RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UHRF1BP1L (Homo sapiens)

Ensembl gene IDs: ENSG00000111647

Ensembl transcript IDs: ENST00000279907.12, ENST00000356828.7, ENST00000545232.6, ENST00000547428.1, ENST00000547504.1, ENST00000548045.5, ENST00000548712.5, ENST00000550544.5, ENST00000551973.5, ENST00000551980.1

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAACTTTGTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTaGAGTACTTCTTCATCCAACTCCAAATTCTTCAGTTCACCTTCT +
Preference number: 1 (lower is better)
Translates to: KTLLIASHVGKSNIF*STSSSNSKFFSSPS
Trigger: AGAAGGTGAACTGAAGAATTTGGAGTTGGATGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAACAAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547428.1
3UTR-3UTR TCA 90 bp GGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATTACAAGACAATGCTTaGGTTTCAACTGTGCCATTT +
Preference number: 2 (lower is better)
Translates to: GAWLEYYDYAITDNGRGELQDNA*VSTVPF
Trigger: AAATGGCACAGTTGAAACTCAAGCATTGTCTTGTAA...TTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
3UTR-3UTR GCA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATCTTGAGTTTCAACTGTaGCATTTTACTCCCTATGAG +
Preference number: 2 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNLEFQL*HFTPYE
Trigger: CTCATAGGGAGTAAAATGGCACAGTTGAAACTCAAG...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356828.7
3UTR-3UTR CAA 90 bp TATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTTTTACAAGACAATGCTaGAGTTTCAACTGTGCCATT +
Preference number: 3 (lower is better)
Translates to: YAITDNGRGEYRGKGEQCFTRQC*SFNCAI
Trigger: AATGGCACAGTTGAAACTCAAGCATTGTCTTGTAAA...ACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356828.7
3UTR-3UTR CAA 90 bp GTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCATCTCAGGAGATAAATTTTaGGTAAATCTGAGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: VDSKPCWQIQHILEYFFISGDKF*VNLRAG
Trigger: TCCTGCCCTCAGATTTACCAAAAATTTATCTCCTGA...GATGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR TCA 90 bp TGCCATTTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGCCGGCGGAGAGGCGCTaGTCGCTCACGACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: CHFTPYEMQSRCLPSSILPAERR*SLTTGR
Trigger: TCTCCCGGTCGTGAGCGATCAGCGCCTCTCCGCCGG...CAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAAATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp GTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCATCCCGGCGGAGAGGCGCTaGTCGCTCACGACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: VDSKPCWQIQHILEYFFIPAERR*SLTTGR
Trigger: TCTCCCGGTCGTGAGCGATCAGCGCCTCTCCGCCGG...GATGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR GCA 90 bp TATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTGCGGTCTCGTCCTGTTaGTCACTGCCTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YAITDNGRGEYRGKGEQCAVSSC*SLPPLF
Trigger: GAAGAGAGGAGGCAGTGAGCAACAGGACGAGACCGC...ACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCCGGCGGAGAGGCGCTaGTCGCTCACGACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFPAERR*SLTTGR
Trigger: TCTCCCGGTCGTGAGCGATCAGCGCCTCTCCGCCGG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR TCA 90 bp TATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAGCAGTTGCAATTGGTaGTGGGCCATTAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YAITDNGRGEYRGKGEQCSSCNW*WAIRAS
Trigger: AGAAGCCCTAATGGCCCATCACCAATTGCAACTGCT...ACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp TGCCATTTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGCGTCCTGTTGCTCACTaGCTCCTCTCTTCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CHFTPYEMQSRCLPSSILRPVAH*LLSSWP
Trigger: CGGCCACGAAGAGAGGAGGCAGTGAGCAACAGGACG...CAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCCATGGTACCGAGGCTaGAGACGCCGCGGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQPWYRG*RRRGLV
Trigger: GACGAGACCGCGGCGTCTCCAGCCTCGGTACCATGG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR TCA 90 bp TACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGAGACAATGGCCGTGGTaGATACAGGGGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: YYDYAITDNGRGEYRGKGRQWPW*IQGQRG
Trigger: TCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCT...CCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCGTCCTGTTGCTCACTaGCTCCTCTCTTCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQRPVAH*LLSSWP
Trigger: CGGCCACGAAGAGAGGAGGCAGTGAGCAACAGGACG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp TTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGAGTTTTTGCCTCCTCTCTTCGTaGCCGTCTCCTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FTPYEMQSRCLPSSILSFCLLSS*PSPLCP
Trigger: GGGACAGAGAGGAGACGGCCACGAAGAGAGGAGGCA...AAAACTCAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp TTTGTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCTGCCTCCTCTCTTCGTaGCCGTCTCCTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FVDSKPCWQIQHILEYFFCLLSS*PSPLCP
Trigger: GGGACAGAGAGGAGACGGCCACGAAGAGAGGAGGCA...GAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR TCA 90 bp ATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAATACAGTGGAGAAAATACATCAGGAGCATTTaGAGTTTGCGTTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: MAVVNTGAKGSSVIQWRKYIRSI*SLRCLH
Trigger: GTGAAGACAACGCAAACTTCAAATGCTCCTGATGTA...TTTTCTCCACTGTATTACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp ATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAATACAGTGGAGAAAAGGTGAACCTACATTATaGTCCTTCACAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: MAVVNTGAKGSSVIQWRKGEPTL*SFTACL
Trigger: TAAACAGGCTGTGAAGGATCATAATGTAGGTTCACC...TTTTCTCCACTGTATTACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp TATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTACTTTGGGTGGCATCTaGCTCTATTCTTATCATCTG +
Preference number: 4 (lower is better)
Translates to: YAITDNGRGEYRGKGEQCTLGGI*LYSYHL
Trigger: CAGATGATAAGAATAGAGGCAGATGCCACCCAAAGT...ACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp ATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATGGCCGTCACTTGCTGGGCAGATaGGACTACTGTAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: IMGAWLEYYDYAITDNGRHLLGR*DYCRAL
Trigger: CAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTG...ACGGCCATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp AATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAATACAGTGGAGAAAAAAAGAGAGTTGCATTaGCCCTCCAGTAATACGTCT +
Preference number: 4 (lower is better)
Translates to: NGRGEYRGKGEQCNTVEKKRELH*PSSNTS
Trigger: AGACGTATTACTGGAGGGGCAATGCAACTCTCTTTT...TTTCTCCACTGTATTACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp TATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTTATTGCAGCAAATCATaGTTTTGGGGGAAGAACGAC +
Preference number: 4 (lower is better)
Translates to: YAITDNGRGEYRGKGEQCYCSKS*FWGKND
Trigger: GTCGTTCTTCCCCCAAAAGCATGATTTGCTGCAATA...ACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTACCCCTGGGCTTGTCTaGGTGGCTTGCGTGACACTG +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPTPGLV*VACVTL
Trigger: CAGTGTCACGCAAGCCACTCAGACAAGCCCAGGGGT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGGGTACTTAGATTTATCTTGTCAGGAGATAAATTTTTGGTAAATCTGAGGGCACGTCCTGTTGCTCACTaGCTCCTCTCTTCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RVLRFILSGDKFLVNLRARPVAH*LLSSWP
Trigger: CGGCCACGAAGAGAGGAGGCAGTGAGCAACAGGACG...TGCCCTCAGATTTACCAAAAATTTATCTCCTGACAAGATAAATCTAAGTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR GCA 90 bp TGCCATTTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACT +
Preference number: 4 (lower is better)
Translates to: CHFTPYEMQSRCLPSSILCVVFT*WADATT
Trigger: AGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCA...CAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp TATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTTGTGTAAAAGAGAGTTaGATTGCCCCTCCAGTAATA +
Preference number: 4 (lower is better)
Translates to: YAITDNGRGEYRGKGEQCCVKES*IAPPVI
Trigger: TATTACTGGAGGGGCAATGCAACTCTCTTTTACACA...ACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp GGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATGGCCGTGGTGAAATACTGAAGGTGTTCTaGATGTCCCTTTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GAWLEYYDYAITDNGRGEILKVF*MSLSEG
Trigger: ACCCTCTGAAAGGGACATGCAGAACACCTTCAGTAT...TTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp ATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAATACAGTGGAGAAAATTGAGTTTTCTCATCTaGTTAGGAAGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: MAVVNTGAKGSSVIQWRKLSFLI*LGRQLE
Trigger: TTCCAACTGCCTTCCTAAGCAGATGAGAAAACTCAA...TTTTCTCCACTGTATTACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCCGCGGGCGCCATCTTaGCTGCAGCATCACCTAAGA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFPRAPS*LQHHLR
Trigger: TCTTAGGTGATGCTGCAGCCAAGATGGCGCCCGCGG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTGCCTCCTCTCTTCGTaGCCGTCTCCTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFCLLSS*PSPLCP
Trigger: GGGACAGAGAGGAGACGGCCACGAAGAGAGGAGGCA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp TATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTGATAGCAAGCCATGTTaGCAAATCCAACATATTCTG +
Preference number: 4 (lower is better)
Translates to: YAITDNGRGEYRGKGEQCDSKPC*QIQHIL
Trigger: CAGAATATGTTGGATTTGCCAACATGGCTTGCTATC...ACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp GTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCATCGCCAGCAGGGAACGCTaGAGAGGTGCTTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: VDSKPCWQIQHILEYFFIASRER*RGASRF
Trigger: AAATCTTGAAGCACCTCTCCAGCGTTCCCTGCTGGC...GATGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR TCA 90 bp GGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATGGGGATTTAGGAGGTaGACCTACATTATGATCCTT +
Preference number: 4 (lower is better)
Translates to: GAWLEYYDYAITDNGRGEWGFRR*TYIMIL
Trigger: AAGGATCATAATGTAGGTTCACCTCCTAAATCCCCA...TTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp TTGTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCAGGTCCCTATTCCTGGTaGAAGCAAGCAGTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LLIASHVGKSNIFWSTSSGPYSW*KQAVSC
Trigger: GCAACTGACTGCTTGCTTTCACCAGGAATAGGGACC...TGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGCGGTCTCGTCCTGTTaGTCACTGCCTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPAVSSC*SLPPLF
Trigger: GAAGAGAGGAGGCAGTGAGCAACAGGACGAGACCGC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR GCA 90 bp TACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGGAGCATTTGAAGTTTaGGTTGTCTTCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: YYDYAITDNGRGEYRGKGGAFEV*VVFTCW
Trigger: CCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCC...CCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp ATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATGGCCGTGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTA +
Preference number: 4 (lower is better)
Translates to: IMGAWLEYYDYAITDNGRVVFTC*ADATTV
Trigger: TACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAAC...ACGGCCATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp ATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAATACAGTGGAGAAAAACAATTATGGGGGCATaGCTGGAATACTATGATTAT +
Preference number: 4 (lower is better)
Translates to: MAVVNTGAKGSSVIQWRKTIMGA*LEYYDY
Trigger: ATAATCATAGTATTCCAGCCATGCCCCCATAATTGT...TTTTCTCCACTGTATTACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTCTGAGTGGCTTGCGTaGCACTGCGTTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQSEWLA*HCVVSS
Trigger: TGAAGAAACAACGCAGTGTCACGCAAGCCACTCAGA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCTCAGGAAAGTTAGCTaGCTGAGAAGGCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLRKVS*LRRPRN
Trigger: GTTCCTTGGCCTTCTCAGTCAGCTAACTTTCCTGAG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQCVVFT*WADATT
Trigger: AGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAGGAGCCAGGTTGGGTaGGCAACGTTCCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFRSQVG*ATFLRL
Trigger: AAGCCTAAGGAACGTTGCCCACCCAACCTGGCTCCT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTAGGAGCCAGGTTGGGTaGGCAACGTTCCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPRSQVG*ATFLRL
Trigger: AAGCCTAAGGAACGTTGCCCACCCAACCTGGCTCCT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp TACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGCTGAGAAAGTTCAAATaGTGCATTGAAGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: YYDYAITDNGRGEYRGKGLRKFK*CIEGFC
Trigger: GCAAAAGCCTTCAATGCATCATTTGAACTTTCTCAG...CCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCTGCGGCTCTTTTTGTaGCTCTGCATATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLRLFL*LCISCW
Trigger: CCAACAAGATATGCAGAGTCACAAAAAGAGCCGCAG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCAGGTTTTCAGAGAGTaGAGCTGCTTCTGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQQVFRE*SCFWKQ
Trigger: TTGCTTCCAGAAGCAGCTTCACTCTCTGAAAACCTG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTTCCTGAGCACCCTCTaGATTTGTACTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQFLSTL*ICTDGI
Trigger: GATGCCATCAGTACAAATTCAGAGGGTGCTCAGGAA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGGAAAGTTAGCTGACTaGGAAGGCCAAGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPGKLAD*EGQGTP
Trigger: AGGGGTTCCTTGGCCTTCTCAGTCAGCTAACTTTCC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGGAAAGTTAGCTGACTaGGAAGGCCAAGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFGKLAD*EGQGTP
Trigger: AGGGGTTCCTTGGCCTTCTCAGTCAGCTAACTTTCC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGCATCTTTTTCCAAGTaGGCCTCTGCAAGAGCCATT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQASFSK*ASARAI
Trigger: AATGGCTCTTGCAGAGGCTCACTTGGAAAAAGATGC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp ATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATGGCCGTTCCATGTTCCCAGTGTaGATTTACACTATAGATCCG +
Preference number: 4 (lower is better)
Translates to: IMGAWLEYYDYAITDNGRSMFPV*IYTIDP
Trigger: CGGATCTATAGTGTAAATGCACACTGGGAACATGGA...ACGGCCATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCACTTGCTGGGCAGATaGGACTACTGTAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFHLLGR*DYCRAL
Trigger: CAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCACTTGCTGGGCAGATaGGACTACTGTAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPHLLGR*DYCRAL
Trigger: GAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545232.6
CDS-3UTR CCA 90 bp TGCCATTTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGAACCTCTCCTCTCTGTaGATCCTGAATACGAGTAAA +
Preference number: 4 (lower is better)
Translates to: CHFTPYEMQSRCLPSSILNLSSL*ILNTSK
Trigger: TTTACTCGTATTCAGGATCCACAGAGAGGAGAGGTT...CAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp TACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGACCATAGCTTTCAACTaGGAATCAGTCAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: YYDYAITDNGRGEYRGKGTIAFN*ESVKTH
Trigger: ATGGGTTTTGACTGATTCCCAGTTGAAAGCTATGGT...CCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTA +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQVVFTC*ADATTV
Trigger: TACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAAC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGATCATACTTTCCACTaGTCAGCAGCACTGAATCGC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQDHTFH*SAALNR
Trigger: GCGATTCAGTGCTGCTGACCAGTGGAAAGTATGATC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAGCAGTTGCAATTGGTaGTGGGCCATTAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFSSCNW*WAIRAS
Trigger: AGAAGCCCTAATGGCCCATCACCAATTGCAACTGCT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR TCA 90 bp TGCCATTTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGGTTCAAATGATGCATTaGAGGCTTTTGCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: CHFTPYEMQSRCLPSSILVQMMH*RLLLQF
Trigger: GAATTGGAGCAAAAGCCTTCAATGCATCATTTGAAC...CAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGATGAATATCTGCCTCTaGCGAGGAAGGGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQMNICL*RGRGKS
Trigger: AGATTTTCCCCTTCCTCGTCAGAGGCAGATATTCAT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGACTGGTCAGCAGCACTaGATCGCTTTTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQTGQQH*IAFDIF
Trigger: GAAAATGTCAAAAGCGATTCAGTGCTGCTGACCAGT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTCTGAGTGGCTTGCGTaGCACTGCGTTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFSEWLA*HCVVSS
Trigger: TGAAGAAACAACGCAGTGTCACGCAAGCCACTCAGA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCTCAGGAAAGTTAGCTaGCTGAGAAGGCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPLRKVS*LRRPRN
Trigger: GTTCCTTGGCCTTCTCAGTCAGCTAACTTTCCTGAG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFCVVFT*WADATT
Trigger: AGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGGAGCATTTGAAGTTTaGGTTGTCTTCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQGAFEV*VVFTCW
Trigger: CCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGATACTGAAGGTGTTCTaGATGTCCCTTTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQILKVF*MSLSEG
Trigger: ACCCTCTGAAAGGGACATGCAGAACACCTTCAGTAT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCGACAGTTTGGACAGTaGCTTGTATTTGTGGCAATC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQRQFGQ*LVFVAI
Trigger: GATTGCCACAAATACAAGGCACTGTCCAAACTGTCG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp TGCCATTTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGCTTGAGTTTCAACTGTaGCATTTTACTCCCTATGAG +
Preference number: 4 (lower is better)
Translates to: CHFTPYEMQSRCLPSSILLEFQL*HFTPYE
Trigger: CTCATAGGGAGTAAAATGGCACAGTTGAAACTCAAG...CAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp TTTGTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCGGAACGCTGGAGAGGTaGTTCAAGATTTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FVDSKPCWQIQHILEYFFGTLER*FKICFL
Trigger: CAAGAAACAAATCTTGAAGCACCTCTCCAGCGTTCC...GAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR CCA 90 bp ATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATGGCCGTTTATGGGGGCATGGCTaGAATACTATGATTATGCAA +
Preference number: 4 (lower is better)
Translates to: IMGAWLEYYDYAITDNGRLWGHG*NTMIMQ
Trigger: TTGCATAATCATAGTATTCCAGCCATGCCCCCATAA...ACGGCCATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCCTCTCTGTGGATCCTaGATACGAGTAAATCTCAAA +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQPLCGS*IRVNLK
Trigger: TTTGAGATTTACTCGTATTCAGGATCCACAGAGAGG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTACATCAGGAGCATTTaGAGTTTGCGTTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQYIRSI*SLRCLH
Trigger: GTGAAGACAACGCAAACTTCAAATGCTCCTGATGTA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGGTGAACCTACATTATaGTCCTTCACAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQGEPTL*SFTACL
Trigger: TAAACAGGCTGTGAAGGATCATAATGTAGGTTCACC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTGGGGATTTAGGAGGTaGACCTACATTATGATCCTT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQWGFRR*TYIMIL
Trigger: AAGGATCATAATGTAGGTTCACCTCCTAAATCCCCA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCTGCGGCTCTTTTTGTaGCTCTGCATATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFLRLFL*LCISCW
Trigger: CCAACAAGATATGCAGAGTCACAAAAAGAGCCGCAG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGTATTTAGAGATACCTaGTTACAAGTCTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQVFRDT*LQVCGS
Trigger: AGAGCCGCAGACTTGTAATCAGGTATCTCTAAATAC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGATGAAGAAGGCTTCTaGCCACCATTTGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPDEEGF*PPFVKG
Trigger: GCCTTTGACAAATGGTGGTCAGAAGCCTTCTTCATC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCCTGAGCACCCTCTaGATTTGTACTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPFLSTL*ICTDGI
Trigger: GATGCCATCAGTACAAATTCAGAGGGTGCTCAGGAA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGTCACCTGGTTCACTTaGAGACAGATTTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQVTWFT*RQISVS
Trigger: AGATACAGAAATCTGTCTTCAAGTGAACCAGGTGAC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGGTAATGCCGAAGGCTaGTATTGCCTAATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFGNAEG*YCLIGL
Trigger: CAGACCAATTAGGCAATATCAGCCTTCGGCATTACC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGCATCTTTTTCCAAGTaGGCCTCTGCAAGAGCCATT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFASFSK*ASARAI
Trigger: AATGGCTCTTGCAGAGGCTCACTTGGAAAAAGATGC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGACTTTGGGTGGCATCTaGCTCTATTCTTATCATCTG +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQTLGGI*LYSYHL
Trigger: CAGATGATAAGAATAGAGGCAGATGCCACCCAAAGT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTATTGCAGCAAATCATaGTTTTGGGGGAAGAACGAC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQYCSKS*FWGKND
Trigger: GTCGTTCTTCCCCCAAAAGCATGATTTGCTGCAATA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGAGCATTCACACTTTCTaGTGTGCCCCTGTAATTTGT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQSIHTF*CAPVIC
Trigger: ACAAATTACAGGGGCACAGCAGAAAGTGTGAATGCT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTTTGACTGCCACTCCTaGTATTCAACTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQFDCHS*YSTVIF
Trigger: GAAGATGACAGTTGAATAGCAGGAGTGGCAGTCAAA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGGGTACTTAGATTTATCTTGTCAGGAGATAAATTTTTGGTAAATCTGAGGGCAAAGCAAGCAGTCAGTTaGCAGGGTTTCTTAGACTCC +
Preference number: 4 (lower is better)
Translates to: RVLRFILSGDKFLVNLRAKQAVS*QGFLDS
Trigger: GGAGTCTAAGAAACCCTGGCAACTGACTGCTTGCTT...TGCCCTCAGATTTACCAAAAATTTATCTCCTGACAAGATAAATCTAAGTACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR CCA 90 bp AGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCATCCAACTCCAAAGATAGCAAGCCATGTTaGCAAATCCAACATATTCTG +
Preference number: 4 (lower is better)
Translates to: SHVGKSNIFWSTSSSNSKDSKPC*QIQHIL
Trigger: CAGAATATGTTGGATTTGCCAACATGGCTTGCTATC...TTTGGAGTTGGATGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR CCA 90 bp GAATACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAATTTCAGTTTTGTCCATaGGATCCTAATGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: EYYDYAITDNGRGEYRGKFQFCP*DPNGRF
Trigger: AAAGCGTCCATTAGGATCCCATGGACAAAACTGAAA...TTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFVVFTC*ADATTV
Trigger: TACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAAC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTACAGTTACAGGAGCTaGTTCAAGGGATACTGTACT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQYSYRS*FKGYCT
Trigger: AGTACAGTATCCCTTGAACCAGCTCCTGTAACTGTA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGATCATACTTTCCACTaGTCAGCAGCACTGAATCGC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPDHTFH*SAALNR
Trigger: GCGATTCAGTGCTGCTGACCAGTGGAAAGTATGATC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTATGAATATCTGCCTCTaGCGAGGAAGGGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPMNICL*RGRGKS
Trigger: AGATTTTCCCCTTCCTCGTCAGAGGCAGATATTCAT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTTAAGAGTATTTGCTTaGTCCACTGGATGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLRVFA*STGWSK
Trigger: TTTGCTCCATCCAGTGGATCAAGCAAATACTCTTAA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTACTGGTCAGCAGCACTaGATCGCTTTTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPTGQQH*IAFDIF
Trigger: GAAAATGTCAAAAGCGATTCAGTGCTGCTGACCAGT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGATTCAGCAATCTGTGTaGACACAAGAGGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQIQQSV*TQEVFL
Trigger: AAGGAAAACCTCTTGTGTTCACACAGATTGCTGAAT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp GAATACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAATTACAAGACAATGCTTaGGTTTCAACTGTGCCATTT +
Preference number: 4 (lower is better)
Translates to: EYYDYAITDNGRGEYRGKLQDNA*VSTVPF
Trigger: AAATGGCACAGTTGAAACTCAAGCATTGTCTTGTAA...TTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGGAGCATTTGAAGTTTaGGTTGTCTTCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFGAFEV*VVFTCW
Trigger: CCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTGTGTAAAAGAGAGTTaGATTGCCCCTCCAGTAATA +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQCVKES*IAPPVI
Trigger: TATTACTGGAGGGGCAATGCAACTCTCTTTTACACA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTATACTGAAGGTGTTCTaGATGTCCCTTTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPILKVF*MSLSEG
Trigger: ACCCTCTGAAAGGGACATGCAGAACACCTTCAGTAT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGACTCTGAATAGAAATTaGACGTGGCTGATCTTGATG +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQTLNRN*TWLILM
Trigger: CATCAAGATCAGCCACGTGCAATTTCTATTCAGAGT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGAAAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACTTACTCCCTATGAGATaGAGAGCAGATGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RKTIMGAWLEYYDYAITDLLPMR*RADVFL
Trigger: AAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAA...GTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp TGCCATTTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGAAATCCAACATATTCTaGAGTACTTCTTCATCCAAC +
Preference number: 4 (lower is better)
Translates to: CHFTPYEMQSRCLPSSILKSNIF*STSSSN
Trigger: GTTGGATGAAGAAGTACTCCAGAATATGTTGGATTT...CAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp AGAAAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACGCCATTAGGGCTTCTTaGTTCTTCACATGTACTCAT +
Preference number: 4 (lower is better)
Translates to: RKTIMGAWLEYYDYAITDAIRAS*FFTCTH
Trigger: ATGAGTACATGTGAAGAACCAAGAAGCCCTAATGGC...GTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGATAGAGGTTGGGAGATaGAATTGGAAAATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQIEVGR*NWKILS
Trigger: GGAAAGGATTTTCCAATTCCATCTCCCAACCTCTAT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTATTTGCTTGATCCACTaGATGGAGCAAAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFICLIH*MEQKSQ
Trigger: CTGGCTCTTTTGCTCCATCCAGTGGATCAAGCAAAT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCTGATATTGCCTAATTaGTCTGGTGTCACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPLILPN*SGVTWF
Trigger: GAACCAGGTGACACCAGACCAATTAGGCAATATCAG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp TTGTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCACCTCTGGTACTCATTTaGGTGATTATGCAATTCACA +
Preference number: 4 (lower is better)
Translates to: LLIASHVGKSNIFWSTSSPLVLI*VIMQFT
Trigger: TGTGAATTGCATAATCACCCAAATGAGTACCAGAGG...TGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR TCA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATCCTCTCTGTGGATCCTaGATACGAGTAAATCTCAAA +
Preference number: 4 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNPLCGS*IRVNLK
Trigger: TTTGAGATTTACTCGTATTCAGGATCCACAGAGAGG...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTACATCAGGAGCATTTaGAGTTTGCGTTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFYIRSI*SLRCLH
Trigger: GTGAAGACAACGCAAACTTCAAATGCTCCTGATGTA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGGTGAACCTACATTATaGTCCTTCACAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFGEPTL*SFTACL
Trigger: TAAACAGGCTGTGAAGGATCATAATGTAGGTTCACC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTGGGGATTTAGGAGGTaGACCTACATTATGATCCTT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPWGFRR*TYIMIL
Trigger: AAGGATCATAATGTAGGTTCACCTCCTAAATCCCCA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTTGGTATCTTGTTCATaGGCATGTCTCTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLVSCS*ACLWKI
Trigger: AATTTTCCAGAGACATGCTCATGAACAAGATACCAA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGTATTTAGAGATACCTaGTTACAAGTCTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPVFRDT*LQVCGS
Trigger: AGAGCCGCAGACTTGTAATCAGGTATCTCTAAATAC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGGGTCTCTTCTTTACTaGTATCCAGGTTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFGSLLY*YPGFQR
Trigger: TCTCTGAAAACCTGGATATCAGTAAAGAAGAGACCC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGTCACCTGGTTCACTTaGAGACAGATTTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFVTWFT*RQISVS
Trigger: AGATACAGAAATCTGTCTTCAAGTGAACCAGGTGAC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCTCTCTACCACAAGATaGTCAATATGTACAGTTACA +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLSTTR*SICTVT
Trigger: TGTAACTGTACATATTGATCATCTTGTGGTAGAGAG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTCCATGTTCCCAGTGTaGATTTACACTATAGATCCG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFSMFPV*IYTIDP
Trigger: CGGATCTATAGTGTAAATGCACACTGGGAACATGGA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAAAAGAGAGTTGCATTaGCCCTCCAGTAATACGTCT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFKRELH*PSSNTS
Trigger: AGACGTATTACTGGAGGGGCAATGCAACTCTCTTTT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTAAAAGAGAGTTGCATTaGCCCTCCAGTAATACGTCT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPKRELH*PSSNTS
Trigger: AGACGTATTACTGGAGGGGCAATGCAACTCTCTTTT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTATTGCAGCAAATCATaGTTTTGGGGGAAGAACGAC +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFYCSKS*FWGKND
Trigger: GTCGTTCTTCCCCCAAAAGCATGATTTGCTGCAATA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTTCCAAGTGAGCCTCTaGAAGAGCCATTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFFQVSL*KSHFSF
Trigger: AAAGCTAAAATGGCTCTTGCAGAGGCTCACTTGGAA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCCAAGTGAGCCTCTaGAAGAGCCATTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPFQVSL*KSHFSF
Trigger: AAAGCTAAAATGGCTCTTGCAGAGGCTCACTTGGAA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp TTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCATCCAAATCCAACATATTCTaGAGTACTTCTTCATCCAAC +
Preference number: 4 (lower is better)
Translates to: LIASHVGKSNIFWSTSSSKSNIF*STSSSN
Trigger: GTTGGATGAAGAAGTACTCCAGAATATGTTGGATTT...GGATGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGCCATTAGGGCTTCTTaGTTCTTCACATGTACTCAT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFAIRAS*FFTCTH
Trigger: ATGAGTACATGTGAAGAACCAAGAAGCCCTAATGGC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAACCTCTCCTCTCTGTaGATCCTGAATACGAGTAAA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFNLSSL*ILNTSK
Trigger: TTTACTCGTATTCAGGATCCACAGAGAGGAGAGGTT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGATGTGAACTTTGGGTaGCATCTGCCTCTATTCTTA +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPDVNFG*HLPLFL
Trigger: TAAGAATAGAGGCAGATGCCACCCAAAGTTCACATC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATGATGTGAACTTTGGGTaGCATCTGCCTCTATTCTTA +
Preference number: 4 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNDVNFG*HLPLFL
Trigger: TAAGAATAGAGGCAGATGCCACCCAAAGTTCACATC...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTCAAGATGTGAACTTTaGGTGGCATCTGCCTCTATT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPSRCEL*VASASI
Trigger: AATAGAGGCAGATGCCACCCAAAGTTCACATCTTGA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATTCAAGATGTGAACTTTaGGTGGCATCTGCCTCTATT +
Preference number: 4 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNSRCEL*VASASI
Trigger: AATAGAGGCAGATGCCACCCAAAGTTCACATCTTGA...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGCTGGCTATAGAGGTTaGGAGATGGAATTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFAGYRG*EMELEN
Trigger: ATTTTCCAATTCCATCTCCCAACCTCTATAGCCAGC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGCTGGCTATAGAGGTTaGGAGATGGAATTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPAGYRG*EMELEN
Trigger: ATTTTCCAATTCCATCTCCCAACCTCTATAGCCAGC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGTCTACAAAACTTATTaGCCGTCCTTTTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQVYKTY*PSFSTF
Trigger: AAAAGTGGAAAAGGACGGCCAATAAGTTTTGTAGAC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTATAATCAGGTACCACTaGGCTCACACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFIIRYH*AHTFRN
Trigger: GTTTCTGAAAGTGTGAGCCCAGTGGTACCTGATTAT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTATAATCAGGTACCACTaGGCTCACACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPIIRYH*AHTFRN
Trigger: GTTTCTGAAAGTGTGAGCCCAGTGGTACCTGATTAT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCTGATCGGAACCAACTaGACGATTACAAAGGTAATG +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPLIGTN*TITKVM
Trigger: CATTACCTTTGTAATCGTCCAGTTGGTTCCGATCAG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCTGATCGGAACCAACTaGACGATTACAAAGGTAATG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFLIGTN*TITKVM
Trigger: CATTACCTTTGTAATCGTCCAGTTGGTTCCGATCAG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTCTCAGGAGAGGATTTaGAATGAATTACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQSQERI*NELQLS
Trigger: AGAAAGCTGTAATTCATTCCAAATCCTCTCCTGAGA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCTGAAGTTTTCTATGTaGCACTGCAGAAATCCATTT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLKFSM*HCRNPF
Trigger: AAATGGATTTCTGCAGTGCCACATAGAAAACTTCAG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTACAGTTACAGGAGCTaGTTCAAGGGATACTGTACT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFYSYRS*FKGYCT
Trigger: AGTACAGTATCCCTTGAACCAGCTCCTGTAACTGTA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGTTCAAATGATGCATTaGAGGCTTTTGCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPVQMMH*RLLLQF
Trigger: GAATTGGAGCAAAAGCCTTCAATGCATCATTTGAAC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCTGAGAAAGTTCAAATaGTGCATTGAAGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPLRKFK*CIEGFC
Trigger: GCAAAAGCCTTCAATGCATCATTTGAACTTTCTCAG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTTAAGAGTATTTGCTTaGTCCACTGGATGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFLRVFA*STGWSK
Trigger: TTTGCTCCATCCAGTGGATCAAGCAAATACTCTTAA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTATTCAGCAATCTGTGTaGACACAAGAGGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPIQQSV*TQEVFL
Trigger: AAGGAAAACCTCTTGTGTTCACACAGATTGCTGAAT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTGTGTAAAAGAGAGTTaGATTGCCCCTCCAGTAATA +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPCVKES*IAPPVI
Trigger: TATTACTGGAGGGGCAATGCAACTCTCTTTTACACA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGTTCTTCCAATATCATaGTGTCAAGTGAAATGGTAT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQVLPIS*CQVKWY
Trigger: ATACCATTTCACTTGACAGCATGATATTGGAAGAAC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGATAGCAAGCCATGTTaGCAAATCCAACATATTCTG +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPDSKPC*QIQHIL
Trigger: CAGAATATGTTGGATTTGCCAACATGGCTTGCTATC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTTTCAGTTTTGTCCATaGGATCCTAATGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFFQFCP*DPNGRF
Trigger: AAAGCGTCCATTAGGATCCCATGGACAAAACTGAAA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTACCATAGCTTTCAACTaGGAATCAGTCAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFTIAFN*ESVKTH
Trigger: ATGGGTTTTGACTGATTCCCAGTTGAAAGCTATGGT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTCCGCTGTAGAGACCTaGTATATATTGAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPSAVET*YILKSA
Trigger: TGCAGATTTCAATATATACCAGGTCTCTACAGCGGA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATTCCGCTGTAGAGACCTaGTATATATTGAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNSAVET*YILKSA
Trigger: TGCAGATTTCAATATATACCAGGTCTCTACAGCGGA...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTATAGAGGTTGGGAGATaGAATTGGAAAATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPIEVGR*NWKILS
Trigger: GGAAAGGATTTTCCAATTCCATCTCCCAACCTCTAT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTAGAATGTCGACAGTTTaGACAGTGCCTTGTATTTGT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPRMSTV*TVPCIC
Trigger: ACAAATACAAGGCACTGTCCAAACTGTCGACATTCT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGAATTGTCACAAGATTTaGGGAAGCTGGTATATGTTT +
Preference number: 4 (lower is better)
Translates to: SLPLTGNIHIINITFLLQNCHKI*GSWYMF
Trigger: AAACATATACCAGCTTCCCCAAATCTTGTGACAATT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTCACTTCAGAAGGAATaGCAAACTTTAGCATTAAGC +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFSLQKE*QTLALS
Trigger: GCTTAATGCTAAAGTTTGTCATTCCTTCTGAAGTGA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR TCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAATGGAAAGAGGGAATaGGTCTACAAAACTTATTGG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFNGKRE*VYKTYW
Trigger: CCAATAAGTTTTGTAGACTCATTCCCTCTTTCCATT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGCACTCAAATTCATaGAATAACTCATTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPLHSNS*NNSLAH
Trigger: ATGGGCCAATGAGTTATTGCATGAATTTGAGTGCAA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATTTGCACTCAAATTCATaGAATAACTCATTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNLHSNS*NNSLAH
Trigger: ATGGGCCAATGAGTTATTGCATGAATTTGAGTGCAA...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTACTCGAACATCAACATaGTCGTCAGATTTTGAATTG +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFTRTST*SSDFEL
Trigger: CAATTCAAAATCTGACGAGCATGTTGATGTTCGAGT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTACTCGAACATCAACATaGTCGTCAGATTTTGAATTG +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPTRTST*SSDFEL
Trigger: CAATTCAAAATCTGACGAGCATGTTGATGTTCGAGT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCATTGGCATTACTGTTaGAACAGTTTCATCTTCCAA +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPHWHYC*NSFIFQ
Trigger: TTGGAAGATGAAACTGTTGCAACAGTAATGCCAATG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAATAGAAATTGCACGTaGCTGATCTTGATGACATTC +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFNRNCT*LILMTF
Trigger: GAATGTCATCAAGATCAGCCACGTGCAATTTCTATT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGTCTACAAAACTTATTaGCCGTCCTTTTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPVYKTY*PSFSTF
Trigger: AAAAGTGGAAAAGGACGGCCAATAAGTTTTGTAGAC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTCCTTTAAAGGGATATaGCTAAGGTCAACACTCATA +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPSFKGI*LRSTLI
Trigger: TATGAGTGTTGACCTTAGCCATATCCCTTTAAAGGA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTCCTTTAAAGGGATATaGCTAAGGTCAACACTCATA +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFSFKGI*LRSTLI
Trigger: TATGAGTGTTGACCTTAGCCATATCCCTTTAAAGGA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTGTACTGATGGCATCTaGAGAAGTTTCACCATAATT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPCTDGI*RSFTII
Trigger: AATTATGGTGAAACTTCTCCAGATGCCATCAGTACA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTCTCAGGAGAGGATTTaGAATGAATTACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPSQERI*NELQLS
Trigger: AGAAAGCTGTAATTCATTCCAAATCCTCTCCTGAGA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR GCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGTTCTTCCAATATCATaGTGTCAAGTGAAATGGTAT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFVLPIS*CQVKWY
Trigger: ATACCATTTCACTTGACAGCATGATATTGGAAGAAC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTAAATCCAACATATTCTaGAGTACTTCTTCATCCAAC +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPKSNIF*STSSSN
Trigger: GTTGGATGAAGAAGTACTCCAGAATATGTTGGATTT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CCA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTAACTTGTATCTTCATTaGCATTACTGTTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: NKYGEINSAICVNTRGFPNLYLH*HYCCNS
Trigger: ACTGTTGCAACAGTAATGCCAATGAAGATACAAGTT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CCA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAACTTGTATCTTCATTaGCATTACTGTTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFNLYLH*HYCCNS
Trigger: ACTGTTGCAACAGTAATGCCAATGAAGATACAAGTT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS TCA 90 bp GCCGTCTCCTCTCTGTCCCGGCTAGCCCGGCCGGCGGAGAGGCGCTaGTCGCTCACGACCGGGAGAGACCCAAGGCCCCGGCCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: AVSSLSRLARPAERR*SLTTGRDPRPRPRP
Trigger: TGGCCTTGGCCGGGGCCTTGGGTCTCTCCCGGTCGTGAGCGATCAGCGCCTCTCCGCCGGCCGGGCTAGCCGGGACAGAGAGGAGACGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000356828.7
ENST00000547428.1
CDS GCA 90 bp CCCGGCCATGGTACCGAGGCTGGAGACGCCGCGGTCTCGTCCTGTTaGTCACTGCCTCCTCTCTTCGTGGCCGTCTCCTCTCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PGHGTEAGDAAVSSC*SLPPLFVAVSSLSR
Trigger: CCGGGACAGAGAGGAGACGGCCACGAAGAGAGGAGGCAGTGAGCAACAGGACGAGACCGCGGCGTCTCCAGCCTCGGTACCATGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000356828.7
ENST00000547428.1
CDS TCA 90 bp ACTGAGAAGGCCAAGGAACCCCTGGGCTTGTCTGAGTGGCTTGCGTaGCACTGCGTTGTTTCTTCAGATCATACTTTCCACTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: TEKAKEPLGLSEWLA*HCVVSSDHTFHWSA
Trigger: TGCTGACCAGTGGAAAGTATGATCTGAAGAAACAACGCAGTGTCACGCAAGCCACTCAGACAAGCCCAGGGGTTCCTTGGCCTTCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000545232.6
ENST00000548712.5
CDS-3UTR CAA 90 bp TATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTGGGGGAAGAACGACATaGTTCCGCTGTAGAGACCTG +
Preference number: 5 (lower is better)
Translates to: YAITDNGRGEYRGKGEQCGGRTT*FRCRDL
Trigger: CAGGTCTCTACAGCGGAACAATGTCGTTCTTCCCCC...ACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS TCA 90 bp AGTCAGTTGCCAGGGTTTCTTAGACTCCTCTGGTACTCATTTGGGTaGTTATGCAATTCACAGCACACCAATCTCCACCACAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SQLPGFLRLLWYSFG*LCNSQHTNLHHSQQ
Trigger: CTGCTGGCTGTGGTGGAGATTGGTGTGCTGTGAATTGCATAATCACCCAAATGAGTACCAGAGGAGTCTAAGAAACCCTGGCAACTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS-3UTR CAA 90 bp ATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAATACAGTGGAGAAAATTTGTCCTGAAGCAGTaGCAATTGGTGATGGGCCAT +
Preference number: 5 (lower is better)
Translates to: MAVVNTGAKGSSVIQWRKFVLKQ*QLVMGH
Trigger: ATGGCCCATCACCAATTGCAACTGCTTCAGGACAAA...TTTTCTCCACTGTATTACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS CCA 90 bp TCATTTACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTAGAGCTCTGTGTAGGTTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SFTSGAFEVCVVFTC*ADATTVELCVGSGA
Trigger: GGCTCCTGAACCTACACAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGCCGCGGGCGCCATCTaGGCTGCAGCATCACCTAAG +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFAAGAI*AAASPK
Trigger: CTTAGGTGATGCTGCAGCCAAGATGGCGCCCGCGGC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CAA 90 bp ATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAATACAGTGGAGAAAACAGCAAATCATGCTTTaGGGGGAAGAACGACATTGT +
Preference number: 5 (lower is better)
Translates to: MAVVNTGAKGSSVIQWRKQQIML*GEERHC
Trigger: ACAATGTCGTTCTTCCCCCAAAAGCATGATTTGCTG...TTTTCTCCACTGTATTACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS TCA 90 bp TCTGATCGGAACCAACTGGACGATTACAAAGGTAATGCCGAAGGCTaGTATTGCCTAATTGGTCTGGTGTCACCTGGTTCACTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: SDRNQLDDYKGNAEG*YCLIGLVSPGSLED
Trigger: GTCTTCAAGTGAACCAGGTGACACCAGACCAATTAGGCAATATCAGCCTTCGGCATTACCTTTGTAATCGTCCAGTTGGTTCCGATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS GCA 90 bp GCATCATTTACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACTGTAGAGCTCTGTGTAGGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: ASFTSGAFEVCVVFT*WADATTVELCVGSG
Trigger: TCCTGAACCTACACAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS GCA 90 bp GCATCATTTACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACTGTAGAGCTCCTCACCTCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: ASFTSGAFEVCVVFT*WADATTVELLTSLK
Trigger: TTTAAGGGAGGTGAGGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551973.5
CDS CCA 90 bp TCATTTACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTAGAGCTCCTCACCTCCCTTAAATCT +
Preference number: 5 (lower is better)
Translates to: SFTSGAFEVCVVFTC*ADATTVELLTSLKS
Trigger: AGATTTAAGGGAGGTGAGGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551973.5
CDS-3UTR CAA 90 bp TACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGCATTTGAAGTTTGCGTaGTCTTCACTTGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: YYDYAITDNGRGEYRGKGHLKFA*SSLAGQ
Trigger: CTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATG...CCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGTAGTCCTTCTCTGTTaGTGTGTGCTGGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQVVLLC*CVLGRG
Trigger: GCCTCTCCCCAGCACACACAAACAGAGAAGGACTAC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp TTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGAGTTTTGTAGTCCTTCTCTGTTaGTGTGTGCTGGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: FTPYEMQSRCLPSSILSFVVLLC*CVLGRG
Trigger: GCCTCTCCCCAGCACACACAAACAGAGAAGGACTAC...AAAACTCAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGGGGGAAGAACGACATaGTTCCGCTGTAGAGACCTG +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQGGRTT*FRCRDL
Trigger: CAGGTCTCTACAGCGGAACAATGTCGTTCTTCCCCC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS TCA 90 bp TGGGGAGAGGCATGTGTTGGGGATTTAGGAGGTGAACCTACATTATaGTCCTTCACAGCCTGTTTAAGCATTTCAACGTTGCACTCAAAT +
Preference number: 5 (lower is better)
Translates to: WGEACVGDLGGEPTL*SFTACLSISTLHSN
Trigger: ATTTGAGTGCAACGTTGAAATGCTTAAACAGGCTGTGAAGGATCATAATGTAGGTTCACCTCCTAAATCCCCAACACATGCCTCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279907.12
ENST00000356828.7
ENST00000545232.6
ENST00000551973.5
CDS TCA 90 bp ACTGGGCTCACACTTTCAGAAACAGGAGACTTAAGAGTATTTGCTTaGTCCACTGGATGGAGCAAAAGAGCCAGTTCTGCACTTCTAAGT +
Preference number: 5 (lower is better)
Translates to: TGLTLSETGDLRVFA*STGWSKRASSALLS
Trigger: ACTTAGAAGTGCAGAACTGGCTCTTTTGCTCCATCCAGTGGATCAAGCAAATACTCTTAAGTCTCCTGTTTCTGAAAGTGTGAGCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS GCA 90 bp GCATCATTTACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACTGTAGAGCTCTCCCTTAAATCTACT +
Preference number: 5 (lower is better)
Translates to: ASFTSGAFEVCVVFT*WADATTVELSLKST
Trigger: AGTAGATTTAAGGGAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545232.6
ENST00000548045.5
CDS CCA 90 bp CACCAGGCCCACTTTCAAATCTCAGAGAAATCTCAGGAGAGGATTTaGAATGAATTACAGCTTTCTGATCGGAACCAACTGGACGATTAC +
Preference number: 5 (lower is better)
Translates to: HQAHFQISEKSQERI*NELQLSDRNQLDDY
Trigger: GTAATCGTCCAGTTGGTTCCGATCAGAAAGCTGTAATTCATTCCAAATCCTCTCCTGAGATTTCTCTGAGATTTGAAAGTGGGCCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS CCA 90 bp TCATTTACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTAGAGCTCTCCCTTAAATCTACTTCC +
Preference number: 5 (lower is better)
Translates to: SFTSGAFEVCVVFTC*ADATTVELSLKSTS
Trigger: GGAAGTAGATTTAAGGGAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545232.6
ENST00000548045.5
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCAGAGAGGAGCCAGGTaGGGTGGGCAACGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPQRGAR*GGQRSL
Trigger: TAAGGAACGTTGCCCACCCAACCTGGCTCCTCTCTG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCAGAGAGGAGCCAGGTaGGGTGGGCAACGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFQRGAR*GGQRSL
Trigger: TAAGGAACGTTGCCCACCCAACCTGGCTCCTCTCTG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGCTTGTCTGAGTGGCTaGCGTGACACTGCGTTGTTT +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQACLSG*RDTALF
Trigger: AAACAACGCAGTGTCACGCAAGCCACTCAGACAAGC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AATGGCCGTGGTGAATACAGGGGCAAAGGGGAGCAGTGTAATACAGTGGAGAAACTTCCTTCATCTATCTaGAGTTTTCTCATCTGCTTA +
Preference number: 5 (lower is better)
Translates to: NGRGEYRGKGEQCNTVEKLPSSI*SFLICL
Trigger: TAAGCAGATGAGAAAACTCAAGATAGATGAAGGAAG...TTTCTCCACTGTATTACACTGCTCCCCTTTGCCCCTGTATTCACCACGGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS TCA 90 bp TACCACAACGGACATCAGGTCATCATGATTTTCCTGAGCACCCTCTaGATTTGTACTGATGGCATCTGGAGAAGTTTCACCATAATTCTG +
Preference number: 5 (lower is better)
Translates to: YHNGHQVIMIFLSTL*ICTDGIWRSFTIIL
Trigger: CAGAATTATGGTGAAACTTCTCCAGATGCCATCAGTACAAATTCAGAGGGTGCTCAGGAAAATCATGATGACCTGATGTCCGTTGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000545232.6
ENST00000547504.1
CDS GCA 90 bp GCATCATTTACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACTGTAGAGCTCTTCAATCTATTAGTC +
Preference number: 5 (lower is better)
Translates to: ASFTSGAFEVCVVFT*WADATTVELFNLLV
Trigger: GACTAATAGATTGAAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550544.5
ENST00000551980.1
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGTAGTCCTTCTCTGTTaGTGTGTGCTGGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPVVLLC*CVLGRG
Trigger: GCCTCTCCCCAGCACACACAAACAGAGAAGGACTAC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGGGGGAAGAACGACATaGTTCCGCTGTAGAGACCTG +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFGGRTT*FRCRDL
Trigger: CAGGTCTCTACAGCGGAACAATGTCGTTCTTCCCCC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGCTTCTGACCACCATTaGTCAAAGGCTCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQASDHH*SKAQTL
Trigger: CAGAGTCTGAGCCTTTGACAAATGGTGGTCAGAAGC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp TGCCATTTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGTGCTTAGGAAGGCAGTaGGAAAATCCTTTCCATCTG +
Preference number: 5 (lower is better)
Translates to: CHFTPYEMQSRCLPSSILCLGRQ*ENPFHL
Trigger: CAGATGGAAAGGATTTTCCAACTGCCTTCCTAAGCA...CAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS GCA 90 bp GCGACTACTGTAGAGCTCTTCAATCTATTAGTCTTTAACTACGACTaGCATCTCTGTTACCAATCACAACCTAAGCTACCAAAATCTTCC +
Preference number: 5 (lower is better)
Translates to: ATTVELFNLLVFNYD*HLCYQSQPKLPKSS
Trigger: GGAAGATTTTGGTAGCTTAGGTTGTGATTGGTAACAGAGATGGCAGTCGTAGTTAAAGACTAATAGATTGAAGAGCTCTACAGTAGTCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550544.5
ENST00000551980.1
CDS CCA 90 bp TCATTTACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTAGAGCTCTTCAATCTATTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: SFTSGAFEVCVVFTC*ADATTVELFNLLVF
Trigger: AAAGACTAATAGATTGAAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550544.5
ENST00000551980.1
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCTGTGTAAAAGAGAGTaGCATTGCCCCTCCAGTAAT +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLCKRE*HCPSSN
Trigger: ATTACTGGAGGGGCAATGCAACTCTCTTTTACACAG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCAGCAAATCATGCTTTaGGGGGAAGAACGACATTGT +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQQQIML*GEERHC
Trigger: ACAATGTCGTTCTTCCCCCAAAAGCATGATTTGCTG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTGCACGTGGCTGATCTaGATGACATTCAGATTTCAC +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQCTWLI*MTFRFH
Trigger: GTGAAATCTGAATGTCATCAAGATCAGCCACGTGCA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGCTTCTGACCACCATTaGTCAAAGGCTCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPASDHH*SKAQTL
Trigger: CAGAGTCTGAGCCTTTGACAAATGGTGGTCAGAAGC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTGCCGAAGGCTGATATaGCCTAATTGGTCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFCRRLI*PNWSGV
Trigger: GACACCAGACCAATTAGGCAATATCAGCCTTCGGCA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTGCCGAAGGCTGATATaGCCTAATTGGTCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPCRRLI*PNWSGV
Trigger: GACACCAGACCAATTAGGCAATATCAGCCTTCGGCA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp TACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAAGGGTTTACAAGACAATGCTaGAGTTTCAACTGTGCCATT +
Preference number: 5 (lower is better)
Translates to: YYDYAITDNGRGEYRGKGFTRQC*SFNCAI
Trigger: AATGGCACAGTTGAAACTCAAGCATTGTCTTGTAAA...CCCTTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp AGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCATCCAACTCCAAATCCTCTGGTACTCATTaGGGTGATTATGCAATTCAC +
Preference number: 5 (lower is better)
Translates to: SHVGKSNIFWSTSSSNSKSSGTH*GDYAIH
Trigger: GTGAATTGCATAATCACCCAAATGAGTACCAGAGGA...TTTGGAGTTGGATGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS TCA 90 bp CCAGCCAGATCACTAGATTCACTTTGTGATGTATTTAGAGATACCTaGTTACAAGTCTGCGGCTCTTTTTGTGACTCTGCATATCTTGTT +
Preference number: 5 (lower is better)
Translates to: PARSLDSLCDVFRDT*LQVCGSFCDSAYLV
Trigger: AACAAGATATGCAGAGTCACAAAAAGAGCCGCAGACTTGTAATCAGGTATCTCTAAATACATCACAAAGTGAATCTAGTGATCTGGCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp GAATACTATGATTATGCAATAACAGACAATGGCCGTGGTGAATACAGGGGCAAATCAGGAGATAAATTTTaGGTAAATCTGGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: EYYDYAITDNGRGEYRGKSGDKF*VNLERC
Trigger: GCACCTCTCCAGATTTACCAAAAATTTATCTCCTGA...TTTGCCCCTGTATTCACCACGGCCATTGTCTGTTATTGCATAATCATAGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTGTCCTGAAGCAGTaGCAATTGGTGATGGGCCAT +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPFVLKQ*QLVMGH
Trigger: ATGGCCCATCACCAATTGCAACTGCTTCAGGACAAA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCATTTGAAGTTTGCGTaGTCTTCACTTGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFHLKFA*SSLAGQ
Trigger: CTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGACAGTGCCTTGTATTaGTGGCAATCATTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQDSALY*WQSFQN
Trigger: GTTCTGAAATGATTGCCACAAATACAAGGCACTGTC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGCTTAAGAGTATTTGCTaGATCCACTGGATGGAGCAA +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLKSIC*IHWMEQ
Trigger: TTGCTCCATCCAGTGGATCAAGCAAATACTCTTAAG...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS GCA 90 bp GGAATGACAAACTTTAGCATTAAGCCATCAACTCGAACATCAACATaGTCGTCAGATTTTGAATTGTCATTCAACTTGTACACAGCCATG +
Preference number: 5 (lower is better)
Translates to: GMTNFSIKPSTRTST*SSDFELSFNLYTAM
Trigger: CATGGCTGTGTACAAGTTGAATGACAATTCAAAATCTGACGAGCATGTTGATGTTCGAGTTGATGGCTTAATGCTAAAGTTTGTCATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS GCA 90 bp CTTCTTTATATGATGAAGAAGAGCATCTTTTTCCAAGTGAGCCTCTaGAAGAGCCATTTTAGCTTTAGCCAGTTCCTGTTTAAGAGATTC +
Preference number: 5 (lower is better)
Translates to: LLYMMKKSIFFQVSL*KSHFSFSQFLFKRF
Trigger: GAATCTCTTAAACAGGAACTGGCTAAAGCTAAAATGGCTCTTGCAGAGGCTCACTTGGAAAAAGATGCTCTTCTTCATCATATAAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTCAGGAGATAAATTTTaGGTAAATCTGGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQSGDKF*VNLERC
Trigger: GCACCTCTCCAGATTTACCAAAAATTTATCTCCTGA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTTACATCAGGAGCATTaGAAGTTTGCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQLHQEH*KFALSS
Trigger: TGAAGACAACGCAAACTTCAAATGCTCCTGATGTAA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATCTGTGTAAAAGAGAGTaGCATTGCCCCTCCAGTAAT +
Preference number: 5 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNLCKRE*HCPSSN
Trigger: ATTACTGGAGGGGCAATGCAACTCTCTTTTACACAG...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGGAGACCTGGTATATATaGAAATCTGCAAGTCTAACC +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQETWYI*KSASLT
Trigger: GGTTAGACTTGCAGATTTCAATATATACCAGGTCTC...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp TTTACTCCCTATGAGATGCAGAGCAGATGTCTTCCTTCATCTATCTTGAGTTTTGAGACCTGGTATATATaGAAATCTGCAAGTCTAACC +
Preference number: 5 (lower is better)
Translates to: FTPYEMQSRCLPSSILSFETWYI*KSASLT
Trigger: GGTTAGACTTGCAGATTTCAATATATACCAGGTCTC...AAAACTCAAGATAGATGAAGGAAGACATCTGCTCTGCATCTCATAGGGAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGAGTTTGGACAGTGCCTaGTATTTGTGGCAATCATTT +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQSLDSA*YLWQSF
Trigger: AAATGATTGCCACAAATACAAGGCACTGTCCAAACT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCAGAATGTCGACAGTTaGGACAGTGCCTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPQNVDS*DSALYL
Trigger: CAAATACAAGGCACTGTCCAAACTGTCGACATTCTG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCAGAATGTCGACAGTTaGGACAGTGCCTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFQNVDS*DSALYL
Trigger: CAAATACAAGGCACTGTCCAAACTGTCGACATTCTG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGTCATTGGCATTACTGTaGCAACAGTTTCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQSLALL*QQFHLP
Trigger: TGGAAGATGAAACTGTTGCAACAGTAATGCCAATGA...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp TTGTTGATAGCAAGCCATGTTGGCAAATCCAACATATTCTGGAGTACTTCTTCATCAGGAGATAAATTTTaGGTAAATCTGAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: LLIASHVGKSNIFWSTSSSGDKF*VNLRAG
Trigger: TCCTGCCCTCAGATTTACCAAAAATTTATCTCCTGA...TGAAGAAGTACTCCAGAATATGTTGGATTTGCCAACATGGCTTGCTATCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS TCA 90 bp CCAGTGTGCATTTACACTATAGATCCGAAGCTGAGAAAGTTCAAATaGTGCATTGAAGGCTTTTGCTCCAATTCTGATGACTATAGAATT +
Preference number: 5 (lower is better)
Translates to: PVCIYTIDPKLRKFK*CIEGFCSNSDDYRI
Trigger: AATTCTATAGTCATCAGAATTGGAGCAAAAGCCTTCAATGCATCATTTGAACTTTCTCAGCTTCGGATCTATAGTGTAAATGCACACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS TCA 90 bp TTACAAGTCTGCGGCTCTTTTTGTGACTCTGCATATCTTGTTGGTTaGCAAATCCAAATGGAAAGAGGGAATGAGTCTACAAAACTTATT +
Preference number: 5 (lower is better)
Translates to: LQVCGSFCDSAYLVG*QIQMERGNESTKLI
Trigger: AATAAGTTTTGTAGACTCATTCCCTCTTTCCATTTGGATTTGTCAACCAACAAGATATGCAGAGTCACAAAAAGAGCCGCAGACTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGACAGTGCCTTGTATTaGTGGCAATCATTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFDSALY*WQSFQN
Trigger: GTTCTGAAATGATTGCCACAAATACAAGGCACTGTC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCTTAAGAGTATTTGCTaGATCCACTGGATGGAGCAA +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFLKSIC*IHWMEQ
Trigger: TTGCTCCATCCAGTGGATCAAGCAAATACTCTTAAG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTGTCACCTGGTTCACTaGAAGACAGATTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFCHLVH*KTDFCI
Trigger: GATACAGAAATCTGTCTTCAAGTGAACCAGGTGACA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTGTCACCTGGTTCACTaGAAGACAGATTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPCHLVH*KTDFCI
Trigger: GATACAGAAATCTGTCTTCAAGTGAACCAGGTGACA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGCGTGACACTGCGTaGTTTCTTCAGATCATACTT +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPLRDTA*FLQIIL
Trigger: AAGTATGATCTGAAGAAACAACGCAGTGTCACGCAA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTTGCGTGACACTGCGTaGTTTCTTCAGATCATACTT +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFLRDTA*FLQIIL
Trigger: AAGTATGATCTGAAGAAACAACGCAGTGTCACGCAA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AGTCTTCCCCTAACTGGTAACATCCACATTATAAATATAACCTTCCTACTCCAGATTTTACACTATGTGTaGACTTCCCTAGATCACAAC +
Preference number: 5 (lower is better)
Translates to: SLPLTGNIHIINITFLLQILHYV*TSLDHN
Trigger: GTTGTGATCTAGGGAAGTCAACACATAGTGTAAAAT...CTGGAGTAGGAAGGTTATATTTATAATGTGGATGTTACCAGTTAGGGGAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS TCA 90 bp TATATCCCTCTTCAAATCTCTTCCATCTTCGTAGTTCCAAAGTCTTaGTTGAAAAATCTCTTGTTCAACTGTTCCCTAGTGAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: YIPLQISSIFVVPKS*LKNLLFNCSLVKSK
Trigger: CTTTGACTTCACTAGGGAACAGTTGAACAAGAGATTTTTCAATCAAGACTTTGGAACTACGAAGATGGAAGAGATTTGAAGAGGGATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548712.5
CDS CCA 90 bp GTTATTAATCGAACAGGAGCACACATAATTTCAAGATGTGAACTTTaGGTGGCATCTGCCTCTATTCTTATCATCTGCCAATTTATTTCT +
Preference number: 5 (lower is better)
Translates to: VINRTGAHIISRCEL*VASASILIICQFIS
Trigger: AGAAATAAATTGGCAGATGATAAGAATAGAGGCAGATGCCACCCAAAGTTCACATCTTGAAATTATGTGTGCTCCTGTTCGATTAATAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTACATCAGGAGCATTaGAAGTTTGCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPLHQEH*KFALSS
Trigger: TGAAGACAACGCAAACTTCAAATGCTCCTGATGTAA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATTTACATCAGGAGCATTaGAAGTTTGCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNLHQEH*KFALSS
Trigger: TGAAGACAACGCAAACTTCAAATGCTCCTGATGTAA...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAGTTTGGACAGTGCCTaGTATTTGTGGCAATCATTT +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFSLDSA*YLWQSF
Trigger: AAATGATTGCCACAAATACAAGGCACTGTCCAAACT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTATGCATTTTGGTATCTaGTTCATGAGCATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFMHFGI*FMSMSL
Trigger: CAGAGACATGCTCATGAACAAGATACCAAAATGCAT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTAGTCTACAAAACTTATaGGCCGTCCTTTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPSLQNL*AVLFHF
Trigger: AAAGTGGAAAAGGACGGCCAATAAGTTTTGTAGACT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAGTCTACAAAACTTATaGGCCGTCCTTTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFSLQNL*AVLFHF
Trigger: AAAGTGGAAAAGGACGGCCAATAAGTTTTGTAGACT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTACTCTGCATATCTTGTaGGTTGACAAATCCAAATGG +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFTLHIL*VDKSKW
Trigger: CCATTTGGATTTGTCAACCAACAAGATATGCAGAGT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGTGACTCTGCATATCTaGTTGGTTGACAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFVTLHI*LVDKSK
Trigger: TTTGGATTTGTCAACCAACAAGATATGCAGAGTCAC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGTGACTCTGCATATCTaGTTGGTTGACAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPVTLHI*LVDKSK
Trigger: TTTGGATTTGTCAACCAACAAGATATGCAGAGTCAC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCATAATTCTGTAGGTTaGCACCAGCATTCACACTTT +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFHNSVG*HQHSHF
Trigger: AAAGTGTGAATGCTGGTGCAAACCTACAGAATTATG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTCATAATTCTGTAGGTTaGCACCAGCATTCACACTTT +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPHNSVG*HQHSHF
Trigger: AAAGTGTGAATGCTGGTGCAAACCTACAGAATTATG...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTCATTGGCATTACTGTaGCAACAGTTTCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFSLALL*QQFHLP
Trigger: TGGAAGATGAAACTGTTGCAACAGTAATGCCAATGA...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTGCTATAATTTCAGTTTaGACTGCCACTCCTGCTATT +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPAIISV*TATPAI
Trigger: AATAGCAGGAGTGGCAGTCAAAACTGAAATTATAGC...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTGCTATAATTTCAGTTTaGACTGCCACTCCTGCTATT +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFAIISV*TATPAI
Trigger: AATAGCAGGAGTGGCAGTCAAAACTGAAATTATAGC...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTTGTTGCTATGACATaGCAGTCCTTTAACCTTCTT +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPFVAMT*QSFNLL
Trigger: AAGAAGGTTAAAGGACTGCAATGTCATAGCAACAAA...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CAA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATTTTGTTGCTATGACATaGCAGTCCTTTAACCTTCTT +
Preference number: 5 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNFVAMT*QSFNLL
Trigger: AAGAAGGTTAAAGGACTGCAATGTCATAGCAACAAA...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAAGAGACTTTGCATATaGTACCATAGCTTTCAACTG +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFKRLCI*YHSFQL
Trigger: CAGTTGAAAGCTATGGTACAATATGCAAAGTCTCTT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279907.12
CDS-3UTR CAA 90 bp AAAACAATTATGGGGGCATGGCTGGAATACTATGATTATGCAATAACAGACAATAAGAGACTTTGCATATaGTACCATAGCTTTCAACTG +
Preference number: 5 (lower is better)
Translates to: KTIMGAWLEYYDYAITDNKRLCI*YHSFQL
Trigger: CAGTTGAAAGCTATGGTACAATATGCAAAGTCTCTT...ATTGTCTGTTATTGCATAATCATAGTATTCCAGCCATGCCCCCATAATTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356828.7
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTCATGCTCGTCAGATTTaGAATTGTCATTCAACTTGT +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFHARQI*NCHSTC
Trigger: ACAAGTTGAATGACAATTCAAAATCTGACGAGCATG...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp CAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTTTAAACTTGTATCTTCATaGGCATTACTGTTGCAACAG +
Preference number: 5 (lower is better)
Translates to: QIWRNQFSNLCEHKRFSFKLVSS*ALLLQQ
Trigger: CTGTTGCAACAGTAATGCCAATGAAGATACAAGTTT...AAAGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS-3UTR CAA 90 bp AACAAATATGGAGAAATCAATTCAGCAATCTGTGTGAACACAAGAGGTTTTCCTATTTTACACTATGTGTaGACTTCCCTAGATCACAAC +
Preference number: 5 (lower is better)
Translates to: NKYGEINSAICVNTRGFPILHYV*TSLDHN
Trigger: GTTGTGATCTAGGGAAGTCAACACATAGTGTAAAAT...AGGAAAACCTCTTGTGTTCACACAGATTGCTGAATTGATTTCTCCATATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS TCA 72 bp TCTCTGTCCCGGCTAGCCCGGCCGGCGGAGAGGCGCTaGTCGCTCACGACCGGGAGAGACCCAAGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: SLSRLARPAERR*SLTTGRDPRPR
Trigger: CCGGGGCCTTGGGTCTCTCCCGGTCGTGAGCGATCAGCGCCTCTCCGCCGGCCGGGCTAGCCGGGACAGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000356828.7
ENST00000547428.1
CDS CAA 90 bp TCCCGGCCATGGTACCGAGGCTGGAGACGCCGCGGTCTCGTCCTGTaGCTCACTGCCTCCTCTCTTCGTGGCCGTCTCCTCTCTGTCCCG +
Preference number: 6 (lower is better)
Translates to: SRPWYRGWRRRGLVL*LTASSLRGRLLSVP
Trigger: CGGGACAGAGAGGAGACGGCCACGAAGAGAGGAGGCAGTGAGCAACAGGACGAGACCGCGGCGTCTCCAGCCTCGGTACCATGGCCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000356828.7
ENST00000547428.1
CDS GCA 72 bp AGGCTGGAGACGCCGCGGTCTCGTCCTGTTGCTCACTaGCTCCTCTCTTCGTGGCCGTCTCCTCTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: RLETPRSRPVAH*LLSSWPSPLCP
Trigger: GGGACAGAGAGGAGACGGCCACGAAGAGAGGAGGCAGTGAGCAACAGGACGAGACCGCGGCGTCTCCAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000356828.7
ENST00000547428.1
CDS GCA 72 bp GGTACCGAGGCTGGAGACGCCGCGGTCTCGTCCTGTTaGTCACTGCCTCCTCTCTTCGTGGCCGTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GTEAGDAAVSSC*SLPPLFVAVSS
Trigger: AGAGGAGACGGCCACGAAGAGAGGAGGCAGTGAGCAACAGGACGAGACCGCGGCGTCTCCAGCCTCGGTACC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000356828.7
ENST00000547428.1
CDS CAA 72 bp TGGTACCGAGGCTGGAGACGCCGCGGTCTCGTCCTGTaGCTCACTGCCTCCTCTCTTCGTGGCCGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: WYRGWRRRGLVL*LTASSLRGRLL
Trigger: GAGGAGACGGCCACGAAGAGAGGAGGCAGTGAGCAACAGGACGAGACCGCGGCGTCTCCAGCCTCGGTACCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000356828.7
ENST00000547428.1
CDS TCA 72 bp GCCAAGGAACCCCTGGGCTTGTCTGAGTGGCTTGCGTaGCACTGCGTTGTTTCTTCAGATCATACTTTCCAC +
Preference number: 6 (lower is better)
Translates to: AKEPLGLSEWLA*HCVVSSDHTFH
Trigger: GTGGAAAGTATGATCTGAAGAAACAACGCAGTGTCACGCAAGCCACTCAGACAAGCCCAGGGGTTCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000545232.6
ENST00000548712.5
CDS CAA 72 bp CCCTGGGCTTGTCTGAGTGGCTTGCGTGACACTGCGTaGTTTCTTCAGATCATACTTTCCACTGGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: PWACLSGLRDTA*FLQIILSTGQQ
Trigger: CTGCTGACCAGTGGAAAGTATGATCTGAAGAAACAACGCAGTGTCACGCAAGCCACTCAGACAAGCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000545232.6
ENST00000548712.5
CDS CCA 72 bp TCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTAGAGCTCCTCACCTCC +
Preference number: 6 (lower is better)
Translates to: SGAFEVCVVFTC*ADATTVELLTS
Trigger: GGAGGTGAGGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551973.5
CDS CAA 72 bp AGAAGGCCAAGGAACCCCTGGGCTTGTCTGAGTGGCTaGCGTGACACTGCGTTGTTTCTTCAGATCATACTT +
Preference number: 6 (lower is better)
Translates to: RRPRNPWACLSG*RDTALFLQIIL
Trigger: AAGTATGATCTGAAGAAACAACGCAGTGTCACGCAAGCCACTCAGACAAGCCCAGGGGTTCCTTGGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000545232.6
ENST00000548712.5
CDS GCA 72 bp ACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACTGTAGAGCTCCTCACC +
Preference number: 6 (lower is better)
Translates to: TSGAFEVCVVFT*WADATTVELLT
Trigger: GGTGAGGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551973.5
CDS CAA 90 bp CAAGCAGTCAGTTGCCAGGGTTTCTTAGACTCCTCTGGTACTCATTaGGGTGATTATGCAATTCACAGCACACCAATCTCCACCACAGCC +
Preference number: 6 (lower is better)
Translates to: QAVSCQGFLDSSGTH*GDYAIHSTPISTTA
Trigger: GGCTGTGGTGGAGATTGGTGTGCTGTGAATTGCATAATCACCCAAATGAGTACCAGAGGAGTCTAAGAAACCCTGGCAACTGACTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS GCA 72 bp ACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACTGTAGAGCTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: TSGAFEVCVVFT*WADATTVELSL
Trigger: AAGGGAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545232.6
ENST00000548045.5
CDS CCA 72 bp TCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTAGAGCTCTGTGTAGGT +
Preference number: 6 (lower is better)
Translates to: SGAFEVCVVFTC*ADATTVELCVG
Trigger: ACCTACACAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS GCA 72 bp ACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACTGTAGAGCTCTGTGTA +
Preference number: 6 (lower is better)
Translates to: TSGAFEVCVVFT*WADATTVELCV
Trigger: TACACAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS CCA 72 bp TCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTAGAGCTCTCCCTTAAA +
Preference number: 6 (lower is better)
Translates to: SGAFEVCVVFTC*ADATTVELSLK
Trigger: TTTAAGGGAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545232.6
ENST00000548045.5
CDS TCA 72 bp AACCAACTGGACGATTACAAAGGTAATGCCGAAGGCTaGTATTGCCTAATTGGTCTGGTGTCACCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: NQLDDYKGNAEG*YCLIGLVSPGS
Trigger: TGAACCAGGTGACACCAGACCAATTAGGCAATATCAGCCTTCGGCATTACCTTTGTAATCGTCCAGTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS GCA 72 bp ACATCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTaGTGGGCAGATGCGACTACTGTAGAGCTCTTCAAT +
Preference number: 6 (lower is better)
Translates to: TSGAFEVCVVFT*WADATTVELFN
Trigger: ATTGAAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550544.5
ENST00000551980.1
CDS CCA 72 bp TCAGGAGCATTTGAAGTTTGCGTTGTCTTCACTTGCTaGGCAGATGCGACTACTGTAGAGCTCTTCAATCTA +
Preference number: 6 (lower is better)
Translates to: SGAFEVCVVFTC*ADATTVELFNL
Trigger: TAGATTGAAGAGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550544.5
ENST00000551980.1
CDS CAA 72 bp AGTTGCCAGGGTTTCTTAGACTCCTCTGGTACTCATTaGGGTGATTATGCAATTCACAGCACACCAATCTCC +
Preference number: 6 (lower is better)
Translates to: SCQGFLDSSGTH*GDYAIHSTPIS
Trigger: GGAGATTGGTGTGCTGTGAATTGCATAATCACCCAAATGAGTACCAGAGGAGTCTAAGAAACCCTGGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS CAA 72 bp AAAAGGTCCCTATTCCTGGTGAAAGCAAGCAGTCAGTaGCCAGGGTTTCTTAGACTCCTCTGGTACTCATTT +
Preference number: 6 (lower is better)
Translates to: KRSLFLVKASSQ*PGFLRLLWYSF
Trigger: AAATGAGTACCAGAGGAGTCTAAGAAACCCTGGCAACTGACTGCTTGCTTTCACCAGGAATAGGGACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547428.1
CDS CCA 72 bp TACCACAAGATGATCAATATGTACAGTTACAGGAGCTaGTTCAAGGGATACTGTACTACTCCGGGGACTATC +
Preference number: 6 (lower is better)
Translates to: YHKMINMYSYRS*FKGYCTTPGTI
Trigger: GATAGTCCCCGGAGTAGTACAGTATCCCTTGAACCAGCTCCTGTAACTGTACATATTGATCATCTTGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279907.12
ENST00000545232.6
ENST00000548712.5
CDS CCA 72 bp CGAACAGGAGCACACATAATTTCAAGATGTGAACTTTaGGTGGCATCTGCCTCTATTCTTATCATCTGCCAA +
Preference number: 6 (lower is better)
Translates to: RTGAHIISRCEL*VASASILIICQ
Trigger: TTGGCAGATGATAAGAATAGAGGCAGATGCCACCCAAAGTTCACATCTTGAAATTATGTGTGCTCCTGTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS CCA 72 bp ATCCCCATTTTCTGTAGGCAAATAATCAGGTACCACTaGGCTCACACTTTCAGAAACAGGAGACTTAAGAGT +
Preference number: 6 (lower is better)
Translates to: IPIFCRQIIRYH*AHTFRNRRLKS
Trigger: ACTCTTAAGTCTCCTGTTTCTGAAAGTGTGAGCCCAGTGGTACCTGATTATTTGCCTACAGAAAATGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS GCA 72 bp ATGATGAAGAAGAGCATCTTTTTCCAAGTGAGCCTCTaGAAGAGCCATTTTAGCTTTAGCCAGTTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: MMKKSIFFQVSL*KSHFSFSQFLF
Trigger: AAACAGGAACTGGCTAAAGCTAAAATGGCTCTTGCAGAGGCTCACTTGGAAAAAGATGCTCTTCTTCATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS CAA 72 bp AAGTCTGCGGCTCTTTTTGTGACTCTGCATATCTTGTaGGTTGACAAATCCAAATGGAAAGAGGGAATGAGT +
Preference number: 6 (lower is better)
Translates to: KSAALFVTLHIL*VDKSKWKEGMS
Trigger: ACTCATTCCCTCTTTCCATTTGGATTTGTCAACCAACAAGATATGCAGAGTCACAAAAAGAGCCGCAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS CAA 72 bp TACAAGTCTGCGGCTCTTTTTGTGACTCTGCATATCTaGTTGGTTGACAAATCCAAATGGAAAGAGGGAATG +
Preference number: 6 (lower is better)
Translates to: YKSAALFVTLHI*LVDKSKWKEGM
Trigger: CATTCCCTCTTTCCATTTGGATTTGTCAACCAACAAGATATGCAGAGTCACAAAAAGAGCCGCAGACTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS CAA 90 bp CCTGATTACAAGTCTGCGGCTCTTTTTGTGACTCTGCATATCTTGTaGGTTGACAAATCCAAATGGAAAGAGGGAATGAGTCTACAAAAC +
Preference number: 6 (lower is better)
Translates to: PDYKSAALFVTLHIL*VDKSKWKEGMSLQN
Trigger: GTTTTGTAGACTCATTCCCTCTTTCCATTTGGATTTGTCAACCAACAAGATATGCAGAGTCACAAAAAGAGCCGCAGACTTGTAATCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS CAA 90 bp ATACCTGATTACAAGTCTGCGGCTCTTTTTGTGACTCTGCATATCTaGTTGGTTGACAAATCCAAATGGAAAGAGGGAATGAGTCTACAA +
Preference number: 6 (lower is better)
Translates to: IPDYKSAALFVTLHI*LVDKSKWKEGMSLQ
Trigger: TTGTAGACTCATTCCCTCTTTCCATTTGGATTTGTCAACCAACAAGATATGCAGAGTCACAAAAAGAGCCGCAGACTTGTAATCAGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS TCA 72 bp TCTTTAAAAGTCAAAACCTCTCCTCTCTGTGGATCCTaGATACGAGTAAATCTCAAATCTCCATGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SLKVKTSPLCGS*IRVNLKSPCSQ
Trigger: CTGGGAACATGGAGATTTGAGATTTACTCGTATTCAGGATCCACAGAGAGGAGAGGTTTTGACTTTTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS GCA 72 bp GTAGAGCTCTTCAATCTATTAGTCTTTAACTACGACTaGCATCTCTGTTACCAATCACAACCTAAGCTACCA +
Preference number: 6 (lower is better)
Translates to: VELFNLLVFNYD*HLCYQSQPKLP
Trigger: TGGTAGCTTAGGTTGTGATTGGTAACAGAGATGGCAGTCGTAGTTAAAGACTAATAGATTGAAGAGCTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550544.5
ENST00000551980.1
CDS TCA 72 bp TCACTAGATTCACTTTGTGATGTATTTAGAGATACCTaGTTACAAGTCTGCGGCTCTTTTTGTGACTCTGCA +
Preference number: 6 (lower is better)
Translates to: SLDSLCDVFRDT*LQVCGSFCDSA
Trigger: TGCAGAGTCACAAAAAGAGCCGCAGACTTGTAATCAGGTATCTCTAAATACATCACAAAGTGAATCTAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS GCA 72 bp AATACGAGTAAATCTCAAATCTCCATGTTCCCAGTGTaGATTTACACTATAGATCCGAAGCTGAGAAAGTTC +
Preference number: 6 (lower is better)
Translates to: NTSKSQISMFPV*IYTIDPKLRKF
Trigger: GAACTTTCTCAGCTTCGGATCTATAGTGTAAATGCACACTGGGAACATGGAGATTTGAGATTTACTCGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS CAA 72 bp AAAATGTATCTGATGAAGAAGGCTTCTGACCACCATTaGTCAAAGGCTCAGACTCTGTACTATAATACTCCT +
Preference number: 6 (lower is better)
Translates to: KMYLMKKASDHH*SKAQTLYYNTP
Trigger: AGGAGTATTATAGTACAGAGTCTGAGCCTTTGACAAATGGTGGTCAGAAGCCTTCTTCATCAGATACATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS TCA 72 bp ATTTACACTATAGATCCGAAGCTGAGAAAGTTCAAATaGTGCATTGAAGGCTTTTGCTCCAATTCTGATGAC +
Preference number: 6 (lower is better)
Translates to: IYTIDPKLRKFK*CIEGFCSNSDD
Trigger: GTCATCAGAATTGGAGCAAAAGCCTTCAATGCATCATTTGAACTTTCTCAGCTTCGGATCTATAGTGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000356828.7
CDS TCA 72 bp CTTCAAATCTCTTCCATCTTCGTAGTTCCAAAGTCTTaGTTGAAAAATCTCTTGTTCAACTGTTCCCTAGTG +
Preference number: 6 (lower is better)
Translates to: LQISSIFVVPKS*LKNLLFNCSLV
Trigger: CACTAGGGAACAGTTGAACAAGAGATTTTTCAATCAAGACTTTGGAACTACGAAGATGGAAGAGATTTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548712.5
CDS CAA 90 bp CTATATCCCTCTTCAAATCTCTTCCATCTTCGTAGTTCCAAAGTCTaGATTGAAAAATCTCTTGTTCAACTGTTCCCTAGTGAAGTCAAA +
Preference number: 6 (lower is better)
Translates to: LYPSSNLFHLRSSKV*IEKSLVQLFPSEVK
Trigger: TTTGACTTCACTAGGGAACAGTTGAACAAGAGATTTTTCAATCAAGACTTTGGAACTACGAAGATGGAAGAGATTTGAAGAGGGATATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548712.5
CDS GCA 72 bp AACTTTAGCATTAAGCCATCAACTCGAACATCAACATaGTCGTCAGATTTTGAATTGTCATTCAACTTGTAC +
Preference number: 6 (lower is better)
Translates to: NFSIKPSTRTST*SSDFELSFNLY
Trigger: GTACAAGTTGAATGACAATTCAAAATCTGACGAGCATGTTGATGTTCGAGTTGATGGCTTAATGCTAAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279907.12
ENST00000545232.6
CDS CAA 72 bp TCTTCAAATCTCTTCCATCTTCGTAGTTCCAAAGTCTaGATTGAAAAATCTCTTGTTCAACTGTTCCCTAGT +
Preference number: 6 (lower is better)
Translates to: SSNLFHLRSSKV*IEKSLVQLFPS
Trigger: ACTAGGGAACAGTTGAACAAGAGATTTTTCAATCAAGACTTTGGAACTACGAAGATGGAAGAGATTTGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548712.5