAAGAACACCTGGTAGCTaGAGTTGTTGGACTGGATTT +
Preference number: 4 (lower is better)
Translates to: MEHPAQPATFQCLMRLILRTPGS*SCWTGF
Trigger: AAATCCAGTCCAACAACTTCAGCTACCAGGTGTTCT...TAGAATCAATCGCATAAGACACTGAAATGTGGCTGGTTGTGCTGGATGCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR TCA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACTTGATCAGAATCTGTaGTCCACACATATTACCCAC +
Preference number: 4 (lower is better)
Translates to: CVMLFQERQVKAPQLTSELDQNL*STHITH
Trigger: GTGGGTAATATGTGTGGATCACAGATTCTGATCAAG...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGAGAGAGATTTGAGGTaGATGGAGGGAAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVERDLR*MEGSPE
Trigger: CTCAGGGCTTCCCTCCATGCACCTCAAATCTCTCTC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTACCTTCTTTCCCACATaGTTTGGCCATGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLTFFPT*FGHDLN
Trigger: GTTGAGATCATGGCCAAAGCATGTGGGAAAGAAGGT...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACCTGGCTGCTTGCGTTaGGAAAGGATTCTGAGTACC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVPGCLR*ERILST
Trigger: GGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCCTAAATCCAATGACTaGCATCCTTACAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLPKSND*HPYKRK
Trigger: CTTCCTTTTGTAAGGATGCCAGTCATTGGATTTAGG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS-3UTR TCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGTCCTCACTTTCAGATaGGCTCTGGCACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVVLTFR*ALAPSF
Trigger: GAAAGAAGGTGCCAGAGCTCATCTGAAAGTGAGGAC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGAGTGTCTTATGCGATTaGTTCTACTTGATCAGAATC +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLSVLCD*FYLIRI
Trigger: GATTCTGATCAAGTAGAATCAATCGCATAAGACACT...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR GCA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGAGGTTTCACTATTTTaGAGCAACCGAAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLEVSLF*SNRKLL
Trigger: CAATAACTTTCGGTTGCTGCAAAATAGTGAAACCTC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGAGAAGCCATGGAGATTaGAGTGATCCATCTACAATG +
Preference number: 4 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRRSHGD*SDPSTM
Trigger: CATTGTAGATGGATCACTCCAATCTCCATGGCTTCT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
3UTR CAA 72 bp TCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATTGTGACTTCAAATACC +
Preference number: 4 (lower is better)
Translates to: STLLRLSNFSVR*WFTIFIVTSNT
Trigger: GGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR TCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACATAGAAACACTCATTaGCATCTTGCACCTGGACGC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVHRNTH*HLAPGR
Trigger: GCGTCCAGGTGCAAGATGTCAATGAGTGTTTCTATG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR TCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGTTGCGAAAGGATTCTaGGTACCTGACATTTTTGAT +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLVAKGF*VPDIFD
Trigger: ATCAAAAATGTCAGGTACTCAGAATCCTTTCGCAAC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp CGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTTCCAACCTTCTGTaGTCACGAAAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: RQVVVYNLYCDFKYLGIGFSNLL*SRKGQD
Trigger: ATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAA...ACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACTTTCAGATGAGCTCTaGCACCTTCTTTCCCACATG +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVLSDEL*HLLSHM
Trigger: CATGTGGGAAAGAAGGTGCCAGAGCTCATCTGAAAG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAAAATCTCGATACTCCTaGCTGCTTGCGTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVKSRYS*LLALRK
Trigger: CTTTCGCAACGCAAGCAGCCAGGAGTATCGAGATTT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp CGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCACACGTAGTCACTGACTaGAGGACAATCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RLSNFSVRLWFTIFIVTSHVVTD*RTICFP
Trigger: TGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTG...TGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR GCA 90 bp AGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTGTGGAGAGACACGATCTaGATTCTCAGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: RLWFTIFIVTSNTWALVLWRDTI*ILSFPL
Trigger: AAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCA...CAAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR GCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAACCTTCTTTCCCACATaGTTTGGCCATGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVTFFPT*FGHDLN
Trigger: GTTGAGATCATGGCCAAAGCATGTGGGAAAGAAGGT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR GCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTGAGGTTTCACTATTTTaGAGCAACCGAAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLEVSLF*SNRKLL
Trigger: CAATAACTTTCGGTTGCTGCAAAATAGTGAAACCTC...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGTGACTTCAAATACCTaGGCATTGGTTTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVVTSNT*ALVLMV
Trigger: GACCATCAAAACCAATGCCCAGGTATTTGAAGTCAC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTATAAAAGCAATACCTTaGTACACAGGAGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLIKAIP*YTGEKS
Trigger: TGACTTTTCTCCTGTGTACCAAGGTATTGCTTTTAT...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CCA 90 bp GTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTGATCACGTAGTCACTGACTaGAGGACAATCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VVVYNLYCDFKYLGIGFDHVVTD*RTICFP
Trigger: TGGAAAACAGATTGTCCTCCAGTCAGTGACTACGTG...ATCAAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
3UTR CAA 72 bp CTTATTGAAAAGGTTGTCACATTAATCGAGTGCCTTTaGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTG +
Preference number: 4 (lower is better)
Translates to: LIEKVVTLIECL*SRCRVNKSNTL
Trigger: CAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAATGTGACAACCTTTTCAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.6
ENST00000408989.6
CDS-3UTR CCA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACTGAAGTTGTTGGACTaGATTTTAAAGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVLKLLD*ILKLYL
Trigger: GAGATACAACTTTAAAATCCAGTCCAACAACTTCAG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS CCA 90 bp CAGGCAGTGGCCGTGGCAGGCCCAGTAGCAGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTGAGTGCAGGTGGTGGACGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: QAVAVAGPVAAATLW*RRSQGLSAGGGRWR
Trigger: CCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGCTACTGGGCCTGCCACGGCCACTGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGATGGGGTCCCGGGCGTaGCTAGACGGGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGMGSRA*LDGVAQ
Trigger: CTGGGCAACCCCGTCTAGCAACGCCCGGGACCCCAT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS CCA 90 bp CGCGACACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTGACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: RDTVVEAFPGAECRW*TVEAIGCRALVTWV
Trigger: GACCCAGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS CCA 90 bp AGCCGCGACACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: SRDTVVEAFPGAECR*WTVEAIGCRALVTW
Trigger: CCAGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGGACCGTTACCCCTGTaGCCGCAGACAGTCCACCGC +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGGPLPL*PQTVHR
Trigger: GCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTCC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS GCA 90 bp AGTAGCAGCCGCGACACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SSSRDTVVEAFPGAE*RWWTVEAIGCRALV
Trigger: CACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS GCA 90 bp GAGGGCTGCTGTTCCCGTGCCAAGACCTGGGACCGTTACCCCTGTTaGCGCAGACAGTCCACCGCCCATGGGGCTCACCAGGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: EGCCSRAKTWDRYPC*RRQSTAHGAHQVTL
Trigger: GAGGGTGACCTGGTGAGCCCCATGGGCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTCCCAGGTCTTGGCACGGGAACAGCAGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 90 bp AGCCGCGACACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTGACCAAG +
Preference number: 5 (lower is better)
Translates to: SRDTVVEAFPGAECR*WTVEAIGCRALVTK
Trigger: CTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000491559.5
CDS CCA 90 bp CGCGACACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTGACCCAAGGT +
Preference number: 5 (lower is better)
Translates to: RDTVVEAFPGAECRW*TVEAIGCRALVTQG
Trigger: ACCTTGGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS CCA 90 bp AGCCGCGACACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTGACCCAA +
Preference number: 5 (lower is better)
Translates to: SRDTVVEAFPGAECR*WTVEAIGCRALVTQ
Trigger: TTGGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTGTCCCTCTCTGGAGCTaGGGGTGCAGGGGCCATGCA +
Preference number: 5 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCVPLWS*GCRGHA
Trigger: TGCATGGCCCCTGCACCCCAAGCTCCAGAGAGGGAC...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGGTGGGGCTGGTGCCTaGCACAAAGGCAGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGGGAGA*HKGSLG
Trigger: ACCAAGGCTGCCTTTGTGCAAGGCACCAGCCCCACC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS TCA 90 bp CGTCCCTGGTGGTACGGCACTGGCAGGTGTAGGAGCCCTCCAGGTTaGTGCACCAGGCAGCCGGTGAGCAGTCGTGTTCCGCGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RPWWYGTGRCRSPPG*CTRQPVSSRVPRCP
Trigger: TGGACAGCGCGGAACACGACTGCTCACCGGCTGCCTGGTGCATCAACCTGGAGGGCTCCTACACCTGCCAGTGCCGTACCACCAGGGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 90 bp GGCAGAGCAGGGCCATCCCTTCAGTTCCCGGGAGTAACCAGGAGATaGACAGGCCCCCAGATCCACCTCGGTCCAGCCCAAGGGACCCAG +
Preference number: 5 (lower is better)
Translates to: GRAGPSLQFPGVTRR*TGPQIHLGPAQGTQ
Trigger: CTGGGTCCCTTGGGCTGGACCGAGGTGGATCTGGGGGCCTGTGCATCTCCTGGTTACTCCCGGGAACTGAAGGGATGGCCCTGCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400423.6
ENST00000484174.5
CDS CCA 90 bp CGCGACACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTGACCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RDTVVEAFPGAECRW*TVEAIGCRALVTKE
Trigger: TTCCTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACGAGCCCTCCAGGTTaGCGCACAGTTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGTSPPG*RTVPFQ
Trigger: CTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTATGGGGTCCCGGGCGTaGCTAGACGGGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLMGSRA*LDGVAQ
Trigger: CTGGGCAACCCCGTCTAGCAACGCCCGGGACCCCAT...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS CCA 90 bp TTCAGAAGTGTTTCCCGGGTGGAACGGGTGGCATGCCACAGGAAGTaGCCGGTGGGGTCCTCAGTAGGGGAAGGCCAGGAGGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: FRSVSRVERVACHRK*PVGSSVGEGQEGGS
Trigger: GGAGCCACCCTCCTGGCCTTCCCCTACTGAGGACCCCACCGGCCACTTCCTGTGGCATGCCACCCGTTCCACCCGGGAAACACTTCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 90 bp CACTCGCTCCAGCCGGCCTCCAGGAGCACGTGTGTGCCATTGCTGTaGCTCACGTTGCAGGAGGGGTGGCTGAGGTACAACGAGGACTCG +
Preference number: 5 (lower is better)
Translates to: HSLQPASRSTCVPLL*LTLQEGWLRYNEDS
Trigger: CGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCACACACGTGCTCCTGGAGGCCGGCTGGAGCGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGGACCGTTACCCCTGTaGCCGCAGACAGTCCACCGC +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPGPLPL*PQTVHR
Trigger: GCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTCC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGTCATACCCGACCACATaGCTGCCCCCTCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGSYPTT*LPPLLG
Trigger: ACCCAGAAGAGGGGGCAGCAATGTGGTCGGGTATGA...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGGCTCTGTGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACGGTGGAGGCCATTGGTaGCAGGGCGCTGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: LALCPGAPEQLHTPVNPDGGGHW*QGAGDP
Trigger: TGGGTCACCAGCGCCCTGCAACCAATGGCCTCCACC...GTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACACAGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGGTCCCTCTCTGGAGCTaGGGGTGCAGGGGCCATGCA +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLVPLWS*GCRGHA
Trigger: TGCATGGCCCCTGCACCCCAAGCTCCAGAGAGGGAC...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCEPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CAGCGTGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTAGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: QRGGDVGPAPLVAGLHPVEPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...TACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCACGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGTCTGGAACACTGTGCTaGCCAACAGGGGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGSGTLC*PTGAGV
Trigger: TACTCCAGCCCCTGTTGGCAAGCACAGTGTTCCAGA...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACACTCGTCCCAGTCTaGCACGCGTGTCCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTLVPV*HACPLP
Trigger: CGGCAGGGGACACGCGTGCAAGACTGGGACGAGTGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTCCGGTGCTGGTCACATaGGAGACCATGATCCTCCCA +
Preference number: 5 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCPVLVT*ETMILP
Trigger: TGGGAGGATCATGGTCTCCAATGTGACCAGCACCGG...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGTCCGTCAGGACCACCTaGAGGTTGCTTTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGSVRTT*RLLFCL
Trigger: CAGGCAGAAAAGCAACCTCAAGGTGGTCCTGACGGA...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACACAGCACCGGCCCTCGTTGGAGGTTCTGGAGGCAGCTaGACTCACGGCGACCTTCCT +
Preference number: 5 (lower is better)
Translates to: RCVSGLPSVPNTAPALVGGSGGS*THGDLP
Trigger: AGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACC...TCCAACGAGGGCCGGTGCTGTGTTGGGCACGCTGGGGAGGCCAGAAACGCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS TCA 90 bp AGTGCAGGTGGTGGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTaGCCCAAGGTCACACAGCTGATGAGTGGCAACACTAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SAGGGRWRPLVAGRW*PKVTQLMSGNTRAR
Trigger: CCTGGCCCTAGTGTTGCCACTCATCAGCTGTGTGACCTTGGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS GCA 90 bp TTCCCAGGGGCTGAGTGCAGGTGGTGGACGGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCCAAGGTCACACAGCTGATGAGTGGCAA +
Preference number: 5 (lower is better)
Translates to: FPGAECRWWTVEAIG*RALVTQGHTADEWQ
Trigger: TTGCCACTCATCAGCTGTGTGACCTTGGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS GCA 90 bp CAAGGAGGGTGCAGGCAGCCCCCGTCTGTCTCACCTACCAAGGAATaGAGAAGGCGCATGTGGTTCAGGAGCCTGGGGTCCACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: QGGCRQPPSVSPTKE*RRRMWFRSLGSTCW
Trigger: CCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGGTAGGTGAGACAGACGGGGGCTGCCTGCACCCTCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS CCA 90 bp CAAGGCCACGTGCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGACAGACGCACCAGTACGAGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: QGHVLPTPGSASVET*LELPGDRRTSTSPP
Trigger: TGGAGGGCTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGCACGTGGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466434.5
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTACGAGCCCTCCAGGTTaGCGCACAGTTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPTSPPG*RTVPFQ
Trigger: CTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCACACTCGTCCCAGTCTaGCACGCGTGTCCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFTLVPV*HACPLP
Trigger: CGGCAGGGGACACGCGTGCAAGACTGGGACGAGTGT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCACGGTGTTCGTCATGTaGCTCTGCATGAGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCTVFVM*LCMRVP
Trigger: TGGGACCCTCATGCAGAGCAACATGACGAACACCGT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS TCA 90 bp GCACGTGTGTGCCATTGCTGTGGCTCACGTTGCAGGAGGGGTGGCTaGGGTACAACGAGGACTCGGGGATGGATTCCTGCTGCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: ARVCHCCGSRCRRGG*GTTRTRGWIPAAGS
Trigger: GCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCACACACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 90 bp AGAAGCCATGGAGATTGGAGTGATCCATCTACAATGAGCCCGGGATaGCAGGAAGGGCTCACCCCAGAGCCTGGGAGAGGCAGGGGACGG +
Preference number: 5 (lower is better)
Translates to: RSHGDWSDPSTMSPG*QEGLTPEPGRGRGR
Trigger: CCGTCCCCTGCCTCTCCCAGGCTCTGGGGTGAGCCCTTCCTGGCATCCCGGGCTCATTGTAGATGGATCACTCCAATCTCCATGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000400427.5
CDS CCA 90 bp TGTCCTCATTTCGCAGCCACGTGGGATTCAGAAGTGTTTCCCGGGTaGAACGGGTGGCATGCCACAGGAAGTGGCCGGTGGGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: CPHFAATWDSEVFPG*NGWHATGSGRWGPQ
Trigger: CTGAGGACCCCACCGGCCACTTCCTGTGGCATGCCACCCGTTCCACCCGGGAAACACTTCTGAATCCCACGTGGCTGCGAAATGAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 90 bp AGGAGCACGTGTGTGCCATTGCTGTGGCTCACGTTGCAGGAGGGGTaGCTGAGGTACAACGAGGACTCGGGGATGGATTCCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RSTCVPLLWLTLQEG*LRYNEDSGMDSCCR
Trigger: CCTGCAGCAGGAATCCATCCCCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCACACACGTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 90 bp GAGACCTCGTCTCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGACAGACGCACCAGTACGAGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: ETSSLPTPGSASVET*LELPGDRRTSTSPP
Trigger: TGGAGGGCTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGAGACGAGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGGTGGAGGCCATTGGTaGCAGGGCGCTGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFGGGHW*QGAGDQ
Trigger: TTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTACGCCTTTTCCTGTGTaGTTCCTGTCATACCCGACC +
Preference number: 5 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCTPFPV*FLSYPT
Trigger: GGTCGGGTATGACAGGAACAACACAGGAAAAGGCGT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCCGGTGCTGGTCACATaGGAGACCATGATCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPPVLVT*ETMILP
Trigger: TGGGAGGATCATGGTCTCCAATGTGACCAGCACCGG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACCACGATGCTGCCGTaGGTGACGCTGACGACTTCC +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTTMLP*VTLTTS
Trigger: GGAAGTCGTCAGCGTCACCAACGGCAGCATCGTGGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTTGCTGTGGCTCACGTaGCAGGAGGGGTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFLLWLT*QEGWLR
Trigger: CCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAA...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTCAGCACCGGCCCTCGTaGGATGCTCAGCGAGCCTGT +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGQHRPS*DAQRAC
Trigger: ACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTG...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS TCA 90 bp TCCTCCCAATGGAGACAGGAACACAGGCGGGGGTCTTCAGAGCTGTaGGGGTGGAGGTCAATGGCAGGTCTACAGAACCGGAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: SSQWRQEHRRGSSEL*GWRSMAGLQNRRVH
Trigger: GTGGACCCTCCGGTTCTGTAGACCTGCCATTGACCTCCACCCTCACAGCTCTGAAGACCCCCGCCTGTGTTCCTGTCTCCATTGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 90 bp CCTCCCATGCCAGGTGGAAGCCGGTGCTGGTCACATTGGAGACCATaGTCCTCCCAATGGAGACAGGAACACAGGCGGGGGTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: PPMPGGSRCWSHWRP*SSQWRQEHRRGSSE
Trigger: CTCTGAAGACCCCCGCCTGTGTTCCTGTCTCCATTGGGAGGATCATGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGGCATGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 90 bp CAGGAGGGGTGGCTGAGGTACAACGAGGACTCGGGGATGGATTCCTaGTGCAGGAAGCGCTTCTGGATGGCGACAACCACCTTCTCGATC +
Preference number: 5 (lower is better)
Translates to: QEGWLRYNEDSGMDS*CRKRFWMATTTFSI
Trigger: GATCGAGAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 90 bp GTGGATCTCAAGGCCACGTGCTTCCCACTCCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTCCTGGTGACAGACGCACCAGTACGA +
Preference number: 5 (lower is better)
Translates to: VDLKATCFPLQVQLP*RRGWSFLVTDAPVR
Trigger: TCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGCACGTGGCCTTGAGATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466434.5
CDS CCA 90 bp GTCACCACAGGCGGGGGTCTTCAGAGCTGTGAGGGTGGAGGTCAATaGCAGGTCTACAGAACCGGAGGGTCCACTGTCCTCATTTCGCAG +
Preference number: 5 (lower is better)
Translates to: VTTGGGLQSCEGGGQ*QVYRTGGSTVLISQ
Trigger: CTGCGAAATGAGGACAGTGGACCCTCCGGTTCTGTAGACCTGCCATTGACCTCCACCCTCACAGCTCTGAAGACCCCCGCCTGTGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGGTGGAGGCCATTGGTaGCAGGGCGCTGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGGGGHW*QGAGDQ
Trigger: TTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGCTTGAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCGGTGGAGGCCATTGGTaGCAGGGCGCTGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: SLSLTTTLPAWRDTICILGGGHW*QGAGDQ
Trigger: TTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACC...GAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR CAA 90 bp GAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTGGTGGAGGCCATTGGTaGCAGGGCGCTGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: EPHDHTSRLERHDLHSQLGGGHW*QGAGDQ
Trigger: TTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACC...AAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTACACTCATTGACATCTaGCACCTGGACGCTGATCAC +
Preference number: 5 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCTLIDI*HLDADH
Trigger: GTGATCAGCGTCCAGGTGCAAGATGTCAATGAGTGT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CAGCGTGGTGGAGACGTCGGCCCCGCACCCCTGGTAGCTGGTCTTCACCCTGTAACACTCATTGACATCTaGCACCTGGACGCTGATCAC +
Preference number: 5 (lower is better)
Translates to: QRGGDVGPAPLVAGLHPVTLIDI*HLDADH
Trigger: GTGATCAGCGTCCAGGTGCAAGATGTCAATGAGTGT...TACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCACGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466434.5
ENST00000468982.5
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTCATACCCGACCACATaGCTGCCCCCTCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLSYPTT*LPPLLG
Trigger: ACCCAGAAGAGGGGGCAGCAATGTGGTCGGGTATGA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAACCGGTGCTGGTCACATaGGAGACCATGATCCTCCCA +
Preference number: 5 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQPVLVT*ETMILP
Trigger: TGGGAGGATCATGGTCTCCAATGTGACCAGCACCGG...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTGTGGCCCAGGTTTCATaGCCAGGAGAGTCACCTTCA +
Preference number: 5 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLVAQVS*PGESPS
Trigger: TGAAGGTGACTCTCCTGGCAATGAAACCTGGGCCAC...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTGCACAAAGGCAGCCTaGGTCCCTGCTGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLCTKAA*VPAVVR
Trigger: TCTCACCACAGCAGGGACCAAGGCTGCCTTTGTGCA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTACGGTGTTCGTCATGTaGCTCTGCATGAGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLTVFVM*LCMRVP
Trigger: TGGGACCCTCATGCAGAGCAACATGACGAACACCGT...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTTCCGTCAGGACCACCTaGAGGTTGCTTTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPSVRTT*RLLFCL
Trigger: CAGGCAGAAAAGCAACCTCAAGGTGGTCCTGACGGA...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTACGTTGGTGTATGTGTaGGGCACAGGGCAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GPTGRPASSGQTVAAVFLTLVYV*GTGQLL
Trigger: CAACAGCTGCCCTGTGCCCAACACATACACCAACGT...AAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS TCA 90 bp CCTGGGCATACGACGAGGCCCTTACTCAGGCCCCCAACATCAGGGTaGCCAATGGGTTCCAACCTGCCCGGGAGGTTCCAGAATTTAGCT +
Preference number: 5 (lower is better)
Translates to: PGHTTRPLLRPPTSG*PMGSNLPGRFQNLA
Trigger: AGCTAAATTCTGGAACCTCCCGGGCAGGTTGGAACCCATTGGTCACCCTGATGTTGGGGGCCTGAGTAAGGGCCTCGTCGTATGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS TCA 90 bp GTGAATCTCCTGAGATGTCACCACAGGCGGGGGTCTTCAGAGCTGTaGGGGTGGAGGTCAATGGCAGGTCTACAGAACCGGAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: VNLLRCHHRRGSSEL*GWRSMAGLQNRRVH
Trigger: GTGGACCCTCCGGTTCTGTAGACCTGCCATTGACCTCCACCCTCACAGCTCTGAAGACCCCCGCCTGTGGTGACATCTCAGGAGATTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS GCA 90 bp GAGGGGTGGCTGAGGTACAACGAGGACTCGGGGATGGATTCCTGCTaGAGGAAGCGCTTCTGGATGGCGACAACCACCTTCTCGATCTCA +
Preference number: 5 (lower is better)
Translates to: EGWLRYNEDSGMDSC*RKRFWMATTTFSIS
Trigger: TGAGATCGAGAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGTTGTACCTCAGCCACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 90 bp GGTCTACAGAACCGGAGGGTCCACTGTCCTCATTTCGCAGCCACGTaGGATTCAGAAGTGTTTCCCGGGTGGAACGGGTGGCATGCCACA +
Preference number: 5 (lower is better)
Translates to: GLQNRRVHCPHFAAT*DSEVFPGWNGWHAT
Trigger: TGTGGCATGCCACCCGTTCCACCCGGGAAACACTTCTGAATCCCACGTGGCTGCGAAATGAGGACAGTGGACCCTCCGGTTCTGTAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 90 bp AGGAACACAGGCGGGGGTCTTCAGAGCTGTGAGGGTGGAGGTCAATaGCAGGTCTACAGAACCGGAGGGTCCACTGTCCTCATTTCGCAG +
Preference number: 5 (lower is better)
Translates to: RNTGGGLQSCEGGGQ*QVYRTGGSTVLISQ
Trigger: CTGCGAAATGAGGACAGTGGACCCTCCGGTTCTGTAGACCTGCCATTGACCTCCACCCTCACAGCTCTGAAGACCCCCGCCTGTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 90 bp GTCTCTAGGACCACAGCAGGGCTCCACATGGAAGTCAGAGTGAGCTaGAAGGTGGAGTCCATAGCAAGATCCGCCTCCCATGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VSRTTAGLHMEVRVS*KVESIARSASHARW
Trigger: CCACCTGGCATGGGAGGCGGATCTTGCTATGGACTCCACCTTCCAGCTCACTCTGACTTCCATGTGGAGCCCTGCTGTGGTCCTAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 90 bp CAGCCCCCGTCTGTCTCACCTACCAAGGAATGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCCTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: QPPSVSPTKECRRRM*FRSLGSTCWSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGGTAGGTGAGACAGACGGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CAA 90 bp GGACATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCAACCAGTATGGTGACGTaGTACCAGGAGCCCACAGGG +
Preference number: 5 (lower is better)
Translates to: GHDLGRTRDAFLASPACPTSMVT*YQEPTG
Trigger: CCCTGTGGGCTCCTGGTACAACGTCACCATACTGGT...TGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp CTGCCCCTGGGCTGTGGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: LPLGCGSSRTYRTACLFGTCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...CCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCCACAGCCCAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACACTCATTGACATCTaGCACCTGGACGCTGATCAC +
Preference number: 5 (lower is better)
Translates to: DAHGKPGVLHGELEPHDHTLIDI*HLDADH
Trigger: GTGATCAGCGTCCAGGTGCAAGATGTCAATGAGTGT...GTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
CDS-3UTR CAA 90 bp CTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCAACGAGCCCTCCAGGTTaGCGCACAGTTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LTTTLPAWRDTICILSFPTSPPG*RTVPFQ
Trigger: CTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGT...TGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CAA 90 bp GCCAGCGTGGAGATGCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: ASVEMPMGNPGSCTVSLSDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...GCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCAGCACGTGTGTGCCATaGCTGTGGCTCACGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFSTCVP*LWLTLQ
Trigger: CTGCAACGTGAGCCACAGCAATGGCACACACGTGCT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAACGGTGTTCGTCATGTaGCTCTGCATGAGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQTVFVM*LCMRVP
Trigger: TGGGACCCTCATGCAGAGCAACATGACGAACACCGT...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTTTGAACTGGGCCTTATaGGAGTTGCCGTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCLNWAL*ELPFSI
Trigger: GATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAA...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS TCA 90 bp AATATTCCACAGGGAAGTCGGGGGCTCCTCCCTCGCAGCTACAAGTaGAAGACCCGAGGGTGTTTCGACAGGATGTCCCCGGCACACAGT +
Preference number: 5 (lower is better)
Translates to: NIPQGSRGLLPRSYK*KTRGCFDRMSPAHS
Trigger: ACTGTGTGCCGGGGACATCCTGTCGAAACACCCTCGGGTCTTTCACTTGTAGCTGCGAGGGAGGAGCCCCCGACTTCCCTGTGGAATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000484174.5
CDS TCA 90 bp GGATCTCTTGAGGCTGGGAGCTTGAGAACAGCCTGGGCTACTCAGTaGGACCTCGTCTCTTCCCACTCCAGGTTCAGCTTCCGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: GSLEAGSLRTAWATQ*DLVSSHSRFSFRGD
Trigger: GTCTCCACGGAAGCTGAACCTGGAGTGGGAAGAGACGAGGTCTCACTGAGTAGCCCAGGCTGTTCTCAAGCTCCCAGCCTCAAGAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS GCA 90 bp CAGAGTGAGCTGGAAGGTGGAGTCCATAGCAAGATCCGCCTCCCATaGCAGGTGGAAGCCGGTGCTGGTCACATTGGAGACCATGATCCT +
Preference number: 5 (lower is better)
Translates to: QSELEGGVHSKIRLP*QVEAGAGHIGDHDP
Trigger: AGGATCATGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGCGGATCTTGCTATGGACTCCACCTTCCAGCTCACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 90 bp AGAGGCCGAGCTGTTCATAGCCCTCACAGCAGTCAGTCACGTTCCTaGACTCGGGGACCTCCACTACCAGGTACTGTGTCCGGTAAACCA +
Preference number: 5 (lower is better)
Translates to: RGRAVHSPHSSQSRS*TRGPPLPGTVSGKP
Trigger: TGGTTTACCGGACACAGTACCTGGTAGTGGAGGTCCCCGAGTCCAGGAACGTGACTGACTGCTGTGAGGGCTATGAACAGCTCGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 90 bp AGCTGGAAGGTGGAGTCCATAGCAAGATCCGCCTCCCATGCCAGGTaGAAGCCGGTGCTGGTCACATTGGAGACCATGATCCTCCCAATG +
Preference number: 5 (lower is better)
Translates to: SWKVESIARSASHAR*KPVLVTLETMILPM
Trigger: CATTGGGAGGATCATGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGCGGATCTTGCTATGGACTCCACCTTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 90 bp GACAGTTCTCTGCAGAGCTTAGTGGGGTGCCGTGGGATGTGGACGTaGCGCGAAGTTCTAAGTGGATCTCAAGGCCACGTGCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: DSSLQSLVGCRGMWT*REVLSGSQGHVLPT
Trigger: AGTGGGAAGCACGTGGCCTTGAGATCCACTTAGAACTTCGCGCCACGTCCACATCCCACGGCACCCCACTAAGCTCTGCAGAGAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466434.5
CDS CCA 90 bp TACTCAGTGAGACCTCGTCTCTTCCCACTCCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTCCTGGTGACAGACGCACCAGTACGA +
Preference number: 5 (lower is better)
Translates to: YSVRPRLFPLQVQLP*RRGWSFLVTDAPVR
Trigger: TCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGAGACGAGGTCTCACTGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CAA 90 bp CACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAACGAGCCCTCCAGGTTaGCGCACAGTTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HFGTSQTPLVGRSSRPRETSPPG*RTVPFQ
Trigger: CTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGT...TTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GCCCATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: AHGKPGVLHGELEPHDHTSNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...AGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCGATACTCCTGGCTGCTaGCGTTGCGAAAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: TYRTACLFGTDGGCCLPFDTPGC*RCERIL
Trigger: CAGAATCCTTTCGCAACGCAAGCAGCCAGGAGTATC...GAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGATGGGGTCCCGGGCGTaGCTAGACGGGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLMGSRA*LDGVAQ
Trigger: CTGGGCAACCCCGTCTAGCAACGCCCGGGACCCCAT...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCACAGCGGGACATGACTaGGGAAGAACCAGAGATGCG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFTAGHD*GRTRDA
Trigger: CGCATCTCTGGTTCTTCCCAAGTCATGTCCCGCTGT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS GCA 90 bp CTCACAGGGCTGTCACGGCTGAGATCCAACTCCTGCACAGATTCCTaGTGTGAATCTCCTGAGATGTCACCACAGGCGGGGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LTGLSRLRSNSCTDS*CESPEMSPQAGVFR
Trigger: TCTGAAGACCCCCGCCTGTGGTGACATCTCAGGAGATTCACAGCAGGAATCTGTGCAGGAGTTGGATCTCAGCCGTGACAGCCCTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS CCA 90 bp TGTATGAAGGTGTCGCCTCTGATCACCTCCAGCAGAGGCACGGTCTaGAAGGCGGTGAGAAATGCAGCTGACACCTCCTGGACATCCACA +
Preference number: 5 (lower is better)
Translates to: CMKVSPLITSSRGTV*KAVRNAADTSWTST
Trigger: TGTGGATGTCCAGGAGGTGTCAGCTGCATTTCTCACCGCCTTCCAGACCGTGCCTCTGCTGGAGGTGATCAGAGGCGACACCTTCATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 90 bp TACAACGAGGACTCGGGGATGGATTCCTGCTGCAGGAAGCGCTTCTaGATGGCGACAACCACCTTCTCGATCTCACAGAGCACCCTGACT +
Preference number: 5 (lower is better)
Translates to: YNEDSGMDSCCRKRF*MATTTFSISQSTLT
Trigger: AGTCAGGGTGCTCTGTGAGATCGAGAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS-3UTR CAA 90 bp ACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACACCAGTATGGTGACGTaGTACCAGGAGCCCACAGGG +
Preference number: 5 (lower is better)
Translates to: TLPAWRDTICILSFPLRYTSMVT*YQEPTG
Trigger: CCCTGTGGGCTCCTGGTACAACGTCACCATACTGGT...GTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GTGACTTCAAATACCTGGGCATACGACGAGGCCCTTACTCAGGCCCCCAACATCGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: VTSNTWAYDEALTQAPNIEPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...GATGTTGGGGGCCTGAGTAAGGGCCTCGTCGTATGCCCAGGTATTTGAAGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR CAA 90 bp GCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: AFSASHFGTSQTPLVGRSEPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...GCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACGGTGGAGGCCATTGGTaGCAGGGCGCTGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: LERHDLHSQLPTSVQVRHGGGHW*QGAGDQ
Trigger: TTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACC...GTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000491559.5
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGCTTGAGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SLSLTTTLPAWRDTICILTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...GAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCTCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp ATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCCTCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: MGNPGSCTVSLSLTTTLPSNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...GGGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SLTTTLPAWRDTICILSFSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...GAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SRPHFPPGETRSAFSASHSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...GTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCATCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: LTTTLPAWRDTICILSFPSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...TGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: LPAWRDTICILSFPLRYKSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...CTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCACGCCTTTTCCTGTGTaGTTCCTGTCATACCCGACC +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFTPFPV*FLSYPT
Trigger: GGTCGGGTATGACAGGAACAACACAGGAAAAGGCGT...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTCCTGGCTGCTTGCGTaGCGAAAGGATTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFSWLLA*RKDSEY
Trigger: GTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGA...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGACATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCAGATACTCCTGGCTGCTaGCGTTGCGAAAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: GHDLGRTRDAFLASPACPDTPGC*RCERIL
Trigger: CAGAATCCTTTCGCAACGCAAGCAGCCAGGAGTATC...TGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTGTGGCCCAGGTTTCATaGCCAGGAGAGTCACCTTCA +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGVAQVS*PGESPS
Trigger: TGAAGGTGACTCTCCTGGCAATGAAACCTGGGCCAC...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGACATGACTTGGGAAGAACCAGAGATGCGTTTCTGGCCTCCCCAGCGTGCCCAGGCACAGGGCAGCTGTaGTTAATGAAGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GHDLGRTRDAFLASPACPGTGQL*LMKLKV
Trigger: CACCTTCAGCTTCATTAACAACAGCTGCCCTGTGCC...TGGGCACGCTGGGGAGGCCAGAAACGCATCTCTGGTTCTTCCCAAGTCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGGCACAGGGCAGCTGTaGTTAATGAAGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFGTGQL*LMKLKV
Trigger: CACCTTCAGCTTCATTAACAACAGCTGCCCTGTGCC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCCGTTCTCAATCACGTaGGTGTATGTGTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLPFSIT*VYVLGT
Trigger: TGTGCCCAACACATACACCAACGTGATTGAGAACGG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGTGGGCCTTATTGGAGTaGCCGTTCTCAATCACGTTG +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLWALLE*PFSITL
Trigger: CAACGTGATTGAGAACGGCAACTCCAATAAGGCCCA...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTTTGAACTGGGCCTTATaGGAGTTGCCGTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPLNWAL*ELPFSI
Trigger: GATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAA...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTGAAAAGATCCTCAGCTaGAACTGGGCCTTATTGGAG +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPEKILS*NWALLE
Trigger: CTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTC...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTTTAATCGAGTGCCTTTaGAGTCGCTGTCGTGTAAAT +
Preference number: 5 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCLIECL*SRCRVN
Trigger: ATTTACACGACAGCGACTCAAAAGGCACTCGATTAA...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AAAACTGTCACTGGTGACGTTGAGGACCACGTAGTCACTGACTGGAGGACAATCGGTGGAGGCCATTGGTaGCAGGGCGCTGGTGACCTG +
Preference number: 5 (lower is better)
Translates to: KTVTGDVEDHVVTDWRTIGGGHW*QGAGDL
Trigger: CAGGTCACCAGCGCCCTGCAACCAATGGCCTCCACC...GATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS-3UTR CAA 90 bp GACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGACTGGAGGACAATCTaGCACCTGGACGCTGATCAC +
Preference number: 5 (lower is better)
Translates to: DHTSRLERHDLHSQLPTSDWRTI*HLDADH
Trigger: GTGATCAGCGTCCAGGTGCAAGATTGTCCTCCAGTC...CGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS TCA 90 bp ATCCAGAGGCAGGCTAGCTCTGCAAGCTCACAGGGCTGTCACGGCTaGGATCCAACTCCTGCACAGATTCCTGCTGTGAATCTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: IQRQASSASSQGCHG*DPTPAQIPAVNLLR
Trigger: TCTCAGGAGATTCACAGCAGGAATCTGTGCAGGAGTTGGATCTCAGCCGTGACAGCCCTGTGAGCTTGCAGAGCTAGCCTGCCTCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS-3UTR CAA 90 bp GAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGACGAGCCCTCCAGGTTaGCGCACAGTTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EKSWYSTLLRLSNFSVRLTSPPG*RTVPFQ
Trigger: CTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGT...CAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CAA 90 bp CAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTGTCTTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: QVRHHWWEGALDLVKQLSSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...AGACAACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SQLPTSVQVRHHWWEGALSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...GAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: AWRDTICILSFPLRYKSDSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...GTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGGACCGTTACCCCTGTaGCCGCAGACAGTCCACCGC +
Preference number: 5 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLGPLPL*PQTVHR
Trigger: GCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTCC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTACGCCTTTTCCTGTGTaGTTCCTGTCATACCCGACC +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGTPFPV*FLSYPT
Trigger: GGTCGGGTATGACAGGAACAACACAGGAAAAGGCGT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGGGCCTTATTGGAGTaGCCGTTCTCAATCACGTTG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFWALLE*PFSITL
Trigger: CAACGTGATTGAGAACGGCAACTCCAATAAGGCCCA...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTCGAAAGTTATTGCAATaGATTTTGCACGTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPRKLLQ*ILHVAP
Trigger: CGGAGCCACGTGCAAAATCAATTGCAATAACTTTCG...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCAGCAACCGAAAGTTATaGCAATTGATTTTGCACGTG +
Preference number: 5 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCSNRKL*QLILHV
Trigger: CACGTGCAAAATCAATTGCAATAACTTTCGGTTGCT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS GCA 90 bp TGCTGTCCTCACTTTCAGATGAGCTCTGGCACCTTCTTTCCCACATaGTTTGGCCATGATCTCAACCAGGTGCAAGACCCCAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CCPHFQMSSGTFFPT*FGHDLNQVQDPRLQ
Trigger: CTGGAGCCTGGGGTCTTGCACCTGGTTGAGATCATGGCCAAAGCATGTGGGAAAGAAGGTGCCAGAGCTCATCTGAAAGTGAGGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 90 bp AATTGGGCAGTCCCCTTAACAAGCAAGGAATGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCCTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: NWAVPLTSKECRRRM*FRSLGSTCWSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGCTTGTTAAGGGGACTGCCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLTCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: RHDLHSQLPTSVQVRHHWEPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...CCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GCTCTCGACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: ALDLVKQLSRKVLVLHTAEPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...AGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGGTGGAGGCCATTGGTaGCAGGGCGCTGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLGGGHW*QGAGDQ
Trigger: TTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTACACTCATTGACATCTaGCACCTGGACGCTGATCAC +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGTLIDI*HLDADH
Trigger: GTGATCAGCGTCCAGGTGCAAGATGTCAATGAGTGT...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCTGAGGGCTGGTGTAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 5 (lower is better)
Translates to: RVTDAKGGQAQEGSEGWCNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...ACACCAGCCCTCAGAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GACTGGAGGACAATCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTGGCTGGGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: DWRTIFPLQVQLPWRRGWDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...CCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGATTGTCCTCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS-3UTR CAA 90 bp CTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: LEKSWYSTLLRLSNFSVRSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACCCTGGAAGCTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: LFSNLLCSRKGQDSHPGSSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...GCTTCCAGGGTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CAA 90 bp GTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAACAGGGTGGGGCTGGTGCCTaGCACAAAGGCAGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: VMLFQERQVKAPQLTSEQGGAGA*HKGSLG
Trigger: ACCAAGGCTGCCTTTGTGCAAGGCACCAGCCCCACC...CTGTTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGGTGGGGCTGGTGCCTaGCACAAAGGCAGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLGGAGA*HKGSLG
Trigger: ACCAAGGCTGCCTTTGTGCAAGGCACCAGCCCCACC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGTTGCTGTGGCTCACGTaGCAGGAGGGGTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLLLWLT*QEGWLR
Trigger: CCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAA...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTCGAAAAGATCCTCAGCTaGAACTGGGCCTTATTGGAG +
Preference number: 5 (lower is better)
Translates to: LYLPKGDGRQGRASPGGFEKILS*NWALLE
Trigger: CTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTC...GAACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGCGAAAGTTATTGCAATaGATTTTGCACGTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLRKLLQ*ILHVAP
Trigger: CGGAGCCACGTGCAAAATCAATTGCAATAACTTTCG...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GGCTCCTCTAGGACCTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCAGAGGTTTCACTATTTaGCAGCAACCGAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: GSSRTYRTACLFGTDGGCRGFTI*QQPKVI
Trigger: AATAACTTTCGGTTGCTGCAAAATAGTGAAACCTCT...GCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAGGTCCTAGAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGTGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACATGGAAACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: LCPGAPEQLHTPVNPDMETCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...TTCCATGTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: CLEKSWYSTLLRLSNFSVEPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...GACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCAACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GETRSAFSASHFGTSQTPTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...TGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ETRSAFSASHFGTSQTPLTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...CAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACTCCACACTGCTGCGGTaGAGTAACTTCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: LERHDLHSQLPTSVQVRHSTLLR*SNFSVR
Trigger: CCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGA...GTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: SRPHFPPGETRSAFSASHDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...GTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp AGCCTCACGACCACACTTCCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: SLTTTLPAWRDTICILSFDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...GAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGACACTCGTCCCAGTCTaGCACGCGTGTCCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRTLVPV*HACPLP
Trigger: CGGCAGGGGACACGCGTGCAAGACTGGGACGAGTGT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGTCCGTCAGGACCACCTaGAGGTTGCTTTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPESVRTT*RLLFCL
Trigger: CAGGCAGAAAAGCAACCTCAAGGTGGTCCTGACGGA...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTTGAACTGGGCCTTATaGGAGTTGCCGTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGLNWAL*ELPFSI
Trigger: GATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAA...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTCTATATTTGCCAAAGGGTGACGGACGCCAAGGGAGGGCAAGCCCAGGAGGGTTTATTGCAATTGATTTaGCACGTGGCTCCGGGGGAT +
Preference number: 5 (lower is better)
Translates to: FYICQRVTDAKGGQAQEGLLQLI*HVAPGD
Trigger: ATCCCCCGGAGCCACGTGCAAAATCAATTGCAATAA...ACCCTCCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTAGCAACCGAAAGTTATaGCAATTGATTTTGCACGTG +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPSNRKL*QLILHV
Trigger: CACGTGCAAAATCAATTGCAATAACTTTCGGTTGCT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGTTTCTTACTGGCCAATaGGGCAGTCCCCTTAACAAG +
Preference number: 5 (lower is better)
Translates to: LSFPLRYKSDTTGGKELSFLTGQ*GSPLNK
Trigger: CTTGTTAAGGGGACTGCCCAATTGGCCAGTAAGAAA...CGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS GCA 90 bp AAGGAATGCAGAAGGCGCATGTGGTTCAGGAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCCATTTTCACCAGTATGGTGACGTTG +
Preference number: 5 (lower is better)
Translates to: KECRRRMWFRSLGST*WSSLKSIFTSMVTL
Trigger: CAACGTCACCATACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS GCA 90 bp ATGGCCTCAAGAAGGAACTCAGCTCAGCCATTGAGAAATGGGAAATaGCCACCAGTCCACATGAGTCCTCCGTCCAAGGGCTGCGATTTT +
Preference number: 5 (lower is better)
Translates to: MASRRNSAQPLRNGK*PPVHMSPPSKGCDF
Trigger: AAAATCGCAGCCCTTGGACGGAGGACTCATGTGGACTGGTGGGCATTTCCCATTTCTCAATGGCTGAGCTGAGTTCCTTCTTGAGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS-3UTR CAA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLEPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CGAGCCTGTGATGGACCATCCCAAATGGAGCATCCAGCACAACCAGCCACATTTACACTCATTGACATCTaGCACCTGGACGCTGATCAC +
Preference number: 5 (lower is better)
Translates to: RACDGPSQMEHPAQPATFTLIDI*HLDADH
Trigger: GTGATCAGCGTCCAGGTGCAAGATGTCAATGAGTGT...AAATGTGGCTGGTTGTGCTGGATGCTCCATTTGGGATGGTCCATCACAGGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp ACTGACTGGAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: TDWRTICFPTFCAHERDRTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...CCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTCCAGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CAA 90 bp CCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCATCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: PAWRDTICILSFPLRYKSSNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...TGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTGGCTCTGTGTCCTGGCGCTCCTGAGCAACTCCATACCCCGGTAAACCCGGACAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 5 (lower is better)
Translates to: LALCPGAPEQLHTPVNPDNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...GTCCGGGTTTACCGGGGTATGGAGTTGCTCAGGAGCGCCAGGACACAGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CATGGGAAACCCGGGGTCCTGCACGGTGAGCTTGAGCCTCACGACCACACTTCCAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 5 (lower is better)
Translates to: HGKPGVLHGELEPHDHTSNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...GGAAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGACCCCGGGTTTCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTCTGGAACACTGTGCTaGCCAACAGGGGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLSGTLC*PTGAGV
Trigger: TACTCCAGCCCCTGTTGGCAAGCACAGTGTTCCAGA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AAAGCTCCTCAGCTGACATCAGAACAGCGGGACATGACTTGGGAAGAACCAGAGTCCTGGCTGCTTGCGTaGCGAAAGGATTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: KAPQLTSEQRDMTWEEPESWLLA*RKDSEY
Trigger: GTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGA...CTCTGGTTCTTCCCAAGTCATGTCCCGCTGTTCTGATGTCAGCTGAGGAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGTTGCTGTGGCTCACGTaGCAGGAGGGGTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRLLWLT*QEGWLR
Trigger: CCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAA...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAAGCAACCGAAAGTTATaGCAATTGATTTTGCACGTG +
Preference number: 5 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQSNRKL*QLILHV
Trigger: CACGTGCAAAATCAATTGCAATAACTTTCGGTTGCT...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp CTGAGGTTCTGGAGGCAGCTTGACTCACGGCGACCTTCCTGTCAGCCTGCGCCTAATAAAAGCAATACCTaGGTACACAGGAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LRFWRQLDSRRPSCQPAPNKSNT*VHRRKV
Trigger: GACTTTTCTCCTGTGTACCAAGGTATTGCTTTTATT...AGGCGCAGGCTGACAGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS CCA 90 bp CTCATAGAAACACTCATTGACATCAAGGAATGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCCTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LIETLIDIKECRRRM*FRSLGSTCWSSLKS
Trigger: GGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGATGTCAATGAGTGTTTCTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485357.1
CDS-3UTR CAA 90 bp CCCGCCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: PAWRDTICILSFPLRYKSTCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...TGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGAACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: SASHFGTSQTPLVGRSSRTCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...TCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CAAGTCAGACACCACTGGTGGGAAGGAGCTCTCGACCTCGTGAAGCAGTTGTCTACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: QVRHHWWEGALDLVKQLSTCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...AGACAACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACACACTCATTGACATCTaGCACCTGGACGCTGATCAC +
Preference number: 5 (lower is better)
Translates to: LERHDLHSQLPTSVQVRHTLIDI*HLDADH
Trigger: GTGATCAGCGTCCAGGTGCAAGATGTCAATGAGTGT...GTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
CDS-3UTR CAA 90 bp GAGGACAATCTGTTTTCCAACCTTCTGTGCTCACGAAAGGGACAGGATTCTCACACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: EDNLFSNLLCSRKGQDSHTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...GTGAGAATCCTGTCCCTTTCGTGAGCACAGAAGGTTGGAAAACAGATTGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466434.5
ENST00000485357.1
ENST00000491559.5
CDS-3UTR CAA 90 bp CTACAGGACGGCCTGCCTCTTCGGGACAGACGGTGGCTGCTGTCTTCCTTTCTGAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 5 (lower is better)
Translates to: LQDGLPLRDRRWLLSSFLNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...CAGAAAGGAAGACAGCAGCCACCGTCTGTCCCGAAGAGGCAGGCCGTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGACCACGATGCTGCCGTaGGTGACGCTGACGACTTCC +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRTTMLP*VTLTTS
Trigger: GGAAGTCGTCAGCGTCACCAACGGCAGCATCGTGGT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAATGCACAAAGGCAGCCTaGGTCCCTGCTGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: CVMLFQERQVKAPQLTSECTKAA*VPAVVR
Trigger: TCTCACCACAGCAGGGACCAAGGCTGCCTTTGTGCA...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGGGCACAGGGCAGCTGTaGTTAATGAAGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLGTGQL*LMKLKV
Trigger: CACCTTCAGCTTCATTAACAACAGCTGCCCTGTGCC...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ACACAGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAAGAGGTTTCACTATTTaGCAGCAACCGAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: TQHRPSLDAQRACDGPSQRGFTI*QQPKVI
Trigger: AATAACTTTCGGTTGCTGCAAAATAGTGAAACCTCT...TTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp AGCACCGGCCCTCGTTGGATGCTCAGCGAGCCTGTGATGGACCATCCCAAATGGAATAAAAGCAATACCTaGGTACACAGGAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: STGPRWMLSEPVMDHPKWNKSNT*VHRRKV
Trigger: GACTTTTCTCCTGTGTACCAAGGTATTGCTTTTATT...CCATTTGGGATGGTCCATCACAGGCTCGCTGAGCATCCAACGAGGGCCGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGTCCCTCTCTGGAGCTaGGGGTGCAGGGGCCATGCA +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVVPLWS*GCRGHA
Trigger: TGCATGGCCCCTGCACCCCAAGCTCCAGAGAGGGAC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGTGGGAAGGAGCTCACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: ILSFPLRYKSDTTGGKELTCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...GAGCTCCTTCCCACCAGTGGTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGAGCCTGGGGTCCACTaGCTGGAGTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHREPGVH*LEFLEV
Trigger: GACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACACTCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: LERHDLHSQLPTSVQVRHSNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...GTGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: EKSWYSTLLRLSNFSVRLDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...CAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp CCTGGAGAGACACGATCTGCATTCTCAGCTTCCCACTTCGGTACAAGTCAGACAGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: PGETRSAFSASHFGTSQTDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...TGTCTGACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGTCCTGGCTGCTTGCGTaGCGAAAGGATTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLSWLLA*RKDSEY
Trigger: GTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGA...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGTGCACAAAGGCAGCCTaGGTCCCTGCTGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRCTKAA*VPAVVR
Trigger: TCTCACCACAGCAGGGACCAAGGCTGCCTTTGTGCA...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTAGCACGTGTGTGCCATaGCTGTGGCTCACGTTGCAG +
Preference number: 5 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLSTCVP*LWLTLQ
Trigger: CTGCAACGTGAGCCACAGCAATGGCACACACGTGCT...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGAGCACGTGTGTGCCATaGCTGTGGCTCACGTTGCAG +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRSTCVP*LWLTLQ
Trigger: CTGCAACGTGAGCCACAGCAATGGCACACACGTGCT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS TCA 90 bp GGCAGAAGGCCCTCAGGCCATTTGCCTTTCGCCATGATGCTGGGTTaGTTGTTGACAGCAAAACAGGTTTACTGCAGAACATGGATAAGA +
Preference number: 5 (lower is better)
Translates to: GRRPSGHLPFAMMLG*LLTAKQVYCRTWIR
Trigger: TCTTATCCATGTTCTGCAGTAAACCTGTTTTGCTGTCAACAATCAACCCAGCATCATGGCGAAAGGCAAATGGCCTGAGGGCCTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400423.6
ENST00000484174.5
CDS GCA 90 bp TTAGCATGTGGACGTATTTCCTTCCAGCCTTTTAAAATGCAGGCATaGTCTGAGAGCATAGCTTGCCTCTGCCACCAACTAGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: LACGRISFQPFKMQA*SESIACLCHQLAPC
Trigger: GCATGGAGCTAGTTGGTGGCAGAGGCAAGCTATGCTCTCAGAGCATGCCTGCATTTTAAAAGGCTGGAAGGAAATACGTCCACATGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400423.6
ENST00000484174.5
CDS-3UTR CAA 90 bp GACCTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: DLVKQLSRKVLVLHTAAVTCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...AACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGACCTGGGCATTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRTWALV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAATGCCCAGGT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLSNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: TLLRLSNFSVRLWFTIFISCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...AATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp ATGGAGCATCCAGCACAACCAGCCACATTTCAGTGTCTTATGCGATTGATTCTATCTGGAACACTGTGCTaGCCAACAGGGGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: MEHPAQPATFQCLMRLILSGTLC*PTGAGV
Trigger: TACTCCAGCCCCTGTTGGCAAGCACAGTGTTCCAGA...TAGAATCAATCGCATAAGACACTGAAATGTGGCTGGTTGTGCTGGATGCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGTGGCCCAGGTTTCATaGCCAGGAGAGTCACCTTCA +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRVAQVS*PGESPS
Trigger: TGAAGGTGACTCTCCTGGCAATGAAACCTGGGCCAC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGACGTTGGTGTATGTGTaGGGCACAGGGCAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRTLVYV*GTGQLL
Trigger: CAACAGCTGCCCTGTGCCCAACACATACACCAACGT...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTTATTGCAATTGATTTaGCACGTGGCTCCGGGGGAT +
Preference number: 5 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLLLQLI*HVAPGD
Trigger: ATCCCCCGGAGCCACGTGCAAAATCAATTGCAATAA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp AGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGTAACTTCTCCAGAACGTACTTGGTTTaGATGGTCAGCGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SCLEKSWYSTLLRLSNFSRTYLV*MVSVVE
Trigger: CTCCACCACGCTGACCATCAAAACCAAGTACGTTCT...GGAGAAGTTACTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS CCA 90 bp CCCCGCACCATCCTGAAGAATAGTTCTAGGAAATCTCGATACTCCTaGCTGCTTGCGTTGCGAAAGGATTCTGAGTACCTGACATTTTTG +
Preference number: 5 (lower is better)
Translates to: PRTILKNSSRKSRYS*LLALRKDSEYLTFL
Trigger: CAAAAATGTCAGGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGAGTATCGAGATTTCCTAGAACTATTCTTCAGGATGGTGCGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAACGAGCCCTCCAGGTTaGCGCACAGTTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVTSPPG*RTVPFQ
Trigger: CTGGAAGGGAACTGTGCGCAAACCTGGAGGGCTCGT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAACCACGATGCTGCCGTaGGTGACGCTGACGACTTCC +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVTTMLP*VTLTTS
Trigger: GGAAGTCGTCAGCGTCACCAACGGCAGCATCGTGGT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGGAAAAGATCCTCAGCTaGAACTGGGCCTTATTGGAG +
Preference number: 5 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLEKILS*NWALLE
Trigger: CTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTC...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGGTTCTGGAGGCAGCTaGACTCACGGCGACCTTCCT +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVGSGGS*THGDLP
Trigger: AGGAAGGTCGCCGTGAGTCAAGCTGCCTCCAGAACC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAATCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: CVMLFQERQVKAPQLTSESNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp TGTGTCATGCTCTTCCAAGAAAGGCAAGTGAAAGCTCCTCAGCTGACATCAGAAGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: CVMLFQERQVKAPQLTSEDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...TTCTGATGTCAGCTGAGGAGCTTTCACTTGCCTTTCTTGGAAGAGCATGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGCCGTTCTCAATCACGTaGGTGTATGTGTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRPFSIT*VYVLGT
Trigger: TGTGCCCAACACATACACCAACGTGATTGAGAACGG...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TCATCGGCTCCTCTGGTTTCTCATTGTGTAATGGGTAAATCACACCTCCCACTGCGAAAGTTATTGCAATaGATTTTGCACGTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: SSAPLVSHCVMGKSHLPLRKLLQ*ILHVAP
Trigger: CGGAGCCACGTGCAAAATCAATTGCAATAACTTTCG...CAGTGGGAGGTGTGATTTACCCATTACACAATGAGAAACCAGAGGAGCCGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TCTAAGACTGACCTATTTTCGAAAGAGCATCAAGAGCGCGGTCGGGTCTCTCTGTTAATCGAGTGCCTTTaGAGTCGCTGTCGTGTAAAT +
Preference number: 5 (lower is better)
Translates to: SKTDLFSKEHQERGRVSLLIECL*SRCRVN
Trigger: ATTTACACGACAGCGACTCAAAAGGCACTCGATTAA...CAGAGAGACCCGACCGCGCTCTTGATGCTCTTTCGAAAATAGGTCAGTCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS TCA 90 bp TTATTGCAATTCTTAGAAGCACTAGGTATCATGGCAAGGCAGTGCTaGCGCGACAGCCGGTTGAATATTATGGCCTCAAGAAGGAACTCA +
Preference number: 5 (lower is better)
Translates to: LLQFLEALGIMARQC*RDSRLNIMASRRNS
Trigger: TGAGTTCCTTCTTGAGGCCATAATATTCAACCGGCTGTCGCGTCAGCACTGCCTTGCCATGATACCTAGTGCTTCTAAGAATTGCAATAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS-3UTR CAA 90 bp CTCGTGAAGCAGTTGTCTAGAAAAGTCCTGGTACTCCACACTGCTGCGGTTGAGAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 5 (lower is better)
Translates to: LVKQLSRKVLVLHTAAVENFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...CTCAACCGCAGCAGTGTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGGACCTCGTGAAGCAGTaGTCTAGAAAAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRDLVKQ*SRKVLV
Trigger: TACCAGGACTTTTCTAGACAACTGCTTCACGAGGTC...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp CAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAATACCTGGGCATTGGTTTTTCCTGCACGGTGAGCTaGAGCCTCACGACCACACTT +
Preference number: 5 (lower is better)
Translates to: QVVVYNLYCDFKYLGIGFSCTVS*SLTTTL
Trigger: AAGTGTGGTCGTGAGGCTCAAGCTCACCGTGCAGGA...AAAACCAATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTTTATTGCAATTGATTTaGCACGTGGCTCCGGGGGAT +
Preference number: 5 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLLLQLI*HVAPGD
Trigger: ATCCCCCGGAGCCACGTGCAAAATCAATTGCAATAA...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ATCACACCTCCCACTGTGGTCGGATTATATGAAGAAACGGCTGTGAAAATGCTTACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: ITPPTVVGLYEETAVKMLTCWSS*KSIFTS
Trigger: ACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT...AAGCATTTTCACAGCCGTTTCTTCATATAATCCGACCACAGTGGGAGGTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp ACACTGCTGCGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTTCAAATACCTGGGCATaGGTTTTGATGGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: TLLRLSNFSVRLWFTIFISNTWA*VLMVSV
Trigger: CACGCTGACCATCAAAACCAATGCCCAGGTATTTGA...AATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAGATACTCCTGGCTGCTaGCGTTGCGAAAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVDTPGC*RCERIL
Trigger: CAGAATCCTTTCGCAACGCAAGCAGCCAGGAGTATC...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACCGTTCTCAATCACGTaGGTGTATGTGTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVPFSIT*VYVLGT
Trigger: TGTGCCCAACACATACACCAACGTGATTGAGAACGG...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTTACAATCTTTATTGTGACTTCAAATACCTGGGCATACGACGAGGCCCTTACTTTCTCAAGAACGTACTaGGTTTTGATGGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: FTIFIVTSNTWAYDEALTFSRTY*VLMVSV
Trigger: CACGCTGACCATCAAAACCAAGTACGTTCTTGAGAA...AGTAAGGGCCTCGTCGTATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR CAA 90 bp GAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTACACAGGCAGTGTCTTATGCGATaGATTCTACTTGATCAGAAT +
Preference number: 5 (lower is better)
Translates to: ECLLSRCRVNKSNTLVHRQCLMR*ILLDQN
Trigger: ATTCTGATCAAGTAGAATCAATCGCATAAGACACTG...CCTGTGTACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400424.6
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTATTAATCGAGTGCCTTTaGAGTCGCTGTCGTGTAAAT +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVLIECL*SRCRVN
Trigger: ATTTACACGACAGCGACTCAAAAGGCACTCGATTAA...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTTACAATCTTTATTGTGACTTCAAATACCTGGGCATACGACGAGGCCCTTACTAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 5 (lower is better)
Translates to: FTIFIVTSNTWAYDEALTNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...AGTAAGGGCCTCGTCGTATGCCCAGGTATTTGAAGTCACAATAAAGATTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS-3UTR CAA 90 bp CGGTTGAGTAACTTCTCCGTCAGGTTGTGGTTTACAATCTTTATTGTGACTTCAAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 5 (lower is better)
Translates to: RLSNFSVRLWFTIFIVTSNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...TGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400421.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAAACTTCTCCGTCAGGTaGTGGTTTACAATCTTTATT +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVNFSVR*WFTIFI
Trigger: AATAAAGATTGTAAACCACAACCTGACGGAGAAGTT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS-3UTR CAA 90 bp TTAATCGAGTGCCTTTTGAGTCGCTGTCGTGTAAATAAAAGCAATACCTTGGTAAGAGGTTTCACTATTTaGCAGCAACCGAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: LIECLLSRCRVNKSNTLVRGFTI*QQPKVI
Trigger: AATAACTTTCGGTTGCTGCAAAATAGTGAAACCTCT...TACCAAGGTATTGCTTTTATTTACACGACAGCGACTCAAAAGGCACTCGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408989.6
CDS CCA 72 bp GCCGTGGCAGGCCCAGTAGCAGCCGCGACACTGTGGTaGAGGCGTTCCCAGGGGCTGAGTGCAGGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: AVAGPVAAATLW*RRSQGLSAGGG
Trigger: TCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGCTACTGGGCCTGCCACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS CCA 72 bp GTGGCCGTGGCAGGCCCAGTAGCAGCCGCGACACTGTaGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: VAVAGPVAAATL*WRRSQGLSAGG
Trigger: ACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGCTACTGGGCCTGCCACGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS CCA 72 bp GTGGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTGGTaGACGGTGGAGGCCATTGGTTGCAGGGCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: VVEAFPGAECRW*TVEAIGCRALV
Trigger: CACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS CAA 90 bp CGAGGGCTGCTGTTCCCGTGCCAAGACCTGGGACCGTTACCCCTGTaGCCGCAGACAGTCCACCGCCCATGGGGCTCACCAGGTCACCCT +
Preference number: 6 (lower is better)
Translates to: RGLLFPCQDLGPLPL*PQTVHRPWGSPGHP
Trigger: AGGGTGACCTGGTGAGCCCCATGGGCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTCCCAGGTCTTGGCACGGGAACAGCAGCCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp CGCGACACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTaGAGGTGGTGGACGGTGGAGGCCATTGGTTGCAGG +
Preference number: 6 (lower is better)
Translates to: RDTVVEAFPGAE*RWWTVEAIGCR
Trigger: CCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS GCA 72 bp GGGGCTGGTGCCTTGCACAAAGGCAGCCTTGGTCCCTaGTGTGGTGAGAGGCCTCTCTGGGCTGGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: GAGALHKGSLGP*CGERPLWAGGP
Trigger: TGGGCCACCAGCCCAGAGAGGCCTCTCACCACAGCAGGGACCAAGGCTGCCTTTGTGCAAGGCACCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp CACACTCGCTCCAGCCGGCCTCCAGGAGCACGTGTGTaGCATTGCTGTGGCTCACGTTGCAGGAGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: HTRSSRPPGARV*HCCGSRCRRGG
Trigger: GCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCACACACGTGCTCCTGGAGGCCGGCTGGAGCGAGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp ACTGTGGTGGAGGCGTTCCCAGGGGCTGAGTGCAGGTaGTGGACGGTGGAGGCCATTGGTTGCAGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: TVVEAFPGAECR*WTVEAIGCRAL
Trigger: CAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000491559.5
ENST00000497243.5
CDS CCA 72 bp GTTTCCCGGGTGGAACGGGTGGCATGCCACAGGAAGTaGCCGGTGGGGTCCTCAGTAGGGGAAGGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: VSRVERVACHRK*PVGSSVGEGQE
Trigger: CTCCTGGCCTTCCCCTACTGAGGACCCCACCGGCCACTTCCTGTGGCATGCCACCCGTTCCACCCGGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS GCA 72 bp TGTTCCCGTGCCAAGACCTGGGACCGTTACCCCTGTTaGCGCAGACAGTCCACCGCCCATGGGGCTCACCAG +
Preference number: 6 (lower is better)
Translates to: CSRAKTWDRYPC*RRQSTAHGAHQ
Trigger: CTGGTGAGCCCCATGGGCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTCCCAGGTCTTGGCACGGGAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp GTCCAGCCCAAGGGACCCAGGCTGCAAGCCCAACCCTaGGCAGAAGGCCCTCAGGCCATTTGCCTTTCGCCA +
Preference number: 6 (lower is better)
Translates to: VQPKGPRLQAQP*AEGPQAICLSP
Trigger: TGGCGAAAGGCAAATGGCCTGAGGGCCTTCTGCCCAGGGTTGGGCTTGCAGCCTGGGTCCCTTGGGCTGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400423.6
ENST00000484174.5
CDS CAA 72 bp CTGTTCCCGTGCCAAGACCTGGGACCGTTACCCCTGTaGCCGCAGACAGTCCACCGCCCATGGGGCTCACCA +
Preference number: 6 (lower is better)
Translates to: LFPCQDLGPLPL*PQTVHRPWGSP
Trigger: TGGTGAGCCCCATGGGCGGTGGACTGTCTGCGGCAACAGGGGTAACGGTCCCAGGTCTTGGCACGGGAACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 90 bp GTCCCACACTCGCTCCAGCCGGCCTCCAGGAGCACGTGTGTGCCATaGCTGTGGCTCACGTTGCAGGAGGGGTGGCTGAGGTACAACGAG +
Preference number: 6 (lower is better)
Translates to: VPHSLQPASRSTCVP*LWLTLQEGWLRYNE
Trigger: CTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCACACACGTGCTCCTGGAGGCCGGCTGGAGCGAGTGTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp GCTGAGTGCAGGTGGTGGACGGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCAAGGAATGCAGAAGGCGC +
Preference number: 6 (lower is better)
Translates to: AECRWWTVEAIG*RALVTKECRRR
Trigger: GCGCCTTCTGCATTCCTTGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000491559.5
CDS GCA 72 bp GAAGGTGATGGGGTCCCGGGCGTTGCTAGACGGGGTTaGCCAGCACTCCGTCAGGACCACCTTGAGGTTGCT +
Preference number: 6 (lower is better)
Translates to: EGDGVPGVARRG*PALRQDHLEVA
Trigger: AGCAACCTCAAGGTGGTCCTGACGGAGTGCTGGGCAACCCCGTCTAGCAACGCCCGGGACCCCATCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 90 bp CAGCCGGCCTCCAGGAGCACGTGTGTGCCATTGCTGTGGCTCACGTaGCAGGAGGGGTGGCTGAGGTACAACGAGGACTCGGGGATGGAT +
Preference number: 6 (lower is better)
Translates to: QPASRSTCVPLLWLT*QEGWLRYNEDSGMD
Trigger: ATCCATCCCCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCACACACGTGCTCCTGGAGGCCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp CAGGGAAGTCGGGGGCTCCTCCCTCGCAGCTACAAGTaGAAGACCCGAGGGTGTTTCGACAGGATGTCCCCG +
Preference number: 6 (lower is better)
Translates to: QGSRGLLPRSYK*KTRGCFDRMSP
Trigger: CGGGGACATCCTGTCGAAACACCCTCGGGTCTTTCACTTGTAGCTGCGAGGGAGGAGCCCCCGACTTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000484174.5
CDS GCA 72 bp GACAACCACCTTCTCGATCTCACAGAGCACCCTGACTaGTCCGGTCAGGTTCAGCCGCTGGGGCAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: DNHLLDLTEHPD*SGQVQPLGQAL
Trigger: CAAGGCCTGCCCCAGCGGCTGAACCTGACCGGAGCAGTCAGGGTGCTCTGTGAGATCGAGAAGGTGGTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp GCTGAGTGCAGGTGGTGGACGGTGGAGGCCATTGGTTaGAGGGCGCTGGTGACCCAAGGTCACACAGCTGAT +
Preference number: 6 (lower is better)
Translates to: AECRWWTVEAIG*RALVTQGHTAD
Trigger: ATCAGCTGTGTGACCTTGGGTCACCAGCGCCCTGCAACCAATGGCCTCCACCGTCCACCACCTGCACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS GCA 72 bp TGCAGGCAGCCCCCGTCTGTCTCACCTACCAAGGAATaGAGAAGGCGCATGTGGTTCAGGAGCCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: CRQPPSVSPTKE*RRRMWFRSLGS
Trigger: GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGGTAGGTGAGACAGACGGGGGCTGCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS CCA 72 bp GGCGGGGGTCTTCAGAGCTGTGAGGGTGGAGGTCAATaGCAGGTCTACAGAACCGGAGGGTCCACTGTCCTC +
Preference number: 6 (lower is better)
Translates to: GGGLQSCEGGGQ*QVYRTGGSTVL
Trigger: GAGGACAGTGGACCCTCCGGTTCTGTAGACCTGCCATTGACCTCCACCCTCACAGCTCTGAAGACCCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 72 bp GGGCTCAGGATCTTCAGGTGGTGGATGATGCCCTCCTaGGACAGGTCGTTCCTCAGCGTGGTCCTCACCACG +
Preference number: 6 (lower is better)
Translates to: GLRIFRWWMMPS*DRSFLSVVLTT
Trigger: CGTGGTGAGGACCACGCTGAGGAACGACCTGTCCCAGGAGGGCATCATCCACCACCTGAAGATCCTGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 90 bp GGGCAGCTGTTGTTAATGAAGCTGAAGGTGATGGGGTCCCGGGCGTaGCTAGACGGGGTTGCCCAGCACTCCGTCAGGACCACCTTGAGG +
Preference number: 6 (lower is better)
Translates to: GQLLLMKLKVMGSRA*LDGVAQHSVRTTLR
Trigger: CCTCAAGGTGGTCCTGACGGAGTGCTGGGCAACCCCGTCTAGCAACGCCCGGGACCCCATCACCTTCAGCTTCATTAACAACAGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp CCAGGTGGAAGCCGGTGCTGGTCACATTGGAGACCATaGTCCTCCCAATGGAGACAGGAACACAGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: PGGSRCWSHWRP*SSQWRQEHRRG
Trigger: CCCCCGCCTGTGTTCCTGTCTCCATTGGGAGGATCATGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp GGGCTGCGATTTTGCACGTGGCTCCGGGGGATTCCATaGAGACGCGGAGTTTGCAGTGCAGGTAGACGATGG +
Preference number: 6 (lower is better)
Translates to: GLRFCTWLRGIP*RRGVCSAGRRW
Trigger: CCATCGTCTACCTGCACTGCAAACTCCGCGTCTGCATGGAATCCCCCGGAGCCACGTGCAAAATCGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS CCA 72 bp AGGGCGCTGGTGACCAAGGAATGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: RALVTKECRRRM*FRSLGSTCWSS
Trigger: GGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGGTCACCAGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000491559.5
CDS CCA 72 bp GTGTCGCCTCTGATCACCTCCAGCAGAGGCACGGTCTaGAAGGCGGTGAGAAATGCAGCTGACACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VSPLITSSRGTV*KAVRNAADTSW
Trigger: CCAGGAGGTGTCAGCTGCATTTCTCACCGCCTTCCAGACCGTGCCTCTGCTGGAGGTGATCAGAGGCGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp GTGCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGACAGACGCACCAGTACG +
Preference number: 6 (lower is better)
Translates to: VLPTPGSASVET*LELPGDRRTST
Trigger: CGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466434.5
CDS CCA 72 bp AAGGCCACGTGCTTCCCACTCCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTCCTGGTGACAGACGCA +
Preference number: 6 (lower is better)
Translates to: KATCFPLQVQLP*RRGWSFLVTDA
Trigger: TGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGCACGTGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466434.5
CDS CAA 72 bp TCCAGGAGCACGTGTGTGCCATTGCTGTGGCTCACGTaGCAGGAGGGGTGGCTGAGGTACAACGAGGACTCG +
Preference number: 6 (lower is better)
Translates to: SRSTCVPLLWLT*QEGWLRYNEDS
Trigger: CGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCACACACGTGCTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp TGGAGACAGGAACACAGGCGGGGGTCTTCAGAGCTGTaGGGGTGGAGGTCAATGGCAGGTCTACAGAACCGG +
Preference number: 6 (lower is better)
Translates to: WRQEHRRGSSEL*GWRSMAGLQNR
Trigger: CCGGTTCTGTAGACCTGCCATTGACCTCCACCCTCACAGCTCTGAAGACCCCCGCCTGTGTTCCTGTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp TGCCATTGCTGTGGCTCACGTTGCAGGAGGGGTGGCTaGGGTACAACGAGGACTCGGGGATGGATTCCTGCT +
Preference number: 6 (lower is better)
Translates to: CHCCGSRCRRGG*GTTRTRGWIPA
Trigger: AGCAGGAATCCATCCCCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp CTGAGATGTCACCACAGGCGGGGGTCTTCAGAGCTGTaGGGGTGGAGGTCAATGGCAGGTCTACAGAACCGG +
Preference number: 6 (lower is better)
Translates to: LRCHHRRGSSEL*GWRSMAGLQNR
Trigger: CCGGTTCTGTAGACCTGCCATTGACCTCCACCCTCACAGCTCTGAAGACCCCCGCCTGTGGTGACATCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS GCA 72 bp TCCACACACTCGTCCCAGTCTTGCACGCGTGTCCCCTaGCGGTCAATCTGGAACACTGTGCTTGCCAACAGG +
Preference number: 6 (lower is better)
Translates to: STHSSQSCTRVP*RSIWNTVLANR
Trigger: CCTGTTGGCAAGCACAGTGTTCCAGATTGACCGGCAGGGGACACGCGTGCAAGACTGGGACGAGTGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp TTCCTGTGTTGTTCCTGTCATACCCGACCACATTGCTaGCCCCTCTTCTGGGTGAGGGCTCTGGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: FLCCSCHTRPHC*PLFWVRALGSR
Trigger: CCTGGACCCCAGAGCCCTCACCCAGAAGAGGGGGCAGCAATGTGGTCGGGTATGACAGGAACAACACAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp CTGGAAGGTGGAGTCCATAGCAAGATCCGCCTCCCATaGCAGGTGGAAGCCGGTGCTGGTCACATTGGAGAC +
Preference number: 6 (lower is better)
Translates to: LEGGVHSKIRLP*QVEAGAGHIGD
Trigger: GTCTCCAATGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGCGGATCTTGCTATGGACTCCACCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS GCA 72 bp TGGCTGAGGTACAACGAGGACTCGGGGATGGATTCCTaGTGCAGGAAGCGCTTCTGGATGGCGACAACCACC +
Preference number: 6 (lower is better)
Translates to: WLRYNEDSGMDS*CRKRFWMATTT
Trigger: GGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGTTGTACCTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp TCCCAGTCTTGCACGCGTGTCCCCTGCCGGTCAATCTaGAACACTGTGCTTGCCAACAGGGGCTGGAGTATG +
Preference number: 6 (lower is better)
Translates to: SQSCTRVPCRSI*NTVLANRGWSM
Trigger: CATACTCCAGCCCCTGTTGGCAAGCACAGTGTTCCAGATTGACCGGCAGGGGACACGCGTGCAAGACTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp CGGGGATGGATTCCTGCTGCAGGAAGCGCTTCTGGATaGCGACAACCACCTTCTCGATCTCACAGAGCACCC +
Preference number: 6 (lower is better)
Translates to: RGWIPAAGSASG*RQPPSRSHRAP
Trigger: GGGTGCTCTGTGAGATCGAGAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp TGTGTGCCATTGCTGTGGCTCACGTTGCAGGAGGGGTaGCTGAGGTACAACGAGGACTCGGGGATGGATTCC +
Preference number: 6 (lower is better)
Translates to: CVPLLWLTLQEG*LRYNEDSGMDS
Trigger: GGAATCCATCCCCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAGCCACAGCAATGGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp TCTCTTCCCACTCCAGGTTCAGCTTCCGTGGAGACGTaGCTGGAGCTTCCTGGTGACAGACGCACCAGTACG +
Preference number: 6 (lower is better)
Translates to: SLPTPGSASVET*LELPGDRRTST
Trigger: CGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS CCA 72 bp AGACCTCGTCTCTTCCCACTCCAGGTTCAGCTTCCGTaGAGACGTGGCTGGAGCTTCCTGGTGACAGACGCA +
Preference number: 6 (lower is better)
Translates to: RPRLFPLQVQLP*RRGWSFLVTDA
Trigger: TGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGAAGCTGAACCTGGAGTGGGAAGAGACGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS CAA 72 bp GTGCTGGGCACCTCCTGCTCCACGCCTTTTCCTGTGTaGTTCCTGTCATACCCGACCACATTGCTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: VLGTSCSTPFPV*FLSYPTTLLPP
Trigger: AGGGGGCAGCAATGTGGTCGGGTATGACAGGAACAACACAGGAAAAGGCGTGGAGCAGGAGGTGCCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400427.5
ENST00000408989.6
CDS CAA 72 bp TTGTTAATGAAGCTGAAGGTGATGGGGTCCCGGGCGTaGCTAGACGGGGTTGCCCAGCACTCCGTCAGGACC +
Preference number: 6 (lower is better)
Translates to: LLMKLKVMGSRA*LDGVAQHSVRT
Trigger: GGTCCTGACGGAGTGCTGGGCAACCCCGTCTAGCAACGCCCGGGACCCCATCACCTTCAGCTTCATTAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp GAGGCTGGGAGCTTGAGAACAGCCTGGGCTACTCAGTaGGACCTCGTCTCTTCCCACTCCAGGTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: EAGSLRTAWATQ*DLVSSHSRFSF
Trigger: GAAGCTGAACCTGGAGTGGGAAGAGACGAGGTCTCACTGAGTAGCCCAGGCTGTTCTCAAGCTCCCAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485357.1
ENST00000491559.5
CDS GCA 72 bp CTGAGGTACAACGAGGACTCGGGGATGGATTCCTGCTaGAGGAAGCGCTTCTGGATGGCGACAACCACCTTC +
Preference number: 6 (lower is better)
Translates to: LRYNEDSGMDSC*RKRFWMATTTF
Trigger: GAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGTTGTACCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp GCTGTTCATAGCCCTCACAGCAGTCAGTCACGTTCCTaGACTCGGGGACCTCCACTACCAGGTACTGTGTCC +
Preference number: 6 (lower is better)
Translates to: AVHSPHSSQSRS*TRGPPLPGTVS
Trigger: GGACACAGTACCTGGTAGTGGAGGTCCCCGAGTCCAGGAACGTGACTGACTGCTGTGAGGGCTATGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp GTGGAGTCCATAGCAAGATCCGCCTCCCATGCCAGGTaGAAGCCGGTGCTGGTCACATTGGAGACCATGATC +
Preference number: 6 (lower is better)
Translates to: VESIARSASHAR*KPVLVTLETMI
Trigger: GATCATGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGCGGATCTTGCTATGGACTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 72 bp GACTCGGGGATGGATTCCTGCTGCAGGAAGCGCTTCTaGATGGCGACAACCACCTTCTCGATCTCACAGAGC +
Preference number: 6 (lower is better)
Translates to: DSGMDSCCRKRF*MATTTFSISQS
Trigger: GCTCTGTGAGATCGAGAAGGTGGTTGTCGCCATCCAGAAGCGCTTCCTGCAGCAGGAATCCATCCCCGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp TCCCATTCATTCTCTGGTAGCGCACGATCAGAAGGGTaGCTGTTCCCGCCACCAGCACGAAGATGGCCACCA +
Preference number: 6 (lower is better)
Translates to: SHSFSGSARSEG*LFPPPARRWPP
Trigger: TGGTGGCCATCTTCGTGCTGGTGGCGGGAACAGCCACCCTTCTGATCGTGCGCTACCAGAGAATGAATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000484712.1
CDS CAA 72 bp GCCTCCCATGCCAGGTGGAAGCCGGTGCTGGTCACATaGGAGACCATGATCCTCCCAATGGAGACAGGAACA +
Preference number: 6 (lower is better)
Translates to: ASHARWKPVLVT*ETMILPMETGT
Trigger: TGTTCCTGTCTCCATTGGGAGGATCATGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp CCTCCACCTTCTGTACAGTGTGGGTCACACGGTGGCTaGATAGCTGGTAGCCCAACAGGGAGAGGCCTTTTT +
Preference number: 6 (lower is better)
Translates to: PPPSVQCGSHGG*IAGSPTGRGLF
Trigger: AAAAAGGCCTCTCCCTGTTGGGCTACCAGCTATGCAGCCACCGTGTGACCCACACTGTACAGAAGGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS GCA 72 bp CACCACAATAAGGACCACATAACCGGCACCCAGGCCTaGTTCTGCATGAGGAGGCTCACCTTCAGACCGGAT +
Preference number: 6 (lower is better)
Translates to: HHNKDHITGTQA*FCMRRLTFRPD
Trigger: ATCCGGTCTGAAGGTGAGCCTCCTCATGCAGAAGCAGGCCTGGGTGCCGGTTATGTGGTCCTTATTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000484712.1
CDS GCA 72 bp CTGTCACGGCTGAGATCCAACTCCTGCACAGATTCCTaGTGTGAATCTCCTGAGATGTCACCACAGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LSRLRSNSCTDS*CESPEMSPQAG
Trigger: CCCCGCCTGTGGTGACATCTCAGGAGATTCACAGCAGGAATCTGTGCAGGAGTTGGATCTCAGCCGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS CCA 72 bp ACCACAGCAGGGCTCCACATGGAAGTCAGAGTGAGCTaGAAGGTGGAGTCCATAGCAAGATCCGCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: TTAGLHMEVRVS*KVESIARSASH
Trigger: ATGGGAGGCGGATCTTGCTATGGACTCCACCTTCCAGCTCACTCTGACTTCCATGTGGAGCCCTGCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000475047.1
CDS CCA 72 bp GTCCCCTTAACAAGCAAGGAATGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: VPLTSKECRRRM*FRSLGSTCWSS
Trigger: GGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGCTTGTTAAGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS CCA 72 bp TCTGTCTCACCTACCAAGGAATGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: SVSPTKECRRRM*FRSLGSTCWSS
Trigger: GGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGGTAGGTGAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497243.5
CDS CAA 72 bp GCCTCCCATGCCAGGTGGAAGCCGGTGCTGGTCACATaGGAGACCATGATCCTCCCAATGGAGACAGGAAAT +
Preference number: 6 (lower is better)
Translates to: ASHARWKPVLVT*ETMILPMETGN
Trigger: ATTTCCTGTCTCCATTGGGAGGATCATGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGGCATGGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS CAA 90 bp AGGCGCATGTGGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGTATGGTGACGTTGTACCAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: RRMWFRSLGSTCWSS*KSIFTSMVTLYQEP
Trigger: GGGCTCCTGGTACAACGTCACCATACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS TCA 72 bp CAGAGGCACGGTCTGGAAGGCGGTGAGAAATGCAGCTaGCACCTCCTGGACATCCACATCTGCGATTATCAG +
Preference number: 6 (lower is better)
Translates to: QRHGLEGGEKCS*HLLDIHICDYQ
Trigger: CTGATAATCGCAGATGTGGATGTCCAGGAGGTGTCAGCTGCATTTCTCACCGCCTTCCAGACCGTGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp CAGGCTAGCTCTGCAAGCTCACAGGGCTGTCACGGCTaGGATCCAACTCCTGCACAGATTCCTGCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: QASSASSQGCHG*DPTPAQIPAVN
Trigger: ATTCACAGCAGGAATCTGTGCAGGAGTTGGATCTCAGCCGTGACAGCCCTGTGAGCTTGCAGAGCTAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS CAA 72 bp TTTCCCTGTAGCTCCTGCTCCACGCCTTTTCCTGTGTaGTTCCTGTCATACCCGACCACATTGCTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: FPCSSCSTPFPV*FLSYPTTLLPP
Trigger: AGGGGGCAGCAATGTGGTCGGGTATGACAGGAACAACACAGGAAAAGGCGTGGAGCAGGAGCTACAGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400424.6
ENST00000408910.7
CDS CAA 90 bp ACTTGCTGGAGTTCCTTGAAGTCCATTTTCACCAGTATGGTGACGTaGTACCAGGAGCCCACAGGGTCCCTCTCTGGAGCTTGGGGTGCA +
Preference number: 6 (lower is better)
Translates to: TCWSSLKSIFTSMVT*YQEPTGSLSGAWGA
Trigger: TGCACCCCAAGCTCCAGAGAGGGACCCTGTGGGCTCCTGGTACAACGTCACCATACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp TCTGAAAGTCCAACTTCTCAAGAACGTACTTGGTTTTaGTGGTCAGCGTGGTGGAGACGTCGGCCCCGCACC +
Preference number: 6 (lower is better)
Translates to: SESPTSQERTWF*WSAWWRRRPRT
Trigger: GGTGCGGGGCCGACGTCTCCACCACGCTGACCATCAAAACCAAGTACGTTCTTGAGAAGTTGGACTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400421.6
CDS GCA 72 bp AGAAGGAACTCAGCTCAGCCATTGAGAAATGGGAAATaGCCACCAGTCCACATGAGTCCTCCGTCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: RRNSAQPLRNGK*PPVHMSPPSKG
Trigger: GCCCTTGGACGGAGGACTCATGTGGACTGGTGGGCATTTCCCATTTCTCAATGGCTGAGCTGAGTTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS CCA 72 bp ACACTCATTGACATCAAGGAATGCAGAAGGCGCATGTaGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: TLIDIKECRRRM*FRSLGSTCWSS
Trigger: GGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGATGTCAATGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485357.1
CDS GCA 72 bp AGAAGGCGCATGTGGTTCAGGAGCCTGGGGTCCACTTaGTGGAGTTCCTTGAAGTCCATTTTCACCAGTATG +
Preference number: 6 (lower is better)
Translates to: RRRMWFRSLGST*WSSLKSIFTSM
Trigger: CATACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCACATGCGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS GCA 72 bp AAGCTCACAGGGCTGTCACGGCTGAGATCCAACTCCTaGACAGATTCCTGCTGTGAATCTCCTGAGATGTCA +
Preference number: 6 (lower is better)
Translates to: KLTGLSRLRSNS*TDSCCESPEMS
Trigger: TGACATCTCAGGAGATTCACAGCAGGAATCTGTGCAGGAGTTGGATCTCAGCCGTGACAGCCCTGTGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475047.1
CDS CAA 72 bp AGTTCCTTGAAGTCCATTTTCACCAGTATGGTGACGTaGTACCAGGAGCCCACAGGGTCCCTCTCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: SSLKSIFTSMVT*YQEPTGSLSGA
Trigger: AGCTCCAGAGAGGGACCCTGTGGGCTCCTGGTACAACGTCACCATACTGGTGAAAATGGACTTCAAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 90 bp AGCCGGTTGAATATTATGGCCTCAAGAAGGAACTCAGCTCAGCCATaGAGAAATGGGAAATGCCCACCAGTCCACATGAGTCCTCCGTCC +
Preference number: 6 (lower is better)
Translates to: SRLNIMASRRNSAQP*RNGKCPPVHMSPPS
Trigger: GGACGGAGGACTCATGTGGACTGGTGGGCATTTCCCATTTCTCAATGGCTGAGCTGAGTTCCTTCTTGAGGCCATAATATTCAACCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS TCA 72 bp GGTTGCTTTTCTGCCTGTAGAGCCCCACTTCGATCCTaGCATCGTCACTGGCAGACACGCTATAATTCTGAG +
Preference number: 6 (lower is better)
Translates to: GCFSACRAPLRS*HRHWQTRYNSE
Trigger: CTCAGAATTATAGCGTGTCTGCCAGTGACGATGTCAGGATCGAAGTGGGGCTCTACAGGCAGAAAAGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 72 bp TGGTTCAGGAGCCTGGGGTCCACTTGCTGGAGTTCCTaGAAGTCCATTTTCACCAGTATGGTGACGTTGTAC +
Preference number: 6 (lower is better)
Translates to: WFRSLGSTCWSS*KSIFTSMVTLY
Trigger: GTACAACGTCACCATACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGTGGACCCCAGGCTCCTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000400421.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000466434.5
ENST00000468982.5
ENST00000485357.1
ENST00000491559.5
ENST00000497243.5
CDS CAA 90 bp TCCTGGCTGCTTGCGTTGCGAAAGGATTCTGAGTACCTGACATTTTaGATTCTGACCTTTCCAATGAGCTTCCGGGCTGCTGTCCTCACT +
Preference number: 6 (lower is better)
Translates to: SWLLALRKDSEYLTF*ILTFPMSFRAAVLT
Trigger: AGTGAGGACAGCAGCCCGGAAGCTCATTGGAAAGGTCAGAATCAAAAATGTCAGGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 90 bp CTCAGCTTGAACTGGGCCTTATTGGAGTTGCCGTTCTCAATCACGTaGGTGTATGTGTTGGGCACAGGGCAGCTGTTGTTAATGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LSLNWALLELPFSIT*VYVLGTGQLLLMKL
Trigger: CAGCTTCATTAACAACAGCTGCCCTGTGCCCAACACATACACCAACGTGATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAAGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 90 bp GGGCAGAAGGCCCTCAGGCCATTTGCCTTTCGCCATGATGCTGGGTaGATTGTTGACAGCAAAACAGGTTTACTGCAGAACATGGATAAG +
Preference number: 6 (lower is better)
Translates to: GQKALRPFAFRHDAG*IVDSKTGLLQNMDK
Trigger: CTTATCCATGTTCTGCAGTAAACCTGTTTTGCTGTCAACAATCAACCCAGCATCATGGCGAAAGGCAAATGGCCTGAGGGCCTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400423.6
ENST00000484174.5
CDS CCA 72 bp CAGTGTGGCTTCAGAGCTAGTTTCTTACTGGCCAATTaGGCAGTCCCCTTAACAAGCAAGGAATGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: QCGFRASFLLAN*AVPLTSKECRR
Trigger: CCTTCTGCATTCCTTGCTTGTTAAGGGGACTGCCCAATTGGCCAGTAAGAAACTAGCTCTGAAGCCACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468982.5
CDS CAA 72 bp AACTGGGCCTTATTGGAGTTGCCGTTCTCAATCACGTaGGTGTATGTGTTGGGCACAGGGCAGCTGTTGTTA +
Preference number: 6 (lower is better)
Translates to: NWALLELPFSIT*VYVLGTGQLLL
Trigger: TAACAACAGCTGCCCTGTGCCCAACACATACACCAACGTGATTGAGAACGGCAACTCCAATAAGGCCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS TCA 72 bp TTCTTAGAAGCACTAGGTATCATGGCAAGGCAGTGCTaGCGCGACAGCCGGTTGAATATTATGGCCTCAAGA +
Preference number: 6 (lower is better)
Translates to: FLEALGIMARQC*RDSRLNIMASR
Trigger: TCTTGAGGCCATAATATTCAACCGGCTGTCGCGTCAGCACTGCCTTGCCATGATACCTAGTGCTTCTAAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS CAA 72 bp TTGGAGTTGCCGTTCTCAATCACGTTGGTGTATGTGTaGGGCACAGGGCAGCTGTTGTTAATGAAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LELPFSITLVYV*GTGQLLLMKLK
Trigger: CTTCAGCTTCATTAACAACAGCTGCCCTGTGCCCAACACATACACCAACGTGATTGAGAACGGCAACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 72 bp GAAAAGATCCTCAGCTTGAACTGGGCCTTATTGGAGTaGCCGTTCTCAATCACGTTGGTGTATGTGTTGGGC +
Preference number: 6 (lower is better)
Translates to: EKILSLNWALLE*PFSITLVYVLG
Trigger: GCCCAACACATACACCAACGTGATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000484712.1
CDS CAA 90 bp TTGATAAAGGAAAAGATCCTCAGCTTGAACTGGGCCTTATTGGAGTaGCCGTTCTCAATCACGTTGGTGTATGTGTTGGGCACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: LIKEKILSLNWALLE*PFSITLVYVLGTGQ
Trigger: CTGCCCTGTGCCCAACACATACACCAACGTGATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTCCTTTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 90 bp GAGTCGTTGATAAAGGAAAAGATCCTCAGCTTGAACTGGGCCTTATaGGAGTTGCCGTTCTCAATCACGTTGGTGTATGTGTTGGGCACA +
Preference number: 6 (lower is better)
Translates to: ESLIKEKILSLNWAL*ELPFSITLVYVLGT
Trigger: TGTGCCCAACACATACACCAACGTGATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTCCTTTATCAACGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000484712.1
CDS CAA 90 bp GAGGGGTCCCCAGGACATCTGGTGTGTGGCAGAGGTTTCACTATTTaGCAGCAACCGAAAGTTATTGCAATTCTTAGAAGCACTAGGTAT +
Preference number: 6 (lower is better)
Translates to: EGSPGHLVCGRGFTI*QQPKVIAILRSTRY
Trigger: ATACCTAGTGCTTCTAAGAATTGCAATAACTTTCGGTTGCTGCAAAATAGTGAAACCTCTGCCACACACCAGATGTCCTGGGGACCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS CAA 72 bp CTTGCGTTGCGAAAGGATTCTGAGTACCTGACATTTTaGATTCTGACCTTTCCAATGAGCTTCCGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: LALRKDSEYLTF*ILTFPMSFRAA
Trigger: AGCAGCCCGGAAGCTCATTGGAAAGGTCAGAATCAAAAATGTCAGGTACTCAGAATCCTTTCGCAACGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp ATCCTGAAGAATAGTTCTAGGAAATCTCGATACTCCTaGCTGCTTGCGTTGCGAAAGGATTCTGAGTACCTG +
Preference number: 6 (lower is better)
Translates to: ILKNSSRKSRYS*LLALRKDSEYL
Trigger: CAGGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGAGTATCGAGATTTCCTAGAACTATTCTTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CCA 72 bp GAGTCGTTGATAAAGGAAAAGATCCTCAGCTTGAACTaGGCCTTATTGGAGTTGCCGTTCTCAATCACGTTG +
Preference number: 6 (lower is better)
Translates to: ESLIKEKILSLN*ALLELPFSITL
Trigger: CAACGTGATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTCCTTTATCAACGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000484712.1
CDS CAA 72 bp AATATTATGGCCTCAAGAAGGAACTCAGCTCAGCCATaGAGAAATGGGAAATGCCCACCAGTCCACATGAGT +
Preference number: 6 (lower is better)
Translates to: NIMASRRNSAQP*RNGKCPPVHMS
Trigger: ACTCATGTGGACTGGTGGGCATTTCCCATTTCTCAATGGCTGAGCTGAGTTCCTTCTTGAGGCCATAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS TCA 72 bp TCGATACTCCTGGCTGCTTGCGTTGCGAAAGGATTCTaGGTACCTGACATTTTTGATTCTGACCTTTCCAAT +
Preference number: 6 (lower is better)
Translates to: SILLAACVAKGF*VPDIFDSDLSN
Trigger: ATTGGAAAGGTCAGAATCAAAAATGTCAGGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGAGTATCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 72 bp ATAAAGGAAAAGATCCTCAGCTTGAACTGGGCCTTATaGGAGTTGCCGTTCTCAATCACGTTGGTGTATGTG +
Preference number: 6 (lower is better)
Translates to: IKEKILSLNWAL*ELPFSITLVYV
Trigger: CACATACACCAACGTGATTGAGAACGGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTCCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
ENST00000484712.1
CDS CAA 72 bp CCAGGACATCTGGTGTGTGGCAGAGGTTTCACTATTTaGCAGCAACCGAAAGTTATTGCAATTCTTAGAAGC +
Preference number: 6 (lower is better)
Translates to: PGHLVCGRGFTI*QQPKVIAILRS
Trigger: GCTTCTAAGAATTGCAATAACTTTCGGTTGCTGCAAAATAGTGAAACCTCTGCCACACACCAGATGTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484712.1
CDS GCA 72 bp CAGGACATCTGGTGTGTGGCAGAGGTTTCACTATTTTaGAGCAACCGAAAGTTATTGCAATTGATTTTGCAC +
Preference number: 6 (lower is better)
Translates to: QDIWCVAEVSLF*SNRKLLQLILH
Trigger: GTGCAAAATCAATTGCAATAACTTTCGGTTGCTGCAAAATAGTGAAACCTCTGCCACACACCAGATGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 72 bp CCAGGACATCTGGTGTGTGGCAGAGGTTTCACTATTTaGCAGCAACCGAAAGTTATTGCAATTGATTTTGCA +
Preference number: 6 (lower is better)
Translates to: PGHLVCGRGFTI*QQPKVIAIDFA
Trigger: TGCAAAATCAATTGCAATAACTTTCGGTTGCTGCAAAATAGTGAAACCTCTGCCACACACCAGATGTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400423.6
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6
CDS CAA 90 bp CTGAAGAATAGTTCTAGGAAATCTCGATACTCCTGGCTGCTTGCGTaGCGAAAGGATTCTGAGTACCTGACATTTTTGATTCTGACCTTT +
Preference number: 6 (lower is better)
Translates to: LKNSSRKSRYSWLLA*RKDSEYLTFLILTF
Trigger: AAAGGTCAGAATCAAAAATGTCAGGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGAGTATCGAGATTTCCTAGAACTATTCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400424.6
ENST00000400427.5
ENST00000408910.7
ENST00000408989.6