RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UMOD (Homo sapiens)

Ensembl gene IDs: ENSG00000169344

Ensembl transcript IDs: ENST00000396134.6, ENST00000396138.9, ENST00000570331.1, ENST00000570689.5, ENST00000570757.5, ENST00000570972.2, ENST00000571174.5, ENST00000573567.5, ENST00000574195.5, ENST00000576546.1, ENST00000576688.2, ENST00000577168.2

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCAGCAGGAGGTGAGATaGCAGCCATGGAGCACAGGG +
Preference number: 2 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCQQEVR*QPWSTG
Trigger: CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTG...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
3UTR-3UTR GCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATCCGCATCATGCCCCCTaGCCAGCAGGAGGTGAGATG +
Preference number: 2 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHPHHAP*PAGGEM
Trigger: CATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGG...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
3UTR-3UTR CCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCCAGCAGGAGGTGAGATaGCAGCCATGGAGCACAGGG +
Preference number: 2 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPQQEVR*QPWSTG
Trigger: CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTG...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
3UTR-3UTR CCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGGTGAGATGGCAGCCATaGAGCACAGGGCTTTCCGCT +
Preference number: 2 (lower is better)
Translates to: KHELSFLWLEHWPASCPLVRWQP*STGLSA
Trigger: AGCGGAAAGCCCTGTGCTCCATGGCTGCCATCTCAC...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
3UTR-3UTR CCA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATGTGAGATGGCAGCCATaGAGCACAGGGCTTTCCGCT +
Preference number: 2 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHVRWQP*STGLSA
Trigger: AGCGGAAAGCCCTGTGCTCCATGGCTGCCATCTCAC...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
3UTR-3UTR GCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTACACTGGCCCGCATCATaGCCCCTGCCCAGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLHWPAS*PLPSRR
Trigger: CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTG...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
3UTR CCA 72 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTaGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: QAEQSMNFLFCG*STGPHHAPCPA
Trigger: TGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCCGCAGGTCTCGGCCATaGGCGCACCGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAARRSRP*AHRPGP
Trigger: TGGGCCAGGGCGGTGCGCGCATGGCCGAGACCTGCG...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCGCAGGTCTCGGCCATaGGCGCACCGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGRRSRP*AHRPGP
Trigger: TGGGCCAGGGCGGTGCGCGCATGGCCGAGACCTGCG...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGTGGGGGCGGCCGTGTTaGAGCGCAGGACTGGCACGC +
Preference number: 4 (lower is better)
Translates to: VAGALARIMPPAQQEVRWWGRPC*SAGLAR
Trigger: GCGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCA...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGTGGGGGCGGCCGTGTTaGAGCGCAGGACTGGCACGC +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGWGRPC*SAGLAR
Trigger: GCGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCA...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCCACTGGCCCGCATCATaGCCCCTGCCCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSHWPAS*PLPSRR
Trigger: CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTG...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCGCCAGGGCGTGGCAGTaGCTAAGCCCAGGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSARAWQ*LSPGSA
Trigger: CGCTGAGCCTGGGCTTAGCCACTGCCACGCCCTGGC...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCCCCCGTACTCGGTGCTaGGCCAGTACTCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSPRTRC*ASTRPG
Trigger: CCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGG...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGCAGTGGCCGCTCCAGTaGGCGCAGGCCTTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRQWPLQ*AQALRL
Trigger: GAGCCGCAAGGCCTGCGCGCACTGGAGCGGCCACTG...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCTTTCCAGGGTGCGGTGCGCCTaGCACGGATCCGCGCACACG +
Preference number: 4 (lower is better)
Translates to: MPPAQQEVRWQPWSTGLSRVRCA*HGSAHT
Trigger: CGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCT...GGAAAGCCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGGGGGCCATCCCGGGCTaGGGTCACTACAGACACCCA +
Preference number: 4 (lower is better)
Translates to: VAGALARIMPPAQQEVRWGAIPG*GHYRHP
Trigger: TGGGTGTCTGTAGTGACCCCAGCCCGGGATGGCCCC...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCAGTACTCGTCCAGGGTaGGGTGCGCCTGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAASTRPG*GAPGTD
Trigger: ATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACT...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCCCTCCCCGTACTCGGTaGTGCGCCAGTACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAAPPRTR*CASTRP
Trigger: TGGACGAGTACTGGCGCAGCACCGAGTACGGGGAGG...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGTGGGGGCGGCCGTGTTaGAGCGCAGGACTGGCACGC +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEWGRPC*SAGLAR
Trigger: GCGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCA...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCCTTGCGGCTCACGATaGCCTCGTCGCTGGACGGAT +
Preference number: 4 (lower is better)
Translates to: VAGALARIMPPAQQEVRWPCGSR*PRRWTD
Trigger: ATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGG...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGAGTGCGCGCAGGCCTTaGGGCTCACGATGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: TGPHHAPCPAGGEMAAMESARRP*GSRCPR
Trigger: ACGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACT...CTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGCAGTGGCCGCTCCAGTaGGCGCAGGCCTTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRQWPLQ*AQALRL
Trigger: GAGCCGCAAGGCCTGCGCGCACTGGAGCGGCCACTG...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCCCGCATCATGCCCCCTaGCCAGCAGGAGGTGAGATG +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAAPHHAP*PAGGEM
Trigger: CATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGG...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCTCCCCTCCACGGAGCTaGGGTCTGTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSSPPRS*GLCSTP
Trigger: TGGCGTACTGCACAGACCCCAGCTCCGTGGAGGGGA...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGGGGGCCATCCCGGGCTaGGGTCACTACAGACACCCA +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGGAIPG*GHYRHP
Trigger: TGGGTGTCTGTAGTGACCCCAGCCCGGGATGGCCCC...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGAGTACTCGTCCAGGGTaGGGTGCGCCTGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGSTRPG*GAPGTD
Trigger: ATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACT...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCTTTCCCCCCGTACTCGGTGCTaGGCCAGTACTCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MPPAQQEVRWQPWSTGLSPRTRC*ASTRPG
Trigger: CCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGG...GGAAAGCCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGGGGGGTCCGTGGCATTaGTACTGGGTGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: VAGALARIMPPAQQEVRWGGPWH*YWVWHS
Trigger: GCTATGCCACACCCAGTAGCAATGCCACGGACCCCC...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCCGCATCATGCCCCCTaGCCAGCAGGAGGTGAGATG +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGPHHAP*PAGGEM
Trigger: CATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGG...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGATGCGCGCACCGCCCTaGCCCACGAAGCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRMRAPP*PTKRYQ
Trigger: CTGGTACCGCTTCGTGGGCCAGGGCGGTGCGCGCAT...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCAGGAGGTGAGATaGCAGCCATGGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: VAGALARIMPPAQQEVRWQQEVR*QPWSTG
Trigger: CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTG...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGCTGTGGCTGGAGCACTaGCCCGCATCATGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRLWLEH*PASCPL
Trigger: CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAG...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCTGGGGGACCTGGAGGTaGCACACCCATTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSWGTWR*HTHSLA
Trigger: AGCCAGAGAATGGGTGTGCCACCTCCAGGTCCCCCA...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570689.5
CDS-3UTR TCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGTCAGGCCATCGCCGGTaGAGCCCTCCTGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQESGHRR*SPPDRC
Trigger: GCACCTGTCAGGAGGGCTTCACCGGCGATGGCCTGA...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCGGTTGTCTCTGTCATTaGAGCCCGAGCACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAAGCLCH*SPSTGC
Trigger: ACAGCCGGTGCTCGGGCTTCAATGACAGAGACAACC...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCGCGCCATCCGCACGGTaGACATGCCGGTCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: HELSFLWLEHWPASCPLPAPSAR*TCRSRP
Trigger: TGGGCGGGACCGGCATGTTCACCGTGCGGATGGCGC...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGTGTCGCCTCCTCTCTaGGGAGTCCTCCAACTCCAC +
Preference number: 4 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTVSPPL*GVLQLH
Trigger: GTGGAGTTGGAGGACTCCGCAGAGAGGAGGCGACAC...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR GCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCGGAGCTGGGGTCTGTaGAGTACGCCAGGTGACACT +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGRSWGL*STPGDT
Trigger: AGTGTCACCTGGCGTACTGCACAGACCCCAGCTCCG...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGGGTCCGTGGCATTaGTACTGGGTGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTGGPWH*YWVWHS
Trigger: GCTATGCCACACCCAGTAGCAATGCCACGGACCCCC...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGGCACAGGCCTTCACCTaGACGGACGCATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRAQAFT*TDASHR
Trigger: CCTGTGGGATGCGTCCGTCCAGGTGAAGGCCTGTGC...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCGCGCCATCCGCACGGTaGACATGCCGGTCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCAPSAR*TCRSRP
Trigger: TGGGCGGGACCGGCATGTTCACCGTGCGGATGGCGC...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCGCCATCCGCACGGTaGACATGCCGGTCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPAPSAR*TCRSRP
Trigger: TGGGCGGGACCGGCATGTTCACCGTGCGGATGGCGC...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCGGACACCTTTCCGTGTaGTGGGACCCAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAAGHLSV*WDPSSG
Trigger: TCCTGAACTTGGGTCCCATCACACGGAAAGGTGTCC...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGGGACACCTTTCCGTGTaGTGGGACCCAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VAGALARIMPPAQQEVRWGHLSV*WDPSSG
Trigger: TCCTGAACTTGGGTCCCATCACACGGAAAGGTGTCC...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCGGACACCTTTCCGTGTaGTGGGACCCAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSGHLSV*WDPSSG
Trigger: TCCTGAACTTGGGTCCCATCACACGGAAAGGTGTCC...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGCCTTGCGGCTCACGATaGCCTCGTCGCTGGACGGAT +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRPCGSR*PRRWTD
Trigger: ATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGG...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCGCCAGGGCGTGGCAGTaGCTAAGCCCAGGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: HELSFLWLEHWPASCPLPARAWQ*LSPGSA
Trigger: CGCTGAGCCTGGGCTTAGCCACTGCCACGCCCTGGC...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCATGCGCGCACCGCCCTaGCCCACGAAGCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: HELSFLWLEHWPASCPLPMRAPP*PTKRYQ
Trigger: CTGGTACCGCTTCGTGGGCCAGGGCGGTGCGCGCAT...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCTCCCACAGGCAGCAGTaGCCGCTCCAGTGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: HELSFLWLEHWPASCPLPSHRQQ*PLQCAQ
Trigger: CTGCGCGCACTGGAGCGGCCACTGCTGCCTGTGGGA...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCTTTCCCCCAGACTCTTCAGCTaGCACTTGCCCAGCGACACC +
Preference number: 4 (lower is better)
Translates to: MPPAQQEVRWQPWSTGLSPRLFS*HLPSDT
Trigger: GGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGG...GGAAAGCCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCGCCCCCATCCAACATaGTGCCCACGTAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VAGALARIMPPAQQEVRWRPHPT*CPRREK
Trigger: CTTTTCTCTACGTGGGCACCATGTTGGATGGGGGCG...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAACGGAAAATCGGCCCTaGGAGGACTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTTENRP*EDSPFS
Trigger: GGAGAATGGGGAGTCCTCCCAGGGCCGATTTTCCGT...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCAAGCCCTTGAGACTGTaGCCTGGACACCTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAAKPLRL*PGHLSV
Trigger: CACGGAAAGGTGTCCAGGCCACAGTCTCAAGGGCTT...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGGTGAGATGGCAGCCATaGAGCACAGGGCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: TGPHHAPCPAGGEMAAMEVRWQP*STGLSA
Trigger: AGCGGAAAGCCCTGTGCTCCATGGCTGCCATCTCAC...CTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGTCTTCATCAGGACCCTaGTCAGTGTCGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGSSSGP*SVSPPL
Trigger: GAGAGGAGGCGACACTGAGCAGGGTCCTGATGAAGA...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR GCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTCGTCGCTGGACGGATaGGTGCCATTGAGCCACATG +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRSSLDG*VPLSHM
Trigger: CATGTGGCTCAATGGCACGCATCCGTCCAGCGACGA...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGCGGAGCTGGGGTCTGTaGAGTACGCCAGGTGACACT +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRRSWGL*STPGDT
Trigger: AGTGTCACCTGGCGTACTGCACAGACCCCAGCTCCG...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCCCCCATCCAACATGGTaGCCACGTAGAGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSPHPTW*PRREKP
Trigger: AGGCTTTTCTCTACGTGGGCACCATGTTGGATGGGG...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGTTGGTCATGAGCAGTaGAAATCGGGACAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTVGHEQ*KSGQVA
Trigger: GGCGACCTGTCCCGATTTGCACTGCTCATGACCAAC...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGGTTGGTCATGAGCAGTaGAAATCGGGACAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGVGHEQ*KSGQVA
Trigger: GGCGACCTGTCCCGATTTGCACTGCTCATGACCAAC...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCACTGGCCCGCATCATaGCCCCTGCCCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCHWPAS*PLPSRR
Trigger: CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTG...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCTCCTCCAACTCCACCTaGCTGGGCAGTTGTACTTTG +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSSSNST*LGSCTL
Trigger: CAAAGTACAACTGCCCAGCCAGGTGGAGTTGGAGGA...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR CCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGGCAGGAGAAGGAGCCTaGCGTGTTTACGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRAGEGA*RVYAAA
Trigger: AGCAGCTGCGTAAACACGCCAGGCTCCTTCTCCTGC...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGAGGGTGCGGTGCGCCTaGCACGGATCCGCGCACACG +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLRVRCA*HGSAHT
Trigger: CGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCT...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCAGGGTGCGGTGCGCCTaGCACGGATCCGCGCACACG +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPRVRCA*HGSAHT
Trigger: CGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCT...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCTCCCACAGGCAGCAGTaGCCGCTCCAGTGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCSHRQQ*PLQCAQ
Trigger: CTGCGCGCACTGGAGCGGCCACTGCTGCCTGTGGGA...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCCTTGAGACTGTGGCCTaGACACCTTTCCGTGTGATG +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAALETVA*TPFRVM
Trigger: CATCACACGGAAAGGTGTCCAGGCCACAGTCTCAAG...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGAAGCCCTTGAGACTGTaGCCTGGACACCTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGKPLRL*PGHLSV
Trigger: CACGGAAAGGTGTCCAGGCCACAGTCTCAAGGGCTT...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCCAGGTGGCATTGCTGTaGCATTCAGAGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSQVALL*HSEHHL
Trigger: AAGATGGTGCTCTGAATGTCACAGCAATGCCACCTG...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCCAGGTGGCATTGCTGTaGCATTCAGAGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAAQVALL*HSEHHL
Trigger: AAGATGGTGCTCTGAATGTCACAGCAATGCCACCTG...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCACGGATGCGTGCCATTaGGCCACATGGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPTDACH*ATWGRP
Trigger: CGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGT...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGACGGATGCGTGCCATTaGGCCACATGGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLTDACH*ATWGRP
Trigger: CGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGT...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCCACGGGATTGATCTATaGCACTCCCACTTCGGAATC +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSHGIDL*HSHFGI
Trigger: GATTCCGAAGTGGGAGTGTCATAGATCAATCCCGTG...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCCACGGGATTGATCTATaGCACTCCCACTTCGGAATC +
Preference number: 4 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAAHGIDL*HSHFGI
Trigger: GATTCCGAAGTGGGAGTGTCATAGATCAATCCCGTG...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCGCAGGTCTCGGCCATaGGCGCACCGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHARRSRP*AHRPGP
Trigger: TGGGCCAGGGCGGTGCGCGCATGGCCGAGACCTGCG...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGTCGTCGCTGGACGGATaGGTGCCATTGAGCCACATG +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRSSLDG*VPLSHM
Trigger: CATGTGGCTCAATGGCACGCATCCGTCCAGCGACGA...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGACGGAAAATCGGCCCTaGGAGGACTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQETENRP*EDSPFS
Trigger: GGAGAATGGGGAGTCCTCCCAGGGCCGATTTTCCGT...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATaGAGCACAGGGCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEVRWQP*STGLSA
Trigger: AGCGGAAAGCCCTGTGCTCCATGGCTGCCATCTCAC...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGCCATTCTCTGGCTCGTaGCCTGTCAGGGGCTCTATG +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEPFSGS*PVRGSM
Trigger: CATAGAGCCCCTGACAGGCCACGAGCCAGAGAATGG...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570689.5
CDS-3UTR TCA 90 bp ACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCTTTGTTCTTGCTTCTaGGGTGTCAGTGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TGPHHAPCPAGGEMAAMELCSCF*GVSGCS
Trigger: ACTGCAGCCACTGACACCTCAGAAGCAAGAACAAAG...CTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR TCA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACATGTCACTCAGGTACATaGAGACCTTGTCGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTCHSGT*RPCRSP
Trigger: TGGGCTTCGACAAGGTCTTCATGTACCTGAGTGACA...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTCCGCTGTCAGTCACTaGAAAGTCAGGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRSAVSH*KVRVKV
Trigger: CACCTTGACCCTGACTTTTCAGTGACTGACAGCGGA...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGCACCATCTTGCTTCTaGGGTGTCAGTGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEAPSCF*GVSGCS
Trigger: ACTGCAGCCACTGACACCTCAGAAGCAAGATGGTGC...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGCGTGTTTACGCAGCTaGTGTTGGCGGAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEACLRS*CWRSSC
Trigger: ACAACTGCTCCGCCAACAGCAGCTGCGTAAACACGC...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGGCGTGTTTACGCAGCTaGTGTTGGCGGAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRACLRS*CWRSSC
Trigger: ACAACTGCTCCGCCAACAGCAGCTGCGTAAACACGC...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCTCGTCCAGGGTGCGGTaGGCCTGGCACGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHASSRVR*AWHGSA
Trigger: CGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGA...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCAATGCGCGCACCGCCCTaGCCCACGAAGCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: FATLFKEMGASGTPSQVPMRAPP*PTKRYQ
Trigger: CTGGTACCGCTTCGTGGGCCAGGGCGGTGCGCGCAT...TGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCGCACAGGCCTTCACCTaGACGGACGCATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCAQAFT*TDASHR
Trigger: CCTGTGGGATGCGTCCGTCCAGGTGAAGGCCTGTGC...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGCCGTGGCATTGCTACTaGGTGTGGCATAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRPWHCY*VWHSSW
Trigger: CCAACTGCTATGCCACACCCAGTAGCAATGCCACGG...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGAAGCCCTTGAGACTGTaGCCTGGACACCTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEKPLRL*PGHLSV
Trigger: CACGGAAAGGTGTCCAGGCCACAGTCTCAAGGGCTT...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCGGCTCCAGTTACGCCTaGGGGACCTGGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPGSSYA*GTWRWH
Trigger: GTGCCACCTCCAGGTCCCCCAGGCGTAACTGGAGCC...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570689.5
CDS-3UTR TCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCAGCTGCCCACCACATTaGCACATGTGGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCSCPPH*HMWPGR
Trigger: ACGCCCTGGCCACATGTGTCAATGTGGTGGGCAGCT...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAAGCTGCCCACCACATTaGCACATGTGGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPSCPPH*HMWPGR
Trigger: ACGCCCTGGCCACATGTGTCAATGTGGTGGGCAGCT...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGTTCAGGACACGGGATTaGTCTATGACACTCCCACTT +
Preference number: 4 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGFRTRD*SMTLPL
Trigger: AAGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAA...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCGCTGCTAAAAGCCCTTaGGACTGTGGCCTGGACACC +
Preference number: 4 (lower is better)
Translates to: HELSFLWLEHWPASCPLPAAKSP*DCGLDT
Trigger: GGTGTCCAGGCCACAGTCTCAAGGGCTTTTAGCAGC...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCAGTACTCGTCCAGGGTaGGGTGCGCCTGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPSTRPG*GAPGTD
Trigger: ATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACT...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCACCCCGTACTCGGTGCTaGGCCAGTACTCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FATLFKEMGASGTPSQVPPRTRC*ASTRPG
Trigger: CCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGG...TGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCCCTCCCCGTACTCGGTaGTGCGCCAGTACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPPPRTR*CASTRP
Trigger: TGGACGAGTACTGGCGCAGCACCGAGTACGGGGAGG...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGTCCTCGTCTATACTaGACTCCTCACACGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRSPRLY*TPHTSP
Trigger: AGGGGACGTGTGAGGAGTGCAGTATAGACGAGGACT...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGACTGGCAGTGCCATCTaGCATTATTCGATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VAGALARIMPPAQQEVRWTGSAI*HYSICS
Trigger: ACTGCAAATCGAATAATGGCAGATGGCACTGCCAGT...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGTCTTCAGCTGGCACTTaGCCAGCGACACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRSSAGT*PATPSC
Trigger: ACATGAAGGTGTCGCTGGGCAAGTGCCAGCTGAAGA...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCCCGCATCATGCCCCCTaGCCAGCAGGAGGTGAGATG +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPPHHAP*PAGGEM
Trigger: CATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGG...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGCATCCAAGTCAGAGATaGCTGCCCCATCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRHPSQR*LPHPFC
Trigger: GCAGAAAGGATGGGGCAGCCATCTCTGACTTGGATG...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGCCAACTCCACCTGGCTaGGCAGTTGTACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRPTPPG*AVVLCS
Trigger: AGAACAAAGTACAACTGCCCAGCCAGGTGGAGTTGG...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR CCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCGCCAGGGCGTGGCAGTaGCTAAGCCCAGGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSARAWQ*LSPGSA
Trigger: CGCTGAGCCTGGGCTTAGCCACTGCCACGCCCTGGC...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGGTTGCAGCGCAGGACTaGCACGCAGGTCTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLVAAQD*HAGLGH
Trigger: ATGGCCGAGACCTGCGTGCCAGTCCTGCGCTGCAAC...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCTCCCACAGGCAGCAGTaGCCGCTCCAGTGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHASHRQQ*PLQCAQ
Trigger: CTGCGCGCACTGGAGCGGCCACTGCTGCCTGTGGGA...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGGCACAGGCCTTCACCTaGACGGACGCATCCCACAGG +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLAQAFT*TDASHR
Trigger: CCTGTGGGATGCGTCCGTCCAGGTGAAGGCCTGTGC...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCACCCAGACTCTTCAGCTaGCACTTGCCCAGCGACACC +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPPRLFS*HLPSDT
Trigger: GGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGG...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATCTGTGGCTGGAGCACTaGCCCGCATCATGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHLWLEH*PASCPL
Trigger: CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAG...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGCACTCTTTAAGGAGATaGGGGCCTCAGGTACACCGT +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEHSLRR*GPQVHR
Trigger: ACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTG...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCGGCACACCCATTCTCTaGCTCGTGGCCTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPGTPIL*LVACQG
Trigger: CCCCTGACAGGCCACGAGCCAGAGAATGGGTGTGCC...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570689.5
CDS-3UTR TCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGCAGGTGGCATTGCTGTaGCATTCAGAGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEQVALL*HSEHHL
Trigger: AAGATGGTGCTCTGAATGTCACAGCAATGCCACCTG...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCTCAGGCCATCGCCGGTaGAGCCCTCCTGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHASGHRR*SPPDRC
Trigger: GCACCTGTCAGGAGGGCTTCACCGGCGATGGCCTGA...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGTGTCACTCAGGTACATaGAGACCTTGTCGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRCHSGT*RPCRSP
Trigger: TGGGCTTCGACAAGGTCTTCATGTACCTGAGTGACA...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGCACCACTTGGATAGTTaGGTCTCTAGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LSFLWLEHWPASCPLPSRHHLDS*VSSVWA
Trigger: TGCCCACACACTAGAGACTCAACTATCCAAGTGGTG...CCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCCGGCCTCATCCTCCGTaGAGGTGGCATTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPRPHPP*RWHCCD
Trigger: GTCACAGCAATGCCACCTGCACGGAGGATGAGGCCG...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCTCGTCGCTGGACGGATaGGTGCCATTGAGCCACATG +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCSSLDG*VPLSHM
Trigger: CATGTGGCTCAATGGCACGCATCCGTCCAGCGACGA...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATAGTGCGCGCAGGCCTTaGGGCTCACGATGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHSARRP*GSRCPR
Trigger: ACGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACT...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCTGCCATTATTCGATTTaGAGTCCTCGTCTATACTGC +
Preference number: 4 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSCHYSI*SPRLYC
Trigger: GCAGTATAGACGAGGACTGCAAATCGAATAATGGCA...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACATGTTTGCACTGGCAGTaGCATCTGCCATTATTCGAT +
Preference number: 4 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTCLHWQ*HLPLFD
Trigger: ATCGAATAATGGCAGATGGCACTGCCAGTGCAAACA...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCCCCAGACTCTTCAGCTaGCACTTGCCCAGCGACACC +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPPRLFS*HLPSDT
Trigger: GGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGG...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCGGGGCCATCCCGGGCTaGGGTCACTACAGACACCCA +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHAGAIPG*GHYRHP
Trigger: TGGGTGTCTGTAGTGACCCCAGCCCGGGATGGCCCC...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCCCGTGGCATTGCTACTaGGTGTGGCATAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HELSFLWLEHWPASCPLPPWHCY*VWHSSW
Trigger: CCAACTGCTATGCCACACCCAGTAGCAATGCCACGG...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCACTTCAGGGGGTCCGTaGCATTGCTACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCTSGGP*HCYWVW
Trigger: CCACACCCAGTAGCAATGCCACGGACCCCCTGAAGT...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCTTTCCTGTGGGCATCTGTCCTaGATGATGAAGTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: MPPAQQEVRWQPWSTGLSCGHLS*MMKYFR
Trigger: CCTGAAGTACTTCATCATCCAGGACAGATGCCCACA...GGAAAGCCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCTGTGGCTGGAGCACTaGCCCGCATCATGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSLWLEH*PASCPL
Trigger: CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAG...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGGCTGCTAAAAGCCCTTaGGACTGTGGCCTGGACACC +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLAAKSP*DCGLDT
Trigger: GGTGTCCAGGCCACAGTCTCAAGGGCTTTTAGCAGC...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCACGGCCTCATCCTCCGTaGAGGTGGCATTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: FATLFKEMGASGTPSQVPRPHPP*RWHCCD
Trigger: GTCACAGCAATGCCACCTGCACGGAGGATGAGGCCG...TGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCCTTGCGGCTCACGATaGCCTCGTCGCTGGACGGAT +
Preference number: 4 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHPCGSR*PRRWTD
Trigger: ATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGG...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGTTTGCACTGGCAGTaGCATCTGCCATTATTCGAT +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRCLHWQ*HLPLFD
Trigger: ATCGAATAATGGCAGATGGCACTGCCAGTGCAAACA...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCAGGGGGTAGGAGCATaGAAAGTTGATTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: TGPHHAPCPAGGEMAAMEQGVGA*KVDFDV
Trigger: AACATCAAAATCAACTTTGCATGCTCCTACCCCCTG...CTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGGCAGGAGAAGGAGCCTaGCGTGTTTACGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLAGEGA*RVYAAA
Trigger: AGCAGCTGCGTAAACACGCCAGGCTCCTTCTCCTGC...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATTCCCCTCCACGGAGCTaGGGTCTGTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHSPPRS*GLCSTP
Trigger: TGGCGTACTGCACAGACCCCAGCTCCGTGGAGGGGA...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGAAGTCCTGTTTGCACTaGCAGTGCCATCTGCCATTA +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEKSCLH*QCHLPL
Trigger: TAATGGCAGATGGCACTGCCAGTGCAAACAGGACTT...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCGCCCCCATCCAACATaGTGCCCACGTAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCRPHPT*CPRREK
Trigger: CTTTTCTCTACGTGGGCACCATGTTGGATGGGGGCG...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGCCATTCTCCACCACTTaGATAGTTGAGTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRPFSTT*IVESLV
Trigger: CACTAGAGACTCAACTATCCAAGTGGTGGAGAATGG...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAAACCGGAACATCTaGACGGAAAATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPANRNI*TENRPW
Trigger: CCAGGGCCGATTTTCCGTCCAGATGTTCCGGTTTGC...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAAAGTCAGGGTCAAGGTaGCCGAGAGAAGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPKSGSR*PREAEA
Trigger: TGCCTCTGCTTCTCTCGGCCACCTTGACCCTGACTT...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAATCAGGCCATCGCCGGTaGAGCCCTCCTGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKSGHRR*SPPDRC
Trigger: GCACCTGTCAGGAGGGCTTCACCGGCGATGGCCTGA...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCAGCTGCTAAAAGCCCTTaGGACTGTGGCCTGGACACC +
Preference number: 4 (lower is better)
Translates to: FATLFKEMGASGTPSQVPAAKSP*DCGLDT
Trigger: GGTGTCCAGGCCACAGTCTCAAGGGCTTTTAGCAGC...TGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCTCCGCTGTCAGTCACTaGAAAGTCAGGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCSAVSH*KVRVKV
Trigger: CACCTTGACCCTGACTTTTCAGTGACTGACAGCGGA...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGGAAAAGAAGGCAGGCTaGACAAAGCATGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: SFLWLEHWPASCPLPSRREKKAG*TKHELS
Trigger: AGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTTC...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGGCACCATCTTGCTTCTaGGGTGTCAGTGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLAPSCF*GVSGCS
Trigger: ACTGCAGCCACTGACACCTCAGAAGCAAGATGGTGC...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCACTCATCCACGTCTGTaGAGCCGAGACCGGGCGACA +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSTHPRL*SRDRAT
Trigger: TGTCGCCCGGTCTCGGCTGCACAGACGTGGATGAGT...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATACTCATCCACGTCTGTaGAGCCGAGACCGGGCGACA +
Preference number: 4 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHTHPRL*SRDRAT
Trigger: TGTCGCCCGGTCTCGGCTGCACAGACGTGGATGAGT...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAGTGCGCGCAGGCCTTaGGGCTCACGATGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKSARRP*GSRCPR
Trigger: ACGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACT...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCGGAGCTGGGGTCTGTaGAGTACGCCAGGTGACACT +
Preference number: 4 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHRSWGL*STPGDT
Trigger: AGTGTCACCTGGCGTACTGCACAGACCCCAGCTCCG...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAAGTCCTCGTCTATACTaGACTCCTCACACGTCCCCT +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPSPRLY*TPHTSP
Trigger: AGGGGACGTGTGAGGAGTGCAGTATAGACGAGGACT...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCTTTCCCAGGGGGTAGGAGCATaGAAAGTTGATTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: MPPAQQEVRWQPWSTGLSQGVGA*KVDFDV
Trigger: AACATCAAAATCAACTTTGCATGCTCCTACCCCCTG...GGAAAGCCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAAGAGAAAAGCCTCAGTaGACAGTGTCACGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPREKPQ*TVSRRS
Trigger: GCTCCTCCGTGACACTGTCCACTGAGGCTTTTCTCT...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCAGAGAAAAGCCTCAGTaGACAGTGTCACGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCREKPQ*TVSRRS
Trigger: GCTCCTCCGTGACACTGTCCACTGAGGCTTTTCTCT...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGCCATTCTCCACCACTTaGATAGTTGAGTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: FFSVAGALARIMPPAQQEPFSTT*IVESLV
Trigger: CACTAGAGACTCAACTATCCAAGTGGTGGAGAATGG...CTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATACGGAAAATCGGCCCTaGGAGGACTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHTENRP*EDSPFS
Trigger: GGAGAATGGGGAGTCCTCCCAGGGCCGATTTTCCGT...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCACATAGCAGTTGGTCATaGGCAGTGCAAATCGGGACA +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPHSSWS*AVQIGT
Trigger: TGTCCCGATTTGCACTGCTCATGACCAACTGCTATG...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGTCCGCTGTCAGTCACTaGAAAGTCAGGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLSAVSH*KVRVKV
Trigger: CACCTTGACCCTGACTTTTCAGTGACTGACAGCGGA...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTCTTCAGCTGGCACTTaGCCAGCGACACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPSSAGT*PATPSC
Trigger: ACATGAAGGTGTCGCTGGGCAAGTGCCAGCTGAAGA...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCGATGATGATCTCATCTaGCAGGTAGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HELSFLWLEHWPASCPLPDDDLI*QVEGVA
Trigger: AGCAACACCCTCTACCTGGCAGATGAGATCATCATC...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCCATCCAAGTCAGAGATaGCTGCCCCATCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPHPSQR*LPHPFC
Trigger: GCAGAAAGGATGGGGCAGCCATCTCTGACTTGGATG...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCGCAGGAGAAGGAGCCTaGCGTGTTTACGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSAGEGA*RVYAAA
Trigger: AGCAGCTGCGTAAACACGCCAGGCTCCTTCTCCTGC...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCACACCTTCATGTCATTaGCCCCACATTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCTPSCH*PHIPAC
Trigger: ACAGGCTGGAATGTGGGGCCAATGACATGAAGGTGT...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATCGCCCCCATCCAACATaGTGCCCACGTAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHRPHPT*CPRREK
Trigger: CTTTTCTCTACGTGGGCACCATGTTGGATGGGGGCG...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCACCGTGGCATTGCTACTaGGTGTGGCATAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: FATLFKEMGASGTPSQVPPWHCY*VWHSSW
Trigger: CCAACTGCTATGCCACACCCAGTAGCAATGCCACGG...TGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCGTGAGATGGCAGCCATaGAGCACAGGGCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSVRWQP*STGLSA
Trigger: AGCGGAAAGCCCTGTGCTCCATGGCTGCCATCTCAC...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCTTTCTTTTCTGTGGCTaGAGCACTGGCCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCFLFCG*STGPHH
Trigger: ATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAA...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCGAACTTTCTTTTCTGTaGCTGGAGCACTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPELSFL*LEHWPA
Trigger: TGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTC...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCATCTTCCCTGGCTGGTaGAATCTTCATCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPIFPGW*NLHQDP
Trigger: AGGGTCCTGATGAAGATTTCACCAGCCAGGGAAGAT...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR TCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAGCTGCCCACCACATTaGCACATGTGGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKSCPPH*HMWPGR
Trigger: ACGCCCTGGCCACATGTGTCAATGTGGTGGGCAGCT...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGTCACTCAGGTACATaGAGACCTTGTCGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPCHSGT*RPCRSP
Trigger: TGGGCTTCGACAAGGTCTTCATGTACCTGAGTGACA...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCCACGGGATTGATCTATaGCACTCCCACTTCGGAATC +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPHGIDL*HSHFGI
Trigger: GATTCCGAAGTGGGAGTGTCATAGATCAATCCCGTG...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTATCGTCCAGGGTGCGGTaGGCCTGGCACGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLSSRVR*AWHGSA
Trigger: CGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGA...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTTCGTCCAGGGTGCGGTaGGCCTGGCACGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSSSRVR*AWHGSA
Trigger: CGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGA...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTACAGTGGCCGCTCCAGTaGGCGCAGGCCTTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLQWPLQ*AQALRL
Trigger: GAGCCGCAAGGCCTGCGCGCACTGGAGCGGCCACTG...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCGATGATGATCTCATCTaGCAGGTAGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCDDDLI*QVEGVA
Trigger: AGCAACACCCTCTACCTGGCAGATGAGATCATCATC...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCGTTGGTCATGAGCAGTaGAAATCGGGACAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSVGHEQ*KSGQVA
Trigger: GGCGACCTGTCCCGATTTGCACTGCTCATGACCAAC...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAGGGGGTCCGTGGCATTaGTACTGGGTGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKGGPWH*YWVWHS
Trigger: GCTATGCCACACCCAGTAGCAATGCCACGGACCCCC...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAAAGTCCTGTTTGCACTaGCAGTGCCATCTGCCATTA +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPKSCLH*QCHLPL
Trigger: TAATGGCAGATGGCACTGCCAGTGCAAACAGGACTT...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGGGGTGTTGCTGTAAGTaGCATGGGTTTCATTCCTCG +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLGCCCK*HGFHSS
Trigger: CGAGGAATGAAACCCATGCCACTTACAGCAACACCC...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTAACGGATGCGTGCCATTaGGCCACATGGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLTDACH*ATWGRP
Trigger: CGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGT...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAACTGGCAGTGCCATCTaGCATTATTCGATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPTGSAI*HYSICS
Trigger: ACTGCAAATCGAATAATGGCAGATGGCACTGCCAGT...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCCCCATCCAACATGGTaGCCACGTAGAGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSPHPTW*PRREKP
Trigger: AGGCTTTTCTCTACGTGGGCACCATGTTGGATGGGG...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCACTGGCCCGCATCATaGCCCCTGCCCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSHWPAS*PLPSRR
Trigger: CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTG...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATACACCTTCATGTCATTaGCCCCACATTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHTPSCH*PHIPAC
Trigger: ACAGGCTGGAATGTGGGGCCAATGACATGAAGGTGT...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATGGGTGTTGCTGTAAGTaGCATGGGTTTCATTCCTCG +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHGCCCK*HGFHSS
Trigger: CGAGGAATGAAACCCATGCCACTTACAGCAACACCC...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGTGGGCATCTGTCCTaGATGATGAAGTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPCGHLS*MMKYFR
Trigger: CCTGAAGTACTTCATCATCCAGGACAGATGCCCACA...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCTTGAGACTGTGGCCTaGACACCTTTCCGTGTGATG +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHALETVA*TPFRVM
Trigger: CATCACACGGAAAGGTGTCCAGGCCACAGTCTCAAG...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCGAACTTTCTTTTCTGTaGCTGGAGCACTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSELSFL*LEHWPA
Trigger: TGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTC...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATAGCAGTTGGTCATaGGCAGTGCAAATCGGGACA +
Preference number: 4 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSHSSWS*AVQIGT
Trigger: TGTCCCGATTTGCACTGCTCATGACCAACTGCTATG...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCACCACTTGGATAGTTaGGTCTCTAGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHAHHLDS*VSSVWA
Trigger: TGCCCACACACTAGAGACTCAACTATCCAAGTGGTG...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTCAGGACACGGGATTaGTCTATGACACTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHFRTRD*SMTLPL
Trigger: AAGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAA...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCGGTCTAGATAGCACCTaGCCAAAGGAAAGACGGGTT +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHAGLDST*PKERRV
Trigger: AACCCGTCTTTCCTTTGGGCAGGTGCTATCTAGACC...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396134.6
ENST00000396138.9
CDS-3UTR GCA 90 bp AAAAGAAGGCAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTACTCATCCACGTCTGTaGAGCCGAGACCGGGCGACA +
Preference number: 4 (lower is better)
Translates to: KRRQAEQSMNFLFCGWSTTHPRL*SRDRAT
Trigger: TGTCGCCCGGTCTCGGCTGCACAGACGTGGATGAGT...AGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp AAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGACTGGCAGTGCCATCTaGCATTATTCGATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: KHELSFLWLEHWPASCPLTGSAI*HYSICS
Trigger: ACTGCAAATCGAATAATGGCAGATGGCACTGCCAGT...CAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTCTGTCTCTGATGTCTaGTGTCCTGAAGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHSVSDV*CPEARK
Trigger: CTTTCTGGCTTCAGGACACCAGACATCAGAGACAGA...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396134.6
ENST00000396138.9
CDS-3UTR CCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACAGTTGCAGCGCAGGACTaGCACGCAGGTCTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTVAAQD*HAGLGH
Trigger: ATGGCCGAGACCTGCGTGCCAGTCCTGCGCTGCAAC...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATAAGTCCTGTTTGCACTaGCAGTGCCATCTGCCATTA +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHKSCLH*QCHLPL
Trigger: TAATGGCAGATGGCACTGCCAGTGCAAACAGGACTT...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCACACCTTCATGTCATTaGCCCCACATTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHATPSCH*PHIPAC
Trigger: ACAGGCTGGAATGTGGGGCCAATGACATGAAGGTGT...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAGCAAACCGGAACATCTaGACGGAAAATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKANRNI*TENRPW
Trigger: CCAGGGCCGATTTTCCGTCCAGATGTTCCGGTTTGC...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGTCAGGGTCAAGGTaGCCGAGAGAAGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKKSGSR*PREAEA
Trigger: TGCCTCTGCTTCTCTCGGCCACCTTGACCCTGACTT...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACATTGGCGGAGCAGTTGTaGGCTCCAGGAATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTLAEQL*APGMAH
Trigger: GTGCGCCATTCCTGGAGCTCACAACTGCTCCGCCAA...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCATTATTCGATTTaGAGTCCTCGTCTATACTGC +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPCHYSI*SPRLYC
Trigger: GCAGTATAGACGAGGACTGCAAATCGAATAATGGCA...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCCAGGGGGTAGGAGCATaGAAAGTTGATTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPQGVGA*KVDFDV
Trigger: AACATCAAAATCAACTTTGCATGCTCCTACCCCCTG...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCGAGCACCATCTTCCCTaGCTGGTGAAATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHAEHHLP*LVKSSS
Trigger: TGATGAAGATTTCACCAGCCAGGGAAGATGGTGCTC...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR CCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTAGTTGCAGCGCAGGACTaGCACGCAGGTCTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLVAAQD*HAGLGH
Trigger: ATGGCCGAGACCTGCGTGCCAGTCCTGCGCTGCAAC...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTATCCCCTCCACGGAGCTaGGGTCTGTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLSPPRS*GLCSTP
Trigger: TGGCGTACTGCACAGACCCCAGCTCCGTGGAGGGGA...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATTGTGGGCATCTGTCCTaGATGATGAAGTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHCGHLS*MMKYFR
Trigger: CCTGAAGTACTTCATCATCCAGGACAGATGCCCACA...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATCCATTCTCCACCACTTaGATAGTTGAGTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHPFSTT*IVESLV
Trigger: CACTAGAGACTCAACTATCCAAGTGGTGGAGAATGG...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAACACTCTTTAAGGAGATaGGGGCCTCAGGTACACCGT +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKHSLRR*GPQVHR
Trigger: ACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTG...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTATTGGCGGAGCAGTTGTaGGCTCCAGGAATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLLAEQL*APGMAH
Trigger: GTGCGCCATTCCTGGAGCTCACAACTGCTCCGCCAA...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACAGGTTGTCTCTGTCATTaGAGCCCGAGCACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTGCLCH*SPSTGC
Trigger: ACAGCCGGTGCTCGGGCTTCAATGACAGAGACAACC...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATGAAAAGAAGGCAGGCTaGACAAAGCATGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHEKKAG*TKHELS
Trigger: AGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTTC...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTACGGCCTCATCCTCCGTaGAGGTGGCATTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLRPHPP*RWHCCD
Trigger: GTCACAGCAATGCCACCTGCACGGAGGATGAGGCCG...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACAACTTCAGGGGGTCCGTaGCATTGCTACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTTSGGP*HCYWVW
Trigger: CCACACCCAGTAGCAATGCCACGGACCCCCTGAAGT...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCATGCACTTTTCATTCATaGTGTCACAGAGATAGACTT +
Preference number: 4 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPCTFHS*CHRDRL
Trigger: AAGTCTATCTCTGTGACACCATGAATGAAAAGTGCA...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTACAGCAGGAGGTGAGATaGCAGCCATGGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLQQEVR*QPWSTG
Trigger: CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTG...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAATTTCTTTTCTGTGGCTaGAGCACTGGCCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKFLFCG*STGPHH
Trigger: ATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAA...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTAGGTTGTCTCTGTCATTaGAGCCCGAGCACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLGCLCH*SPSTGC
Trigger: ACAGCCGGTGCTCGGGCTTCAATGACAGAGACAACC...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAGATGATGATCTCATCTaGCAGGTAGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKDDDLI*QVEGVA
Trigger: AGCAACACCCTCTACCTGGCAGATGAGATCATCATC...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTAACTTCAGGGGGTCCGTaGCATTGCTACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLTSGGP*HCYWVW
Trigger: CCACACCCAGTAGCAATGCCACGGACCCCCTGAAGT...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AAAAGAAGGCAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTCTTGAGACTGTGGCCTaGACACCTTTCCGTGTGATG +
Preference number: 4 (lower is better)
Translates to: KRRQAEQSMNFLFCGWSTLETVA*TPFRVM
Trigger: CATCACACGGAAAGGTGTCCAGGCCACAGTCTCAAG...AGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACAAAGTCAGGGTCAAGGTaGCCGAGAGAAGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTKSGSR*PREAEA
Trigger: TGCCTCTGCTTCTCTCGGCCACCTTGACCCTGACTT...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCCGTGCAGGTGGCATTaGTGTGACATTCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSPCRWH*CDIQST
Trigger: GGTGCTCTGAATGTCACAGCAATGCCACCTGCACGG...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTGCGTGTTTACGCAGCTaGTGTTGGCGGAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSACLRS*CWRSSC
Trigger: ACAACTGCTCCGCCAACAGCAGCTGCGTAAACACGC...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACATCTTCAGCTGGCACTTaGCCAGCGACACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTSSAGT*PATPSC
Trigger: ACATGAAGGTGTCGCTGGGCAAGTGCCAGCTGAAGA...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp AAAAGAAGGCAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGGTGTTGCTGTAAGTaGCATGGGTTTCATTCCTCG +
Preference number: 4 (lower is better)
Translates to: KRRQAEQSMNFLFCGWSTGCCCK*HGFHSS
Trigger: CGAGGAATGAAACCCATGCCACTTACAGCAACACCC...AGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTAGCAAACCGGAACATCTaGACGGAAAATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLANRNI*TENRPW
Trigger: CCAGGGCCGATTTTCCGTCCAGATGTTCCGGTTTGC...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTGCACTTTTCATTCATaGTGTCACAGAGATAGACTT +
Preference number: 4 (lower is better)
Translates to: LPHSLRRWGPQVHRHKSHCTFHS*CHRDRL
Trigger: AAGTCTATCTCTGTGACACCATGAATGAAAAGTGCA...ATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACACTCTTTAAGGAGATaGGGGCCTCAGGTACACCGT +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTHSLRR*GPQVHR
Trigger: ACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTG...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACACCACTTGGATAGTTaGGTCTCTAGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTHHLDS*VSSVWA
Trigger: TGCCCACACACTAGAGACTCAACTATCCAAGTGGTG...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACAGGTCTAGATAGCACCTaGCCAAAGGAAAGACGGGTT +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTGLDST*PKERRV
Trigger: AACCCGTCTTTCCTTTGGGCAGGTGCTATCTAGACC...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396134.6
ENST00000396138.9
CDS-3UTR GCA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCCCCATCCAACATGGTaGCCACGTAGAGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSPHPTW*PRREKP
Trigger: AGGCTTTTCTCTACGTGGGCACCATGTTGGATGGGG...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCATCCAAGTCAGAGATaGCTGCCCCATCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSHPSQR*LPHPFC
Trigger: GCAGAAAGGATGGGGCAGCCATCTCTGACTTGGATG...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTAGAGAAAAGCCTCAGTaGACAGTGTCACGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSREKPQ*TVSRRS
Trigger: GCTCCTCCGTGACACTGTCCACTGAGGCTTTTCTCT...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp AAAAGAAGGCAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTTGTTTGCACTGGCAGTaGCATCTGCCATTATTCGAT +
Preference number: 4 (lower is better)
Translates to: KRRQAEQSMNFLFCGWSTCLHWQ*HLPLFD
Trigger: ATCGAATAATGGCAGATGGCACTGCCAGTGCAAACA...AGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR TCA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTTTCAGGACACGGGATTaGTCTATGACACTCCCACTT +
Preference number: 4 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSFRTRD*SMTLPL
Trigger: AAGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAA...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CCA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTATCTGTCTCTGATGTCTaGTGTCCTGAAGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLSVSDV*CPEARK
Trigger: CTTTCTGGCTTCAGGACACCAGACATCAGAGACAGA...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396134.6
ENST00000396138.9
CDS-3UTR TCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACAGAAAAGAAGGCAGGCTaGACAAAGCATGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTEKKAG*TKHELS
Trigger: AGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTTC...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR GCA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACATGCCATTATTCGATTTaGAGTCCTCGTCTATACTGC +
Preference number: 4 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTCHYSI*SPRLYC
Trigger: GCAGTATAGACGAGGACTGCAAATCGAATAATGGCA...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 90 bp CCCTCCCCGTACTCGGTGCTGCGCCAGTACTCGTCCAGGGTGCGGTaGGCCTGGCACGGATCCGCGCACACGAGCGCGTCGCCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: PSPYSVLRQYSSRVR*AWHGSAHTSASPSG
Trigger: GCCCGAGGGCGACGCGCTCGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 90 bp CCGTACTCGGTGCTGCGCCAGTACTCGTCCAGGGTGCGGTGCGCCTaGCACGGATCCGCGCACACGAGCGCGTCGCCCTCGGGCACGCAG +
Preference number: 5 (lower is better)
Translates to: PYSVLRQYSSRVRCA*HGSAHTSASPSGTQ
Trigger: CTGCGTGCCCGAGGGCGACGCGCTCGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTACGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 90 bp CGTAGCCCTCCCCGTACTCGGTGCTGCGCCAGTACTCGTCCAGGGTaGGGTGCGCCTGGCACGGATCCGCGCACACGAGCGCGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: RSPPRTRCCASTRPG*GAPGTDPRTRARRP
Trigger: AGGGCGACGCGCTCGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGGAGGGCTACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 90 bp CGCGCAGGTCCGTGTCGCAGGCGTAGCCCTCCCCGTACTCGGTGCTaGGCCAGTACTCGTCCAGGGTGCGGTGCGCCTGGCACGGATCCG +
Preference number: 5 (lower is better)
Translates to: RAGPCRRRSPPRTRC*ASTRPGCGAPGTDP
Trigger: CGGATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGGAGGGCTACGCCTGCGACACGGACCTGCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 90 bp AGCCGCGCAGGTCCGTGTCGCAGGCGTAGCCCTCCCCGTACTCGGTaGTGCGCCAGTACTCGTCCAGGGTGCGGTGCGCCTGGCACGGAT +
Preference number: 5 (lower is better)
Translates to: SRAGPCRRRSPPRTR*CASTRPGCGAPGTD
Trigger: ATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGGAGGGCTACGCCTGCGACACGGACCTGCGCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 90 bp TGCGCGCAGGCCTTGCGGCTCACGATGCCCTCGTCGCTGGACGGATaGGTGCCATTGAGCCACATGGGGGCGGCCGTGTTGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: CAQALRLTMPSSLDG*VPLSHMGAAVLQRR
Trigger: CCTGCGCTGCAACACGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 90 bp CCTTGCGGCTCACGATGCCCTCGTCGCTGGACGGATGCGTGCCATTaGGCCACATGGGGGCGGCCGTGTTGCAGCGCAGGACTGGCACGC +
Preference number: 5 (lower is better)
Translates to: PCGSRCPRRWTDACH*ATWGRPCCSAGLAR
Trigger: GCGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACACAGTGCGCGCAGGCCTaGCGGCTCACGATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTQCAQA*RLTMPS
Trigger: CGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACTG...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGCAGTGCGCGCAGGCCTaGCGGCTCACGATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRQCAQA*RLTMPS
Trigger: CGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACTG...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp ATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCTTTCCGACGGATGCGTGCCATaGAGCCACATGGGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: MPPAQQEVRWQPWSTGLSDGCVP*SHMGAA
Trigger: GGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTC...GGAAAGCCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 90 bp GGGCGACAGGCGGAAGCCTTCGGGGCAGACGCAGGAGAAGGAGCCTaGCGTGTTTACGCAGCTGCTGTTGGCGGAGCAGTTGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRQAEAFGADAGEGA*RVYAAAVGGAVVSS
Trigger: GGAGCTCACAACTGCTCCGCCAACAGCAGCTGCGTAAACACGCCAGGCTCCTTCTCCTGCGTCTGCCCCGAAGGCTTCCGCCTGTCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
ENST00000571174.5
ENST00000573567.5
ENST00000574195.5
ENST00000576688.2
ENST00000577168.2
CDS-3UTR CAA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCGGTTGTCTCTGTCATaGAAGCCCGAGCACCGGCTG +
Preference number: 5 (lower is better)
Translates to: VAGALARIMPPAQQEVRWRLSLS*KPEHRL
Trigger: CAGCCGGTGCTCGGGCTTCAATGACAGAGACAACCG...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCCGGTTGTCTCTGTCATaGAAGCCCGAGCACCGGCTG +
Preference number: 5 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAARLSLS*KPEHRL
Trigger: CAGCCGGTGCTCGGGCTTCAATGACAGAGACAACCG...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp GTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGTGTCACGGAGGAGCCTaGGTAGGGCTGCGTGTAGGA +
Preference number: 5 (lower is better)
Translates to: VAGALARIMPPAQQEVRWCHGGA*VGLRVG
Trigger: TCCTACACGCAGCCCTACCAAGGCTCCTCCGTGACA...CCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCGACACCCAGTCCCGGTaGTCTCTGTCATTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAADTQSR*SLSLKP
Trigger: GGGCTTCAATGACAGAGACAACCGGGACTGGGTGTC...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACATGTCACGGAGGAGCCTaGGTAGGGCTGCGTGTAGGA +
Preference number: 5 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTCHGGA*VGLRVG
Trigger: TCCTACACGCAGCCCTACCAAGGCTCCTCCGTGACA...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCATGGGGGCGGCCGTGTaGCAGCGCAGGACTGGCACG +
Preference number: 5 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCMGAAV*QRRTGT
Trigger: CGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCAT...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCACAGTGCGCGCAGGCCTaGCGGCTCACGATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPQCAQA*RLTMPS
Trigger: CGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACTG...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp GCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGACACCTTCATGTCATaGGCCCCACATTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: ARIMPPAQQEVRWQPWSTDTFMS*APHSSL
Trigger: CAGGCTGGAATGTGGGGCCAATGACATGAAGGTGTC...TGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 90 bp AAGGAGCCTGGCGTGTTTACGCAGCTGCTGTTGGCGGAGCAGTTGTaGGCTCCAGGAATGGCGCACTCATCCAGGTCCACGCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: KEPGVFTQLLLAEQL*APGMAHSSRSTQVR
Trigger: CCTGACCTGCGTGGACCTGGATGAGTGCGCCATTCCTGGAGCTCACAACTGCTCCGCCAACAGCAGCTGCGTAAACACGCCAGGCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
ENST00000571174.5
ENST00000573567.5
ENST00000574195.5
ENST00000576688.2
ENST00000577168.2
CDS-3UTR CAA 90 bp TTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCAATGGGGGCGGCCGTGTaGCAGCGCAGGACTGGCACG +
Preference number: 5 (lower is better)
Translates to: FATLFKEMGASGTPSQVPMGAAV*QRRTGT
Trigger: CGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCAT...TGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp TGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCCCAGAGCAGGTAGGCTaGCACTTTTCATTCATGGTG +
Preference number: 5 (lower is better)
Translates to: WSTGPHHAPCPAGGEMAAPEQVG*HFSFMV
Trigger: CACCATGAATGAAAAGTGCAAGCCTACCTGCTCTGG...GGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 90 bp GGGGGTCCGTGGCATTGCTACTGGGTGTGGCATAGCAGTTGGTCATaGGCAGTGCAAATCGGGACAGGTCGCCCCCATCCAACATGGTGC +
Preference number: 5 (lower is better)
Translates to: GGPWHCYWVWHSSWS*AVQIGTGRPHPTWC
Trigger: GCACCATGTTGGATGGGGGCGACCTGTCCCGATTTGCACTGCTCATGACCAACTGCTATGCCACACCCAGTAGCAATGCCACGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS CCA 90 bp GGTCGCCCCCATCCAACATGGTGCCCACGTAGAGAAAAGCCTCAGTaGACAGTGTCACGGAGGAGCCTTGGTAGGGCTGCGTGTAGGAAG +
Preference number: 5 (lower is better)
Translates to: GRPHPTWCPRREKPQ*TVSRRSLGRAACRK
Trigger: CTTCCTACACGCAGCCCTACCAAGGCTCCTCCGTGACACTGTCCACTGAGGCTTTTCTCTACGTGGGCACCATGTTGGATGGGGGCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS-3UTR CAA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATATGGGGGCGGCCGTGTaGCAGCGCAGGACTGGCACG +
Preference number: 5 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHMGAAV*QRRTGT
Trigger: CGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCAT...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCCAGAGCAGGTAGGCTaGCACTTTTCATTCATGGTG +
Preference number: 5 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGPEQVG*HFSFMV
Trigger: CACCATGAATGAAAAGTGCAAGCCTACCTGCTCTGG...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATGACGGATGCGTGCCATaGAGCCACATGGGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHDGCVP*SHMGAA
Trigger: GGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTC...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCGAGATATCAGTGATGTaGAAGTCCTGTTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSEISVM*KSCLHW
Trigger: CCAGTGCAAACAGGACTTCAACATCACTGATATCTC...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp ATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCTTTCCAGGTACATGAAGACCTaGTCGAAGCCCAGACTCTTC +
Preference number: 5 (lower is better)
Translates to: MPPAQQEVRWQPWSTGLSRYMKT*SKPRLF
Trigger: GAAGAGTCTGGGCTTCGACAAGGTCTTCATGTACCT...GGAAAGCCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 90 bp GGTTTCATTCCTCGTCAACACTGTCCCACAGGGGCCATCCCGGGCTaGGGTCACTACAGACACCCAGTCCCGGTTGTCTCTGTCATTGAA +
Preference number: 5 (lower is better)
Translates to: GFIPRQHCPTGAIPG*GHYRHPVPVVSVIE
Trigger: TTCAATGACAGAGACAACCGGGACTGGGTGTCTGTAGTGACCCCAGCCCGGGATGGCCCCTGTGGGACAGTGTTGACGAGGAATGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp TCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGAGACGGGTTGGCCCTTaGAATTTTTCTCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: SFLWLEHWPASCPLPSRRRRVGP*NFSLCL
Trigger: GAGACAGAGAGAAAAATTCAAAGGGCCAACCCGTCT...CCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396134.6
ENST00000396138.9
CDS-3UTR CAA 90 bp CTGGCCCGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCCATGCAAAGTTGATTTaGATGTTGAGGTCACGGATG +
Preference number: 5 (lower is better)
Translates to: LARIMPPAQQEVRWQPWSHAKLI*MLRSRM
Trigger: CATCCGTGACCTCAACATCAAAATCAACTTTGCATG...GCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 90 bp GGCAGTGCCATCTGCCATTATTCGATTTGCAGTCCTCGTCTATACTaGACTCCTCACACGTCCCCTCCACGGAGCTGGGGTCTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: GSAICHYSICSPRLY*TPHTSPPRSWGLCS
Trigger: ACTGCACAGACCCCAGCTCCGTGGAGGGGACGTGTGAGGAGTGCAGTATAGACGAGGACTGCAAATCGAATAATGGCAGATGGCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCGACACCTTCATGTCATaGGCCCCACATTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCDTFMS*APHSSL
Trigger: CAGGCTGGAATGTGGGGCCAATGACATGAAGGTGTC...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAGACACCTTCATGTCATaGGCCCCACATTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPDTFMS*APHSSL
Trigger: CAGGCTGGAATGTGGGGCCAATGACATGAAGGTGTC...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCGACACCCAGTCCCGGTaGTCTCTGTCATTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPDTQSR*SLSLKP
Trigger: GGGCTTCAATGACAGAGACAACCGGGACTGGGTGTC...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CGCATCATGCCCCCTGCCCAGCAGGAGGTGAGATGGCAGCCATGGAGCACAGGGCATGCAAAGTTGATTTaGATGTTGAGGTCACGGATG +
Preference number: 5 (lower is better)
Translates to: RIMPPAQQEVRWQPWSTGHAKLI*MLRSRM
Trigger: CATCCGTGACCTCAACATCAAAATCAACTTTGCATG...CCCTGTGCTCCATGGCTGCCATCTCACCTCCTGCTGGGCAGGGGGCATGATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 90 bp CTGGTGAAATCTTCATCAGGACCCTGCTCAGTGTCGCCTCCTCTCTaGGGAGTCCTCCAACTCCACCTGGCTGGGCAGTTGTACTTTGTT +
Preference number: 5 (lower is better)
Translates to: LVKSSSGPCSVSPPL*GVLQLHLAGQLYFV
Trigger: AACAAAGTACAACTGCCCAGCCAGGTGGAGTTGGAGGACTCCGCAGAGAGGAGGCGACACTGAGCAGGGTCCTGATGAAGATTTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396134.6
ENST00000574195.5
CDS-3UTR CAA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCATGTTGAAGTCCTGTTaGCACTGGCAGTGCCATCTG +
Preference number: 5 (lower is better)
Translates to: HELSFLWLEHWPASCPLPMLKSC*HWQCHL
Trigger: CAGATGGCACTGCCAGTGCAAACAGGACTTCAACAT...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCGGTTGTCTCTGTCATaGAAGCCCGAGCACCGGCTG +
Preference number: 5 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHARLSLS*KPEHRL
Trigger: CAGCCGGTGCTCGGGCTTCAATGACAGAGACAACCG...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 90 bp TCACTCAGGTACATGAAGACCTTGTCGAAGCCCAGACTCTTCAGCTaGCACTTGCCCAGCGACACCTTCATGTCATTGGCCCCACATTCC +
Preference number: 5 (lower is better)
Translates to: SLRYMKTLSKPRLFS*HLPSDTFMSLAPHS
Trigger: GGAATGTGGGGCCAATGACATGAAGGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGGCTTCGACAAGGTCTTCATGTACCTGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 90 bp TGGACGGAAAATCGGCCCTGGGAGGACTCCCCATTCTCCACCACTTaGATAGTTGAGTCTCTAGTGTGTGGGCATCTGTCCTGGATGATG +
Preference number: 5 (lower is better)
Translates to: WTENRPWEDSPFSTT*IVESLVCGHLSWMM
Trigger: CATCATCCAGGACAGATGCCCACACACTAGAGACTCAACTATCCAAGTGGTGGAGAATGGGGAGTCCTCCCAGGGCCGATTTTCCGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS-3UTR CAA 90 bp CATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCCTGGGCAGTTGTACTTaGTTCTTGCTTCTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: HELSFLWLEHWPASCPLPLGSCT*FLLLRC
Trigger: ACACCTCAGAAGCAAGAACAAAGTACAACTGCCCAG...GGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR CAA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCACACCTGGCTGGGCAGTaGTACTTTGTTCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPHLAGQ*YFVLAS
Trigger: AGAAGCAAGAACAAAGTACAACTGCCCAGCCAGGTG...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR CAA 90 bp AAAAGAAGGCAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGACGGATGCGTGCCATaGAGCCACATGGGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: KRRQAEQSMNFLFCGWSTDGCVP*SHMGAA
Trigger: GGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTC...AGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp AGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCGTTCAGGACACGGGATaGATCTATGACACTCCCACT +
Preference number: 5 (lower is better)
Translates to: SMNFLFCGWSTGPHHAPCVQDTG*IYDTPT
Trigger: AGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAAC...GCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp ATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCTGCCCAATTCAGAGCACCATCTaGCTTCTGAGGTGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: MNFLFCGWSTGPHHAPCPIQSTI*LLRCQW
Trigger: CCACTGACACCTCAGAAGCAAGATGGTGCTCTGAAT...TGGGCAGGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396138.9
ENST00000570689.5
CDS TCA 90 bp TGGACACCTTTCCGTGTGATGGGACCCAAGTTCAGGACACGGGATTaGTCTATGACACTCCCACTTCGGAATCTGGTCCCAGAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: WTPFRVMGPKFRTRD*SMTLPLRNLVPEQV
Trigger: TACCTGCTCTGGGACCAGATTCCGAAGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAACTTGGGTCCCATCACACGGAAAGGTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS-3UTR CAA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAATGTCACGGAGGAGCCTaGGTAGGGCTGCGTGTAGGA +
Preference number: 5 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKCHGGA*VGLRVG
Trigger: TCCTACACGCAGCCCTACCAAGGCTCCTCCGTGACA...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp TCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAGACACCCAGTCCCGGTaGTCTCTGTCATTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SLRRWGPQVHRHKSHFEKDTQSR*SLSLKP
Trigger: GGGCTTCAATGACAGAGACAACCGGGACTGGGTGTC...TTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp TTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCCACCAGAGCAGGTAGGCTaGCACTTTTCATTCATGGTG +
Preference number: 5 (lower is better)
Translates to: FATLFKEMGASGTPSQVPPEQVG*HFSFMV
Trigger: CACCATGAATGAAAAGTGCAAGCCTACCTGCTCTGG...TGGGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 90 bp AAATCGGCCCTGGGAGGACTCCCCATTCTCCACCACTTGGATAGTTaGGTCTCTAGTGTGTGGGCATCTGTCCTGGATGATGAAGTACTT +
Preference number: 5 (lower is better)
Translates to: KSALGGLPILHHLDS*VSSVWASVLDDEVL
Trigger: AAGTACTTCATCATCCAGGACAGATGCCCACACACTAGAGACTCAACTATCCAAGTGGTGGAGAATGGGGAGTCCTCCCAGGGCCGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS-3UTR CAA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATATGTTGAAGTCCTGTTaGCACTGGCAGTGCCATCTG +
Preference number: 5 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHMLKSC*HWQCHL
Trigger: CAGATGGCACTGCCAGTGCAAACAGGACTTCAACAT...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCCCGAGATATCAGTGATGTaGAAGTCCTGTTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: QSMNFLFCGWSTGPHHAPEISVM*KSCLHW
Trigger: CCAGTGCAAACAGGACTTCAACATCACTGATATCTC...GGGGGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCAGGTACATGAAGACCTaGTCGAAGCCCAGACTCTTC +
Preference number: 5 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSRYMKT*SKPRLF
Trigger: GAAGAGTCTGGGCTTCGACAAGGTCTTCATGTACCT...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATGTTCAGGACACGGGATaGATCTATGACACTCCCACT +
Preference number: 5 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHVQDTG*IYDTPT
Trigger: AGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAAC...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATAGACGGGTTGGCCCTTaGAATTTTTCTCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: QAEQSMNFLFCGWSTGPHRRVGP*NFSLCL
Trigger: GAGACAGAGAGAAAAATTCAAAGGGCCAACCCGTCT...ATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396134.6
ENST00000396138.9
CDS-3UTR CAA 90 bp GAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTGGCCCGCATCATGCCCTGCCATTATTCGATTaGCAGTCCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: EQSMNFLFCGWSTGPHHALPLFD*QSSSIL
Trigger: CAGTATAGACGAGGACTGCAAATCGAATAATGGCAG...GGCATGATGCGGGCCAGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp ATTTTGCCACACTCTTTAAGGAGATGGGGGCCTCAGGTACACCGTCACAAGTCCGAGATATCAGTGATGTaGAAGTCCTGTTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: ILPHSLRRWGPQVHRHKSEISVM*KSCLHW
Trigger: CCAGTGCAAACAGGACTTCAACATCACTGATATCTC...GGACTTGTGACGGTGTACCTGAGGCCCCCATCTCCTTAAAGAGTGTGGCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 90 bp AGGAGGGAGATATCAGTGATGTTGAAGTCCTGTTTGCACTGGCAGTaGCATCTGCCATTATTCGATTTGCAGTCCTCGTCTATACTGCAC +
Preference number: 5 (lower is better)
Translates to: RREISVMLKSCLHWQ*HLPLFDLQSSSILH
Trigger: GTGCAGTATAGACGAGGACTGCAAATCGAATAATGGCAGATGGCACTGCCAGTGCAAACAGGACTTCAACATCACTGATATCTCCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 90 bp TGCTCCAGGAGGGAGATATCAGTGATGTTGAAGTCCTGTTTGCACTaGCAGTGCCATCTGCCATTATTCGATTTGCAGTCCTCGTCTATA +
Preference number: 5 (lower is better)
Translates to: CSRREISVMLKSCLH*QCHLPLFDLQSSSI
Trigger: TATAGACGAGGACTGCAAATCGAATAATGGCAGATGGCACTGCCAGTGCAAACAGGACTTCAACATCACTGATATCTCCCTCCTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 90 bp CAGGAAGTAGCCAGATGGAATAGTGTTCTGGACTCACCACTTTACTaGAGGCAGCTTTGGATTTTAACTGATCCTCTGCCTGAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: QEVARWNSVLDSPLY*RQLWILTDPLPEAR
Trigger: TCTGGCTTCAGGCAGAGGATCAGTTAAAATCCAAAGCTGCCTTCAGTAAAGTGGTGAGTCCAGAACACTATTCCATCTGGCTACTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576688.2
CDS-3UTR CAA 90 bp AAAAGAAGGCAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTAGGTACATGAAGACCTaGTCGAAGCCCAGACTCTTC +
Preference number: 5 (lower is better)
Translates to: KRRQAEQSMNFLFCGWSTRYMKT*SKPRLF
Trigger: GAAGAGTCTGGGCTTCGACAAGGTCTTCATGTACCT...AGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACAATTCAGAGCACCATCTaGCTTCTGAGGTGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTIQSTI*LLRCQW
Trigger: CCACTGACACCTCAGAAGCAAGATGGTGCTCTGAAT...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396138.9
ENST00000570689.5
CDS TCA 90 bp CAGGAAGTAGCCAGATGGAATAGTGTTCTGGACTCACCACTTTACTaGAGGCAGCTTTGGATTTTAACTGATCCTCTGCCTGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: QEVARWNSVLDSPLY*RQLWILTDPLPGNF
Trigger: AAAGTTTCCAGGCAGAGGATCAGTTAAAATCCAAAGCTGCCTTCAGTAAAGTGGTGAGTCCAGAACACTATTCCATCTGGCTACTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570972.2
CDS-3UTR CAA 90 bp AAAAGAAGGCAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTAGTTGTACTTTGTTCTaGCTTCTGAGGTGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: KRRQAEQSMNFLFCGWSTSCTLF*LLRCQW
Trigger: CCACTGACACCTCAGAAGCAAGAACAAAGTACAACT...AGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396134.6
CDS-3UTR CAA 90 bp AAAAGAAGGCAGGCTGAACAAAGCATGAACTTTCTTTTCTGTGGCTGGAGCACTCTGCCATTATTCGATTaGCAGTCCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: KRRQAEQSMNFLFCGWSTLPLFD*QSSSIL
Trigger: CAGTATAGACGAGGACTGCAAATCGAATAATGGCAG...AGTGCTCCAGCCACAGAAAAGAAAGTTCATGCTTTGTTCAGCCTGCCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp CGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTATGTTGAAGTCCTGTTaGCACTGGCAGTGCCATCTG +
Preference number: 5 (lower is better)
Translates to: RHKSHFEKKQHLKTQAVSMLKSC*HWQCHL
Trigger: CAGATGGCACTGCCAGTGCAAACAGGACTTCAACAT...AGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS-3UTR CAA 90 bp TTTGAGAAAAAGCAGCATTTAAAGACACAGGCTGTTTCTCGACAGCCAGGATTAGTTCAGGACACGGGATaGATCTATGACACTCCCACT +
Preference number: 5 (lower is better)
Translates to: FEKKQHLKTQAVSRQPGLVQDTG*IYDTPT
Trigger: AGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAAC...TAATCCTGGCTGTCGAGAAACAGCCTGTGTCTTTAAATGCTGCTTTTTCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 90 bp GCTACTTCAGGTCTAGATAGCACTAAAGATCATGAAGCCAATAATTaGCAGAATAATGACTCAAATCCAGGTCTGACCCCAGTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: ATSGLDSTKDHEANN*QNNDSNPGLTPVSK
Trigger: CTTGGACACTGGGGTCAGACCTGGATTTGAGTCATTATTCTGCCAATTATTGGCTTCATGATCTTTAGTGCTATCTAGACCTGAAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571174.5
CDS-3UTR CAA 90 bp CCTCAGGTACACCGTCACAAGTCCCATTTTGAGAAAAAGCAGCATTTAAAGACACTGCCATTATTCGATTaGCAGTCCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: PQVHRHKSHFEKKQHLKTLPLFD*QSSSIL
Trigger: CAGTATAGACGAGGACTGCAAATCGAATAATGGCAG...TGTCTTTAAATGCTGCTTTTTCTCAAAATGGGACTTGTGACGGTGTACCTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 90 bp CCAAAGGAAAGACGGGTTGGCCCTTTGAATTTTTCTCTCTGTCTCTaGTGTCTGGTGTCTAAAGATCATGAAGCCAATAATTGGCAGAAT +
Preference number: 5 (lower is better)
Translates to: PKERRVGPLNFSLCL*CLVSKDHEANNWQN
Trigger: ATTCTGCCAATTATTGGCTTCATGATCTTTAGACACCAGACATCAGAGACAGAGAGAAAAATTCAAAGGGCCAACCCGTCTTTCCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570757.5
CDS TCA 90 bp TGTTCTGGACTCACCACTTTACTGAAGGCAGCTTTGGATTTTAACTaGTCCTCTGCCTGGAAACTTTCAATTTGCCTGGATCACTTATTC +
Preference number: 5 (lower is better)
Translates to: CSGLTTLLKAALDFN*SSAWKLSICLDHLF
Trigger: GAATAAGTGATCCAGGCAAATTGAAAGTTTCCAGGCAGAGGATCAGTTAAAATCCAAAGCTGCCTTCAGTAAAGTGGTGAGTCCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570972.2
CDS CCA 72 bp GTGCTGCGCCAGTACTCGTCCAGGGTGCGGTGCGCCTaGCACGGATCCGCGCACACGAGCGCGTCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: VLRQYSSRVRCA*HGSAHTSASPS
Trigger: CGAGGGCGACGCGCTCGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp GAGCCACATGGGGGCGGCCGTGTTGCAGCGCAGGACTaGCACGCAGGTCTCGGCCATGCGCGCACCGCCCTG +
Preference number: 6 (lower is better)
Translates to: EPHGGGRVAAQD*HAGLGHARTAL
Trigger: CAGGGCGGTGCGCGCATGGCCGAGACCTGCGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCATGTGGCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 72 bp CCCCGTACTCGGTGCTGCGCCAGTACTCGTCCAGGGTaGGGTGCGCCTGGCACGGATCCGCGCACACGAGCG +
Preference number: 6 (lower is better)
Translates to: PRTRCCASTRPG*GAPGTDPRTRA
Trigger: CGCTCGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 72 bp CCGTGTCGCAGGCGTAGCCCTCCCCGTACTCGGTGCTaGGCCAGTACTCGTCCAGGGTGCGGTGCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PCRRRSPPRTRC*ASTRPGCGAPG
Trigger: GCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGGAGGGCTACGCCTGCGACACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 72 bp TACTCGGTGCTGCGCCAGTACTCGTCCAGGGTGCGGTaGGCCTGGCACGGATCCGCGCACACGAGCGCGTCG +
Preference number: 6 (lower is better)
Translates to: YSVLRQYSSRVR*AWHGSAHTSAS
Trigger: CGACGCGCTCGTGTGCGCGGATCCGTGCCAGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 72 bp GGTCCGTGTCGCAGGCGTAGCCCTCCCCGTACTCGGTaGTGCGCCAGTACTCGTCCAGGGTGCGGTGCGCCT +
Preference number: 6 (lower is better)
Translates to: GPCRRRSPPRTR*CASTRPGCGAP
Trigger: AGGCGCACCGCACCCTGGACGAGTACTGGCGCAGCACCGAGTACGGGGAGGGCTACGCCTGCGACACGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 72 bp ACAGGCAGCAGTGGCCGCTCCAGTGCGCGCAGGCCTTaGGGCTCACGATGCCCTCGTCGCTGGACGGATGCG +
Preference number: 6 (lower is better)
Translates to: TGSSGRSSARRP*GSRCPRRWTDA
Trigger: CGCATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACTGGAGCGGCCACTGCTGCCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 72 bp ACGGACGCATCCCACAGGCAGCAGTGGCCGCTCCAGTaGGCGCAGGCCTTGCGGCTCACGATGCCCTCGTCG +
Preference number: 6 (lower is better)
Translates to: TDASHRQQWPLQ*AQALRLTMPSS
Trigger: CGACGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACTGGAGCGGCCACTGCTGCCTGTGGGATGCGTCCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CAA 90 bp GCCTTGCGGCTCACGATGCCCTCGTCGCTGGACGGATGCGTGCCATaGAGCCACATGGGGGCGGCCGTGTTGCAGCGCAGGACTGGCACG +
Preference number: 6 (lower is better)
Translates to: ALRLTMPSSLDGCVP*SHMGAAVLQRRTGT
Trigger: CGTGCCAGTCCTGCGCTGCAACACGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CAA 90 bp GACGCATCCCACAGGCAGCAGTGGCCGCTCCAGTGCGCGCAGGCCTaGCGGCTCACGATGCCCTCGTCGCTGGACGGATGCGTGCCATTG +
Preference number: 6 (lower is better)
Translates to: DASHRQQWPLQCAQA*RLTMPSSLDGCVPL
Trigger: CAATGGCACGCATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGGCCTGCGCGCACTGGAGCGGCCACTGCTGCCTGTGGGATGCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 72 bp GCCTTGCGGCTCACGATGCCCTCGTCGCTGGACGGATaGGTGCCATTGAGCCACATGGGGGCGGCCGTGTTG +
Preference number: 6 (lower is better)
Translates to: ALRLTMPSSLDG*VPLSHMGAAVL
Trigger: CAACACGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTCCAGCGACGAGGGCATCGTGAGCCGCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CAA 72 bp CTCACGATGCCCTCGTCGCTGGACGGATGCGTGCCATaGAGCCACATGGGGGCGGCCGTGTTGCAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: LTMPSSLDGCVP*SHMGAAVLQRR
Trigger: CCTGCGCTGCAACACGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTCCAGCGACGAGGGCATCGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 72 bp TCACGATGCCCTCGTCGCTGGACGGATGCGTGCCATTaGGCCACATGGGGGCGGCCGTGTTGCAGCGCAGGA +
Preference number: 6 (lower is better)
Translates to: SRCPRRWTDACH*ATWGRPCCSAG
Trigger: TCCTGCGCTGCAACACGGCCGCCCCCATGTGGCTCAATGGCACGCATCCGTCCAGCGACGAGGGCATCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp CCTCGTCAACACTGTCCCACAGGGGCCATCCCGGGCTaGGGTCACTACAGACACCCAGTCCCGGTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: PRQHCPTGAIPG*GHYRHPVPVVS
Trigger: AGAGACAACCGGGACTGGGTGTCTGTAGTGACCCCAGCCCGGGATGGCCCCTGTGGGACAGTGTTGACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CAA 90 bp CAGGGGCCATCCCGGGCTGGGGTCACTACAGACACCCAGTCCCGGTaGTCTCTGTCATTGAAGCCCGAGCACCGGCTGTCACTCAGGTAC +
Preference number: 6 (lower is better)
Translates to: QGPSRAGVTTDTQSR*SLSLKPEHRLSLRY
Trigger: GTACCTGAGTGACAGCCGGTGCTCGGGCTTCAATGACAGAGACAACCGGGACTGGGTGTCTGTAGTGACCCCAGCCCGGGATGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp CCCACCACATTGACACATGTGGCCAGGGCGTGGCAGTaGCTAAGCCCAGGCTCAGCGCACTCATCCACGTCT +
Preference number: 6 (lower is better)
Translates to: PTTLTHVARAWQ*LSPGSAHSSTS
Trigger: AGACGTGGATGAGTGCGCTGAGCCTGGGCTTAGCCACTGCCACGCCCTGGCCACATGTGTCAATGTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
ENST00000573567.5
CDS CAA 72 bp TCCCGGGCTGGGGTCACTACAGACACCCAGTCCCGGTaGTCTCTGTCATTGAAGCCCGAGCACCGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: SRAGVTTDTQSR*SLSLKPEHRLS
Trigger: TGACAGCCGGTGCTCGGGCTTCAATGACAGAGACAACCGGGACTGGGTGTCTGTAGTGACCCCAGCCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 72 bp GGCGTGTTTACGCAGCTGCTGTTGGCGGAGCAGTTGTaGGCTCCAGGAATGGCGCACTCATCCAGGTCCACG +
Preference number: 6 (lower is better)
Translates to: GVFTQLLLAEQL*APGMAHSSRST
Trigger: CGTGGACCTGGATGAGTGCGCCATTCCTGGAGCTCACAACTGCTCCGCCAACAGCAGCTGCGTAAACACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
ENST00000570757.5
ENST00000571174.5
ENST00000573567.5
ENST00000574195.5
ENST00000576688.2
ENST00000577168.2
CDS CCA 72 bp AGGAGAAGGAGCCTGGCGTGTTTACGCAGCTGCTGTTaGCGGAGCAGTTGTGAGCTCCAGGAATGGCGCACT +
Preference number: 6 (lower is better)
Translates to: RRRSLACLRSCC*RSSCELQEWRT
Trigger: AGTGCGCCATTCCTGGAGCTCACAACTGCTCCGCCAACAGCAGCTGCGTAAACACGCCAGGCTCCTTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
ENST00000571174.5
ENST00000573567.5
ENST00000574195.5
ENST00000576688.2
ENST00000577168.2
CDS CAA 72 bp CCCGAGCACCGGCTGTCACTCAGGTACATGAAGACCTaGTCGAAGCCCAGACTCTTCAGCTGGCACTTGCCC +
Preference number: 6 (lower is better)
Translates to: PEHRLSLRYMKT*SKPRLFSWHLP
Trigger: GGGCAAGTGCCAGCTGAAGAGTCTGGGCTTCGACAAGGTCTTCATGTACCTGAGTGACAGCCGGTGCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CAA 90 bp CGGGCTGGGGTCACTACAGACACCCAGTCCCGGTTGTCTCTGTCATaGAAGCCCGAGCACCGGCTGTCACTCAGGTACATGAAGACCTTG +
Preference number: 6 (lower is better)
Translates to: RAGVTTDTQSRLSLS*KPEHRLSLRYMKTL
Trigger: CAAGGTCTTCATGTACCTGAGTGACAGCCGGTGCTCGGGCTTCAATGACAGAGACAACCGGGACTGGGTGTCTGTAGTGACCCCAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CAA 90 bp CCCAGACTCTTCAGCTGGCACTTGCCCAGCGACACCTTCATGTCATaGGCCCCACATTCCAGCCTGTGCTCCAGGAGGGAGATATCAGTG +
Preference number: 6 (lower is better)
Translates to: PRLFSWHLPSDTFMS*APHSSLCSRREISV
Trigger: CACTGATATCTCCCTCCTGGAGCACAGGCTGGAATGTGGGGCCAATGACATGAAGGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CAA 90 bp TCATTGAAGCCCGAGCACCGGCTGTCACTCAGGTACATGAAGACCTaGTCGAAGCCCAGACTCTTCAGCTGGCACTTGCCCAGCGACACC +
Preference number: 6 (lower is better)
Translates to: SLKPEHRLSLRYMKT*SKPRLFSWHLPSDT
Trigger: GGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGGCTTCGACAAGGTCTTCATGTACCTGAGTGACAGCCGGTGCTCGGGCTTCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp CATCCAACATGGTGCCCACGTAGAGAAAAGCCTCAGTaGACAGTGTCACGGAGGAGCCTTGGTAGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: HPTWCPRREKPQ*TVSRRSLGRAA
Trigger: CGCAGCCCTACCAAGGCTCCTCCGTGACACTGTCCACTGAGGCTTTTCTCTACGTGGGCACCATGTTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS CCA 72 bp GCAGTGCAAATCGGGACAGGTCGCCCCCATCCAACATaGTGCCCACGTAGAGAAAAGCCTCAGTGGACAGTG +
Preference number: 6 (lower is better)
Translates to: AVQIGTGRPHPT*CPRREKPQWTV
Trigger: CACTGTCCACTGAGGCTTTTCTCTACGTGGGCACCATGTTGGATGGGGGCGACCTGTCCCGATTTGCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS TCA 72 bp TGGCATTGCTACTGGGTGTGGCATAGCAGTTGGTCATaGGCAGTGCAAATCGGGACAGGTCGCCCCCATCCA +
Preference number: 6 (lower is better)
Translates to: WHCYWVWHSSWS*AVQIGTGRPHP
Trigger: TGGATGGGGGCGACCTGTCCCGATTTGCACTGCTCATGACCAACTGCTATGCCACACCCAGTAGCAATGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS TCA 72 bp CCAGACTTTCAGGAGCCCCAAGCTGCTAAAAGCCCTTaGGACTGTGGCCTGGACACCTTTCCGTGTGATGGG +
Preference number: 6 (lower is better)
Translates to: PDFQEPQAAKSP*DCGLDTFPCDG
Trigger: CCCATCACACGGAAAGGTGTCCAGGCCACAGTCTCAAGGGCTTTTAGCAGCTTGGGGCTCCTGAAAGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS GCA 72 bp GTGCAAATCGGGACAGGTCGCCCCCATCCAACATGGTaGCCACGTAGAGAAAAGCCTCAGTGGACAGTGTCA +
Preference number: 6 (lower is better)
Translates to: VQIGTGRPHPTW*PRREKPQWTVS
Trigger: TGACACTGTCCACTGAGGCTTTTCTCTACGTGGGCACCATGTTGGATGGGGGCGACCTGTCCCGATTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS CAA 72 bp GTCACTACAGACACCCAGTCCCGGTTGTCTCTGTCATaGAAGCCCGAGCACCGGCTGTCACTCAGGTACATG +
Preference number: 6 (lower is better)
Translates to: VTTDTQSRLSLS*KPEHRLSLRYM
Trigger: CATGTACCTGAGTGACAGCCGGTGCTCGGGCTTCAATGACAGAGACAACCGGGACTGGGTGTCTGTAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CAA 90 bp AGGTACATGAAGACCTTGTCGAAGCCCAGACTCTTCAGCTGGCACTaGCCCAGCGACACCTTCATGTCATTGGCCCCACATTCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: RYMKTLSKPRLFSWH*PSDTFMSLAPHSSL
Trigger: CAGGCTGGAATGTGGGGCCAATGACATGAAGGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGGCTTCGACAAGGTCTTCATGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS GCA 72 bp AGACCTTGTCGAAGCCCAGACTCTTCAGCTGGCACTTaGCCAGCGACACCTTCATGTCATTGGCCCCACATT +
Preference number: 6 (lower is better)
Translates to: RPCRSPDSSAGT*PATPSCHWPHI
Trigger: AATGTGGGGCCAATGACATGAAGGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGGCTTCGACAAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp AATCGGCCCTGGGAGGACTCCCCATTCTCCACCACTTaGATAGTTGAGTCTCTAGTGTGTGGGCATCTGTCC +
Preference number: 6 (lower is better)
Translates to: NRPWEDSPFSTT*IVESLVCGHLS
Trigger: GGACAGATGCCCACACACTAGAGACTCAACTATCCAAGTGGTGGAGAATGGGGAGTCCTCCCAGGGCCGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS CCA 72 bp CCAGCAAACCGGAACATCTGGACGGAAAATCGGCCCTaGGAGGACTCCCCATTCTCCACCACTTGGATAGTT +
Preference number: 6 (lower is better)
Translates to: PANRNIWTENRP*EDSPFSTTWIV
Trigger: AACTATCCAAGTGGTGGAGAATGGGGAGTCCTCCCAGGGCCGATTTTCCGTCCAGATGTTCCGGTTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS CAA 72 bp CTCTGCGGAGTCCTCCAACTCCACCTGGCTGGGCAGTaGTACTTTGTTCTTGCTTCTGAGGTGTCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: LCGVLQLHLAGQ*YFVLASEVSVA
Trigger: AGCCACTGACACCTCAGAAGCAAGAACAAAGTACAACTGCCCAGCCAGGTGGAGTTGGAGGACTCCGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000573567.5
ENST00000574195.5
CDS CAA 90 bp CTGGACACCTTTCCGTGTGATGGGACCCAAGTTCAGGACACGGGATaGATCTATGACACTCCCACTTCGGAATCTGGTCCCAGAGCAGGT +
Preference number: 6 (lower is better)
Translates to: LDTFPCDGTQVQDTG*IYDTPTSESGPRAG
Trigger: ACCTGCTCTGGGACCAGATTCCGAAGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAACTTGGGTCCCATCACACGGAAAGGTGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS GCA 72 bp ATCTGCCATTATTCGATTTGCAGTCCTCGTCTATACTaGACTCCTCACACGTCCCCTCCACGGAGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: ICHYSICSPRLY*TPHTSPPRSWG
Trigger: ACCCCAGCTCCGTGGAGGGGACGTGTGAGGAGTGCAGTATAGACGAGGACTGCAAATCGAATAATGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp TACATGAAGACCTTGTCGAAGCCCAGACTCTTCAGCTaGCACTTGCCCAGCGACACCTTCATGTCATTGGCC +
Preference number: 6 (lower is better)
Translates to: YMKTLSKPRLFS*HLPSDTFMSLA
Trigger: GGCCAATGACATGAAGGTGTCGCTGGGCAAGTGCCAGCTGAAGAGTCTGGGCTTCGACAAGGTCTTCATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp TTTCCGCTGTCAGTCACTGAAAAGTCAGGGTCAAGGTaGCCGAGAGAAGCAGAGGCAGCCAGACTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: FPLSVTEKSGSR*PREAEAARLSG
Trigger: TCCTGAAAGTCTGGCTGCCTCTGCTTCTCTCGGCCACCTTGACCCTGACTTTTCAGTGACTGACAGCGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS TCA 72 bp TTCCGTGTGATGGGACCCAAGTTCAGGACACGGGATTaGTCTATGACACTCCCACTTCGGAATCTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: FRVMGPKFRTRD*SMTLPLRNLVP
Trigger: TGGGACCAGATTCCGAAGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAACTTGGGTCCCATCACACGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS CAA 72 bp TTTCCGTGTGATGGGACCCAAGTTCAGGACACGGGATaGATCTATGACACTCCCACTTCGGAATCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: FPCDGTQVQDTG*IYDTPTSESGP
Trigger: GGGACCAGATTCCGAAGTGGGAGTGTCATAGATCAATCCCGTGTCCTGAACTTGGGTCCCATCACACGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570331.1
ENST00000570689.5
CDS TCA 72 bp AGACGGGTTGGCCCTTTGAATTTTTCTCTCTGTCTCTaGTGTCTGGTGTCCTCACCAACATCCCAGTCTTGG +
Preference number: 6 (lower is better)
Translates to: RRVGPLNFSLCL*CLVSSPTSQSW
Trigger: CCAAGACTGGGATGTTGGTGAGGACACCAGACATCAGAGACAGAGAGAAAAATTCAAAGGGCCAACCCGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574195.5
CDS GCA 72 bp TCTGCTCTTCCCGCTACTTCAGGTCTAGATAGCACCTaGCCAAAGGAAAGACGGGTTGGCCCTTTGAATTTT +
Preference number: 6 (lower is better)
Translates to: SALPATSGLDST*PKERRVGPLNF
Trigger: AAAATTCAAAGGGCCAACCCGTCTTTCCTTTGGGCAGGTGCTATCTAGACCTGAAGTAGCGGGAAGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570757.5
ENST00000574195.5
ENST00000576546.1
CDS TCA 72 bp TGTGCCAAACAGGGAGCTAGTCACCATGGAGAACAATaGACATGGCAGTCTGCTCCTTCATGCAACTCACAT +
Preference number: 6 (lower is better)
Translates to: CAKQGASHHGEQ*TWQSAPSCNSH
Trigger: ATGTGAGTTGCATGAAGGAGCAGACTGCCATGTTCATTGTTCTCCATGGTGACTAGCTCCCTGTTTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570972.2
ENST00000576546.1
CDS TCA 72 bp AGACGGGTTGGCCCTTTGAATTTTTCTCTCTGTCTCTaGTGTCTGGTGTCCACTTTACTGAAGGCAGCTTTG +
Preference number: 6 (lower is better)
Translates to: RRVGPLNFSLCL*CLVSTLLKAAL
Trigger: CAAAGCTGCCTTCAGTAAAGTGGACACCAGACATCAGAGACAGAGAGAAAAATTCAAAGGGCCAACCCGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576546.1
CDS CCA 72 bp AGGGAGATATCAGTGATGTTGAAGTCCTGTTTGCACTaGCAGTGCCATCTGCCATTATTCGATTTGCAGTCC +
Preference number: 6 (lower is better)
Translates to: REISVMLKSCLH*QCHLPLFDLQS
Trigger: GGACTGCAAATCGAATAATGGCAGATGGCACTGCCAGTGCAAACAGGACTTCAACATCACTGATATCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp TCAGGTCTAGATAGCACCTCACCAACATCCCAGTCTTaGCTCCCCAATTCTCAGCACATTGCACATTTTGAA +
Preference number: 6 (lower is better)
Translates to: SGLDSTSPTSQS*LPNSQHIAHFE
Trigger: TTCAAAATGTGCAATGTGCTGAGAATTGGGGAGCCAAGACTGGGATGTTGGTGAGGTGCTATCTAGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570972.2
ENST00000576688.2
CDS TCA 72 bp GCCAGATGGAATAGTGTTCTGGACTCACCACTTTACTaGAGGCAGCTTTGGATTTTAACTGATCCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: ARWNSVLDSPLY*RQLWILTDPLP
Trigger: AGGCAGAGGATCAGTTAAAATCCAAAGCTGCCTTCAGTAAAGTGGTGAGTCCAGAACACTATTCCATCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570972.2
ENST00000576688.2
CDS GCA 72 bp ATATCAGTGATGTTGAAGTCCTGTTTGCACTGGCAGTaGCATCTGCCATTATTCGATTTGCAGTCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: ISVMLKSCLHWQ*HLPLFDLQSSS
Trigger: AGACGAGGACTGCAAATCGAATAATGGCAGATGGCACTGCCAGTGCAAACAGGACTTCAACATCACTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396134.6
ENST00000396138.9
ENST00000570689.5
CDS CCA 72 bp GGTCTAGATAGCACTAAAGATCATGAAGCCAATAATTaGCAGAATAATGACTCAAATCCAGGTCTGACCCCA +
Preference number: 6 (lower is better)
Translates to: GLDSTKDHEANN*QNNDSNPGLTP
Trigger: TGGGGTCAGACCTGGATTTGAGTCATTATTCTGCCAATTATTGGCTTCATGATCTTTAGTGCTATCTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571174.5