RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ULK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000140474

Ensembl transcript IDs: ENST00000440863.7, ENST00000561725.5, ENST00000562161.5, ENST00000562395.5, ENST00000563301.5, ENST00000564029.5, ENST00000565373.5, ENST00000565790.5, ENST00000565881.5, ENST00000566479.5, ENST00000566631.5, ENST00000568210.5, ENST00000568273.5, ENST00000568667.5, ENST00000568679.1, ENST00000568718.5, ENST00000569437.5, ENST00000569813.5, ENST00000570276.5, ENST00000647587.1

Found 822 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTGGAAGGAGATGCGACGGCTGGGGTCCCGCTCCAGGAGCCGCTaGAGTAGGTCCCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGG +
Preference number: 1 (lower is better)
Translates to: SWKEMRRLGSRSRSR*SRSRQSRESRGRKG
Trigger: CCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCGGGACCCCAGCCGTCGCATCTCCTTCCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR GCA 90 bp AGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTCCAGGGCATCCTaGTCCCCGCCGGCGGCCTCCTCCTTGGCCATGGCAGCTGAAGCC +
Preference number: 1 (lower is better)
Translates to: SSSSPRLCWYRSRAS*SPPAASSLAMAAEA
Trigger: GGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCGGCGGGGAGCAGGATGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCTACTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR CCA 90 bp GGCTGCCCGAAGAGGGCTTCTGTGGAAGGGAGGCAGAGCGGAGGCTaGGAGGGAATGGGTCAAGCCTGGCCTGACGCCCCTCAGCAGGGG +
Preference number: 1 (lower is better)
Translates to: GCPKRASVEGRQSGG*EGMGQAWPDAPQQG
Trigger: CCCCTGCTGAGGGGCGTCAGGCCAGGCTTGACCCATTCCCTCCCAGCCTCCGCTCTGCCTCCCTTCCACAGAAGCCCTCTTCGGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563301.5
3UTR CCA 90 bp CCTCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTaGCTAGTGTGGGGCCCAGAGGGAACGGAGGTGGGAGAGATGAGG +
Preference number: 1 (lower is better)
Translates to: PLPVPGSNSSTRPAL*LVWGPEGTEVGEMR
Trigger: CCTCATCTCTCCCACCTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR TCA 90 bp GGCCTCAGGGTGAGAAGCAGGGAAAAGAGGTCTCACCATACAGGATaGCCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCT +
Preference number: 1 (lower is better)
Translates to: GLRVRSREKRSHHTG*PPWTRGPRGRHTAA
Trigger: AGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGGGGTCATCCTGTATGGTGAGACCTCTTTTCCCTGCTTCTCACCCTGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563301.5
3UTR CCA 90 bp TCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACA +
Preference number: 1 (lower is better)
Translates to: SKKPARQGCSGPLHS*RQPGLVPLCSRWLT
Trigger: TGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR CCA 90 bp GTCTCAGCACTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTG +
Preference number: 1 (lower is better)
Translates to: VSALSIQEACSPGLQ*ATSFLASAWVSAPL
Trigger: CAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAGTGCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR CCA 90 bp TGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATC +
Preference number: 1 (lower is better)
Translates to: CSPGLQWATSFLASA*VSAPLLQMAHICPI
Trigger: GATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR CCA 90 bp GGGGCCCTGGGCCAGCAGTCAGTTTTCATCAGAACCCTTCAGAAGTaGCCCAGAGAGGCCTTGCCTGAGGAAACTGTAGGCCTCAGGGTG +
Preference number: 1 (lower is better)
Translates to: GALGQQSVFIRTLQK*PREALPEETVGLRV
Trigger: CACCCTGAGGCCTACAGTTTCCTCAGGCAAGGCCTCTCTGGGCCACTTCTGAAGGGTTCTGATGAAAACTGACTGCTGGCCCAGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563301.5
3UTR TCA 90 bp GCACCGGGCTTCCCAGCTTTCCCTTGTGAGGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTCCCGACACAGCCTCAGCCTGGTCTT +
Preference number: 1 (lower is better)
Translates to: APGFPAFPCEASEEC*FWNPGFPTQPQPGL
Trigger: AAGACCAGGCTGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGCCTCACAAGGGAAAGCTGGGAAGCCCGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
3UTR CCA 90 bp TGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCATGATG +
Preference number: 1 (lower is better)
Translates to: CMKTRATFSGRILRV*MKRDRSPPAQNSMM
Trigger: CATCATGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR GCA 90 bp AGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAGGTAGATATTGTCACTGTCCCACTG +
Preference number: 1 (lower is better)
Translates to: RQNPAGMDEARQVAP*AKLHDEVDIVTVPL
Trigger: CAGTGGGACAGTGACAATATCTACCTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR TCA 90 bp AGTTTTCATCAGAACCCTTCAGAAGTGGCCCAGAGAGGCCTTGCCTaGGGAAACTGTAGGCCTCAGGGTGAGAAGCAGGGAAAAGAGGTC +
Preference number: 1 (lower is better)
Translates to: SFHQNPSEVAQRGLA*GNCRPQGEKQGKEV
Trigger: GACCTCTTTTCCCTGCTTCTCACCCTGAGGCCTACAGTTTCCTCAGGCAAGGCCTCTCTGGGCCACTTCTGAAGGGTTCTGATGAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563301.5
3UTR GCA 90 bp CATCCACTTCATAGTGCAGGGCAGGTACAAAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAGCTGCTGAATCCCCCTCCTGGTCTT +
Preference number: 1 (lower is better)
Translates to: HPLHSAGQVQRSPEP*SRVIRQLLNPPPGL
Trigger: AAGACCAGGAGGGGGATTCAGCAGCTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCTTTGTACCTGCCCTGCACTATGAAGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR CCA 90 bp TCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTCTACTGCACACCAGCACCGG +
Preference number: 1 (lower is better)
Translates to: SPPMPCSDFSWLHTL*LPLHECPSTAHQHR
Trigger: CCGGTGCTGGTGTGCAGTAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
3UTR GCA 90 bp AATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGCTACCAC +
Preference number: 1 (lower is better)
Translates to: NALEDLNLREEVLHR*LVQTFLGYTLYGYH
Trigger: GTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR TCA 90 bp TTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGCAGGAATTGCAGGGCGCTAGCTAAT +
Preference number: 1 (lower is better)
Translates to: FSKELSRMFCGFRSR*EIFRSCRNCRALAN
Trigger: ATTAGCTAGCGCCCTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp CGGCTGGGGTCCCGCTCCAGGAGCCGCTGCAGTAGGTCCCGGCAGTCTCGGGAGGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 2 (lower is better)
Translates to: RLGSRSRSRCSRSRQSREGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...CTCCCGAGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCGGGACCCCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGCGCTGTGGCTAGTGTaGGGCCCAGAGGGAACGGAG +
Preference number: 2 (lower is better)
Translates to: RAPRRQGRPRSGWPRGHWALWLV*GPEGTE
Trigger: CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGC...CCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 2 (lower is better)
Translates to: RAPRRQGRPRSGWPRGHWASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...CCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR TCA 90 bp GCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTCCCCACTGGGCATGTGCTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: ACTTRAVARPRLSPLGMCSCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...GCACATGCCCAGTGGGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp AGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGCGGAGGTGGGAGAGATaGGGACCAAGGAACCCTCCT +
Preference number: 2 (lower is better)
Translates to: RAPRRQGRPRSGWPRGHWRRWER*GPRNPP
Trigger: AGGAGGGTTCCTTGGTCCTCATCTCTCCCACCTCCG...CCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp AACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGAGCCTGCGGGGGCCCCTTaGCCTCTTCTCGGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: NSSTRPALWLVWGPEGTEPAGAP*PLLGAK
Trigger: TTTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGG...CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CCCCTCCTGGTCTTTCTTCACAGCCTGCACCACCAGGGCGGTTGCTCGCCCCAGGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLLVFLHSLHHQGGCSPQEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...CTGGGGCGAGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGACCAGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GCTAGGAGGCGTGGCTTGTCCCGGGCCATCTCTCTGAGCAGGTCTCGGGCAGAGACGCGGGCGTCATACTaGCGCTGGCACACCATCTCG +
Preference number: 2 (lower is better)
Translates to: ARRRGLSRAISLSRSRAETRASY*RWHTIS
Trigger: CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGT...CTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCCGAGTGTCCTTCTACTaGACACCAGCACCGGGCTTC +
Preference number: 2 (lower is better)
Translates to: APRRQGRPRSGWPRGHWVRVSFY*TPAPGF
Trigger: GAAGCCCGGTGCTGGTGTGCAGTAGAAGGACACTCG...GACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR TCA 90 bp GATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCGAGGGGAGGGTGGTCCCTaGGGGGTGTTGGAGTGCCCC +
Preference number: 2 (lower is better)
Translates to: DRGLHAPKRTGTGPSNHRGEGGP*GVLECP
Trigger: GGGGCACTCCAACACCCCTCAGGGACCACCCTCCCC...TCGGTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCGGGGAGGGTGGTCCCTaGGGGGTGTTGGAGTGCCCC +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVGEGGP*GVLECP
Trigger: GGGGCACTCCAACACCCCTCAGGGACCACCCTCCCC...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTTGGGTTCTGTGGGGCTaGGTGCATACTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCWVLWG*VHTVGR
Trigger: CCTCCCCACAGTATGCACTCAGCCCCACAGAACCCA...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp AACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGAGCCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 2 (lower is better)
Translates to: NSSTRPALWLVWGPEGTEPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGGGGCACAGCTGCCTaGTGGCAGGGCGAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSRGTAA*WQGEGK
Trigger: CTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCCCCT...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CCAGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: PGLHGGRAGLEVGGLEGTGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...AGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGGCACAGCTGCCTGCTaGCAGGGCGAGGGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: RAGLEVGGLEGTGSDCLQGTAAC*QGEGKH
Trigger: GTGCTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCC...TTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTGCGCTGTGGCTAGTGTaGGGCCCAGAGGGAACGGAG +
Preference number: 2 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPALWLV*GPEGTE
Trigger: CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGC...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGACCAAGGAACCCTCCTaGGTGCTCCCTAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: RSLLARAAVGHFILGVSLTKEPS*VLPRPG
Trigger: CCCTGGCCTAGGGAGCACTCAGGAGGGTTCCTTGGT...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp GAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCCACCGCAAGGGGAGCTCGATaGCCCGGTTGCTACGGATCT +
Preference number: 2 (lower is better)
Translates to: EEETMALSSSARDTYCPTARGAR*PGCYGS
Trigger: AGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGC...GGTGGGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGAGGGGCACAGCTGCCTaGTGGCAGGGCGAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWRGTAA*WQGEGK
Trigger: CTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCCCCT...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGAGCTCCCCCAGGCTGTaGTGGTACAGGTCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GLQWATSFLASAWVSAPLSSPRL*WYRSRA
Trigger: TGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCT...CAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TCCCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 2 (lower is better)
Translates to: SRQSRESRGRKGSSMTRLPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...CAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp ACCAAGATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGGGCACAGCTGCCTGCTaGCAGGGCGAGGGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: TKMAGRCEFPERLVGSVGGTAAC*QGEGKH
Trigger: GTGCTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCC...CCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATCTTGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTCGGAGGTGGGAGAGATaGGGACCAAGGAACCCTCCT +
Preference number: 2 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPRRWER*GPRNPP
Trigger: AGGAGGGTTCCTTGGTCCTCATCTCTCCCACCTCCG...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp GCTCCGCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTCCAGGGCTTCATACAGGATaGCCCCCATGGACCAGAGGT +
Preference number: 2 (lower is better)
Translates to: APLPATAVAPPGCAGTGPGLHTG*PPWTRG
Trigger: ACCTCTGGTCCATGGGGGTCATCCTGTATGAAGCCC...TGGACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGCGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCAAAGGGGAAAGAGCTTaGCCAGGGCTCCACGGCGGC +
Preference number: 2 (lower is better)
Translates to: LQWATSFLASAWVSAPLLKGERA*PGLHGG
Trigger: GCCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTT...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 2 (lower is better)
Translates to: LQWATSFLASAWVSAPLLEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAAAGAGGAGCTGAGTTaGAATAAGGGGTCCCGGGAA +
Preference number: 2 (lower is better)
Translates to: APRRQGRPRSGWPRGHWVKEELS*NKGSRE
Trigger: TTCCCGGGACCCCTTATTCCAACTCAGCTCCTCTTT...GACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGAGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 2 (lower is better)
Translates to: GELDDPVATDLLFQLRERASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...TCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GGGGCTCCGCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTTCAGCAGGGCCTGATTaGAAGAGGAGACGATGGCCT +
Preference number: 2 (lower is better)
Translates to: GAPLPATAVAPPGCAGTGSAGPD*KRRRWP
Trigger: AGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA...ACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGCGGAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR CAA 90 bp ATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCAC +
Preference number: 2 (lower is better)
Translates to: IQEACSPGLQWATSF*ASAWVSAPLLQMAH
Trigger: GTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTGATGGCGGGCAGGTGTaGGTTCCCAGAAAGACTGGT +
Preference number: 2 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPDGGQV*VPRKTG
Trigger: ACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATC...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCAGGAGACGATGGCCTTaGGCTCCTCAGCCCGGGACA +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVRRRWP*APQPGT
Trigger: TGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCT...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CCCCTCCTGGTCTTTCTTCACAGCCTGCACCACCAGGGCGGTTGCTCGCCCCAGCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: PLLVFLHSLHHQGGCSPQRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...CTGGGGCGAGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGACCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CTGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTGAACCTCAGTGTGAAGAGGTCCAGGGCATCCTaGTCCCCGCCGGCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: LLLQVFSSGHEVLNLSVKRSRAS*SPPAAS
Trigger: GGAGGCCGCCGGCGGGGAGCAGGATGCCCTGGACCT...CTTCACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CCTGGTCTTTCTTCACAGCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: PGLSSQPAPPGRLLAPDSGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...AGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGATACTGTGGGGAGGGTaGTCCCTGAGGGGTGTTGGA +
Preference number: 2 (lower is better)
Translates to: SPCPRLKLQHKARAVASVILWGG*SLRGVG
Trigger: TCCAACACCCCTCAGGGACCACCCTCCCCACAGTAT...CACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTGCCCCATTGAAGAGATaGGGAGACCCAGGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPAPLKR*GDPGPE
Trigger: TTCTGGGCCTGGGTCTCCCCATCTCTTCAATGGGGC...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GGGGCTCCGCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: GAPLPATAVAPPGCAGTGSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...ACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGCGGAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCGGCGGCCTCCTCCTTaGCCATGGCAGCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: FLASAWVSAPLLQMAHICRRPPP*PWQLKP
Trigger: TGGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCG...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 2 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR TCA 90 bp CCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGAGACCCAACCAAGGAACCCTCCTaGGTGCTCCCTAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PMLWAVKVSAPLKRWGDPTKEPS*VLPRPG
Trigger: CCCTGGCCTAGGGAGCACTCAGGAGGGTTCCTTGGT...TGGGTCTCCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 2 (lower is better)
Translates to: LRQNPAGMDEARQVAPCAALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...TGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CCA 90 bp GGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: GLQWATSFLASAWVSAPLGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...CAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: PSKKPARQGCSGPLHSWRGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...ACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGCCTAAAGTACCAAGATaGCGGGCAGGTGTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: SNSSTRPALWLVWGPEGTPKVPR*RAGVSS
Trigger: GGAACTCACACCTGCCCGCCATCTTGGTACTTTAGG...CGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCAGGCCTAGAAGTGGGTaGCCTAGAGGGCACTGGGTC +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVRPRSG*PRGHWV
Trigger: GACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCT...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GACCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: DPHGPEVHAGVILPLAHHFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...ATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTGCTGAATCCCCCTCCTaGTCTTTCTTCACAGCCTGC +
Preference number: 2 (lower is better)
Translates to: PGLQWATSFLASAWVSAPAESPS*SFFTAC
Trigger: GCAGGCTGTGAAGAAAGACCAGGAGGGGGATTCAGC...AGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp CTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 2 (lower is better)
Translates to: LANCCMKTRATFSGRILRGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...CCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp CCTCATCTTGACCTGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTGAACCCCGGGCCATCTCTCTaGGCAGGTCTCGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: PHLDLLLQVFSSGHEVLNPGPSL*AGLGQR
Trigger: CCTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGG...GTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAGGTCAAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp ACCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: TPMDQRSTRASYCRWHTILSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...GATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp AGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: RGRKGSSMTRLLRIFSSSASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...GCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR GCA 90 bp CGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 2 (lower is better)
Translates to: RATFSGRILRVWMKRDRSGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp AGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 2 (lower is better)
Translates to: RAGLEVGGLEGTGSDCLQGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...TTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCTTACACTCAGCCTCCTaGAGGGAGGACAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSLHSAS*REDRQL
Trigger: GAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAA...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GGCCTGATTGGAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTAAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 2 (lower is better)
Translates to: GLIGRGDDGLELLSPGHVRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...TACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTCCAATCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CCGCTGGGCATCCACTTCATAGTGCAGGGCAGGTACAAAGAAGTCCAGAGCCTTGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLGIHFIVQGRYKEVQSLEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...AAGGCTCTGGACTTCTTTGTACCTGCCCTGCACTATGAAGTGGATGCCCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCGCTCCAGGAGCCGCTaGAGTAGGTCCCGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: ARATNRFRQSLFVQGVSFRSRSR*SRSRQS
Trigger: AGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCG...GAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGGTACTGCCCCACCTTTaGCTTAATTGCCTCCTTCCG +
Preference number: 2 (lower is better)
Translates to: GLQWATSFLASAWVSAPLVLPHL*LNCLLP
Trigger: CGGAAGGAGGCAATTAAGGCAAAGGTGGGGCAGTAC...CAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 2 (lower is better)
Translates to: RSLLARAAVGHFILGVSLPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp ATTGGAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: IGRGDDGLELLSPGHVLPGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...GGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTCCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGAGACCCATCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 2 (lower is better)
Translates to: PMLWAVKVSAPLKRWGDPSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...TGGGTCTCCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp ACCAAGATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: TKMAGRCEFPERLVGSVGGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...CCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATCTTGGT
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCATACTGTGGGGAGGGTaGTCCCTGAGGGGTGTTGGA +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVILWGG*SLRGVG
Trigger: TCCAACACCCCTCAGGGACCACCCTCCCCACAGTAT...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTGCTGAGTGCATACTGTaGGGAGGGTGGTCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: FLASAWVSAPLLQMAHICAECIL*GGWSLR
Trigger: CCTCAGGGACCACCCTCCCCACAGTATGCACTCAGC...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCATCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: LRQNPAGMDEARQVAPCASASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...TGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp ACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 2 (lower is better)
Translates to: TFSGRILRVWMKRDRSPPGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...AGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR TCA 90 bp CTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 2 (lower is better)
Translates to: LRQNPAGMDEARQVAPCAGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...TGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCGCAAGGGGAGCTCGATaGCCCGGTTGCTACGGATCT +
Preference number: 2 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFARGAR*PGCYGS
Trigger: AGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGC...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 2 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGCCTGCGGGGGCCCCTTaGCCTCTTCTCGGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: VSAPLLQMAHICPIILLGPAGAP*PLLGAK
Trigger: TTTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGG...CCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGACCTGGAGGCAAAGGGGAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 2 (lower is better)
Translates to: RLLRIFSSSSENDLEAKGRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...CCCCTTTGCCTCCAGGTCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 2 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 2 (lower is better)
Translates to: VHPRSLLARAAVGHFILGPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...GCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCGAGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: DRGLHAPKRTGTGPSNHRGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...TCGGTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CCGCTGGGCATCCACTTCATAGTGCAGGGCAGGTACAAAGAAGTCCAGAGCCTTTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 2 (lower is better)
Translates to: PLGIHFIVQGRYKEVQSLSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...AAGGCTCTGGACTTCTTTGTACCTGCCCTGCACTATGAAGTGGATGCCCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp ACTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGCCCCATTGAAGAGATaGGGAGACCCAGGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: TVHPRSLLARAAVGHFILAPLKR*GDPGPE
Trigger: TTCTGGGCCTGGGTCTCCCCATCTCTTCAATGGGGC...AAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: SPCPRLKLQHKARAVASVFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...CACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR CCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCTGATTCTGGAATCCTaGCTTCCCGACACAGCCTCA +
Preference number: 2 (lower is better)
Translates to: LQWATSFLASAWVSAPLLLILES*LPDTAS
Trigger: TGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAG...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR TCA 90 bp GTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 2 (lower is better)
Translates to: VSAPLLQMAHICPIILLGGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...CCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp GAAGGGTGCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTTGGGTTCTGTGGGGCTaGGTGCATACTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: EGCKSYEQIPTVPLCPGCWVLWG*VHTVGR
Trigger: CCTCCCCACAGTATGCACTCAGCCCCACAGAACCCA...ACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGCACCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR TCA 90 bp CTTCAAGTATTCAGCTCGGGCCATGAGGTTCTGAACCTCAGTGTGAAGCAGCTCACCAAGGAACCCTCCTaGGTGCTCCCTAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LQVFSSGHEVLNLSVKQLTKEPS*VLPRPG
Trigger: CCCTGGCCTAGGGAGCACTCAGGAGGGTTCCTTGGT...GAGCTGCTTCACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR TCA 90 bp ATTGGAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 2 (lower is better)
Translates to: IGRGDDGLELLSPGHVLPGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...GGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp GATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCGAATTCAGCTCGGGCCATaGGGTTCTGAACCTCAGTGT +
Preference number: 2 (lower is better)
Translates to: DRGLHAPKRTGTGPSNHRIQLGP*GSEPQC
Trigger: ACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAAT...TCGGTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 2 (lower is better)
Translates to: FLASAWVSAPLLQMAHICVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CTTGAGCTCCTCAGCCCGGGACACGTACTGCCCCACCTTTGCCTTAATTGCCTCAGTGCCCCATTCCAGTaGAAAGAGGAGCTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: LELLSPGHVLPHLCLNCLSAPFQ*KEELSW
Trigger: CCAACTCAGCTCCTCTTTGCACTGGAATGGGGCACT...GAGGCAATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR GCA 90 bp TGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 2 (lower is better)
Translates to: CCMKTRATFSGRILRVWMALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...CATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR GCA 90 bp GCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 2 (lower is better)
Translates to: ARQGCSGPLHSWRQPGLVEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCACCTTTGCCTTAATTaGCTCCTTCCGCTGGGCATC +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVHLCLN*LLPLGI
Trigger: GATGCCCAGCGGAAGGAGGCAATTAAGGCAAAGGTG...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CTTGAGCTCCTCAGCCCGGGACACGTACTGCCCCACCTTTGCCTTAATTGCCTCGTACTGCCCCACCTTTaGCTTAATTGCCTCCTTCCG +
Preference number: 2 (lower is better)
Translates to: LELLSPGHVLPHLCLNCLVLPHL*LNCLLP
Trigger: CGGAAGGAGGCAATTAAGGCAAAGGTGGGGCAGTAC...GAGGCAATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 2 (lower is better)
Translates to: CCMKTRATFSGRILRVWMRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...CATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CCA 90 bp CCGCTGGGCATCCACTTCATAGTGCAGGGCAGGTACAAAGAAGTCCAGAGCCTTTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: PLGIHFIVQGRYKEVQSLFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...AAGGCTCTGGACTTCTTTGTACCTGCCCTGCACTATGAAGTGGATGCCCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: HVLLIPRGHVLCETKVCQFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGGGCGCTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 2 (lower is better)
Translates to: VASDPGERYSVHAGIAGRSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...GCGCCCTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCCTAAAGTACCAAGATaGCGGGCAGGTGTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVPKVPR*RAGVSS
Trigger: GGAACTCACACCTGCCCGCCATCTTGGTACTTTAGG...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AATGATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACTGGCCTAGAGGGCACTaGGTCAGACTGTCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: NDRGLHAPKRTGTGPSNHWPRGH*VRLSPS
Trigger: GCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCA...GTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGTAACAAAGGTCTCATaGAAGAAGTGCTGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: RSLLARAAVGHFILGVSLVTKVS*KKCCSP
Trigger: GGGAGAACAGCACTTCTTTCATGAGACCTTTGTTAC...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000440863.7
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp AGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 2 (lower is better)
Translates to: STCFSSHGDMCCAKPKSAGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...GGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 2 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 2 (lower is better)
Translates to: GARASHPTGTCVVRNQSLALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...CAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000565373.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 2 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp AGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 2 (lower is better)
Translates to: RALANCCMKTRATFSGRIRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...GATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CCA 90 bp CACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: HVLLIPRGHVLCETKVCQGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTCCTCCTCCTTGGCCATaGCAGCTGAAGCCACTTCCA +
Preference number: 2 (lower is better)
Translates to: IQHSHQTICGVQSNLREAPPPWP*QLKPLP
Trigger: TGGAAGTGGCTTCAGCTGCCATGGCCAAGGAGGAGG...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGTGCCTCAGCAGGGCCTaGTTGGAAGAGGAGACGATG +
Preference number: 2 (lower is better)
Translates to: SIQHSHQTICGVQSNLRECLSRA*LEEETM
Trigger: CATCGTCTCCTCTTCCAATCAGGCCCTGCTGAGGCA...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp TTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LLHEDTRHLLRQNPAGMDASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...ATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR GCA 90 bp AATGATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACAGTGCCCCATTCCAGTaGAAAGAGGAGCTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: NDRGLHAPKRTGTGPSNHSAPFQ*KEELSW
Trigger: CCAACTCAGCTCCTCTTTGCACTGGAATGGGGCACT...GTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 2 (lower is better)
Translates to: RATFSGRILRVWMKRDRSEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR GCA 90 bp CGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 2 (lower is better)
Translates to: RASHPTGTCVVRNQSLPVRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...AACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LANCCMKTRATFSGRILRRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...CCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATTTCTTTCTTCACAGCCTaGACCACCAGGGCGGTTGCT +
Preference number: 2 (lower is better)
Translates to: FTLSLLQGGQTALAQGSISFFTA*TTRAVA
Trigger: AGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGA...AATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR CCA 90 bp ATAAGTGCCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: ISAHAVGCEGISPIEEMGGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...CCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGGCACTTAT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp ACCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 2 (lower is better)
Translates to: TPMDQRSTRASYCRWHTICSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...GATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GCTGGGCATCCACTTCATAGTGCAGGGCAGGTACAAAGAAGTCCAGAGCCTTGCTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: AGHPLHSAGQVQRSPEPCSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...GCAAGGCTCTGGACTTCTTTGTACCTGCCCTGCACTATGAAGTGGATGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR CAA 90 bp CAGTCAGTTTTCATCAGAACCCTTCAGAAGTGGCCCAGAGAGGCCTaGCCTGAGGAAACTGTAGGCCTCAGGGTGAGAAGCAGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: QSVFIRTLQKWPREA*PEETVGLRVRSREK
Trigger: CTTTTCCCTGCTTCTCACCCTGAGGCCTACAGTTTCCTCAGGCAAGGCCTCTCTGGGCCACTTCTGAAGGGTTCTGATGAAAACTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563301.5
3UTR-3UTR TCA 90 bp AATGATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 2 (lower is better)
Translates to: NDRGLHAPKRTGTGPSNHGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...GTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CCAATCATTCTTCTAGGGTCACTGAAGGGTGCAAGAGCTACGAACAGATTCCGACCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 2 (lower is better)
Translates to: PIILLGSLKGARATNRFRPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...TCGGAATCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCTAGAAGAATGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 2 (lower is better)
Translates to: SIQHSHQTICGVQSNLREVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGAGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 2 (lower is better)
Translates to: GELDDPVATDLLFQLREREVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...TCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 2 (lower is better)
Translates to: VSAPLLQMAHICPIILLGALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...CCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp ACTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 2 (lower is better)
Translates to: TVHPRSLLARAAVGHFILEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...AAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: IQHSHQTICGVQSNLREARGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp TGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGTCACTAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 2 (lower is better)
Translates to: CPSAPDGSHLSNHSSRVTRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...AGTGACCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 2 (lower is better)
Translates to: LPSSIQHSHQTICGVQSNPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...GTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 2 (lower is better)
Translates to: CTMWGCRMPLRISISVRRPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAATTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: LHEDTRHLLRQNPAGMDEFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...TTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGTCAGCAGGGCCTGATTaGAAGAGGAGACGATGGCCT +
Preference number: 2 (lower is better)
Translates to: SIQHSHQTICGVQSNLRESAGPD*KRRRWP
Trigger: AGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 2 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR TCA 90 bp AATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 2 (lower is better)
Translates to: NLREEVLHRCLVQTFLGYGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...GTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR TCA 90 bp CCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 2 (lower is better)
Translates to: PVLGGASPRSSVECSVASGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...TGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp ACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 2 (lower is better)
Translates to: TVPLKVFQLHNVGMSNALGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...AAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR TCA 90 bp AGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCTCTCAGGCAGAATCCTaGAAGTCTTTCAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: SYEQIPTVPLCPGCQLPSSQAES*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGGATTCTGCCTGAGA...GCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568273.5
3UTR-3UTR TCA 90 bp GAAGGGTGCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 2 (lower is better)
Translates to: EGCKSYEQIPTVPLCPGCGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...ACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGCACCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp CGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: RMPLRISISVRRFSTDALLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...CAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR TCA 90 bp TTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: LLHEDTRHLLRQNPAGMDLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...ATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR TCA 90 bp AATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: NCCMKTRATFSGRILRVWLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...CCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR GCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 2 (lower is better)
Translates to: SLPVLGGASPRSSVECSVGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp ATCTGTCCAATCATTCTTCTAGGGTCACTGAAGGGTGCAAGAGCTACGAACAGACCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 2 (lower is better)
Translates to: ICPIILLGSLKGARATNRPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...TCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCTAGAAGAATGATTGGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp GTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGAGTGCCCCATTCCAGTaGAAAGAGGAGCTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: VSAPLLQMAHICPIILLGSAPFQ*KEELSW
Trigger: CCAACTCAGCTCCTCTTTGCACTGGAATGGGGCACT...CCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp CACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 2 (lower is better)
Translates to: HVLLIPRGHVLCETKVCQEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AACCAAAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: NQSLPVLGGASPRSSVECFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...ACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: SCTMWGCRMPLRISISVRFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...CCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR GCA 90 bp AGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 2 (lower is better)
Translates to: RALANCCMKTRATFSGRIEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...GATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR GCA 90 bp TTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTAGGCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: FSSHGDMCCAKPKSASFRRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...CCTAAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAG +
Preference number: 2 (lower is better)
Translates to: IQHSHQTICGVQSNLREARSPEP*SRVIRQ
Trigger: CTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCT...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp TGTTCTGTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: CSVASDPGERYSVHAGIAGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...TGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: SLPVLGGASPRSSVECSVSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000562161.5
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp CTCCATGATGAGGTAGATATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 2 (lower is better)
Translates to: LHDEVDIVTVPLKVFQLHGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...GTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATATCTACCTCATCATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CCA 90 bp GATATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGCTGATTCTGGAATCCTaGCTTCCCGACACAGCCTCA +
Preference number: 2 (lower is better)
Translates to: DIVTVPLKVFQLHNVGMSLILES*LPDTAS
Trigger: TGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAG...CGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
3UTR CAA 90 bp ATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTaGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTAC +
Preference number: 2 (lower is better)
Translates to: ISVRRFSTDALFRLF*ATHFMATTSRVSFY
Trigger: GTAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
3UTR CAA 90 bp CCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCTACACACTTTATGGCTACCACTTCA +
Preference number: 2 (lower is better)
Translates to: PLRISISVRRFSTDA*FRLFLATHFMATTS
Trigger: TGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565790.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CCA 90 bp GTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGATTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: VLGGASPRSSVECSVASDFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...ATCTGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp GTTCTGTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: VLWLQIQVRDIPFMQELQFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...CTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR TCA 90 bp CTCTCAAATACATTCTTTTCCAGGTTAAATTCACTTTGTCCTCATAAGTGCCCAGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 2 (lower is better)
Translates to: LSNTFFSRLNSLCPHKCPGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...TGGGCACTTATGAGGACAAAGTGAATTTAACCTGGAAAAGAATGTATTTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR GCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SLPVLGGASPRSSVECSVEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp CTCTCAAATACATTCTTTTCCAGGTTAAATTCACTTTGTCCTCATAAGTGCCCATCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 2 (lower is better)
Translates to: LSNTFFSRLNSLCPHKCPSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...TGGGCACTTATGAGGACAAAGTGAATTTAACCTGGAAAAGAATGTATTTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 2 (lower is better)
Translates to: SCTMWGCRMPLRISISVRCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...CCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CCA 90 bp ATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 2 (lower is better)
Translates to: MPLRISISVRRFSTDALFCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...GAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CCA 90 bp TGTTCTGTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCATGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 2 (lower is better)
Translates to: CSVASDPGERYSVHAGIAWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...TGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565790.5
ENST00000647587.1
3UTR-3UTR CCA 90 bp AAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 2 (lower is better)
Translates to: KSASFRWGFSKELSRMFCCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...ACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR CCA 72 bp GTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTaGCTAGTGTGGGGCCCAGAGGGAACGGAGGTGGGA +
Preference number: 3 (lower is better)
Translates to: VPGSNSSTRPAL*LVWGPEGTEVG
Trigger: TCCCACCTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR CCA 72 bp AGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTaGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGC +
Preference number: 3 (lower is better)
Translates to: RAPRRQGRPRSG*PRGHWVRLSPS
Trigger: GCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp AGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCACCACCAGGGCGGTaGCTCGCCCCAGACTCTCCC +
Preference number: 3 (lower is better)
Translates to: RAGLEVGGLEGTGSDCLQAPPGR*LAPDSP
Trigger: GGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGC...TTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647587.1
3UTR-3UTR CAA 90 bp CCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 3 (lower is better)
Translates to: PAVSGEQGPQGELDDPVAWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...AGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp GATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCGACCCTGCGGGGGCCCCTaGCCCTCTTCTCGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: DRGLHAPKRTGTGPSNHRPCGGP*PSSRSQ
Trigger: TTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGGG...TCGGTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR CCA 72 bp CCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: PARQGCSGPLHS*RQPGLVPLCSR
Trigger: TCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp CCAGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGCAGGAACAAGGCTaGGGCTTCTTAAACCCCAAA +
Preference number: 3 (lower is better)
Translates to: PGLHGGRAGLEVGGLEGTGQEQG*GFLNPK
Trigger: TTTGGGGTTTAAGAAGCCCAAGCCTTGTTCCTGCCC...AGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp CAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 3 (lower is better)
Translates to: QRSTRASYCRWHTISGAMPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...CATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp GCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 3 (lower is better)
Translates to: AVSGEQGPQGELDDPVATPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...CGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 3 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp GCTAGGAGGCGTGGCTTGTCCCGGGCCATCTCTCTGAGCAGGTCTCGGGCAGAGAGCTCGATGACCCGGTaGCTACGGATCTTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: ARRRGLSRAISLSRSRAESSMTR*LRIFSS
Trigger: GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCT...CTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR TCA 72 bp TCAGCAGGGCCTGATTGGAAGAGGAGACGATGGCCTTaGGCTCCTCAGCCCGGGACACGTACTGCCCCACCT +
Preference number: 3 (lower is better)
Translates to: SAGPDWKRRRWP*APQPGTRTAPP
Trigger: AGGTGGGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR CCA 72 bp AAGACTGGTGGGTTCTGTGGGGCTGAGTGCATACTGTaGGGAGGGTGGTCCCTGAGGGGTGTTGGAGTGCCC +
Preference number: 3 (lower is better)
Translates to: KTGGFCGAECIL*GGWSLRGVGVP
Trigger: GGGCACTCCAACACCCCTCAGGGACCACCCTCCCCACAGTATGCACTCAGCCCCACAGAACCCACCAGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp CCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGAGACCCAGAAAGGGGAAAGAGCTaGCCCAGGGCTCCACGGCGG +
Preference number: 3 (lower is better)
Translates to: PMLWAVKVSAPLKRWGDPERGKS*PRAPRR
Trigger: CCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTTC...TGGGTCTCCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGTCCGACAGTCCCTCTTaGTCCAGGGTGTCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: RSLLARAAVGHFILGVSLSDSPS*SRVSAS
Trigger: GGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGA...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR TCA 72 bp GTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGCTaGGTGCATACTGTGGGGAGGGTGGTCCCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: VSSQKDWWVLWG*VHTVGRVVPEG
Trigger: CCCCTCAGGGACCACCCTCCCCACAGTATGCACTCAGCCCCACAGAACCCACCAGTCTTTCTGGGAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR TCA 72 bp ACGGAGGTGGGAGAGATGAGGACCAAGGAACCCTCCTaGGTGCTCCCTAGGCCAGGGCAGGAACAAGGCTTG +
Preference number: 3 (lower is better)
Translates to: TEVGEMRTKEPS*VLPRPGQEQGL
Trigger: CAAGCCTTGTTCCTGCCCTGGCCTAGGGAGCACTCAGGAGGGTTCCTTGGTCCTCATCTCTCCCACCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR TCA 72 bp GCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCA +
Preference number: 3 (lower is better)
Translates to: APPSQAESCGYG*SETGRPLRKTP
Trigger: TGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR CCA 72 bp GGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATC +
Preference number: 3 (lower is better)
Translates to: GLQWATSFLASA*VSAPLLQMAHI
Trigger: GATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp CAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: QRSTRASYCRWHTISGAMFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...CATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp ACTTCCAGGGCAGCTAGGAGGCGTGGCTTGTCCCGGGCCATCTCTCTGAGCAGGGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 3 (lower is better)
Translates to: TSRAARRRGLSRAISLSRGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...CCTGCTCAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGCTGCCCTGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp AGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCGAGGAGACGATGGCCTaGAGCTCCTCAGCCCGGGAC +
Preference number: 3 (lower is better)
Translates to: SYEQIPTVPLCPGCQLPSEETMA*SSSARD
Trigger: GTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTC...GCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp CGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGACCTGGAGGCAAAGGGGTGGCCCAGAGAGGCCTaGCCTGAGGAAACTGTAGGC +
Preference number: 3 (lower is better)
Translates to: RLLRIFSSSSENDLEAKGWPREA*PEETVG
Trigger: GCCTACAGTTTCCTCAGGCAAGGCCTCTCTGGGCCA...CCCCTTTGCCTCCAGGTCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563301.5
3UTR CCA 72 bp CTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGT +
Preference number: 3 (lower is better)
Translates to: LSIQEACSPGLQ*ATSFLASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTGAAAGGGGAAAGAGCTaGCCCAGGGCTCCACGGCGG +
Preference number: 3 (lower is better)
Translates to: IQHSHQTICGVQSNLREAERGKS*PRAPRR
Trigger: CCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTTC...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp ATAAGTGCCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGGAAAGGGGAAAGAGCTaGCCCAGGGCTCCACGGCGG +
Preference number: 3 (lower is better)
Translates to: ISAHAVGCEGISPIEEMGERGKS*PRAPRR
Trigger: CCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTTC...CCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGGCACTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp AGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 3 (lower is better)
Translates to: SRGRKGSSMTRLLRIFSSGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp CTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGTCCGACAGTCCCTCTTaGTCCAGGGTGTCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: LSIQEACSPGLQWATSFLSDSPS*SRVSAS
Trigger: GGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGA...CAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 3 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGAGCTCGATGACCCGGTaGCTACGGATCTTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWSSMTR*LRIFSS
Trigger: GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCT...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp CCTCATCTTGACCTGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTGAACGCTAGGAGGCGTGGCTaGTCCCGGGCCATCTCTCTG +
Preference number: 3 (lower is better)
Translates to: PHLDLLLQVFSSGHEVLNARRRG*SRAISL
Trigger: CAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC...GTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAGGTCAAGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000647587.1
3UTR TCA 72 bp GTGAGAAGCAGGGAAAAGAGGTCTCACCATACAGGATaGCCCCCATGGACCAGAGGTCCACGCGGGCGTCAT +
Preference number: 3 (lower is better)
Translates to: VRSREKRSHHTG*PPWTRGPRGRH
Trigger: ATGACGCCCGCGTGGACCTCTGGTCCATGGGGGTCATCCTGTATGGTGAGACCTCTTTTCCCTGCTTCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563301.5
3UTR-3UTR CAA 90 bp GATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCGAGGGCAGGAACAAGGCTaGGGCTTCTTAAACCCCAAA +
Preference number: 3 (lower is better)
Translates to: DRGLHAPKRTGTGPSNHRGQEQG*GFLNPK
Trigger: TTTGGGGTTTAAGAAGCCCAAGCCTTGTTCCTGCCC...TCGGTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp CCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCATGATGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 3 (lower is better)
Translates to: PAGMDEARQVAPCAKLHDGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...ATCATGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CAA 90 bp GCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCGAGATTCCCTCATCTaGACCTGCTCCTTCAAGTAT +
Preference number: 3 (lower is better)
Translates to: ARQGCSGPLHSWRQPGLVRDSLI*TCSFKY
Trigger: ATACTTGAAGGAGCAGGTCAAGATGAGGGAATCTCG...CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp AGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 3 (lower is better)
Translates to: STCFSSHGDMCCAKPKSAPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...GGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR CCA 72 bp GGCCAGCAGTCAGTTTTCATCAGAACCCTTCAGAAGTaGCCCAGAGAGGCCTTGCCTGAGGAAACTGTAGGC +
Preference number: 3 (lower is better)
Translates to: GQQSVFIRTLQK*PREALPEETVG
Trigger: GCCTACAGTTTCCTCAGGCAAGGCCTCTCTGGGCCACTTCTGAAGGGTTCTGATGAAAACTGACTGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563301.5
3UTR-3UTR CAA 90 bp TACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAATGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 3 (lower is better)
Translates to: YSLHSASCREDRQLLPKEWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...TTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp ATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 3 (lower is better)
Translates to: MPLRISISVRRFSTDALFWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...GAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp ATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCATGTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: ILRVWMKRDRSPPAQNSMFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...CATGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CAA 90 bp AGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: RILRVWMKRDRSPPAQNSFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...GGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CAA 90 bp CCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCATGATTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: PAGMDEARQVAPCAKLHDFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...ATCATGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CAA 90 bp GCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTAGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 3 (lower is better)
Translates to: ANCCMKTRATFSGRILRVGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...TACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CAA 90 bp GCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 3 (lower is better)
Translates to: ALANCCMKTRATFSGRILGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...CAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR TCA 72 bp GGGATTAACCTAAAGTACCAAGATGGCGGGCAGGTGTaGGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGCT +
Preference number: 3 (lower is better)
Translates to: GINLKYQDGGQV*VPRKTGGFCGA
Trigger: AGCCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATCTTGGTACTTTAGGTTAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR GCA 72 bp CATAGTGCAGGGCAGGTACAAAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAGCTGCTGAATCCCCCT +
Preference number: 3 (lower is better)
Translates to: HSAGQVQRSPEP*SRVIRQLLNPP
Trigger: AGGGGGATTCAGCAGCTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCTTTGTACCTGCCCTGCACTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp TGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGTCACTGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 3 (lower is better)
Translates to: CPSAPDGSHLSNHSSRVTGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...AGTGACCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp GTTCTGTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 3 (lower is better)
Translates to: VLWLQIQVRDIPFMQELQWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...CTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR-3UTR CAA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: CTMWGCRMPLRISISVRRFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR-3UTR CAA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: SLPVLGGASPRSSVECSVFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR GCA 72 bp GAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTTGGCTACACACTTTAT +
Preference number: 3 (lower is better)
Translates to: EDLNLREEVLHR*LVQTFLGYTLY
Trigger: ATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
3UTR CCA 72 bp ATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTCTACTGCACAC +
Preference number: 3 (lower is better)
Translates to: MPCSDFSWLHTL*LPLHECPSTAH
Trigger: GTGTGCAGTAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
3UTR TCA 72 bp TTAAGGGCAGAAGGGCTACAAATCACCAACACCCGCTaGTTATTTAAAAGAAACTCTCAAATACATTCTTTT +
Preference number: 3 (lower is better)
Translates to: LRAEGLQITNTR*LFKRNSQIHSF
Trigger: AAAAGAATGTATTTGAGAGTTTCTTTTAAATAATCAGCGGGTGTTGGTGATTTGTAGCCCTTCTGCCCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GTCCCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTCCCGGGCCATCTCTCTaGGCAGGTCTCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VPAVSGEQGPQGELDDPVPGPSL*AGLGQR
Trigger: CCTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGG...AACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGAGAGGTCCAGGGCATCCTaGTCCCCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NSSTRPALWLVWGPEGTERSRAS*SPPAAS
Trigger: GGAGGCCGCCGGCGGGGAGCAGGATGCCCTGGACCT...CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGGGGGAGGGTGGTCCCTaGGGGGTGTTGGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PCPRLKLQHKARAVASVGGEGGP*GVLECP
Trigger: GGGGCACTCCAACACCCCTCAGGGACCACCCTCCCC...CCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGG
69% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTTCCCCACTGGGCATGTaGTCCAGGTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PAVSGEQGPQGELDDPVASPLGM*SRSTQG
Trigger: CCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGA...AGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGGCACAGCTGCCTGCTaGCAGGGCGAGGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LHGGRAGLEVGGLEGTGSGTAAC*QGEGKH
Trigger: GTGCTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCC...TGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGGCAGGGCGAGGGCAAGCACAGAAGTACCCTGCGGGGGCCCCTTGCCCTCTTCGGCACAGCTGCCTGCTaGCAGGGCGAGGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: WQGEGKHRSTLRGPLALFGTAAC*QGEGKH
Trigger: GTGCTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCC...GAAGAGGGCAAGGGGCCCCCGCAGGGTACTTCTGTGCTTGCCCTCGCCCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: RAPRRQGRPRSGWPRGHWEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...CCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGCGGGCGTCATACTaGCGCTGGCACACCATCTCG +
Preference number: 4 (lower is better)
Translates to: PAVSGEQGPQGELDDPVATRASY*RWHTIS
Trigger: CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGT...AGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGAGGTCCAGGGCATCCTaGTCCCCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLQWATSFLASAWVSAPLRSRAS*SPPAAS
Trigger: GGAGGCCGCCGGCGGGGAGCAGGATGCCCTGGACCT...CAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGAGGTCCAGGGCATCCTaGTCCCCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARQGCSGPLHSWRQPGLVRSRAS*SPPAAS
Trigger: GGAGGCCGCCGGCGGGGAGCAGGATGCCCTGGACCT...CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATCGGCGGCCTCCTCCTTaGCCATGGCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PEVHAGVILPLAHHLGGHRRPPP*PWQLKP
Trigger: TGGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCG...ATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTTCCCCCAGGCTGTGCTaGTACAGGTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: PAVSGEQGPQGELDDPVASPRLC*YRSRAS
Trigger: GGATGCCCTGGACCTGTACCAGCACAGCCTGGGGGA...AGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGGGCTCCGCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTTCCCCACTGGGCATGTaGTCCAGGTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GAPLPATAVAPPGCAGTGSPLGM*SRSTQG
Trigger: CCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGA...ACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGCGGAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGAGGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: NSSTRPALWLVWGPEGTEASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: RAPRRQGRPRSGWPRGHWSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...CCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: PMDQRSTRASYCRWHTISEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GCTAGGAGGCGTGGCTTGTCCCGGGCCATCTCTCTGAGCAGGTCTCGGGCAGAGGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: ARRRGLSRAISLSRSRAEEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...CTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ACTTCCAGGGCAGCTAGGAGGCGTGGCTTGTCCCGGGCCATCTCTCTGAGCAGGCGCTCCAGGAGCCGCTaGAGTAGGTCCCGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TSRAARRRGLSRAISLSRRSRSR*SRSRQS
Trigger: AGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCG...CCTGCTCAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGCTGCCCTGGAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCAGGGGCACAGCTGCCTaGTGGCAGGGCGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: RGRKGSSMTRLLRIFSSSRGTAA*WQGEGK
Trigger: CTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCCCCT...GCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CCA 90 bp CGGCTGGGGTCCCGCTCCAGGAGCCGCTGCAGTAGGTCCCGGCAGTCTCGGGAGAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: RLGSRSRSRCSRSRQSRERILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...CTCCCGAGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCGGGACCCCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGAGTCCCCCAGGCTGTGCTaGTACAGGTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: NSSTRPALWLVWGPEGTESPRLC*YRSRAS
Trigger: GGATGCCCTGGACCTGTACCAGCACAGCCTGGGGGA...CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR CAA 72 bp GCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ACSPGLQWATSF*ASAWVSAPLLQ
Trigger: CTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGGGCTTCATACAGGATaGCCCCCATGGACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LHGGRAGLEVGGLEGTGSGLHTG*PPWTRG
Trigger: ACCTCTGGTCCATGGGGGTCATCCTGTATGAAGCCC...TGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTGCAAGGGGAGCTCGATaGCCCGGTTGCTACGGATCT +
Preference number: 4 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCARGAR*PGCYGS
Trigger: AGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGC...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCCCCGGGCCATCTCTCTaGGCAGGTCTCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSPGPSL*AGLGQR
Trigger: CCTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGG...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCCCCGGGCCATCTCTCTaGGCAGGTCTCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VHPRSLLARAAVGHFILGPGPSL*AGLGQR
Trigger: CCTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGG...GCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACCCCGGGCCATCTCTCTaGGCAGGTCTCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRILRVWMKRDRSPPAQNPGPSL*AGLGQR
Trigger: CCTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGG...GTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGACACCGTGGCGTACGTaGCGCTGCCCAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: LSIQEACSPGLQWATSFLTPWRT*RCPGAR
Trigger: CCGAGCGCCTGGGCAGCGGCACGTACGCCACGGTGT...CAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGCTGAGTACACCGTGGCGTACGTaGCGCTGCCCAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: MAGRCEFPERLVGSVGLSTPWRT*RCPGAR
Trigger: CCGAGCGCCTGGGCAGCGGCACGTACGCCACGGTGT...ACTCAGCCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGCGCTCCAGGAGCCGCTaGAGTAGGTCCCGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SPCPRLKLQHKARAVASVRSRSR*SRSRQS
Trigger: AGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCG...CACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCAGGTCCAGGGCATCCTaGTCCCCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFLASAWVSAPLLQMAHIRSRAS*SPPAAS
Trigger: GGAGGCCGCCGGCGGGGAGCAGGATGCCCTGGACCT...GATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 4 (lower is better)
Translates to: PCPRLKLQHKARAVASVGPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...CCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GCTCCGCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTCCAAGGCCTTGTACACCGTaGCGTACGTGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: APLPATAVAPPGCAGTGPRPCTP*RTCRCP
Trigger: TGGGCAGCGGCACGTACGCCACGGTGTACAAGGCCT...TGGACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTCGGCGGCCTCCTCCTTaGCCATGGCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPRRPPP*PWQLKP
Trigger: TGGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCG...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PEVHAGVILPLAHHLGGHGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...ATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGGCAGGGCGAGGGCAAGCACAGAAGTACCCTGCGGGGGCCCCTTGCCCTCTTCGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: WQGEGKHRSTLRGPLALFGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...GAAGAGGGCAAGGGGCCCCCGCAGGGTACTTCTGTGCTTGCCCTCGCCCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTGCTGAGTGCATACTGTaGGGAGGGTGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCAECIL*GGWSLR
Trigger: CCTCAGGGACCACCCTCCCCACAGTATGCACTCAGC...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGGCTGAGTGCATACTGTaGGGAGGGTGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PCPRLKLQHKARAVASVGAECIL*GGWSLR
Trigger: CCTCAGGGACCACCCTCCCCACAGTATGCACTCAGC...CCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCGCGCTGTGGCTAGTGTaGGGCCCAGAGGGAACGGAG +
Preference number: 4 (lower is better)
Translates to: SPGLQWATSFLASAWVSAALWLV*GPEGTE
Trigger: CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGC...GGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTTCTTCACAGCCTGCACCACCAGGGCGGTTGCTCGCCCCAGGACACAGCCTCAGCCTaGTCTTCTCCAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PLLVFLHSLHHQGGCSPQDTASA*SSPTLG
Trigger: GCCGAGGGTTGGAGAAGACCAGGCTGAGGCTGTGTC...CTGGGGCGAGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGACCAGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CCTGGTCTTTCTTCACAGCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTAGGAGACGATGGCCTTaGGCTCCTCAGCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: PGLSSQPAPPGRLLAPDSRRRWP*APQPGT
Trigger: TGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCT...AGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGAGTGCCTCAGCAGGGCCTaGTTGGAAGAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: NSSTRPALWLVWGPEGTECLSRA*LEEETM
Trigger: CATCGTCTCCTCTTCCAATCAGGCCCTGCTGAGGCA...CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SPCPRLKLQHKARAVASVGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...CACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: RGRKGSSMTRLLRIFSSSGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...GCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCGGGGAGGGTGGTCCCTaGGGGGTGTTGGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SFLASAWVSAPLLQMAHIGEGGP*GVLECP
Trigger: GGGGCACTCCAACACCCCTCAGGGACCACCCTCCCC...GATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ACTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTACACCGTGGCGTACGTaGCGCTGCCCAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: TVHPRSLLARAAVGHFILTPWRT*RCPGAR
Trigger: CCGAGCGCCTGGGCAGCGGCACGTACGCCACGGTGT...AAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: PEVHAGVILPLAHHLGGHALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...ATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: QRSTRASYCRWHTISGAMALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...CATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCAGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGLHGGRAGLEVGGLEGTRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...AGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTCCCCACTGGGCATGTGCCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ACTTRAVARPRLSPLGMCRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...GCACATGCCCAGTGGGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGCCCGGGACACGTACTaGCCCACCTTTGCCTTAATT +
Preference number: 4 (lower is better)
Translates to: PEVHAGVILPLAHHLGGHARDTY*PTFALI
Trigger: AATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGC...ATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCAGGTCCAGGGCATCCTaGTCCCCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFRSRAS*SPPAAS
Trigger: GGAGGCCGCCGGCGGGGAGCAGGATGCCCTGGACCT...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ACCAAGATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGAGGGGCACAGCTGCCTaGTGGCAGGGCGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TKMAGRCEFPERLVGSVGRGTAA*WQGEGK
Trigger: CTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCCCCT...CCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGAGTGGCCTAGAGGGCACTaGGTCAGACTGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NSSTRPALWLVWGPEGTEWPRGH*VRLSPS
Trigger: GCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCA...CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GTCCCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: VPAVSGEQGPQGELDDPVGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...AACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCGAGATTCCCTCCCCGGGCCATCTCTCTaGGCAGGTCTCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DSDSPSLSRVSASQRDSLPGPSL*AGLGQR
Trigger: CCTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGG...GAGGGAATCTCGCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCACCAAGGAACCCTCCTaGGTGCTCCCTAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQWATSFLASAWVSAPLLTKEPS*VLPRPG
Trigger: CCCTGGCCTAGGGAGCACTCAGGAGGGTTCCTTGGT...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGCGGAGGTGGGAGAGATaGGGACCAAGGAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSLLARAAVGHFILGVSLRRWER*GPRNPP
Trigger: AGGAGGGTTCCTTGGTCCTCATCTCTCCCACCTCCG...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGAGGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: NSSTRPALWLVWGPEGTEALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGGGCTCCGCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: GAPLPATAVAPPGCAGTGRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...ACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGCGGAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GACCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATTCTTTCTTCACAGCCTaGACCACCAGGGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: DPHGPEVHAGVILPLAHHSFFTA*TTRAVA
Trigger: AGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGA...ATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGCTCCCCCAGGCTGTaGTGGTACAGGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSSSPRL*WYRSRA
Trigger: TGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCT...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATTGGAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCAGCTCCCCCAGGCTGTaGTGGTACAGGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IGRGDDGLELLSPGHVLPSSPRL*WYRSRA
Trigger: TGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCT...GGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTCCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGCTGAGTCCTGCGGGGGCCCCTTaGCCTCTTCTCGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: MAGRCEFPERLVGSVGLSPAGAP*PLLGAK
Trigger: TTTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGG...ACTCAGCCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAACCTGCGGGGGCCCCTTaGCCTCTTCTCGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQPAGAP*PLLGAK
Trigger: TTTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGG...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCACGAGTGTCCTTCTTaGCGTAGGCCTTGTACACCG +
Preference number: 4 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCHECPS*RRPCTP
Trigger: CGGTGTACAAGGCCTACGCCAAGAAGGACACTCGTG...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440863.7
ENST00000569437.5
CDS-3UTR CCA 90 bp GGAAAAGAGGTCTCACCATACAGGATGACCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GKEVSPYRMTPMDQRSTRASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...CCGCGTGGACCTCTGGTCCATGGGGGTCATCCTGTATGGTGAGACCTCTTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR CCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGCCAGACTCTCCCCACTaGGCATGTGCTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RSLLARAAVGHFILGVSLPDSPH*ACAPGP
Trigger: TGGACCTGGAGCACATGCCCAGTGGGGAGAGTCTGG...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCCTCCTGGTCTTTCTTCACAGCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACCTCCTCCTTGGCCATaGCAGCTGAAGCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: PSWSFFTACTTRAVARPRPPPWP*QLKPLP
Trigger: TGGAAGTGGCTTCAGCTGCCATGGCCAAGGAGGAGG...TCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGACCAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCTCCCCCAGGCTGTGCTaGTACAGGTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: VHPRSLLARAAVGHFILGSPRLC*YRSRAS
Trigger: GGATGCCCTGGACCTGTACCAGCACAGCCTGGGGGA...GCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGCCCTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGGCACAGCTGCCTGCTaGCAGGGCGAGGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LPSPPVYSTAIKPSVGCRGTAAC*QGEGKH
Trigger: GTGCTTGCCCTCGCCCTGCCAGCAGGCAGCTGTGCC...TCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTGCTGAGTGCATACTGTaGGGAGGGTGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGLQWATSFLASAWVSAPAECIL*GGWSLR
Trigger: CCTCAGGGACCACCCTCCCCACAGTATGCACTCAGC...AGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGCTGTGGCTAGTGTaGGGCCCAGAGGGAACGGAG +
Preference number: 4 (lower is better)
Translates to: LSIQEACSPGLQWATSFLALWLV*GPEGTE
Trigger: CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGC...CAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: RAPRRQGRPRSGWPRGHWLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...CCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAATCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RQNPAGMDEARQVAPCAKSCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...TTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp CAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: QRSTRASYCRWHTISGAMGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...CATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCGGGCTTCATACAGGATaGCCCCCATGGACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SPGLQWATSFLASAWVSAGLHTG*PPWTRG
Trigger: ACCTCTGGTCCATGGGGGTCATCCTGTATGAAGCCC...GGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGGGGCTTCATACAGGATaGCCCCCATGGACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLQWATSFLASAWVSAPLGLHTG*PPWTRG
Trigger: ACCTCTGGTCCATGGGGGTCATCCTGTATGAAGCCC...CAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CCTGGTCTTTCTTCACAGCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTGGGCTTCATACAGGATaGCCCCCATGGACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PGLSSQPAPPGRLLAPDSGLHTG*PPWTRG
Trigger: ACCTCTGGTCCATGGGGGTCATCCTGTATGAAGCCC...AGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCTGGGTTCTGTGGGGCTaGGTGCATACTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VHPRSLLARAAVGHFILGWVLWG*VHTVGR
Trigger: CCTCCCCACAGTATGCACTCAGCCCCACAGAACCCA...GCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTTGGGTTCTGTGGGGCTaGGTGCATACTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSKKPARQGCSGPLHSWRWVLWG*VHTVGR
Trigger: CCTCCCCACAGTATGCACTCAGCCCCACAGAACCCA...ACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GCTAGGAGGCGTGGCTTGTCCCGGGCCATCTCTCTGAGCAGGTCTCGGGCAGAGGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ARRRGLSRAISLSRSRAEASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...CTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGACACCGTGGCGTACGTaGCGCTGCCCAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: CTMWGCRMPLRISISVRRTPWRT*RCPGAR
Trigger: CCGAGCGCCTGGGCAGCGGCACGTACGCCACGGTGT...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp GCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTCCCCACTGGGCATGTGCGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: ACTTRAVARPRLSPLGMCEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...GCACATGCCCAGTGGGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ACTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTCGCTCCAGGAGCCGCTaGAGTAGGTCCCGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TVHPRSLLARAAVGHFILRSRSR*SRSRQS
Trigger: AGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCG...AAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCAGGGCTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGLHGGRAGLEVGGLEGTRSPEP*SRVIRQ
Trigger: CTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCT...AGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCACCTTTGCCTTAATTaGCTCCTTCCGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCHLCLN*LLPLGI
Trigger: GATGCCCAGCGGAAGGAGGCAATTAAGGCAAAGGTG...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 4 (lower is better)
Translates to: PSKKPARQGCSGPLHSWRPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...ACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCCCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 4 (lower is better)
Translates to: VHPRSLLARAAVGHFILGPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...GCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAAAAAGGGGAAAGAGCTTaGCCAGGGCTCCACGGCGGC +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQKGERA*PGLHGG
Trigger: GCCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTT...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GCTAGGAGGCGTGGCTTGTCCCGGGCCATCTCTCTGAGCAGGTCTCGGGCAGAGTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ARRRGLSRAISLSRSRAESASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...CTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCAGGAGATGCGACGGCTaGGGTCCCGCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFRRCDG*GPAPGA
Trigger: GGCTCCTGGAGCGGGACCCCAGCCGTCGCATCTCCT...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGAGGAGATGCGACGGCTaGGGTCCCGCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GARASHPTGTCVVRNQSLRRCDG*GPAPGA
Trigger: GGCTCCTGGAGCGGGACCCCAGCCGTCGCATCTCCT...CAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCTCCCCCAGGCTGTGCTaGTACAGGTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: QNPAGMDEARQVAPCAKLSPRLC*YRSRAS
Trigger: GGATGCCCTGGACCTGTACCAGCACAGCCTGGGGGA...GAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRGRKGSSMTRLLRIFSSFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: RSLLARAAVGHFILGVSLGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAAAAGAGGAGCTGAGTTaGAATAAGGGGTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LHGGRAGLEVGGLEGTGSKEELS*NKGSRE
Trigger: TTCCCGGGACCCCTTATTCCAACTCAGCTCCTCTTT...TGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGAGACCCAGCGCTGTGGCTAGTGTaGGGCCCAGAGGGAACGGAG +
Preference number: 4 (lower is better)
Translates to: PMLWAVKVSAPLKRWGDPALWLV*GPEGTE
Trigger: CTCCGTTCCCTCTGGGCCCCACACTAGCCACAGCGC...TGGGTCTCCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: FLASAWVSAPLLQMAHICSCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000568210.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GACCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: DPHGPEVHAGVILPLAHHGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...ATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GTACCAAGATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGAGGAGACGATGGCCTTaGGCTCCTCAGCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: VPRWRAGVSSQKDWWVLWRRRWP*APQPGT
Trigger: TGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCT...CCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATCTTGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACGGAGGTGGGAGAGATaGGGACCAAGGAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQNPAGMDEARQVAPCAKRRWER*GPRNPP
Trigger: AGGAGGGTTCCTTGGTCCTCATCTCTCCCACCTCCG...TTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR TCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGGGTCAAGCCTGGCCTaGCGCCCCTCAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLPVLGGASPRSSVECSVGSSLA*RPSAGA
Trigger: GGCCCCTGCTGAGGGGCGTCAGGCCAGGCTTGACCC...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR GCA 90 bp GCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTCCCCACTGGGCATGTGCGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ACTTRAVARPRLSPLGMCEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...GCACATGCCCAGTGGGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGGCAGGGCGAGGGCAAGCACAGAAGTACCCTGCGGGGGCCCCTTGCCCTCTTCGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: WQGEGKHRSTLRGPLALFEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...GAAGAGGGCAAGGGGCCCCCGCAGGGTACTTCTGTGCTTGCCCTCGCCCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAACGCTCCAGGAGCCGCTaGAGTAGGTCCCGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LHEDTRHLLRQNPAGMDERSRSR*SRSRQS
Trigger: AGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCG...TTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTCCCCACTGGGCATGTaGTCCAGGTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFSPLGM*SRSTQG
Trigger: CCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGA...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCAGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCCCCACTGGGCATGTaGTCCAGGTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CRNCRALANCCMKTRATFSPLGM*SRSTQG
Trigger: CCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGA...GAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGCCCGGGACACGTACTaGCCCACCTTTGCCTTAATT +
Preference number: 4 (lower is better)
Translates to: RSLLARAAVGHFILGVSLARDTY*PTFALI
Trigger: AATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGC...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGGCCCGGGACACGTACTaGCCCACCTTTGCCTTAATT +
Preference number: 4 (lower is better)
Translates to: GLQWATSFLASAWVSAPLARDTY*PTFALI
Trigger: AATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGC...CAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAGCCCGGGACACGTACTaGCCCACCTTTGCCTTAATT +
Preference number: 4 (lower is better)
Translates to: LRQNPAGMDEARQVAPCAARDTY*PTFALI
Trigger: AATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGC...TGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTGCCCTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAAGCTCCCCCAGGCTGTaGTGGTACAGGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPSPPVYSTAIKPSVGCRSSPRL*WYRSRA
Trigger: TGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCT...TCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTAGCTCCCCCAGGCTGTaGTGGTACAGGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HSWRQPGLVPLCSRWLTSSSPRL*WYRSRA
Trigger: TGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCT...AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAACCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 4 (lower is better)
Translates to: RSLLARAAVGHFILGVSLVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCCCTGCGGGGGCCCCTTaGCCTCTTCTCGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFPAGAP*PLLGAK
Trigger: TTTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGG...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGTTACACTCAGCCTCCTaGAGGGAGGACAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: RSLLARAAVGHFILGVSLLHSAS*REDRQL
Trigger: GAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAA...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGCGTTCATGCAGGAATTaGAGGGCGCTAATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PMDQRSTRASYCRWHTISRSCRN*RALIAA
Trigger: TGCAGCAATTAGCGCCCTGCAATTCCTGCATGAACG...CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR CCA 90 bp CCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGAGACCCAAGGCCTTGTACACCGTaGCGTACGTGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PMLWAVKVSAPLKRWGDPRPCTP*RTCRCP
Trigger: TGGGCAGCGGCACGTACGCCACGGTGTACAAGGCCT...TGGGTCTCCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SYEQIPTVPLCPGCQLPSASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...GCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LYTQPPAGRTDSSCPRKHASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...ATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAAGGAGATGCGACGGCTaGGGTCCCGCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RNCRALANCCMKTRATFSRRCDG*GPAPGA
Trigger: GGCTCCTGGAGCGGGACCCCAGCCGTCGCATCTCCT...TGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAAGGAGATGCGACGGCTaGGGTCCCGCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: YSLHSASCREDRQLLPKERRCDG*GPAPGA
Trigger: GGCTCCTGGAGCGGGACCCCAGCCGTCGCATCTCCT...TTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGGCTGAATCCCCCTCCTaGTCTTTCTTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ARQGCSGPLHSWRQPGLVAESPS*SFFTAC
Trigger: GCAGGCTGTGAAGAAAGACCAGGAGGGGGATTCAGC...CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCGCTGAATCCCCCTCCTaGTCTTTCTTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRGRKGSSMTRLLRIFSSAESPS*SFFTAC
Trigger: GCAGGCTGTGAAGAAAGACCAGGAGGGGGATTCAGC...GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGTCAGCAGGGCCTGATTaGAAGAGGAGACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: SPCPRLKLQHKARAVASVSAGPD*KRRRWP
Trigger: AGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA...CACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCTCAGCAGGGCCTGATTaGAAGAGGAGACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: SRGRKGSSMTRLLRIFSSSAGPD*KRRRWP
Trigger: AGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA...GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAACCTCCTCCTTGGCCATaGCAGCTGAAGCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RAGLEVGGLEGTGSDCLQPPPWP*QLKPLP
Trigger: TGGAAGTGGCTTCAGCTGCCATGGCCAAGGAGGAGG...TTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCCGGCGGCCTCCTCCTTaGCCATGGCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFRRPPP*PWQLKP
Trigger: TGGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCG...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PSKKPARQGCSGPLHSWRFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...ACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: VHPRSLLARAAVGHFILGGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...GCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GCTCCGCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTCCACCTAAAGTACCAAGATaGCGGGCAGGTGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: APLPATAVAPPGCAGTGPPKVPR*RAGVSS
Trigger: GGAACTCACACCTGCCCGCCATCTTGGTACTTTAGG...TGGACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCGCCCCATTGAAGAGATaGGGAGACCCAGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LQWATSFLASAWVSAPLLAPLKR*GDPGPE
Trigger: TTCTGGGCCTGGGTCTCCCCATCTCTTCAATGGGGC...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 4 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: STCFSSHGDMCCAKPKSASCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...GGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: NCCMKTRATFSGRILRVWSCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...CCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp TCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCGCAAGGGGAGCTCGATaGCCCGGTTGCTACGGATCT +
Preference number: 4 (lower is better)
Translates to: SFLASAWVSAPLLQMAHIARGAR*PGCYGS
Trigger: AGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGC...GATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGAGGAGACGATGGCCTTaGGCTCCTCAGCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: NCCMKTRATFSGRILRVWRRRWP*APQPGT
Trigger: TGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCT...CCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCAGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCAGGAGACGATGGCCTTaGGCTCCTCAGCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: CRNCRALANCCMKTRATFRRRWP*APQPGT
Trigger: TGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCT...GAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGTGCCTCAGCAGGGCCTaGTTGGAAGAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: LSIQEACSPGLQWATSFLCLSRA*LEEETM
Trigger: CATCGTCTCCTCTTCCAATCAGGCCCTGCTGAGGCA...CAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGACCTGGAGGCAAAGGGGTGCCTCAGCAGGGCCTaGTTGGAAGAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: RLLRIFSSSSENDLEAKGCLSRA*LEEETM
Trigger: CATCGTCTCCTCTTCCAATCAGGCCCTGCTGAGGCA...CCCCTTTGCCTCCAGGTCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GAGCCACGGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCATGCCTCAGCAGGGCCTaGTTGGAAGAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: EPRSTCFSSHGDMCCAKPCLSRA*LEEETM
Trigger: CATCGTCTCCTCTTCCAATCAGGCCCTGCTGAGGCA...TGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGATTCAGCTCGGGCCATaGGGTTCTGAACCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RSLLARAAVGHFILGVSLIQLGP*GSEPQC
Trigger: ACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAAT...CAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCATTCAGCTCGGGCCATaGGGTTCTGAACCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SRGRKGSSMTRLLRIFSSIQLGP*GSEPQC
Trigger: ACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAAT...GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CCAAAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCGGGGAGGGTGGTCCCTaGGGGGTGTTGGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PKSASFRWGFSKELSRMFGEGGP*GVLECP
Trigger: GGGGCACTCCAACACCCCTCAGGGACCACCCTCCCC...GAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR TCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGGATGGCGGGCAGGTGTaGGTTCCCAGAAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWDGGQV*VPRKTG
Trigger: ACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATC...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCGAGATGGCGGGCAGGTGTaGGTTCCCAGAAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: DRGLHAPKRTGTGPSNHRDGGQV*VPRKTG
Trigger: ACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATC...TCGGTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTAGGACACCGTGGCGTACGTaGCGCTGCCCAGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: FSSHGDMCCAKPKSASFRTPWRT*RCPGAR
Trigger: CCGAGCGCCTGGGCAGCGGCACGTACGCCACGGTGT...CCTAAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: LLRQNPAGMDEARQVAPCRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...GCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: LQWATSFLASAWVSAPLLRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000568210.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: LLRQNPAGMDEARQVAPCALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...GCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp CACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: HLLRQNPAGMDEARQVAPALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...GGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp CCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: PSKKPARQGCSGPLHSWRRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...ACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTTCCCCACTGGGCATGTaGTCCAGGTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: IQHSHQTICGVQSNLREASPLGM*SRSTQG
Trigger: CCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGA...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCTCTTTCTTCACAGCCTaGACCACCAGGGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSSFFTA*TTRAVA
Trigger: AGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGA...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGATAGGTCCAGGGCATCCTaGTCCCCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLGGASPRSSVECSVASDRSRAS*SPPAAS
Trigger: GGAGGCCGCCGGCGGGGAGCAGGATGCCCTGGACCT...ATCTGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTAGGGTCACTGAAGGGTaGAAGAGCTACGAACAGATT +
Preference number: 4 (lower is better)
Translates to: GGRAGLEVGGLEGTGSDCRVTEG*KSYEQI
Trigger: AATCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCT...ACAGTCTGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGAGGGTCACTGAAGGGTaGAAGAGCTACGAACAGATT +
Preference number: 4 (lower is better)
Translates to: PCPRLKLQHKARAVASVGRVTEG*KSYEQI
Trigger: AATCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCT...CCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATTGGAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: IGRGDDGLELLSPGHVLPGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...GGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 4 (lower is better)
Translates to: PSKKPARQGCSGPLHSWRVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...ACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AATGATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACAAAGGGGAAAGAGCTTaGCCAGGGCTCCACGGCGGC +
Preference number: 4 (lower is better)
Translates to: NDRGLHAPKRTGTGPSNHKGERA*PGLHGG
Trigger: GCCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTT...GTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GAGCCACGGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCACAGGGCGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: EPRSTCFSSHGDMCCAKPQGANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCGCCCTG...TGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR GCA 90 bp CTCACCATACAGGATGACCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGTTGCAGGGCGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: LTIQDDPHGPEVHAGVILLQGAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCGCCCTGCAA...CAGTATGACGCCCGCGTGGACCTCTGGTCCATGGGGGTCATCCTGTATGGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR GCA 90 bp CCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGCTGATCCATTTCTTTaGATTCTTGGCGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PEVHAGVILPLAHHLGGHADPFL*ILGVGL
Trigger: AAGGCCTACGCCAAGAATGCAAAGAAATGGATCAGC...ATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CCA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCAGGCCTTGTACACCGTaGCGTACGTGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFRPCTP*RTCRCP
Trigger: TGGGCAGCGGCACGTACGCCACGGTGTACAAGGCCT...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCACGGCGGCAGGGCAGGCCTAGAAGTGGGTGGCCTAGAGGGCACTGGGTCATGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: LHGGRAGLEVGGLEGTGSWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...TGACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCTGCCCTGCCGCCGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PGLQWATSFLASAWVSAPSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...AGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATTGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: FTLSLLQGGQTALAQGSIASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...AATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QLHNVGMSNALEDLNLREASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...CTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTGCGTCATACTGCCGCTaGCACACCATCTCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TCFSSHGDMCCAKPKSASASYCR*HTISGA
Trigger: GGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGC...ACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCTCAGCAGGGCCTGATTaGAAGAGGAGACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LQWATSFLASAWVSAPLLSAGPD*KRRRWP
Trigger: AGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGCCTCCTCCTTGGCCATaGCAGCTGAAGCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: LSIQEACSPGLQWATSFLPPPWP*QLKPLP
Trigger: TGGAAGTGGCTTCAGCTGCCATGGCCAAGGAGGAGG...CAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGCAGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCCCCCAGGCTGTGCTaGTACAGGTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: CRNCRALANCCMKTRATFSPRLC*YRSRAS
Trigger: GGATGCCCTGGACCTGTACCAGCACAGCCTGGGGGA...GAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LQWATSFLASAWVSAPLLGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FLASAWVSAPLLQMAHICSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: SFLASAWVSAPLLQMAHISPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...GATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATGGCCTAGAGGGCACTaGGTCAGACTGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQWPRGH*VRLSPS
Trigger: GCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCA...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ACCAAGATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGTGGCCTAGAGGGCACTaGGTCAGACTGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TKMAGRCEFPERLVGSVGWPRGH*VRLSPS
Trigger: GCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCA...CCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGGCCCCATTGAAGAGATaGGGAGACCCAGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWAPLKR*GDPGPE
Trigger: TTCTGGGCCTGGGTCTCCCCATCTCTTCAATGGGGC...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCAGGCAGAGCGGAGGCTaGGAGGGAATGGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: EHVLLIPRGHVLCETKVCRQSGG*EGMGQA
Trigger: GGCTTGACCCATTCCCTCCCAGCCTCCGCTCTGCCT...GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR TCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: IQHSHQTICGVQSNLREASCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000568210.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RASHPTGTCVVRNQSLPVSCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...AACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTGGGCTTCATACAGGATaGCCCCCATGGACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FLASAWVSAPLLQMAHICGLHTG*PPWTRG
Trigger: ACCTCTGGTCCATGGGGGTCATCCTGTATGAAGCCC...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp ATAAGTGCCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGAGGAGACGATGGCCTTaGGCTCCTCAGCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: ISAHAVGCEGISPIEEMGRRRWP*APQPGT
Trigger: TGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCT...CCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGGCACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTAGGAGACGATGGCCTTaGGCTCCTCAGCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: IQHSHQTICGVQSNLREARRRWP*APQPGT
Trigger: TGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCT...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTCCCGGGCCATCTCTCTaGGCAGGTCTCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CFSSHGDMCCAKPKSASFPGPSL*AGLGQR
Trigger: CCTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGG...AAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: ARATNRFRQSLFVQGVSFGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...GAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATTGGGTTCTGTGGGGCTaGGTGCATACTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LYTQPPAGRTDSSCPRKHWVLWG*VHTVGR
Trigger: CCTCCCCACAGTATGCACTCAGCCCCACAGAACCCA...ATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AATGATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCGGAGGTGGGAGAGATaGGGACCAAGGAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: NDRGLHAPKRTGTGPSNHRRWER*GPRNPP
Trigger: AGGAGGGTTCCTTGGTCCTCATCTCTCCCACCTCCG...GTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCGAAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: DRGLHAPKRTGTGPSNHRRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...TCGGTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: TRHLLRQNPAGMDEARQVRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...GACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp GGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGAAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: GELDDPVATDLLFQLRERRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...TCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATTGGAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: IGRGDDGLELLSPGHVLPRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...GGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: YSLHSASCREDRQLLPKEEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...TTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: IQHSHQTICGVQSNLREAEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: SNALEDLNLREEVLHRCLEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...AAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTACGCGGGCGTCATACTaGCGCTGGCACACCATCTCG +
Preference number: 4 (lower is better)
Translates to: IQHSHQTICGVQSNLREATRASY*RWHTIS
Trigger: CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGT...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCACGCGGGCGTCATACTaGCGCTGGCACACCATCTCG +
Preference number: 4 (lower is better)
Translates to: MSNALEDLNLREEVLHRCTRASY*RWHTIS
Trigger: CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGT...GCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATTACGCGGGCGTCATACTaGCGCTGGCACACCATCTCG +
Preference number: 4 (lower is better)
Translates to: FTLSLLQGGQTALAQGSITRASY*RWHTIS
Trigger: CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGT...AATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGTCCCCACTGGGCATGTaGTCCAGGTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VSAPLLQMAHICPIILLGSPLGM*SRSTQG
Trigger: CCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGA...CCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCTCTTTCTTCACAGCCTaGACCACCAGGGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVSFFTA*TTRAVA
Trigger: AGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGA...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GCTCCGCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTCCAAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: APLPATAVAPPGCAGTGPRSPEP*SRVIRQ
Trigger: CTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCT...TGGACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGCGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCACCTTTGCCTTAATTaGCTCCTTCCGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RATFSGRILRVWMKRDRSHLCLN*LLPLGI
Trigger: GATGCCCAGCGGAAGGAGGCAATTAAGGCAAAGGTG...CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCGTACTGCCCCACCTTTaGCTTAATTGCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: LQWATSFLASAWVSAPLLVLPHL*LNCLLP
Trigger: CGGAAGGAGGCAATTAAGGCAAAGGTGGGGCAGTAC...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCAGCTCCCCCAGGCTGTaGTGGTACAGGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARATNRFRQSLFVQGVSFSSPRL*WYRSRA
Trigger: TGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCT...GAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ACCAAGATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: TKMAGRCEFPERLVGSVGGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...CCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATCTTGGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGCCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 4 (lower is better)
Translates to: ALEDLNLREEVLHRCLVQPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...CTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCCCTGCTCGCCAGGGCTaGAGTGGGCCACTTCATTCT +
Preference number: 4 (lower is better)
Translates to: SYEQIPTVPLCPGCQLPSPARQG*SGPLHS
Trigger: AGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGG...GCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAAGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGAGATTTGGGGACTCTaGTGCACACCAGCACCGGGC +
Preference number: 4 (lower is better)
Translates to: WGCRMPLRISISVRRFSTEIWGL*CTPAPG
Trigger: GCCCGGTGCTGGTGTGCAGCAGAGTCCCCAAATCTC...GGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562161.5
CDS-3UTR GCA 90 bp TGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGCGAGTGTCCTTCTACTaGACACCAGCACCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: CCMKTRATFSGRILRVWMRVSFY*TPAPGF
Trigger: GAAGCCCGGTGCTGGTGTGCAGTAGAAGGACACTCG...CATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAACACGAGTGTCCTTCTTaGCGTAGGCCTTGTACACCG +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQHECPS*RRPCTP
Trigger: CGGTGTACAAGGCCTACGCCAAGAAGGACACTCGTG...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000569437.5
CDS-3UTR CCA 90 bp GCTAGGAGGCGTGGCTTGTCCCGGGCCATCTCTCTGAGCAGGTCTCGGGCAGAGTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: ARRRGLSRAISLSRSRAEWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...CTCTGCCCGAGACCTGCTCAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ARQGCSGPLHSWRQPGLVFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATTGGAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: IGRGDDGLELLSPGHVLPRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...GGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCCAGACTCTCCCCACTaGGCATGTGCTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: EHVLLIPRGHVLCETKVCPDSPH*ACAPGP
Trigger: TGGACCTGGAGCACATGCCCAGTGGGGAGAGTCTGG...GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GGGTGCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCCAGACTCTCCCCACTaGGCATGTGCTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GCKSYEQIPTVPLCPGCQPDSPH*ACAPGP
Trigger: TGGACCTGGAGCACATGCCCAGTGGGGAGAGTCTGG...CTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTACCAGACTCTCCCCACTaGGCATGTGCTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ANCCMKTRATFSGRILRVPDSPH*ACAPGP
Trigger: TGGACCTGGAGCACATGCCCAGTGGGGAGAGTCTGG...TACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAAGCTGAATCCCCCTCCTaGTCTTTCTTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQAESPS*SFFTAC
Trigger: GCAGGCTGTGAAGAAAGACCAGGAGGGGGATTCAGC...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGTCAGCAGGGCCTGATTaGAAGAGGAGACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWSAGPD*KRRRWP
Trigger: AGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAAGGGTGCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTTCCCCCAGGCTGTGCTaGTACAGGTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: EGCKSYEQIPTVPLCPGCSPRLC*YRSRAS
Trigger: GGATGCCCTGGACCTGTACCAGCACAGCCTGGGGGA...ACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGCACCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGCTGAGTGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: MAGRCEFPERLVGSVGLSGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...ACTCAGCCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GARASHPTGTCVVRNQSLSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...CAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGAAAGAGGAGCTGAGTTaGAATAAGGGGTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: SPCPRLKLQHKARAVASVKEELS*NKGSRE
Trigger: TTCCCGGGACCCCTTATTCCAACTCAGCTCCTCTTT...CACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCCTAAAGTACCAAGATaGCGGGCAGGTGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LQWATSFLASAWVSAPLLPKVPR*RAGVSS
Trigger: GGAACTCACACCTGCCCGCCATCTTGGTACTTTAGG...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCCCTAAAGTACCAAGATaGCGGGCAGGTGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSPKVPR*RAGVSS
Trigger: GGAACTCACACCTGCCCGCCATCTTGGTACTTTAGG...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCAGGCCTAGAAGTGGGTaGCCTAGAGGGCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: EHVLLIPRGHVLCETKVCRPRSG*PRGHWV
Trigger: GACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCT...GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CCA 90 bp GCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGACACAGCCTCAGCCTaGTCTTCTCCAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: ARASHPTGTCVVRNQSLPDTASA*SSPTLG
Trigger: GCCGAGGGTTGGAGAAGACCAGGCTGAGGCTGTGTC...TGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565373.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGGACACAGCCTCAGCCTaGTCTTCTCCAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: ALEDLNLREEVLHRCLVQDTASA*SSPTLG
Trigger: GCCGAGGGTTGGAGAAGACCAGGCTGAGGCTGTGTC...CTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp AGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCGACACAGCCTCAGCCTaGTCTTCTCCAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RALANCCMKTRATFSGRIDTASA*SSPTLG
Trigger: GCCGAGGGTTGGAGAAGACCAGGCTGAGGCTGTGTC...GATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp GTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACGACACAGCCTCAGCCTaGTCTTCTCCAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VGMSNALEDLNLREEVLHDTASA*SSPTLG
Trigger: GCCGAGGGTTGGAGAAGACCAGGCTGAGGCTGTGTC...GTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: CSGPLHSWRQPGLVPLCSGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...GGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACGCAAGGGGAGCTCGATaGCCCGGTTGCTACGGATCT +
Preference number: 4 (lower is better)
Translates to: LPSSIQHSHQTICGVQSNARGAR*PGCYGS
Trigger: AGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGC...GTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp ACCAAGATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGATTCAGCTCGGGCCATaGGGTTCTGAACCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: TKMAGRCEFPERLVGSVGIQLGP*GSEPQC
Trigger: ACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAAT...CCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCATTCAGCTCGGGCCATaGGGTTCTGAACCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: QNPAGMDEARQVAPCAKLIQLGP*GSEPQC
Trigger: ACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAAT...GAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGTCAGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SAPLLQMAHICPIILLGSGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...TGACCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGACCAAGGAACCCTCCTaGGTGCTCCCTAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SIQHSHQTICGVQSNLRETKEPS*VLPRPG
Trigger: CCCTGGCCTAGGGAGCACTCAGGAGGGTTCCTTGGT...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCGAGCCACGGAGCACGTaGTTCTCATCCCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: LNLREEVLHRCLVQTFLGEPRST*FSSHGD
Trigger: GTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC...GCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACAACGCGGGCGTCATACTaGCGCTGGCACACCATCTCG +
Preference number: 4 (lower is better)
Translates to: LREEVLHRCLVQTFLGYTTRASY*RWHTIS
Trigger: CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGT...TGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGCGCTCCAGGAGCCGCTaGAGTAGGTCCCGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SLPVLGGASPRSSVECSVRSRSR*SRSRQS
Trigger: AGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCG...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTCGCTCCAGGAGCCGCTaGAGTAGGTCCCGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LRISISVRRFSTDALFRLRSRSR*SRSRQS
Trigger: AGACTGCCGGGACCTACTGCAGCGGCTCCTGGAGCG...AAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGACGTACTGCCCCACCTTTaGCTTAATTGCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GSSMTRLLRIFSSSSENDVLPHL*LNCLLP
Trigger: CGGAAGGAGGCAATTAAGGCAAAGGTGGGGCAGTAC...GTCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGAAAGGGGAAAGAGCTTaGCCAGGGCTCCACGGCGGC +
Preference number: 4 (lower is better)
Translates to: SIQHSHQTICGVQSNLREKGERA*PGLHGG
Trigger: GCCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTT...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCCGAGTGTCCTTCTACTaGACACCAGCACCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: STCFSSHGDMCCAKPKSARVSFY*TPAPGF
Trigger: GAAGCCCGGTGCTGGTGTGCAGTAGAAGGACACTCG...GGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCGAGTGTCCTTCTACTaGACACCAGCACCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GARASHPTGTCVVRNQSLRVSFY*TPAPGF
Trigger: GAAGCCCGGTGCTGGTGTGCAGTAGAAGGACACTCG...CAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000568210.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTTCTGTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGAGGAGATGCGACGGCTaGGGTCCCGCTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLWLQIQVRDIPFMQELQRRCDG*GPAPGA
Trigger: GGCTCCTGGAGCGGGACCCCAGCCGTCGCATCTCCT...CTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTGCTGAATCCCCCTCCTaGTCTTTCTTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLASAWVSAPLLQMAHICAESPS*SFFTAC
Trigger: GCAGGCTGTGAAGAAAGACCAGGAGGGGGATTCAGC...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGAGACCCAGCTGAATCCCCCTCCTaGTCTTTCTTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PMLWAVKVSAPLKRWGDPAESPS*SFFTAC
Trigger: GCAGGCTGTGAAGAAAGACCAGGAGGGGGATTCAGC...TGGGTCTCCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CACGGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCCTCCTCCTTGGCCATaGCAGCTGAAGCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: HGARASHPTGTCVVRNQSPPPWP*QLKPLP
Trigger: TGGAAGTGGCTTCAGCTGCCATGGCCAAGGAGGAGG...ACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCGGCGGCCTCCTCCTTaGCCATGGCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: EDLNLREEVLHRCLVQTFRRPPP*PWQLKP
Trigger: TGGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCG...AAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 4 (lower is better)
Translates to: SWRQPGLVPLCSRWLTSVPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...GACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: FLASAWVSAPLLQMAHICGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAAGGGTGCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: EGCKSYEQIPTVPLCPGCSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...ACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGCACCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTGGAATGGGTCAAGCCTaGCCTGACGCCCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLLIPRGHVLCETKVCQFGMGQA*PDAPQQ
Trigger: CTGCTGAGGGGCGTCAGGCCAGGCTTGACCCATTCC...AAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR CCA 90 bp CGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTCGAAGAGGGCTTCTGTaGAAGGGAGGCAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: RASHPTGTCVVRNQSLPVRRGLL*KGGRAE
Trigger: CTCCGCTCTGCCTCCCTTCCACAGAAGCCCTCTTCG...AACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR CCA 90 bp ATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCGACACAGCCTCAGCCTaGTCTTCTCCAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: MPLRISISVRRFSTDALFDTASA*SSPTLG
Trigger: GCCGAGGGTTGGAGAAGACCAGGCTGAGGCTGTGTC...GAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp CAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCTGATTCTGGAATCCTaGCTTCCCGACACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QNPAGMDEARQVAPCAKLLILES*LPDTAS
Trigger: TGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAG...GAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp AGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTGATTCTGGAATCCTaGCTTCCCGACACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RQNPAGMDEARQVAPCAKLILES*LPDTAS
Trigger: TGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAG...TTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp CGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGACCTGGAGGCAAAGGGGCTGATTCTGGAATCCTaGCTTCCCGACACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RLLRIFSSSSENDLEAKGLILES*LPDTAS
Trigger: TGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAG...CCCCTTTGCCTCCAGGTCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCCACCATTTCTTTGCATTCTTaGCGTAGGCCTTGTACACCG +
Preference number: 4 (lower is better)
Translates to: EEETMALSSSARDTYCPTISLHS*RRPCTP
Trigger: CGGTGTACAAGGCCTACGCCAAGAATGCAAAGAAAT...GGTGGGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR TCA 90 bp AAGCAGGGAAAAGAGGTCTCACCATACAGGATGACCCCCATGGACCAGAGGTCCGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 4 (lower is better)
Translates to: KQGKEVSPYRMTPMDQRSGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...GGACCTCTGGTCCATGGGGGTCATCCTGTATGGTGAGACCTCTTTTCCCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR TCA 90 bp GGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: GRILRVWMKRDRSPPAQNLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...GTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp TTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LRISISVRRFSTDALFRLSCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...AAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp CGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: REEVLHRCLVQTFLGYTLSCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...AAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp TGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTACTGCACACCAGTCCTGCGGGTATGGATaGAGCGAGACAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: WLHTLWLPLHECPSTAHQSCGYG*SETGRP
Trigger: GGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGA...CTGGTGTGCAGTAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp ATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGCTGAGTGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: MAGRCEFPERLVGSVGLSGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...ACTCAGCCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp ACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: TRHLLRQNPAGMDEARQVGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...GACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCGCAAGGGGAGCTCGATaGCCCGGTTGCTACGGATCT +
Preference number: 4 (lower is better)
Translates to: LNLREEVLHRCLVQTFLGARGAR*PGCYGS
Trigger: AGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGC...GCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp ATAAGTGCCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGTGCCTCAGCAGGGCCTaGTTGGAAGAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: ISAHAVGCEGISPIEEMGCLSRA*LEEETM
Trigger: CATCGTCTCCTCTTCCAATCAGGCCCTGCTGAGGCA...CCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGGCACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCGTAACAAAGGTCTCATaGAAGAAGTGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SPGLQWATSFLASAWVSAVTKVS*KKCCSP
Trigger: GGGAGAACAGCACTTCTTTCATGAGACCTTTGTTAC...GGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000440863.7
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACCAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: GRILRVWMKRDRSPPAQNQPSAS*SISLHS
Trigger: AGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTG...GTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp AAGCAGGGAAAAGAGGTCTCACCATACAGGATGACCCCCATGGACCAGAGGTCCGCGCTAATTGCTGCATaGAGACACGCGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: KQGKEVSPYRMTPMDQRSALIAA*RHAPPS
Trigger: AGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCGC...GGACCTCTGGTCCATGGGGGTCATCCTGTATGGTGAGACCTCTTTTCCCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR GCA 90 bp CGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: RMPLRISISVRRFSTDALRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...CAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp CTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: LYTQPPAGRTDSSCPRKHALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...ATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: VGMSNALEDLNLREEVLHALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...GTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp CACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: HVLLIPRGHVLCETKVCQRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTACGCGGGCGTCATACTaGCGCTGGCACACCATCTCG +
Preference number: 4 (lower is better)
Translates to: CFSSHGDMCCAKPKSASFTRASY*RWHTIS
Trigger: CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGT...AAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCCACCTTTGCCTTAATTaGCTCCTTCCGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: SFLASAWVSAPLLQMAHIHLCLN*LLPLGI
Trigger: GATGCCCAGCGGAAGGAGGCAATTAAGGCAAAGGTG...GATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCGCCCGGGACACGTACTaGCCCACCTTTGCCTTAATT +
Preference number: 4 (lower is better)
Translates to: CRMPLRISISVRRFSTDAARDTY*PTFALI
Trigger: AATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGC...GGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGTCCCTCATCTTGACCTaGTCCTTCAAGTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPCPRLKLQHKARAVASVSLILT*SFKYSA
Trigger: AGCTGAATACTTGAAGGAGCAGGTCAAGATGAGGGA...CACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440863.7
ENST00000647587.1
CDS-3UTR GCA 90 bp AATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: NCCMKTRATFSGRILRVWGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...CCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CACCGGGCTTCCCAGCTTTCCCTTGTGAGGCCAGTGAGGAATGCTGATTCTGGAAGTGCCCCATTCCAGTaGAAAGAGGAGCTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: HRASQLSLVRPVRNADSGSAPFQ*KEELSW
Trigger: CCAACTCAGCTCCTCTTTGCACTGGAATGGGGCACT...TCCAGAATCAGCATTCCTCACTGGCCTCACAAGGGAAAGCTGGGAAGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR GCA 90 bp GCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATTACACTCAGCCTCCTaGAGGGAGGACAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: ANCCMKTRATFSGRILRVLHSAS*REDRQL
Trigger: GAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAA...TACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGATCACGAGTGTCCTTCTaGGAGACAGGAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: CRALANCCMKTRATFSGRSRVSF*ETGDLG
Trigger: CCCCAAATCTCCTGTCTCGCAGAAGGACACTCGTGA...TCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562161.5
CDS-3UTR CCA 90 bp TGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTAGGCCTTGTACACCGTaGCGTACGTGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CFSSHGDMCCAKPKSASFRPCTP*RTCRCP
Trigger: TGGGCAGCGGCACGTACGCCACGGTGTACAAGGCCT...AAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACAGGCCTTGTACACCGTaGCGTACGTGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NLREEVLHRCLVQTFLGYRPCTP*RTCRCP
Trigger: TGGGCAGCGGCACGTACGCCACGGTGTACAAGGCCT...GTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp AATGATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACCACGAGTGTCCTTCTTaGCGTAGGCCTTGTACACCG +
Preference number: 4 (lower is better)
Translates to: NDRGLHAPKRTGTGPSNHHECPS*RRPCTP
Trigger: CGGTGTACAAGGCCTACGCCAAGAAGGACACTCGTG...GTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440863.7
ENST00000569437.5
CDS-3UTR CCA 90 bp GCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: ARQGCSGPLHSWRQPGLVWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGATTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GELDDPVATDLLFQLRERFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...TCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATGGCGGGCAGGTGTGAGTTCCCAGAAAGACTGGTGGGTTCTGTGGGGCTGAGTTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: MAGRCEFPERLVGSVGLSFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...ACTCAGCCCCACAGAACCCACCAGTCTTTCTGGGAACTCACACCTGCCCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGCCAGACTCTCCCCACTaGGCATGTGCTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VSAPLLQMAHICPIILLGPDSPH*ACAPGP
Trigger: TGGACCTGGAGCACATGCCCAGTGGGGAGAGTCTGG...CCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCCTCCTCCTTGGCCATaGCAGCTGAAGCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: MSNALEDLNLREEVLHRCPPPWP*QLKPLP
Trigger: TGGAAGTGGCTTCAGCTGCCATGGCCAAGGAGGAGG...GCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGCCTCCTCCTTGGCCATaGCAGCTGAAGCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: CTMWGCRMPLRISISVRRPPPWP*QLKPLP
Trigger: TGGAAGTGGCTTCAGCTGCCATGGCCAAGGAGGAGG...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AACCAAAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTCGGCGGCCTCCTCCTTaGCCATGGCAGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: NQSLPVLGGASPRSSVECRRPPP*PWQLKP
Trigger: TGGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCG...ACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IQHSHQTICGVQSNLREAFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LPSSIQHSHQTICGVQSNGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...GTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CACTTCACGAGTGTCCTTCTACTGCACACCAGCACCGGGCTTCCCAGCTTTCCCAAAGAGGAGCTGAGTTaGAATAAGGGGTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: HFTSVLLLHTSTGLPSFPKEELS*NKGSRE
Trigger: TTCCCGGGACCCCTTATTCCAACTCAGCTCCTCTTT...GGGAAAGCTGGGAAGCCCGGTGCTGGTGTGCAGTAGAAGGACACTCGTGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CCA 90 bp GAAGGGTGCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTATACTGTGGGGAGGGTaGTCCCTGAGGGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: EGCKSYEQIPTVPLCPGCILWGG*SLRGVG
Trigger: TCCAACACCCCTCAGGGACCACCCTCCCCACAGTAT...ACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGCACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CCA 90 bp ATGATACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAAGGCCTAGAAGTGGGTaGCCTAGAGGGCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: MILFTLSLLQGGQTALAQRPRSG*PRGHWV
Trigger: GACCCAGTGCCCTCTAGGCCACCCACTTCTAGGCCT...TTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
3UTR CAA 72 bp GTGCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTaGTCCAGGGTGTCAGCTTCCCAGCGAGATTCCCTC +
Preference number: 4 (lower is better)
Translates to: VQELRTDSDSPS*SRVSASQRDSL
Trigger: GAGGGAATCTCGCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 4 (lower is better)
Translates to: CTMWGCRMPLRISISVRRGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp ACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 4 (lower is better)
Translates to: TCFSSHGDMCCAKPKSASGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...ACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: RILRVWMKRDRSPPAQNSLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...GGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGTCACTTGCCTCAGCAGGGCCTaGTTGGAAGAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: CPSAPDGSHLSNHSSRVTCLSRA*LEEETM
Trigger: CATCGTCTCCTCTTCCAATCAGGCCCTGCTGAGGCA...AGTGACCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCATTCAGCTCGGGCCATaGGGTTCTGAACCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SYEQIPTVPLCPGCQLPSIQLGP*GSEPQC
Trigger: ACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAAT...GCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGGGGTGCAGAGTAACCTaGGGGAGGCTGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: GGSPPMPCSDFSWLHTLWGCRVT*GRLGTL
Trigger: CAGAGTCCCCAGCCTCCCTCAGGTTACTCTGCACCC...CCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGTAACAAAGGTCTCATaGAAGAAGTGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLRQNPAGMDEARQVAPCVTKVS*KKCCSP
Trigger: GGGAGAACAGCACTTCTTTCATGAGACCTTTGTTAC...GCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GATATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGACCAAGGAACCCTCCTaGGTGCTCCCTAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DIVTVPLKVFQLHNVGMSTKEPS*VLPRPG
Trigger: CCCTGGCCTAGGGAGCACTCAGGAGGGTTCCTTGGT...CGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR TCA 90 bp CGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGACCTGGAGGCAAAGGGGTCTCAGGCAGAATCCTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: RLLRIFSSSSENDLEAKGSQAES*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGGATTCTGCCTGAGA...CCCCTTTGCCTCCAGGTCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000568273.5
CDS-3UTR GCA 90 bp CCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PSKKPARQGCSGPLHSWREVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...ACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: GCRMPLRISISVRRFSTDRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...ATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: CTMWGCRMPLRISISVRRRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp AGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAAGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: RQNPAGMDEARQVAPCAKEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...TTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GARASHPTGTCVVRNQSLRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...CAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTACGCGGGCGTCATACTaGCGCTGGCACACCATCTCG +
Preference number: 4 (lower is better)
Translates to: KSASFRWGFSKELSRMFCTRASY*RWHTIS
Trigger: CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGT...ACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWRSPEP*SRVIRQ
Trigger: CTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCT...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATGTACTGCCCCACCTTTaGCTTAATTGCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: LYTQPPAGRTDSSCPRKHVLPHL*LNCLLP
Trigger: CGGAAGGAGGCAATTAAGGCAAAGGTGGGGCAGTAC...ATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGGTACTGCCCCACCTTTaGCTTAATTGCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: ALANCCMKTRATFSGRILVLPHL*LNCLLP
Trigger: CGGAAGGAGGCAATTAAGGCAAAGGTGGGGCAGTAC...CAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCAATCATTCTTCTAGGGTCACTGAAGGGTGCAAGAGCTACGAACAGATTCCGAAGCTCCCCCAGGCTGTaGTGGTACAGGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PIILLGSLKGARATNRFRSSPRL*WYRSRA
Trigger: TGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCT...TCGGAATCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCTAGAAGAATGATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAAAGGGTCACTGAAGGGTaGAAGAGCTACGAACAGATT +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQRVTEG*KSYEQI
Trigger: AATCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCT...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATAAGTGCCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: ISAHAVGCEGISPIEEMGGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...CCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGGCACTTAT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGGGGTTAGTGCCCCTCTaGTCCAGATGGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: CTMWGCRMPLRISISVRRGLVPL*SRWLTS
Trigger: AGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCC...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATAAGTGCCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGTTACACTCAGCCTCCTaGAGGGAGGACAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: ISAHAVGCEGISPIEEMGLHSAS*REDRQL
Trigger: GAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAA...CCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGGCACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: HLLRQNPAGMDEARQVAPWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...GGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp AGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: RALANCCMKTRATFSGRIRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...GATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp TGCAGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CRNCRALANCCMKTRATFSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...GAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCAAAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCCCAGACTCTCCCCACTaGGCATGTGCTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PKSASFRWGFSKELSRMFPDSPH*ACAPGP
Trigger: TGGACCTGGAGCACATGCCCAGTGGGGAGAGTCTGG...GAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGGGCATCCACTTCATAGTGCAGGGCAGGTACAAAGAAGTCCAGAGCCTTGCAGCTGAATCCCCCTCCTaGTCTTTCTTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGIHFIVQGRYKEVQSLAAESPS*SFFTAC
Trigger: GCAGGCTGTGAAGAAAGACCAGGAGGGGGATTCAGC...TGCAAGGCTCTGGACTTCTTTGTACCTGCCCTGCACTATGAAGTGGATGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGCAGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 4 (lower is better)
Translates to: CRNCRALANCCMKTRATFPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...GAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GCAAGAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: ARATNRFRQSLFVQGVSFGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...GAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LPSSIQHSHQTICGVQSNGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...GTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGGGGACTCTGGGATATaGGGGTCTCAGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: SIQHSHQTICGVQSNLREGDSGI*GSQHCP
Trigger: TGGACAGTGCTGAGACCCCCATATCCCAGAGTCCCC...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGATACTGTGGGGAGGGTaGTCCCTGAGGGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SIQHSHQTICGVQSNLREILWGG*SLRGVG
Trigger: TCCAACACCCCTCAGGGACCACCCTCCCCACAGTAT...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGAGGCTGGGAGGGAATaGGTCAAGCCTGGCCTGACG +
Preference number: 4 (lower is better)
Translates to: KSASFRWGFSKELSRMFCEAGRE*VKPGLT
Trigger: CGTCAGGCCAGGCTTGACCCATTCCCTCCCAGCCTC...ACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR TCA 90 bp ATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: MPLRISISVRRFSTDALFASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...GAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp GAGCCACGGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EPRSTCFSSHGDMCCAKPEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...TGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCATGGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILRVWMKRDRSPPAQNSMEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...CATGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp CTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: LNLREEVLHRCLVQTFLGRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...GCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp TCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: SFLASAWVSAPLLQMAHIEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...GATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGGGCGCCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VASDPGERYSVHAGIAGRRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...GCGCCCTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTGTACTGCCCCACCTTTaGCTTAATTGCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: RASHPTGTCVVRNQSLPVVLPHL*LNCLLP
Trigger: CGGAAGGAGGCAATTAAGGCAAAGGTGGGGCAGTAC...AACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTTGAGCTCCTCAGCCCGGGACACGTACTGCCCCACCTTTGCCTTAATTGCCTCTCCCTCATCTTGACCTaGTCCTTCAAGTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: LELLSPGHVLPHLCLNCLSLILT*SFKYSA
Trigger: AGCTGAATACTTGAAGGAGCAGGTCAAGATGAGGGA...GAGGCAATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATTAGTGCCCCATTCCAGTaGAAAGAGGAGCTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FTLSLLQGGQTALAQGSISAPFQ*KEELSW
Trigger: CCAACTCAGCTCCTCTTTGCACTGGAATGGGGCACT...AATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTCGAGATTCCCTCATCTaGTCCTTCAAGTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: TFSGRILRVWMKRDRSPPRDSLI*SFKYSA
Trigger: AGCTGAATACTTGAAGGAGCAGATGAGGGAATCTCG...AGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568210.5
CDS-3UTR GCA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAACGAGATTCCCTCATCTaGTCCTTCAAGTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQRDSLI*SFKYSA
Trigger: AGCTGAATACTTGAAGGAGCAGATGAGGGAATCTCG...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
CDS-3UTR GCA 90 bp ATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCATGGCTGATCCATTTCTTTaGATTCTTGGCGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ILRVWMKRDRSPPAQNSMADPFL*ILGVGL
Trigger: AAGGCCTACGCCAAGAATGCAAAGAAATGGATCAGC...CATGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp ATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGATTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: MKTRATFSGRILRVWMKRFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...TCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp AATGATAGAGGGCTGCATGCCCCAAAACGGACAGGCACAGGACCCAGTAACCACTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: NDRGLHAPKRTGTGPSNHFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...GTGGTTACTGGGTCCTGTGCCTGTCCGTTTTGGGGCATGCAGCCCTCTATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: MPLRISISVRRFSTDALFRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...GAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp GGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GCRMPLRISISVRRFSTDSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...ATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SCTMWGCRMPLRISISVRSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...CCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTTCAGCAGGGCCTGATTaGAAGAGGAGACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: NALEDLNLREEVLHRCLVSAGPD*KRRRWP
Trigger: AGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA...AACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 4 (lower is better)
Translates to: TCFSSHGDMCCAKPKSASPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...ACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATTCCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 4 (lower is better)
Translates to: FTLSLLQGGQTALAQGSIPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...AATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTTCTTGGCGTCAGCCTaGGTTAGTGCCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: REEVLHRCLVQTFLGYTLFLASA*VSAPLL
Trigger: GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA...AAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTAGAACCCTTCAGAAGTaGCCCAGAGAGGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: VLLIPRGHVLCETKVCQFRTLQK*PREALP
Trigger: AGGCAAGGCCTCTCTGGGCCACTTCTGAAGGGTTCT...AAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR CCA 90 bp AGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGCTGATTCTGGAATCCTaGCTTCCCGACACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCTMWGCRMPLRISISVRLILES*LPDTAS
Trigger: TGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAG...CCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp CCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGCAAAACTCCATGATATTTCTTTGCATTCTTaGCGTAGGCCTTGTACACCG +
Preference number: 4 (lower is better)
Translates to: PAGMDEARQVAPCAKLHDISLHS*RRPCTP
Trigger: CGGTGTACAAGGCCTACGCCAAGAATGCAAAGAAAT...ATCATGGAGTTTTGCGCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp GTTCTGTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGGGGCTTCATACAGGATaGCCCCCATGGACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLWLQIQVRDIPFMQELQGLHTG*PPWTRG
Trigger: ACCTCTGGTCCATGGGGGTCATCCTGTATGAAGCCC...CTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp ATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAATGCAAGGGGAGCTCGATaGCCCGGTTGCTACGGATCT +
Preference number: 4 (lower is better)
Translates to: IVTVPLKVFQLHNVGMSNARGAR*PGCYGS
Trigger: AGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGC...ATTCGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATGCAAGGGGAGCTCGATaGCCCGGTTGCTACGGATCT +
Preference number: 4 (lower is better)
Translates to: KVFQLHNVGMSNALEDLNARGAR*PGCYGS
Trigger: AGATCCGTAGCAACCGGGTCATCGAGCTCCCCTTGC...ATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGATTCAGCTCGGGCCATaGGGTTCTGAACCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SIQHSHQTICGVQSNLREIQLGP*GSEPQC
Trigger: ACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAAT...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SASFRWGFSKELSRMFCGASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...GCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp CTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LEDLNLREEVLHRCLVQTASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...AGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp ACTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TVHPRSLLARAAVGHFILEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...AAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: SLPVLGGASPRSSVECSVRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTAGACAGGTCGCCCCCTaGGCAAAACTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: EDLNLREEVLHRCLVQTFRQVAP*AKLHDE
Trigger: CTCATCATGGAGTTTTGCGCAGGGGGCGACCTGTCT...AAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp TTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTGCGCTAGCTAATTGCTaGATGAAGACACGCGCCACC +
Preference number: 4 (lower is better)
Translates to: LRISISVRRFSTDALFRLALANC*MKTRAT
Trigger: GGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC...AAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp TCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: SISVRRFSTDALFRLFLARALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp AGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: STCFSSHGDMCCAKPKSAEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...GGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: RALANCCMKTRATFSGRIEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...GATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NALEDLNLREEVLHRCLVRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...AACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATGATACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAACGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MILFTLSLLQGGQTALAQRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...TTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ACCTTCTCAGGCAGAATCCTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGTCTTTCTTCACAGCCTaGACCACCAGGGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TFSGRILKVFQLHNVGMSSFFTA*TTRAVA
Trigger: AGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGA...CGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGGATTCTGCCTGAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568273.5
CDS-3UTR GCA 90 bp TGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTACTGCACACCAGTCTTTCTTCACAGCCTaGACCACCAGGGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: WLHTLWLPLHECPSTAHQSFFTA*TTRAVA
Trigger: AGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGA...CTGGTGTGCAGTAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR GCA 90 bp TTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLHEDTRHLLRQNPAGMDRSPEP*SRVIRQ
Trigger: CTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCT...ATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATGATACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAACACCTTTGCCTTAATTaGCTCCTTCCGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: MILFTLSLLQGGQTALAQHLCLN*LLPLGI
Trigger: GATGCCCAGCGGAAGGAGGCAATTAAGGCAAAGGTG...TTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTCACCTTTGCCTTAATTaGCTCCTTCCGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: VLLIPRGHVLCETKVCQFHLCLN*LLPLGI
Trigger: GATGCCCAGCGGAAGGAGGCAATTAAGGCAAAGGTG...AAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCGTACTGCCCCACCTTTaGCTTAATTGCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SASFRWGFSKELSRMFCGVLPHL*LNCLLP
Trigger: CGGAAGGAGGCAATTAAGGCAAAGGTGGGGCAGTAC...GCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAAGGGTCACTGAAGGGTaGAAGAGCTACGAACAGATT +
Preference number: 4 (lower is better)
Translates to: LHEDTRHLLRQNPAGMDERVTEG*KSYEQI
Trigger: AATCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCT...TTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 4 (lower is better)
Translates to: SFSCTMWGCRMPLRISISVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...GGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 4 (lower is better)
Translates to: PVLGGASPRSSVECSVASVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...TGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATGATACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAAGTGCCCCATTCCAGTaGAAAGAGGAGCTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: MILFTLSLLQGGQTALAQSAPFQ*KEELSW
Trigger: CCAACTCAGCTCCTCTTTGCACTGGAATGGGGCACT...TTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGATCGAGTGTCCTTCTACTaGACACCAGCACCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VLGGASPRSSVECSVASDRVSFY*TPAPGF
Trigger: GAAGCCCGGTGCTGGTGTGCAGTAGAAGGACACTCG...ATCTGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGCTGATCCATTTCTTTaGATTCTGGAGTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RNCRALANCCMKTRATFSADPFL*ILECSR
Trigger: CCGGGAGCACTCCAGAATGCAAAGAAATGGATCAGC...TGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565790.5
CDS-3UTR CCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGCACGAGTGTCCTTCTTaGCGTAGGCCTTGTACACCG +
Preference number: 4 (lower is better)
Translates to: SLPVLGGASPRSSVECSVHECPS*RRPCTP
Trigger: CGGTGTACAAGGCCTACGCCAAGAAGGACACTCGTG...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563301.5
ENST00000566631.5
CDS-3UTR CCA 90 bp GCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: ARQGCSGPLHSWRQPGLVCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LHNVGMSNALEDLNLREEFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...CTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp AGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCATTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RNCRALANCCMKTRATFSFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...TGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATGATACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: MILFTLSLLQGGQTALAQRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...TTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VLLIPRGHVLCETKVCQFSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...AAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACATCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LREEVLHRCLVQTFLGYTSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...TGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGTCACTTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CPSAPDGSHLSNHSSRVTSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...AGTGACCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGCTACTCGCCAGGGCTGCAGTaGGCCACTTCATTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: VLHRCLVQTFLGYTLYGYSPGLQ*ATSFLA
Trigger: CGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA...GTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGACACAGCCTCAGCCTaGTCTTCTCCAACCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RRFSTDALFRLFLATHFMDTASA*SSPTLG
Trigger: GCCGAGGGTTGGAGAAGACCAGGCTGAGGCTGTGTC...CATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp ACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCCTGATTCTGGAATCCTaGCTTCCCGACACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TMWGCRMPLRISISVRRFLILES*LPDTAS
Trigger: TGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAG...GAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp GTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGGGCGCTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: VASDPGERYSVHAGIAGRLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...GCGCCCTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp ATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: MWGCRMPLRISISVRRFSLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...GGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: IQHSHQTICGVQSNLREALSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440863.7
ENST00000568210.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACGTAACAAAGGTCTCATaGAAGAAGTGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VGMSNALEDLNLREEVLHVTKVS*KKCCSP
Trigger: GGGAGAACAGCACTTCTTTCATGAGACCTTTGTTAC...GTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AACCAAAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTCACCATACAGGATaGCCCCCATGGACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NQSLPVLGGASPRSSVECSHHTG*PPWTRG
Trigger: ACCTCTGGTCCATGGGGGTCATCCTGTATGGTGAGA...ACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR TCA 90 bp TCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTCAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: SNALEDLNLREEVLHRCLQPSAS*SISLHS
Trigger: AGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTG...AAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp GTCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VFQLHNVGMSNALEDLNLASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...GAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLPVLGGASPRSSVECSVASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ALANCCMKTRATFSGRILEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...CAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp TTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATTGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: FTLSLLQGGQTALAQGSIEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...AATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTACTGCACACCAGCGGGGACATGTGTTGTaGGAAACCAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: WLHTLWLPLHECPSTAHQRGHVL*ETKVCQ
Trigger: CTGGCAGACTTTGGTTTCGCACAACACATGTCCCCG...CTGGTGTGCAGTAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR GCA 90 bp AAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTTCTTTCTTCACAGCCTaGACCACCAGGGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KSASFRWGFSKELSRMFCSFFTA*TTRAVA
Trigger: AGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGA...ACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CTMWGCRMPLRISISVRRRSPEP*SRVIRQ
Trigger: CTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCT...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCACCTTTGCCTTAATTaGCTCCTTCCGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: VFQLHNVGMSNALEDLNLHLCLN*LLPLGI
Trigger: GATGCCCAGCGGAAGGAGGCAATTAAGGCAAAGGTG...GAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp AACCAAAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTGCCCGGGACACGTACTaGCCCACCTTTGCCTTAATT +
Preference number: 4 (lower is better)
Translates to: NQSLPVLGGASPRSSVECARDTY*PTFALI
Trigger: AATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGC...ACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGGGCGCAGGGTCACTGAAGGGTaGAAGAGCTACGAACAGATT +
Preference number: 4 (lower is better)
Translates to: VASDPGERYSVHAGIAGRRVTEG*KSYEQI
Trigger: AATCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCT...GCGCCCTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGAGGGTCACTGAAGGGTaGAAGAGCTACGAACAGATT +
Preference number: 4 (lower is better)
Translates to: LHNVGMSNALEDLNLREERVTEG*KSYEQI
Trigger: AATCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCT...CTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAATCACGAGTGTCCTACTaGACACCAGCACCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: YCHCPTESLSAAQCGDVESRVSY*TPAPGF
Trigger: GAAGCCCGGTGCTGGTGTGCAGTAGGACACTCGTGA...TTCGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565373.5
CDS-3UTR CCA 90 bp AGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SIQHSHQTICGVQSNLREFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...CTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: NVGMSNALEDLNLREEVLFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...GAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLPVLGGASPRSSVECSVRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: EDLNLREEVLHRCLVQTFRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...AAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGCTACCACTCAGCAGGGCCTGATTaGAAGAGGAGACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LHRCLVQTFLGYTLYGYHSAGPD*KRRRWP
Trigger: AGGCCATCGTCTCCTCTTCCAATCAGGCCCTGCTGA...GTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AGATATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGCCCCATTGAAGAGATaGGGAGACCCAGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RYCHCPTESLSAAQCGDVAPLKR*GDPGPE
Trigger: TTCTGGGCCTGGGTCTCCCCATCTCTTCAATGGGGC...GACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CCA 90 bp ACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTCTGATTCTGGAATCCTaGCTTCCCGACACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TVPLKVFQLHNVGMSNALLILES*LPDTAS
Trigger: TGAGGCTGTGTCGGGAAGCCAGGATTCCAGAATCAG...AAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp GTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGATGCGAGACAGGAGATTTaGGGACTCTGCTGCACACCA +
Preference number: 4 (lower is better)
Translates to: VLGGASPRSSVECSVASDARQEI*GLCCTP
Trigger: TGGTGTGCAGCAGAGTCCCCAAATCTCCTGTCTCGC...ATCTGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562161.5
CDS-3UTR TCA 90 bp TGTTCTGTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGGATCTCAATCTCCGTaGGGAGGTTCTCCACCGATG +
Preference number: 4 (lower is better)
Translates to: CSVASDPGERYSVHAGIAGSQSP*GGSPPM
Trigger: CATCGGTGGAGAACCTCCTCACGGAGATTGAGATCC...TGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTAGGGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: FSSHGDMCCAKPKSASFRGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...CCTAAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SFSCTMWGCRMPLRISISGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...GGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: CFSSHGDMCCAKPKSASFGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...AAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp ACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCCAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: TMWGCRMPLRISISVRRFQPSAS*SISLHS
Trigger: AGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTG...GAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp AATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: NVGMSNALEDLNLREEVLQPSAS*SISLHS
Trigger: AGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTG...GAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp TCTTGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTACTGCACACGCCAGTGAGGAATGCTaGTTCTGGAATCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SWLHTLWLPLHECPSTAHASEEC*FWNPGF
Trigger: GAAGCCAGGATTCCAGAATCAGCATTCCTCACTGGC...GTGTGCAGTAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp AGGAATTGCAGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RNCRALANCCMKTRATFSEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...TGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCTGCAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGCTACCACTAGGGCGCTAGCTAATTaGTGCATGAAGACACGCGCC +
Preference number: 4 (lower is better)
Translates to: STDALFRLFLATHFMATTRALAN*CMKTRA
Trigger: GGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT...AGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp ACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: TMWGCRMPLRISISVRRFEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...GAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: MPLRISISVRRFSTDALFWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...GAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp TGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: CPSKKPARQGCSGPLHSWCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...CCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGACCTGGAGGCAAAGGGGTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: RLLRIFSSSSENDLEAKGCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...CCCCTTTGCCTCCAGGTCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTAGGTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FSSHGDMCCAKPKSASFRFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...CCTAAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGCAGAATCCTGCGGGTATaGATGAAGCGAGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: EVLHRCLVQTFLGYTLYGRILRV*MKRDRS
Trigger: CGACCTGTCTCGCTTCATCCATACCCGCAGGATTCT...GCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp ATCTGTCCAATCATTCTTCTAGGGTCACTGAAGGGTGCAAGAGCTACGAACAGAGGGCCACTTCATTCTTaGCGTCAGCCTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: ICPIILLGSLKGARATNRGPLHS*RQPGLV
Trigger: CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCC...TCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCTAGAAGAATGATTGGACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp AGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGTTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: SLPVLGGASPRSSVECSVLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...CACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GCCCCCTGCGCAAAACTCCATGATGAGGTAGATATTGTCACTGTCCCACTGAAATTGTCACTGTCCCACTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: APCAKLHDEVDIVTVPLKLSLSH*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAA...TTTCAGTGGGACAGTGACAATATCTACCTCATCATGGAGTTTTGCGCAGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp ATGATACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGTAACAAAGGTCTCATaGAAGAAGTGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MILFTLSLLQGGQTALAQVTKVS*KKCCSP
Trigger: GGGAGAACAGCACTTCTTTCATGAGACCTTTGTTAC...TTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTCAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: CFSSHGDMCCAKPKSASFQPSAS*SISLHS
Trigger: AGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTG...AAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp GTCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: VFQLHNVGMSNALEDLNLQPSAS*SISLHS
Trigger: AGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTG...GAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp TGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTTCTCAGGCAGAATCCTaGAAGTCTTTCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: CFSSHGDMCCAKPKSASFSQAES*KSFSCT
Trigger: TGTGCAGCTGAAAGACTTTCAGGATTCTGCCTGAGA...AAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000568273.5
CDS-3UTR GCA 90 bp TGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGTCACTGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CPSAPDGSHLSNHSSRVTEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...AGTGACCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTAGGGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: FSSHGDMCCAKPKSASFREIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...CCTAAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CCTCATCTTGACCTGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTGAACTCCCTCATCTTGACCTaGTCCTTCAAGTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: PHLDLLLQVFSSGHEVLNSLILT*SFKYSA
Trigger: AGCTGAATACTTGAAGGAGCAGGTCAAGATGAGGGA...GTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAGGTCAAGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCAGGGCGCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: WLQIQVRDIPFMQELQGAWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...AGCGCCCTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGCTACCACTTCAGCTGCACAATGTaGGGATGTCGAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LHRCLVQTFLGYTLYGYHFSCTM*GCRMPL
Trigger: CAAGGGCATTCGACATCCCCACATTGTGCAGCTGAA...GTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp TCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGCTACCACTTCTGCCAGTTTTAGGTaGGGCTTCTCCAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: STDALFRLFLATHFMATTSASFR*GFSKEL
Trigger: GAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA...AGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp ATCTGTCCAATCATTCTTCTAGGGTCACTGAAGGGTGCAAGAGCTACGAACAGACCCCTCTGCTCCAGATaGCTCACATCTGTCCAATCA +
Preference number: 4 (lower is better)
Translates to: ICPIILLGSLKGARATNRPLCSR*LTSVQS
Trigger: TGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGG...TCTGTTCGTAGCTCTTGCACCCTTCAGTGACCCTAGAAGAATGATTGGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGTTCTGTGGCTTCAGATCCAGGTGAGAGATATTCCGTTCATGCAGGAATTGCACATTTCTTTGCATTCTaGAGTGCTCCCGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: CSVASDPGERYSVHAGIAHFFAF*SAPGRG
Trigger: GCCTCTGCCGGGAGCACTCCAGAATGCAAAGAAATG...TGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565790.5
CDS-3UTR TCA 90 bp AGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATGGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGC +
Preference number: 4 (lower is better)
Translates to: RRFSTDALFRLFLATHFMGFRSR*EIFRSC
Trigger: GCATGAACGGAATATCTCTCACCTGGATCTGAAGCC...CATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR TCA 90 bp TTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTGTAACAAAGGTCTCATaGAAGAAGTGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LRISISVRRFSTDALFRLVTKVS*KKCCSP
Trigger: GGGAGAACAGCACTTCTTTCATGAGACCTTTGTTAC...AAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp GTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGATAGAAGTCCAGAGCCTTaGAGTAGAGTGATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLGGASPRSSVECSVASDRSPEP*SRVIRQ
Trigger: CTGCCTTATCACTCTACTGCAAGGCTCTGGACTTCT...ATCTGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp TCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCCGAGATTCCCTCATCTaGTCCTTCAAGTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: SFSCTMWGCRMPLRISISRDSLI*SFKYSA
Trigger: AGCTGAATACTTGAAGGAGCAGATGAGGGAATCTCG...GGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000568273.5
CDS-3UTR CCA 90 bp AAGCAGGGAAAAGAGGTCTCACCATACAGGATGACCCCCATGGACCAGAGGTCCTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: KQGKEVSPYRMTPMDQRSCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...GGACCTCTGGTCCATGGGGGTCATCCTGTATGGTGAGACCTCTTTTCCCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR CCA 90 bp AGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: STCFSSHGDMCCAKPKSACSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...GGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: WGCRMPLRISISVRRFSTCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...GGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp TATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAACAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: YCHCPTESLSAAQCGDVEQPSAS*SISLHS
Trigger: AGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTG...TTCGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp CTCCATGATGAGGTAGATATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACGAGATATTCCGTTCATaGAGGAATTGCAGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: LHDEVDIVTVPLKVFQLHEIFRS*RNCRAL
Trigger: TAGCGCCCTGCAATTCCTGCATGAACGGAATATCTC...GTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATATCTACCTCATCATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR CCA 90 bp AAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: KSASFRWGFSKELSRMFCWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...ACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000562161.5
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp GTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGATTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: VLGGASPRSSVECSVASDWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...ATCTGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
3UTR CAA 72 bp ATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCTACACACTTTATGGCT +
Preference number: 4 (lower is better)
Translates to: ISISVRRFSTDA*FRLFLATHFMA
Trigger: AGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR TCA 90 bp CTCTCAAATACATTCTTTTCCAGGTTAAATTCACTTTGTCCTCATAAGTGCCCAGATGGCGGGCAGGTGTaGGTTCCCAGAAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: LSNTFFSRLNSLCPHKCPDGGQV*VPRKTG
Trigger: ACCAGTCTTTCTGGGAACTCACACCTGCCCGCCATC...TGGGCACTTATGAGGACAAAGTGAATTTAACCTGGAAAAGAATGTATTTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR GCA 90 bp ATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAATGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IVTVPLKVFQLHNVGMSNEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...ATTCGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp CTCCATGATGAGGTAGATATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LHDEVDIVTVPLKVFQLHEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...GTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATATCTACCTCATCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR GCA 90 bp AGATATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAGGTTCTCCACCGATaGCTTGTTCAGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RYCHCPTESLSAAQCGDVEVLHR*LVQTFL
Trigger: AAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTC...GACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp AGATATTGTCACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCTGGCTACACACTTTATaGCTACCACTTCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: RYCHCPTESLSAAQCGDVWLHTL*LPLHEC
Trigger: ACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA...GACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGTGACAATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp CTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACATGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: LREEVLHRCLVQTFLGYTCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...TGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp ACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: TMWGCRMPLRISISVRRFCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...GAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CCA 90 bp CTGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTGAACCTCAGTGTGAAGTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: LLLQVFSSGHEVLNLSVKCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...CTTCACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR GCA 90 bp CTCTCAAATACATTCTTTTCCAGGTTAAATTCACTTTGTCCTCATAAGTGCCCAGTTCTCCCAGAGTCCTaGCCTCCCCTCCAGTATACA +
Preference number: 4 (lower is better)
Translates to: LSNTFFSRLNSLCPHKCPVLPES*PPLQYT
Trigger: TGTATACTGGAGGGGAGGGCAGGACTCTGGGAGAAC...TGGGCACTTATGAGGACAAAGTGAATTTAACCTGGAAAAGAATGTATTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CCA 90 bp CCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCATGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: PVLGGASPRSSVECSVASCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...TGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CCA 90 bp TTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTGTTCAGACTTTTCTTaGCTACACACTTTATGGCTA +
Preference number: 4 (lower is better)
Translates to: LRISISVRRFSTDALFRLCSDFS*LHTLWL
Trigger: TAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACA...AAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CAA 90 bp CCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTGCTCCGGCGGCCTCCTCCTaGGCCATGGCAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: PAVSGEQGPQGELDDPVAPAASS*AMAAEA
Trigger: GGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCGG...AGCAACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGAGGAGACGATGGCCTaGAGCTCCTCAGCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: PMDQRSTRASYCRWHTISEETMA*SSSARD
Trigger: GTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTC...CGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGGAGGAGACGATGGCCTaGAGCTCCTCAGCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: PCPRLKLQHKARAVASVGEETMA*SSSARD
Trigger: GTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTC...CCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCCGGCGGCCTCCTCCTaGGCCATGGCAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: PGLQWATSFLASAWVSAPPAASS*AMAAEA
Trigger: GGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCGG...AGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCGGCGGCCTCCTCCTaGGCCATGGCAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: ARQGCSGPLHSWRQPGLVPAASS*AMAAEA
Trigger: GGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCGG...CACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GTCCCGGCAGTCTCGGGAGAGCAGGGGCCGCAAGGGGAGCTCGATGACCCGGTTAGCTCGATGACCCGGTaGCTACGGATCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: VPAVSGEQGPQGELDDPVSSMTR*LRIFSS
Trigger: GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCT...AACCGGGTCATCGAGCTCCCCTTGCGGCCCCTGCTCTCCCGAGACTGCCGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAAGCACCACCAGGGCGGTaGCTCGCCCCAGACTCTCCC +
Preference number: 5 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQAPPGR*LAPDSP
Trigger: GGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGC...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTGAGGAGACGATGGCCTaGAGCTCCTCAGCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPEETMA*SSSARD
Trigger: GTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTC...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TGGCAGGGCGAGGGCAAGCACAGAAGTACCCTGCGGGGGCCCCTTGCCCTCTTCTCCGACAGTCCCTCTTaGTCCAGGGTGTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: WQGEGKHRSTLRGPLALFSDSPS*SRVSAS
Trigger: GGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGA...GAAGAGGGCAAGGGGCCCCCGCAGGGTACTTCTGTGCTTGCCCTCGCCCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTGAAAGGGGAAAGAGCTaGCCCAGGGCTCCACGGCGG +
Preference number: 5 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPERGKS*PRAPRR
Trigger: CCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTTC...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTCCCCACTGGGCATGTGCGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: ACTTRAVARPRLSPLGMCGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...GCACATGCCCAGTGGGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCGCTAGGAGGCGTGGCTaGTCCCGGGCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LQWATSFLASAWVSAPLLARRRG*SRAISL
Trigger: CAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC...GAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTCGGGGGCCATGTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: QRSTRASYCRWHTISGAMWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...CATGGCCCCCGAGATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CTGCCCTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGACCCTGCGGGGGCCCCTaGCCCTCTTCTCGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: LPSPPVYSTAIKPSVGCRPCGGP*PSSRSQ
Trigger: TTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGGG...TCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGGCACCACCAGGGCGGTaGCTCGCCCCAGACTCTCCC +
Preference number: 5 (lower is better)
Translates to: RMPLRISISVRRFSTDALAPPGR*LAPDSP
Trigger: GGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGC...CAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AGGGCGCTAGCTAATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCGCACCACCAGGGCGGTaGCTCGCCCCAGACTCTCCC +
Preference number: 5 (lower is better)
Translates to: RALANCCMKTRATFSGRIAPPGR*LAPDSP
Trigger: GGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGC...GATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATTAGCTAGCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GGGGAGCTCGATGACCCGGTTGCTACGGATCTTCTCTTCCAGCTCCGAGAACGAGCTAGGAGGCGTGGCTaGTCCCGGGCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GELDDPVATDLLFQLRERARRRG*SRAISL
Trigger: CAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC...TCGTTCTCGGAGCTGGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAAGCTAGGAGGCGTGGCTaGTCCCGGGCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQARRRG*SRAISL
Trigger: CAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GAGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCCGGCGGCCTCCTCCTaGGCCATGGCAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: ELRTDSDSPSLSRVSASQPAASS*AMAAEA
Trigger: GGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCGG...CTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGACCCTGCGGGGGCCCCTaGCCCTCTTCTCGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: MKTRATFSGRILRVWMKRPCGGP*PSSRSQ
Trigger: TTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGGG...TCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CAA 90 bp GAAGAGGAGACGATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCCACCAGCTCGATGACCCGGTaGCTACGGATCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: EEETMALSSSARDTYCPTSSMTR*LRIFSS
Trigger: GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCT...GGTGGGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCACCACCAGGGCGGTaGCTCGCCCCAGACTCTCCC +
Preference number: 5 (lower is better)
Translates to: YSLHSASCREDRQLLPKEAPPGR*LAPDSP
Trigger: GGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGC...TTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTGCACCACCAGGGCGGTaGCTCGCCCCAGACTCTCCC +
Preference number: 5 (lower is better)
Translates to: TCFSSHGDMCCAKPKSASAPPGR*LAPDSP
Trigger: GGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGC...ACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGGCACCACCAGGGCGGTaGCTCGCCCCAGACTCTCCC +
Preference number: 5 (lower is better)
Translates to: CTMWGCRMPLRISISVRRAPPGR*LAPDSP
Trigger: GGGAGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGC...CCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ACTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGAGGAGACGATGGCCTaGAGCTCCTCAGCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: TVHPRSLLARAAVGHFILEETMA*SSSARD
Trigger: GTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTC...AAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CTGCCCTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGCTAGGAGGCGTGGCTaGTCCCGGGCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LPSPPVYSTAIKPSVGCRARRRG*SRAISL
Trigger: CAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC...TCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TACTCTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAACCGGCGGCCTCCTCCTaGGCCATGGCAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: YSLHSASCREDRQLLPKEPAASS*AMAAEA
Trigger: GGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCGG...TTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAGAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCCCTGCGGGGGCCCCTaGCCCTCTTCTCGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: LPSSIQHSHQTICGVQSNPCGGP*PSSRSQ
Trigger: TTGGCTCCGAGAAGAGGGCAAGGGGCCCCCGCAGGG...GTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGGGGCCCAGAGGGAACGGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SNSSTRPALWLVWGPEGTGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...CGTTCCCTCTGGGCCCCACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCGTCAGCCTGGGTTAGTGCCAGCTCGATGACCCGGTaGCTACGGATCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SPGLQWATSFLASAWVSASSMTR*LRIFSS
Trigger: GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCT...GGCACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGGAGGAGACGATGGCCTaGAGCTCCTCAGCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: NCCMKTRATFSGRILRVWEETMA*SSSARD
Trigger: GTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTC...CCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568210.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCCCGGCGGCCTCCTCCTaGGCCATGGCAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: TMWGCRMPLRISISVRRFPAASS*AMAAEA
Trigger: GGCTTCAGCTGCCATGGCCAAGGAGGAGGCCGCCGG...GAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AGTGGGTGGCCTAGAGGGCACTGGGTCAGACTGTCTCCAAGCCTCCCTCTCCCTTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: SGWPRGHWVRLSPSLPLPWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...AGGGAGAGGGAGGCTTGGAGACAGTCTGACCCAGTGCCCTCTAGGCCACCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CCTGGTCTTTCTTCACAGCCTGCACCACCAGGGCGGTTGCTCGCCCCAGACTCTTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: PGLSSQPAPPGRLLAPDSWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...AGAGTCTGGGGCGAGCAACCGCCCTGGTGGTGCAGGCTGTGAAGAAAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCGAGACAGGAGATTaGGGGACTCTGCTGCACACC +
Preference number: 5 (lower is better)
Translates to: HLLRQNPAGMDEARQVAPCETGD*GTLLHT
Trigger: GGTGTGCAGCAGAGTCCCCAAATCTCCTGTCTCGCA...GGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562161.5
CDS-3UTR CAA 90 bp ACCCCCATGGACCAGAGGTCCACGCGGGCGTCATACTGCCGCTGGCACACCATCTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: TPMDQRSTRASYCRWHTIFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...GATGGTGTGCCAGCGGCAGTATGACGCCCGCGTGGACCTCTGGTCCATGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563301.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: VHPRSLLARAAVGHFILGPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...GCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTGGCAGCTCGATGACCCGGTaGCTACGGATCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: VHPRSLLARAAVGHFILGSSMTR*LRIFSS
Trigger: GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCT...GCCAAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGGCTAGGAGGCGTGGCTaGTCCCGGGCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SCTMWGCRMPLRISISVRARRRG*SRAISL
Trigger: CAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC...CCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GATGGCCTTGAGCTCCTCAGCCCGGGACACGTACTGCCCCACCTTTGCCTTAATTCCGACAGTCCCTCTTaGTCCAGGGTGTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: DGLELLSPGHVLPHLCLNSDSPS*SRVSAS
Trigger: GGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGA...ATTAAGGCAAAGGTGGGGCAGTACGTGTCCCGGGCTGAGGAGCTCAAGGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTGAAAGGGGAAAGAGCTaGCCCAGGGCTCCACGGCGG +
Preference number: 5 (lower is better)
Translates to: TCFSSHGDMCCAKPKSASERGKS*PRAPRR
Trigger: CCGCCGTGGAGCCCTGGGCAAGCTCTTTCCCCTTTC...ACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CAA 90 bp CACGGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTTGGCCCAGAGAGGCCTaGCCTGAGGAAACTGTAGGC +
Preference number: 5 (lower is better)
Translates to: HGARASHPTGTCVVRNQSWPREA*PEETVG
Trigger: GCCTACAGTTTCCTCAGGCAAGGCCTCTCTGGGCCA...ACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS-3UTR CAA 90 bp TCTCCCTGTCCCAGGCTCAAACTCCAGCACAAGGCCCGCGCTGTGGCTAGTGTGTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SPCPRLKLQHKARAVASVFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...CACACTAGCCACAGCGCGGGCCTTGTGCTGGAGTTTGAGCCTGGGACAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ACTGTCCATCCAAGAAGCCTGCTCGCCAGGGCTGCAGTGGGCCACTTCATTCTTCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: TVHPRSLLARAAVGHFILPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...AAGAATGAAGTGGCCCACTGCAGCCCTGGCGAGCAGGCTTCTTGGATGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTTTTGAGGAGACGATGGCCTaGAGCTCCTCAGCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: CFSSHGDMCCAKPKSASFEETMA*SSSARD
Trigger: GTCCCGGGCTGAGGAGCTCAAGGCCATCGTCTCCTC...AAAACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTACTGCACACCAGGCTAGGAGGCGTGGCTaGTCCCGGGCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: WLHTLWLPLHECPSTAHQARRRG*SRAISL
Trigger: CAGAGAGATGGCCCGGGACAAGCCACGCCTCCTAGC...CTGGTGTGCAGTAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS-3UTR CAA 90 bp CACGGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTTCCGACAGTCCCTCTTaGTCCAGGGTGTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: HGARASHPTGTCVVRNQSSDSPS*SRVSAS
Trigger: GGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGA...ACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTCCGACAGTCCCTCTTaGTCCAGGGTGTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QPGLVPLCSRWLTSVQSFSDSPS*SRVSAS
Trigger: GGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGA...GAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCGAGATTCCCTCTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: DSDSPSLSRVSASQRDSLWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...GAGGGAATCTCGCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CTGCCCTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGATGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: LPSPPVYSTAIKPSVGCRWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...TCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAAGGGCAGGAACAAGGCTaGGGCTTCTTAAACCCCAAA +
Preference number: 5 (lower is better)
Translates to: WRQPGLVPLCSRWLTSVQGQEQG*GFLNPK
Trigger: TTTGGGGTTTAAGAAGCCCAAGCCTTGTTCCTGCCC...TTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CTTCTCAGGCAGAATCCTGCGGGTATGGATGAAGCGAGACAGGTCGCCCCCTGCTTCTCCACCGATGCCTaGTTCAGACTTTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LLRQNPAGMDEARQVAPCFSTDA*FRLFLA
Trigger: AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAA...GCAGGGGGCGACCTGTCTCGCTTCATCCATACCCGCAGGATTCTGCCTGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CAA 90 bp CTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGATGAACCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: LHEDTRHLLRQNPAGMDEPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...TTCATCCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AGCTACGAACAGATTCCGACAGTCCCTCTTTGTCCAGGGTGTCAGCTTCCCAGCCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: SYEQIPTVPLCPGCQLPSPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...GCTGGGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGAATCTGTTCGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CAGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGTCCGACAGTCCCTCTTaGTCCAGGGTGTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QLHNVGMSNALEDLNLRESDSPS*SRVSAS
Trigger: GGAAGCTGACACCCTGGACAAAGAGGGACTGTCGGA...CTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTGGGCCACTTCATTCTaGGCGTCAGCCTGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: CRMPLRISISVRRFSTDAWATSF*ASAWVS
Trigger: ACTAACCCAGGCTGACGCCAAGAATGAAGTGGCCCA...GGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GAGAAGCAGGGAAAAGAGGTCTCACCATACAGGATGACCCCCATGGACCAGAGGCCGTTCATGCAGGAATaGCAGGGCGCTAATTGCTGC +
Preference number: 5 (lower is better)
Translates to: EKQGKEVSPYRMTPMDQRPFMQE*QGANCC
Trigger: GCAGCAATTAGCGCCCTGCAATTCCTGCATGAACGG...CCTCTGGTCCATGGGGGTCATCCTGTATGGTGAGACCTCTTTTCCCTGCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563301.5
CDS TCA 90 bp TCCCTCATCTGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTaGACCTGCCAAGGAAAGATATGCCCTTGGGTGTGGGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: SLICSFKYSARAMRF*TCQGKICPWVWGRV
Trigger: CACTCTCCCCCACACCCAAGGGCATATCTTTCCTTGGCAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAGATGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568718.5
CDS GCA 90 bp TTCTTGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTaGGAGACAGGAGATTTGGGGACTCTGCTGCACACCAGCACCGGG +
Preference number: 5 (lower is better)
Translates to: FLATHFMATTSRVSF*ETGDLGTLLHTSTG
Trigger: CCCGGTGCTGGTGTGCAGCAGAGTCCCCAAATCTCCTGTCTCGCAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562161.5
CDS-3UTR CAA 90 bp GTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: VGMSNALEDLNLREEVLHGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...GTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CAA 90 bp GCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: ALEDLNLREEVLHRCLVQGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...CTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CAA 90 bp CTTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LYTQPPAGRTDSSCPRKHGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...ATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AATTGCTGCATGAAGACACGCGCCACCTTCTCAGGCAGAATCCTGCGGGTATGGGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: NCCMKTRATFSGRILRVWGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...CCATACCCGCAGGATTCTGCCTGAGAAGGTGGCGCGTGTCTTCATGCAGCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CAA 90 bp TTTACACTCAGCCTCCTGCAGGGAGGACAGACAGCTCTTGCCCAAGGAAGCATTCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: FTLSLLQGGQTALAQGSIPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...AATGCTTCCTTGGGCAAGAGCTGTCTGTCCTCCCTGCAGGAGGCTGAGTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCAAAGTCTGCCAGTCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: TCFSSHGDMCCAKPKSASPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...ACTGGCAGACTTTGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CTCCCCTCCAGTATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACAGCTCGATGACCCGGTaGCTACGGATCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPSSIQHSHQTICGVQSNSSMTR*LRIFSS
Trigger: GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCT...GTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTATACTGGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GAGCCACGGAGCACGTGCTTCTCATCCCACGGGGACATGTGTTGTGCGAAACCACGAGATTCCCTCATCTaGACCTGCTCCTTCAAGTAT +
Preference number: 5 (lower is better)
Translates to: EPRSTCFSSHGDMCCAKPRDSLI*TCSFKY
Trigger: ATACTTGAAGGAGCAGGTCAAGATGAGGGAATCTCG...TGGTTTCGCACAACACATGTCCCCGTGGGATGAGAAGCACGTGCTCCGTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566631.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CCCATGCTGTGGGCTGTGAAGGTATCAGCCCCATTGAAGAGATGGGGAGACCCAGAGGACAGACAGCTCTaGCCCAAGGAAGCATTTAAG +
Preference number: 5 (lower is better)
Translates to: PMLWAVKVSAPLKRWGDPEDRQL*PKEAFK
Trigger: CTTAAATGCTTCCTTGGGCAAGAGCTGTCTGTCCTC...TGGGTCTCCCCATCTCTTCAATGGGGCTGATACCTTCACAGCCCACAGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp TTCTTGGCGTCAGCCTGGGTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTGAGGACAGACAGCTCTaGCCCAAGGAAGCATTTAAG +
Preference number: 5 (lower is better)
Translates to: FLASAWVSAPLLQMAHICEDRQL*PKEAFK
Trigger: CTTAAATGCTTCCTTGGGCAAGAGCTGTCTGTCCTC...ACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAACCCAGGCTGACGCCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS TCA 90 bp AGCGAGATTCCCTCATCTGCTCCTTCAAGTATTCAGCTCGGGCCATaGGGTTCTGAACCTGCCAAGGAAAGATATGCCCTTGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: SEIPSSAPSSIQLGP*GSEPAKERYALGCG
Trigger: CCCACACCCAAGGGCATATCTTTCCTTGGCAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAGATGAGGGAATCTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568718.5
CDS-3UTR CAA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: IQHSHQTICGVQSNLREAGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp CTTGAGGATCTCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTAGCTCGATGACCCGGTaGCTACGGATCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LEDLNLREEVLHRCLVQTSSMTR*LRIFSS
Trigger: GGAAGAGAAGATCCGTAGCAACCGGGTCATCGAGCT...AGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGAGATCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ATACAGCACAGCCATCAAACCATCTGTGGGGTGCAGAGTAACCTGAGGGAGGCTGGGCAGGAACAAGGCTaGGGCTTCTTAAACCCCAAA +
Preference number: 5 (lower is better)
Translates to: IQHSHQTICGVQSNLREAGQEQG*GFLNPK
Trigger: TTTGGGGTTTAAGAAGCCCAAGCCTTGTTCCTGCCC...AGCCTCCCTCAGGTTACTCTGCACCCCACAGATGGTTTGATGGCTGTGCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000569437.5
ENST00000647587.1
CDS-3UTR CAA 90 bp AGCTGCACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGGGGCAGGAACAAGGCTaGGGCTTCTTAAACCCCAAA +
Preference number: 5 (lower is better)
Translates to: SCTMWGCRMPLRISISVRGQEQG*GFLNPK
Trigger: TTTGGGGTTTAAGAAGCCCAAGCCTTGTTCCTGCCC...CCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGTGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS CCA 90 bp TCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTACTGCACACCAGCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: SPPMPCSDFSWLHTL*LPLHECPTAHQHRA
Trigger: AGCCCGGTGCTGGTGTGCAGTAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565373.5
CDS CCA 90 bp TCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTCAGCACCGGGCTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SPPMPCSDFSWLHTL*LPLHECPSAPGFPA
Trigger: AGCTGGGAAGCCCGGTGCTGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565790.5
CDS-3UTR CAA 90 bp TCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SASFRWGFSKELSRMFCGGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...GCCACAGAACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000562161.5
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ACAATGTGGGGATGTCGAATGCCCTTGAGGATCTCAATCTCCGTGAGGAGGTTCGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: TMWGCRMPLRISISVRRFGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...GAACCTCCTCACGGAGATTGAGATCCTCAAGGGCATTCGACATCCCCACATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562161.5
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000568679.1
ENST00000647587.1
CDS-3UTR CAA 90 bp TCAATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: SISVRRFSTDALFRLFLAPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...AGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp ACTGTCCCACTGAAAGTCTTTCAGCTGCACAATGTGGGGATGTCGAATGCCCTTCCACGGGGACATGTGTaGTGCGAAACCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: TVPLKVFQLHNVGMSNALPRGHV*CETKVC
Trigger: GCAGACTTTGGTTTCGCACAACACATGTCCCCGTGG...AAGGGCATTCGACATCCCCACATTGTGCAGCTGAAAGACTTTCAGTGGGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000565373.5
ENST00000565790.5
ENST00000568210.5
ENST00000647587.1
CDS CCA 90 bp TCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTGGCGTAGGCCTTGTACACCG +
Preference number: 5 (lower is better)
Translates to: SPPMPCSDFSWLHTL*LPLHECPWRRPCTP
Trigger: CGGTGTACAAGGCCTACGCCAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564029.5
CDS-3UTR CAA 90 bp AACCAAAGTCTGCCAGTTTTAGGTGGGGCTTCTCCAAGGAGCTCAGTAGAATGTGGATGTCGAATGCCCTaGAGGATCTCAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: NQSLPVLGGASPRSSVECGCRMP*RISISV
Trigger: CACGGAGATTGAGATCCTCAAGGGCATTCGACATCC...ACATTCTACTGAGCTCCTTGGAGAAGCCCCACCTAAAACTGGCAGACTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000562161.5
ENST00000563301.5
ENST00000565373.5
ENST00000565790.5
ENST00000566631.5
ENST00000568210.5
ENST00000568273.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GTTAGTGCCCCTCTGCTCCAGATGGCTCACATCTGTCCAATCATTCTTCTAGGGCGAGATTCCCTCATCTaGACCTGCTCCTTCAAGTAT +
Preference number: 5 (lower is better)
Translates to: VSAPLLQMAHICPIILLGRDSLI*TCSFKY
Trigger: ATACTTGAAGGAGCAGGTCAAGATGAGGGAATCTCG...CCCTAGAAGAATGATTGGACAGATGTGAGCCATCTGGAGCAGAGGGGCACTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440863.7
ENST00000566631.5
ENST00000647587.1
CDS-3UTR CAA 90 bp GCCCCCTGCGCAAAACTCCATGATGAGGTAGATATTGTCACTGTCCCACTGAAAGAGGACAGACAGCTCTaGCCCAAGGAAGCATTTAAG +
Preference number: 5 (lower is better)
Translates to: APCAKLHDEVDIVTVPLKEDRQL*PKEAFK
Trigger: CTTAAATGCTTCCTTGGGCAAGAGCTGTCTGTCCTC...TTTCAGTGGGACAGTGACAATATCTACCTCATCATGGAGTTTTGCGCAGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647587.1
CDS CCA 90 bp TCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTCTTGGCGTAGGCCTTGTACA +
Preference number: 5 (lower is better)
Translates to: SPPMPCSDFSWLHTL*LPLHECPSWRRPCT
Trigger: TGTACAAGGCCTACGCCAAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000440863.7
ENST00000561725.5
ENST00000562395.5
ENST00000563301.5
ENST00000565881.5
ENST00000566479.5
ENST00000566631.5
ENST00000569437.5
ENST00000570276.5
CDS CCA 90 bp TCTCCACCGATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTCTGCGAGACAGGAGATTTGG +
Preference number: 5 (lower is better)
Translates to: SPPMPCSDFSWLHTL*LPLHECPSARQEIW
Trigger: CCAAATCTCCTGTCTCGCAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562161.5
ENST00000569813.5
CDS TCA 90 bp TTCTCCAAGGAGCTCAGTAGAATGTTCTGTGGCTTCAGATCCAGGTaGGAGATATTCCGTTCATGCAGGAATTGCAGGGCGCTAATTGCT +
Preference number: 5 (lower is better)
Translates to: FSKELSRMFCGFRSR*EIFRSCRNCRALIA
Trigger: AGCAATTAGCGCCCTGCAATTCCTGCATGAACGGAATATCTCTCACCTGGATCTGAAGCCACAGAACATTCTACTGAGCTCCTTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563301.5
ENST00000565881.5
CDS TCA 72 bp TGGGGACTCTGCCTTGAGGGGGCCAGGACCCTTGTCTaGCTGGAAAGGCTCTATCTGGTTCCCTCTGTTCCC +
Preference number: 6 (lower is better)
Translates to: WGLCLEGARTLV*LERLYLVPSVP
Trigger: GGGAACAGAGGGAACCAGATAGAGCCTTTCCAGTCAGACAAGGGTCCTGGCCCCCTCAAGGCAGAGTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569813.5
CDS CCA 72 bp CCACTTCACGAGTGTCCTTCTGCGAGACAGGAGATTTaGGGACTCTGCCTTGAGGGGGCCAGGACCCTTGTC +
Preference number: 6 (lower is better)
Translates to: PLHECPSARQEI*GLCLEGARTLV
Trigger: GACAAGGGTCCTGGCCCCCTCAAGGCAGAGTCCCCAAATCTCCTGTCTCGCAGAAGGACACTCGTGAAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569813.5
CDS TCA 72 bp CAGCCTCAGCCTGGTCTTCTCCAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCTGGAGTGCTCCCGGCA +
Preference number: 6 (lower is better)
Translates to: QPQPGLLQPSAS*SISLHSGVLPA
Trigger: TGCCGGGAGCACTCCAGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTGGAGAAGACCAGGCTGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565790.5
CDS GCA 72 bp ATGCTCTCCAGAACCCTCTGCCCCATCAGAACAACTTaGCTCCTGAGTCCCTTATCTGCTCCTTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: MLSRTLCPIRTT*LLSPLSAPSSR
Trigger: CCTGGAGGAAGGAGCAGATAAGGGACTCAGGAGGCAAGTTGTTCTGATGGGGCAGAGGGTTCTGGAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568718.5
CDS TCA 72 bp CAGCCTCAGCCTGGTCTTCTCCAACCCTCGGCTAGCTaGTCCATTTCTTTGCATTCTTGGCGTAGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: QPQPGLLQPSAS*SISLHSWRRPC
Trigger: ACAAGGCCTACGCCAAGAATGCAAAGAAATGGATCAGCTAGCCGAGGGTTGGAGAAGACCAGGCTGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568679.1
ENST00000647587.1
CDS TCA 72 bp TGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTaGACCTGCCAAGGAAAGATATGCCCTTGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: CSFKYSARAMRF*TCQGKICPWVW
Trigger: CCACACCCAAGGGCATATCTTTCCTTGGCAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568718.5
CDS CAA 90 bp ATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTaGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: ISVRRFSTDALFRLF*ATHFMATTSRVSLA
Trigger: CGCCAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564029.5
CDS TCA 72 bp CCCTCATCTGCTCCTTCAAGTATTCAGCTCGGGCCATaGGGTTCTGAACCTGCCAAGGAAAGATATGCCCTT +
Preference number: 6 (lower is better)
Translates to: PSSAPSSIQLGP*GSEPAKERYAL
Trigger: AAGGGCATATCTTTCCTTGGCAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAGATGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568718.5
CDS CAA 90 bp ATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTaGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: ISVRRFSTDALFRLF*ATHFMATTSRVSFC
Trigger: GCAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562161.5
ENST00000569813.5
CDS CAA 90 bp ATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTaGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTACTGC +
Preference number: 6 (lower is better)
Translates to: ISVRRFSTDALFRLF*ATHFMATTSRVSYC
Trigger: GCAGTAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565373.5
CDS CAA 90 bp ATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTaGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: ISVRRFSTDALFRLF*ATHFMATTSRVSFS
Trigger: GCTGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565790.5
CDS CCA 72 bp ATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTCAGCACCGGGC +
Preference number: 6 (lower is better)
Translates to: MPCSDFSWLHTL*LPLHECPSAPG
Trigger: GCCCGGTGCTGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565790.5
CDS CAA 90 bp ATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTaGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: ISVRRFSTDALFRLF*ATHFMATTSRVSFL
Trigger: CAAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000440863.7
ENST00000561725.5
ENST00000562395.5
ENST00000563301.5
ENST00000565881.5
ENST00000566479.5
ENST00000566631.5
ENST00000569437.5
ENST00000570276.5
CDS CAA 90 bp ATCTCCGTGAGGAGGTTCTCCACCGATGCCTTGTTCAGACTTTTCTaGGCTACACACTTTATGGCTACCACTTCACGAGTGTCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: ISVRRFSTDALFRLF*ATHFMATTSRVSFA
Trigger: TGCAAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCATCGGTGGAGAACCTCCTCACGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568667.5
CDS CCA 72 bp ATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTGGCGTAGGCCT +
Preference number: 6 (lower is better)
Translates to: MPCSDFSWLHTL*LPLHECPWRRP
Trigger: AGGCCTACGCCAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564029.5
CDS CCA 72 bp ATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTCTTGGCGTAGG +
Preference number: 6 (lower is better)
Translates to: MPCSDFSWLHTL*LPLHECPSWRR
Trigger: CCTACGCCAAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000440863.7
ENST00000561725.5
ENST00000562395.5
ENST00000563301.5
ENST00000565881.5
ENST00000566479.5
ENST00000566631.5
ENST00000569437.5
ENST00000570276.5
CDS CCA 72 bp ATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTCTGCGAGACAG +
Preference number: 6 (lower is better)
Translates to: MPCSDFSWLHTL*LPLHECPSARQ
Trigger: CTGTCTCGCAGAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562161.5
ENST00000569813.5
CDS CCA 72 bp ATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTTTGCACACCAGC +
Preference number: 6 (lower is better)
Translates to: MPCSDFSWLHTL*LPLHECPLHTS
Trigger: GCTGGTGTGCAAAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568667.5
CDS CCA 72 bp ATGCCTTGTTCAGACTTTTCTTGGCTACACACTTTATaGCTACCACTTCACGAGTGTCCTACTGCACACCAG +
Preference number: 6 (lower is better)
Translates to: MPCSDFSWLHTL*LPLHECPTAHQ
Trigger: CTGGTGTGCAGTAGGACACTCGTGAAGTGGTAGCCATAAAGTGTGTAGCCAAGAAAAGTCTGAACAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565373.5