Pregenerated sensors for UHRF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000147854Ensembl transcript IDs: ENST00000276893.10, ENST00000381373.3, ENST00000461236.1, ENST00000468435.6, ENST00000481049.5, ENST00000484159.5, ENST00000485617.6, ENST00000492853.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCAACACTTTGGAGGCACTaGGACAGTCATCATCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LQNLIGNHDVILAKIMPATLWRH*DSHHLK Trigger: TTTCAGATGATGACTGTCCAAGTGCCTCCAAAGTGT...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR TCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCCCCTTTGTCTCCCCCTaGGCTCTGGGCGCCGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSPFVSP*ALGAAP Trigger: GGGCGCGGCGCCCAGAGCTCAGGGGGAGACAAAGGG...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCAGCTGGAGCTCCCACATaGAGGTCACGGCGCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPAAGAPT*RSRRQA Trigger: GGCTTGGCGCCGTGACCTCCATGTGGGAGCTCCAGC...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR GCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCAGGAAGAGGCCATGTCTaGGCCGCGCAGAGTGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPAGRGHV*AAQSVY Trigger: GTAAACACTCTGCGCGGCGCAGACATGGCCTCTTCC...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR GCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCTTCTGGCCAAGATCATaGCGGCAAGCAGGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSFWPRS*RQAGQE Trigger: CTCCTGCCCTGCTTGCCGGCATGATCTTGGCCAGAA...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR GCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCCACAAGCCATTCCCCTaGCCCAGTCTCTTCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSHKPFP*PSLFGF Trigger: AAAGCCGAAGAGACTGGGGCAGGGGAATGGCTTGTG...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR CCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCCCTGTATCCACATCTTaGCGCCTAGAGAGGAACCGG | + |
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Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSPVSTS*RLERNR Trigger: CCGGTTCCTCTCTAGGCGCCAAGATGTGGATACAGG...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR TCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCGCTGATGTAGATGGCTaGTTGGAAGGTCCTACCCTC | + |
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Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSADVDG*LEGPTL Trigger: GAGGGTAGGACCTTCCAATCAGCCATCTACATCAGC...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR TCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCCTTTCCATCTGCAAATaGAAGGGGATGGGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSLSICK*KGMGSR Trigger: CCTGGAGCCCATCCCCTTTCATTTGCAGATGGAAAG...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR TCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCAAGCAGCAACACAGTCTaGATTAGACGTAGAGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPASSNTV*IRRRGY Trigger: GTACCCTCTACGTCTAATTCAGACTGTGTTGCTGCT...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR TCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCACCTGCTTCGCTCACCTaGACTCTAAATCTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPAPASLT*TLNLQV Trigger: AACTTGGAGATTTAGAGTTCAGGTGAGCGAAGCAGG...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR GCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCATGGAGCCATCAATGGTaGGAACCTGTATCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPAWSHQW*EPVSTS Trigger: AGATGTGGATACAGGTTCGCACCATTGATGGCTCCA...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR CCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCCAATGGTGCACGTCTTaGAGCCATCAATGGTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSQWCTS*SHQWCE Trigger: TTCGCACCATTGATGGCTCCAAGACGTGCACCATTG...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR CCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCTCTTGGAGCCATCAATaGTGCGAACCTGTATCCACA | + |
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Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSSWSHQ*CEPVST Trigger: TGTGGATACAGGTTCGCACCATTGATGGCTCCAAGA...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR CCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCCTTCCACCCGGTATCTaGACAGACTCCACAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSLPPGI*TDSTIF Trigger: GAATATTGTGGAGTCTGTCCAGATACCGGGTGGAAG...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR TCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCATGGACAGTCATCATCTaGAATTGGCCTTTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPAWTVII*NWPFCG Trigger: ACCACAAAAAGGCCAATTTCAGATGATGACTGTCCA...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR GCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCAAGGTCAAGTAGAGTCTaGAGAATCTCATTGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPARSSRV*RISLGI Trigger: GATTCCCAATGAGATTCTGCAGACTCTACTTGACCT...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCAATGCTTTGTACACTTTaGAGGCACTTGGACAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPAMLCTL*RHLDSH Trigger: ATGACTGTCCAAGTGCCTCCAAAGTGTACAAAGCAT...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR TCA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCTCTCATTGGGAATCATaGTGTAATTCTGGCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSSHWES*CNSGQD Trigger: ATCTTGGCCAGAATTACATCATGATTCCCAATGAGA...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR GCA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCAAATACCTCTTTTAAGTaGAAAACCACACCACATTAC | + |
|
Preference number: 4 (lower is better) Translates to: LQNLIGNHDVILAKIMPANTSFK*KTTPHY Trigger: GTAATGTGGTGTGGTTTTGCACTTAAAAGAGGTATT...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS CCA 90 bp | GCTCCGGACGCCCTCACTTCTGACCCCGCGCGGCGCACCTCCAGTTaGGGCTGGCAGGGACCCACTCCCCACCATTCGGCGGGACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: APDALTSDPARRTSS*GWQGPTPHHSAGLG Trigger: GCCCAGTCCCGCCGAATGGTGGGGAGTGGGTCCCTGCCAGCCCCAACTGGAGGTGCGCCGCGCGGGGTCAGAAGTGAGGGCGTCCGGAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481049.5 |
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| CDS TCA 90 bp | CAAATACAAACGGCGAGATATTTGCGCTCCGGACGCCCTCACTTCTaGCCCCGCGCGGCGCACCTCCAGTTGGGGCTGGCAGGGACCCAC | + |
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Preference number: 5 (lower is better) Translates to: QIQTARYLRSGRPHF*PRAAHLQLGLAGTH Trigger: GTGGGTCCCTGCCAGCCCCAACTGGAGGTGCGCCGCGCGGGGTCAGAAGTGAGGGCGTCCGGAGCGCAAATATCTCGCCGTTTGTATTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481049.5 |
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| CDS GCA 90 bp | CACAGTCAGGAAGCAGAGTTAGGGTTCTTATTCTTGAGAGCTCAATaGCCGAGTTTCCCCTGTTTGAGAGCCGAAGACGCGGAAGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: HSQEAELGFLFLRAQ*PSFPCLRAEDAEEP Trigger: CGGCTCTTCCGCGTCTTCGGCTCTCAAACAGGGGAAACTCGGGCATTGAGCTCTCAAGAATAAGAACCCTAACTCTGCTTCCTGACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461236.1 |
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| CDS-3UTR CAA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCGCCCGACTAGCCGACTaGAGGAGAGACGACCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSARLAD*RRDDRN Trigger: GTTCCGGTCGTCTCTCCTCAAGTCGGCTAGTCGGGC...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR CAA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCAGGAACCGGTCCCCTTaGTCTCCCCCTGAGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSRNRSP*SPPELW Trigger: CCAGAGCTCAGGGGGAGACAAAGGGGACCGGTTCCT...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS GCA 90 bp | CCTCCATTAATCTATCTGCCACTCAGCCAGTCAGGTGCCTCTGACTaGCCTGATAAAAGATGGCCAGGTTACTTTGCTGCCCTCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: PPLIYLPLSQSGASD*PDKRWPGYFAALFS Trigger: ACTGAAGAGGGCAGCAAAGTAACCTGGCCATCTTTTATCAGGGCAGTCAGAGGCACCTGACTGGCTGAGTGGCAGATAGATTAATGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484159.5 ENST00000485617.6 |
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| CDS CCA 90 bp | CTGCCACTCAGCCAGTCAGGTGCCTCTGACTGCCCTGATAAAAGATaGCCAGGTTACTTTGCTGCCCTCTTCAGTTTCTTAAAGTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LPLSQSGASDCPDKR*PGYFAALFSFLKFE Trigger: TTCAAACTTTAAGAAACTGAAGAGGGCAGCAAAGTAACCTGGCCATCTTTTATCAGGGCAGTCAGAGGCACCTGACTGGCTGAGTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484159.5 ENST00000485617.6 |
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| CDS-3UTR CAA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCACCTGTATCCACATCTaGGCGCCTAGAGAGGAACCG | + |
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Preference number: 5 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSTCIHI*APREEP Trigger: CGGTTCCTCTCTAGGCGCCAAGATGTGGATACAGGT...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS-3UTR CAA 90 bp | CTGCAGAATCTCATTGGGAATCATGATGTAATTCTGGCCAAGATCATGCCGGCATCAATGGTGCACGTCTaGGAGCCATCAATGGTGCGA | + |
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Preference number: 5 (lower is better) Translates to: LQNLIGNHDVILAKIMPASMVHV*EPSMVR Trigger: TCGCACCATTGATGGCTCCAAGACGTGCACCATTGA...TGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS TCA 90 bp | AATGATAAAGCTGGCAGTTTTTACGGGAAGCACAACAATGGGGAATaGTGGGAGATGAACTCAAACCATGCTCTGAAGTCAGTGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: NDKAGSFYGKHNNGE*WEMNSNHALKSVSG Trigger: CCCTGACACTGACTTCAGAGCATGGTTTGAGTTCATCTCCCATCATTCCCCATTGTTGTGCTTCCCGTAAAAACTGCCAGCTTTATCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS-3UTR CAA 90 bp | ATACTTCTTAAACTGATCAAAACCAGTCTTCCACCCGGTATCTGGACAGACTCCACACTTTGGAGGCACTaGGACAGTCATCATCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: ILLKLIKTSLPPGIWTDSTLWRH*DSHHLK Trigger: TTTCAGATGATGACTGTCCAAGTGCCTCCAAAGTGT...GGAGTCTGTCCAGATACCGGGTGGAAGACTGGTTTTGATCAGTTTAAGAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468435.6 |
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| CDS GCA 90 bp | GGTATACAGGCAGTGAAGGGATTAATGCAGCCATACCATCCACTATaGACACAAAATCAACGAAGTCTTTATGGGTTAACAGCTGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GIQAVKGLMQPYHPL*TQNQRSLYGLTAEH Trigger: ATGCTCAGCTGTTAACCCATAAAGACTTCGTTGATTTTGTGTGCATAGTGGATGGTATGGCTGCATTAATCCCTTCACTGCCTGTATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS GCA 90 bp | GCCTTTCACCTCAGTTTTCATGTTTGTAAGACATACAGGTACCTTTaGCCAAGCACTTTTACAATCACAAGGCGTATTCACAACTTAACG | + |
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Preference number: 5 (lower is better) Translates to: AFHLSFHVCKTYRYL*PSTFTITRRIHNLT Trigger: CGTTAAGTTGTGAATACGCCTTGTGATTGTAAAAGTGCTTGGGCAAAGGTACCTGTATGTCTTACAAACATGAAAACTGAGGTGAAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484159.5 |
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| CDS TCA 90 bp | AGAAGCAAGAAGGTGTCGAACTACCTCTTAGCAAAGAAGCAAAAATaGATTCAACCATACACTACTGGGCAAAGAGTATACTATGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: RSKKVSNYLLAKKQK*IQPYTTGQRVYYGS Trigger: TGACCCATAGTATACTCTTTGCCCAGTAGTGTATGGTTGAATTCATTTTTGCTTCTTTGCTAAGAGGTAGTTCGACACCTTCTTGCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484159.5 |
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| CDS CCA 90 bp | CACTGTATGTTTCAGGCCTCAATGACTATTACTCATCATAGCAGATaGGCTCACATGCTTCTGCTCACAGTTTCAAATATAACCTATCTA | + |
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Preference number: 5 (lower is better) Translates to: HCMFQASMTITHHSR*AHMLLLTVSNITYL Trigger: TAGATAGGTTATATTTGAAACTGTGAGCAGAAGCATGTGAGCCCATCTGCTATGATGAGTAATAGTCATTGAGGCCTGAAACATACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS CAA 72 bp | GAAGACACACACTCACCTGCCTGGGTGGTCAGACACTaGCCCATAGTTCAGCCCCTACACATGCAGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EDTHSPAWVVRH*PIVQPLHMQCG Trigger: CCCACACTGCATGTGTAGGGGCTGAACTATGGGCAAGTGTCTGACCACCCAGGCAGGTGAGTGTGTGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS CAA 90 bp | CTTGCATTAGAAGACACACACTCACCTGCCTGGGTGGTCAGACACTaGCCCATAGTTCAGCCCCTACACATGCAGTGTGGGCAGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LALEDTHSPAWVVRH*PIVQPLHMQCGQSQ Trigger: CTGGCTCTGCCCACACTGCATGTGTAGGGGCTGAACTATGGGCAAGTGTCTGACCACCCAGGCAGGTGAGTGTGTGTCTTCTAATGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS TCA 72 bp | GCGAGCCGTGTTCACGTCACTGCACTACAGCCTGGGTaGCAGAGCCAGACCCTTATATATTCCAAAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASRVHVTALQPG*QSQTLIYSKAR Trigger: CCTGGCTTTGGAATATATAAGGGTCTGGCTCTGTCACCCAGGCTGTAGTGCAGTGACGTGAACACGGCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381373.3 |
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| CDS CAA 72 bp | TTGGAGCCATCAATGGTGCGAACCTGTATCCACATCTaGGCGCCTAGAGAGGAACCGGTCCCCTTTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LEPSMVRTCIHI*APREEPVPFVS Trigger: GGAGACAAAGGGGACCGGTTCCTCTCTAGGCGCCAAGATGTGGATACAGGTTCGCACCATTGATGGCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000276893.10 ENST00000381373.3 ENST00000468435.6 |
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| CDS GCA 72 bp | ATCTATCTGCCACTCAGCCAGTCAGGTGCCTCTGACTaGCCTGATAAAAGATGGCCAGGTTACTTTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: IYLPLSQSGASD*PDKRWPGYFAA Trigger: GGCAGCAAAGTAACCTGGCCATCTTTTATCAGGGCAGTCAGAGGCACCTGACTGGCTGAGTGGCAGATAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484159.5 ENST00000485617.6 |
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| CDS GCA 72 bp | GAAGCAGAGTTAGGGTTCTTATTCTTGAGAGCTCAATaGCCGAGTTTCCCCTGTTTGAGAGCCGAAGACGCG | + |
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Preference number: 6 (lower is better) Translates to: EAELGFLFLRAQ*PSFPCLRAEDA Trigger: CGCGTCTTCGGCTCTCAAACAGGGGAAACTCGGGCATTGAGCTCTCAAGAATAAGAACCCTAACTCTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461236.1 |
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| CDS GCA 72 bp | CAGAAACAGACTTGCATTAGAAGACACACACTCACCTaGCTGGGTGGTCAGACACTTGCCCATAGTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: QKQTCIRRHTLT*LGGQTLAHSSA Trigger: GGCTGAACTATGGGCAAGTGTCTGACCACCCAGGCAGGTGAGTGTGTGTCTTCTAATGCAAGTCTGTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS CCA 72 bp | AGCCAGTCAGGTGCCTCTGACTGCCCTGATAAAAGATaGCCAGGTTACTTTGCTGCCCTCTTCAGTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SQSGASDCPDKR*PGYFAALFSFL Trigger: TAAGAAACTGAAGAGGGCAGCAAAGTAACCTGGCCATCTTTTATCAGGGCAGTCAGAGGCACCTGACTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484159.5 ENST00000485617.6 |
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| CDS CAA 90 bp | TCCATTTTCCAACACAGTCAGGAAGCAGAGTTAGGGTTCTTATTCTaGAGAGCTCAATGCCCGAGTTTCCCCTGTTTGAGAGCCGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: SIFQHSQEAELGFLF*RAQCPSFPCLRAED Trigger: GTCTTCGGCTCTCAAACAGGGGAAACTCGGGCATTGAGCTCTCAAGAATAAGAACCCTAACTCTGCTTCCTGACTGTGTTGGAAAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461236.1 |
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| CDS TCA 72 bp | GCTGGCAGTTTTTACGGGAAGCACAACAATGGGGAATaGTGGGAGATGAACTCAAACCATGCTCTGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: AGSFYGKHNNGE*WEMNSNHALKS Trigger: TGACTTCAGAGCATGGTTTGAGTTCATCTCCCATCATTCCCCATTGTTGTGCTTCCCGTAAAAACTGCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS TCA 72 bp | AAGCTCCTGTCTCAAGAATGTTTTCACCAGCAAATCTaGCCTGTCTCCTCTGCTGGTTCAGTAAAAATAATC | + |
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Preference number: 6 (lower is better) Translates to: KLLSQECFHQQI*PVSSAGSVKII Trigger: GATTATTTTTACTGAACCAGCAGAGGAGACAGGTCAGATTTGCTGGTGAAAACATTCTTGAGACAGGAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484159.5 |
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| CDS GCA 72 bp | GCAGTGAAGGGATTAATGCAGCCATACCATCCACTATaGACACAAAATCAACGAAGTCTTTATGGGTTAACA | + |
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Preference number: 6 (lower is better) Translates to: AVKGLMQPYHPL*TQNQRSLYGLT Trigger: TGTTAACCCATAAAGACTTCGTTGATTTTGTGTGCATAGTGGATGGTATGGCTGCATTAATCCCTTCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS GCA 72 bp | CTCAGTTTTCATGTTTGTAAGACATACAGGTACCTTTaGCCAAGCACTTTTACAATCACAAGGCGTATTCAC | + |
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Preference number: 6 (lower is better) Translates to: LSFHVCKTYRYL*PSTFTITRRIH Trigger: GTGAATACGCCTTGTGATTGTAAAAGTGCTTGGGCAAAGGTACCTGTATGTCTTACAAACATGAAAACTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484159.5 |
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| CDS CCA 72 bp | TTTCAGGCCTCAATGACTATTACTCATCATAGCAGATaGGCTCACATGCTTCTGCTCACAGTTTCAAATATA | + |
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Preference number: 6 (lower is better) Translates to: FQASMTITHHSR*AHMLLLTVSNI Trigger: TATATTTGAAACTGTGAGCAGAAGCATGTGAGCCCATCTGCTATGATGAGTAATAGTCATTGAGGCCTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492853.1 |
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| CDS CAA 90 bp | AGCATCCAAATGCCTGTGCTAATGACAATGAAGACTTCTGGCTGCTaGAGATCACTACATTTTACTGATAATGCATTAATGCATGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SIQMPVLMTMKTSGC*RSLHFTDNALMHGQ Trigger: TTGACCATGCATTAATGCATTATCAGTAAAATGTAGTGATCTCAAGCAGCCAGAAGTCTTCATTGTCATTAGCACAGGCATTTGGATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485617.6 |
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| CDS TCA 72 bp | AAGGTGTCGAACTACCTCTTAGCAAAGAAGCAAAAATaGATTCAACCATACACTACTGGGCAAAGAGTATAC | + |
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Preference number: 6 (lower is better) Translates to: KVSNYLLAKKQK*IQPYTTGQRVY Trigger: GTATACTCTTTGCCCAGTAGTGTATGGTTGAATTCATTTTTGCTTCTTTGCTAAGAGGTAGTTCGACACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484159.5 |
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| CDS GCA 72 bp | AGAATGTTTTCACCAGCAAATCTGACCTGTCTCCTCTaGTGGTTCAGTAAAAATAATCCTACTATCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RMFSPANLTCLL*WFSKNNPTIRN Trigger: GTTTCTGATAGTAGGATTATTTTTACTGAACCAGCAGAGGAGACAGGTCAGATTTGCTGGTGAAAACATTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484159.5 |
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| CDS CAA 72 bp | ATGCCTGTGCTAATGACAATGAAGACTTCTGGCTGCTaGAGATCACTACATTTTACTGATAATGCATTAATG | + |
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Preference number: 6 (lower is better) Translates to: MPVLMTMKTSGC*RSLHFTDNALM Trigger: CATTAATGCATTATCAGTAAAATGTAGTGATCTCAAGCAGCCAGAAGTCTTCATTGTCATTAGCACAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485617.6 |
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| CDS CAA 90 bp | CAAATTACTGAGTTTACTCTAAAAAGGAGTTTGTCACTTTTAGCTTaGACCAATGGAGTAGTAGACAAGCCACCTTATTCTCAATTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QITEFTLKRSLSLLA*TNGVVDKPPYSQFH Trigger: GTGAAATTGAGAATAAGGTGGCTTGTCTACTACTCCATTGGTCAAAGCTAAAAGTGACAAACTCCTTTTTAGAGTAAACTCAGTAATTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484159.5 |
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| CDS CCA 72 bp | TCTAAAAAGGAGTTTGTCACTTTTAGCTTTGACCAATaGAGTAGTAGACAAGCCACCTTATTCTCAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: SKKEFVTFSFDQ*SSRQATLFSIS Trigger: TGAAATTGAGAATAAGGTGGCTTGTCTACTACTCCATTGGTCAAAGCTAAAAGTGACAAACTCCTTTTTAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484159.5 |
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| CDS CCA 72 bp | TCAATGAGCTTATTAGATGTTAGAAGACCTTACTCTTaGGAGAACCTAGTTGTACCAAAATCTGTATTTAAG | + |
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Preference number: 6 (lower is better) Translates to: SMSLLDVRRPYS*ENLVVPKSVFK Trigger: CTTAAATACAGATTTTGGTACAACTAGGTTCTCCCAAGAGTAAGGTCTTCTAACATCTAATAAGCTCATTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485617.6 |
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