Pregenerated sensors for UMLILO (Homo sapiens)

Ensembl gene IDs: ENSG00000228277

Ensembl transcript IDs: ENST00000436089.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CAGAGAGTTTTGCATTATGGAAGGCACCACAGTAGCAGATACATTTaGGCTGCTCTATCTCCAGTGTTTGAGAGGAGCCATTTCCAACTT	+
Preference number: 5 (lower is better) Translates to: QRVLHYGRHHSSRYI*AALSPVFERSHFQL Trigger: AAGTTGGAAATGGCTCCTCTCAAACACTGGAGATAGAGCAGCCCAAATGTATCTGCTACTGTGGTGCCTTCCATAATGCAAAACTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436089.1
CDS CCA 90 bp	GTATTCTATGTGAGCAGCTCTTCAGCCTATAGTGAGATTAAGAATTaGCAGGCCTCTGGAATGAAGCAGAATACATTCCCACAGCAAATG	+
Preference number: 5 (lower is better) Translates to: VFYVSSSSAYSEIKN*QASGMKQNTFPQQM Trigger: CATTTGCTGTGGGAATGTATTCTGCTTCATTCCAGAGGCCTGCCAATTCTTAATCTCACTATAGGCTGAAGAGCTGCTCACATAGAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436089.1
CDS CCA 72 bp	TTGCATTATGGAAGGCACCACAGTAGCAGATACATTTaGGCTGCTCTATCTCCAGTGTTTGAGAGGAGCCAT	+
Preference number: 6 (lower is better) Translates to: LHYGRHHSSRYI*AALSPVFERSH Trigger: ATGGCTCCTCTCAAACACTGGAGATAGAGCAGCCCAAATGTATCTGCTACTGTGGTGCCTTCCATAATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436089.1
CDS CCA 72 bp	GTGAGCAGCTCTTCAGCCTATAGTGAGATTAAGAATTaGCAGGCCTCTGGAATGAAGCAGAATACATTCCCA	+
Preference number: 6 (lower is better) Translates to: VSSSSAYSEIKN*QASGMKQNTFP Trigger: TGGGAATGTATTCTGCTTCATTCCAGAGGCCTGCCAATTCTTAATCTCACTATAGGCTGAAGAGCTGCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436089.1
CDS CAA 90 bp	ACAATTTTGGTAGCAGTAGACATATTCTCAGCTCCTCAGAGAGTTTaGCATTATGGAAGGCACCACAGTAGCAGATACATTTGGGCTGCT	+
Preference number: 6 (lower is better) Translates to: TILVAVDIFSAPQRV*HYGRHHSSRYIWAA Trigger: AGCAGCCCAAATGTATCTGCTACTGTGGTGCCTTCCATAATGCAAAACTCTCTGAGGAGCTGAGAATATGTCTACTGCTACCAAAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436089.1
CDS CAA 72 bp	GTAGCAGTAGACATATTCTCAGCTCCTCAGAGAGTTTaGCATTATGGAAGGCACCACAGTAGCAGATACATT	+
Preference number: 6 (lower is better) Translates to: VAVDIFSAPQRV*HYGRHHSSRYI Trigger: AATGTATCTGCTACTGTGGTGCCTTCCATAATGCAAAACTCTCTGAGGAGCTGAGAATATGTCTACTGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436089.1
CDS TCA 72 bp	ACTGGTGAAAATGGAAGTCACTACAAGTATTCTATGTaGGCAGCTCTTCAGCCTATAGTGAGATTAAGAATT	+
Preference number: 6 (lower is better) Translates to: TGENGSHYKYSM*AALQPIVRLRI Trigger: AATTCTTAATCTCACTATAGGCTGAAGAGCTGCTCACATAGAATACTTGTAGTGACTTCCATTTTCACCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436089.1

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