RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UHRF1BP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000065060

Ensembl transcript IDs: ENST00000192788.6, ENST00000452449.6

Found 678 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGTGCCAGGGACCCCAGGGAGACAGAAGAGCCACTCAGCACAGCTaGGAAAGACAAGCAGGACTCCAGGCGGACAACAGGGGGCTCAGA +
Preference number: 1 (lower is better)
Translates to: MCQGPQGDRRATQHS*ERQAGLQADNRGLR
Trigger: TCTGAGCCCCCTGTTGTCCGCCTGGAGTCCTGCTTGTCTTTCCCAGCTGTGCTGAGTGGCTCTTCTGTCTCCCTGGGGTCCCTGGCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp CCAAACCACCAAGGGCTGAGGAGAGAACTGGTAAGGTCACAGAGCTaGGAAAGCAGATGTGCCAGGGACCCCAGGGAGACAGAAGAGCCA +
Preference number: 1 (lower is better)
Translates to: PNHQGLRRELVRSQS*ESRCARDPRETEEP
Trigger: TGGCTCTTCTGTCTCCCTGGGGTCCCTGGCACATCTGCTTTCCCAGCTCTGTGACCTTACCAGTTCTCTCCTCAGCCCTTGGTGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTaGGTGACCGAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCT +
Preference number: 1 (lower is better)
Translates to: VCYGKLWDMESLVAL*VTEEVGTFACSHRP
Trigger: AGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp CCAAAGCTCAGGTCATGGACTTTTCAGGTCTGCTATGGGAAGCTCTaGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTG +
Preference number: 1 (lower is better)
Translates to: PKLRSWTFQVCYGKL*DMESLVALWVTEEV
Trigger: CACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR GCA 90 bp ACTCCACTACCATGGCCAAAGCTCAGGTCATGGACTTTTCAGGTCTaGTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: TPLPWPKLRSWTFQV*YGKLWDMESLVALW
Trigger: CCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGGCCATGGTAGTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp ACTACCATGGCCAAAGCTCAGGTCATGGACTTTTCAGGTCTGCTATaGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGAC +
Preference number: 1 (lower is better)
Translates to: TTMAKAQVMDFSGLL*EALGHGIFGGSVGD
Trigger: GTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGGCCATGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATaGCCAAAGCTCAGGTCATGGACTTTTCAGGTCTGCTATGGGAAG +
Preference number: 1 (lower is better)
Translates to: PTLLCWTISCSTPLP*PKLRSWTFQVCYGK
Trigger: CTTCCCATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp ACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGCTCAGGTCATaGACTTTTCAGGTCTGCTATGGGAAGCTCTGGGACATGGAATCT +
Preference number: 1 (lower is better)
Translates to: TISCSTPLPWPKLRS*TFQVCYGKLWDMES
Trigger: AGATTCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 90 bp TTCCGACAGAAGGTAGGGGAGCAACTAGGTAAAGGCCTTAGTGTCTaGAAGGATAGTGCTTCACACCAGATTCTCTCTGAAACCCTTAGT +
Preference number: 1 (lower is better)
Translates to: FRQKVGEQLGKGLSV*KDSASHQILSETLS
Trigger: ACTAAGGGTTTCAGAGAGAATCTGGTGTGAAGCACTATCCTTTCAGACACTAAGGCCTTTACCTAGTTGCTCCCCTACCTTCTGTCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp AGAGCCCTAGAGCTAGTAGTACAGGACCGGGTCCTTGCTCTTGATTaGATATTTGATCTAACTCCCCTCTGCTTTCATCTTTGCAGGATA +
Preference number: 1 (lower is better)
Translates to: RALELVVQDRVLALD*IFDLTPLCFHLCRI
Trigger: TATCCTGCAAAGATGAAAGCAGAGGGGAGTTAGATCAAATATCCAATCAAGAGCAAGGACCCGGTCCTGTACTACTAGCTCTAGGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 90 bp ACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACATAAAGGTTaGGGCCCATGGCAAAATGAGGGTCAGGTGAAATATATGGTAAAG +
Preference number: 1 (lower is better)
Translates to: TGASPFRAIKSTHKG*GPWQNEGQVKYMVK
Trigger: CTTTACCATATATTTCACCTGACCCTCATTTTGCCATGGGCCTCAACCTTTATGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp GTAGGTAAATTATACCAAGAAATGCCTATTCGACATTTCTTTGCATaGAGGGATGCCAGAGGTATATGGTGGGTGAGGGGAGGAAGGGAT +
Preference number: 1 (lower is better)
Translates to: VGKLYQEMPIRHFFA*RDARGIWWVRGGRD
Trigger: ATCCCTTCCTCCCCTCACCCACCATATACCTCTGGCATCCCTCCATGCAAAGAAATGTCGAATAGGCATTTCTTGGTATAATTTACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 90 bp ACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCGTaGAGCTTTCCTGAGCATGTCTTAGTAAAGATTCTAATTCTCTTT +
Preference number: 1 (lower is better)
Translates to: TTIQCHREDFEAVLS*SFPEHVLVKILILF
Trigger: AAAGAGAATTAGAATCTTTACTAAGACATGCTCAGGAAAGCTTCACGAGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 90 bp CTCATATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTaGACCTTTCCTCCCTTTATCATATATCTTGTAAATAAGGTCACT +
Preference number: 1 (lower is better)
Translates to: LIWIYLHPLIILAVL*TFPPFIIYLVNKVT
Trigger: AGTGACCTTATTTACAAGATATATGATAAAGGGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCATATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCCCTGCCATGAAACCATaGGGTGAAATGGCCCTACAG +
Preference number: 2 (lower is better)
Translates to: VCYGKLWDMESLVALWVTPAMKP*GEMALQ
Trigger: CTGTAGGGCCATTTCACCTCATGGTTTCATGGCAGG...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGTTCACACAGGCCTGTaGAGGAAGCAAATGTCCCTG +
Preference number: 2 (lower is better)
Translates to: VCYGKLWDMESLVALWVTVHTGL*RKQMSL
Trigger: CAGGGACATTTGCTTCCTTCACAGGCCTGTGTGAAC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGGAGGTGGGTACTTTTaGTTGTTCACACAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: VCYGKLWDMESLVALWVTGGGYF*LFTQAC
Trigger: ACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 90 bp CACAGGGCAAGCCCCAGTTTCCTGGGATACAATCATGCTTTGCCCTaGTCCTCAGTCCAAGTAAGAACAGCTAGTGGAAAGCACACCCAC +
Preference number: 2 (lower is better)
Translates to: HRASPSFLGYNHALP*SSVQVRTASGKHTH
Trigger: GTGGGTGTGCTTTCCACTAGCTGTTCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGGGCTTGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 90 bp GCCACACACAGGGCAAGCCCCAGTTTCCTGGGATACAATCATGCTTaGCCCTTGTCCTCAGTCCAAGTAAGAACAGCTAGTGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: ATHRASPSFLGYNHA*PLSSVQVRTASGKH
Trigger: GTGCTTTCCACTAGCTGTTCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 90 bp ATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTACTTTTGCTaGTTCACACAGGCCTGTGAAGGAAGCAAATGTCCCTGCCATGAA +
Preference number: 2 (lower is better)
Translates to: IFGGSVGDRGGGYFC*FTQACEGSKCPCHE
Trigger: TTCATGGCAGGGACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCCCTGGGATACAATCATaGTTTGCCCTTGTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: VCYGKLWDMESLVALWVTPGIQS*FALVLS
Trigger: ACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGG...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGCAAATGTCCCTGCCATaGAACCATGAGGTGAAATGG +
Preference number: 2 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKQMSLP*NHEVKW
Trigger: CCATTTCACCTCATGGTTTCATGGCAGGGACATTTG...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAGATCTCCTGAACTCGTaGTCTCCCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRDLLNS*SPRLGL
Trigger: GAGGCCGAGGCGGGGAGATCACGAGTTCAGGAGATC...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAGCCACAGCAGCACATTaGTCTCTCCTCCCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRATAAH*SLLPLS
Trigger: GCTGAGGGGGAGGAGAGATCAATGTGCTGCTGTGGC...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAACCCCTGGCATATCATaGCACCAACCTAGCTCAGCG +
Preference number: 2 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTTPGIS*HQPSSA
Trigger: CGCTGAGCTAGGTTGGTGGCATGATATGCCAGGGGT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAGATAGCCTCTCTCCTTaGCACAGATGGCTGAGCCAC +
Preference number: 2 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTDSLSP*HRWLSH
Trigger: GTGGCTCAGCCATCTGTGCCAAGGAGAGAGGCTATC...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 90 bp GTGAGGAAGATCAAATCCCAAGTCTGGCCACTTAGCAAAGCCTCATaGTTGAAGGTTATCCAAGAGTGTTTCCCCTTGTGCCATGGGGAA +
Preference number: 2 (lower is better)
Translates to: VRKIKSQVWPLSKAS*LKVIQECFPLCHGE
Trigger: TTCCCCATGGCACAAGGGGAAACACTCTTGGATAACCTTCAACAATGAGGCTTTGCTAAGTGGCCAGACTTGGGATTTGATCTTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACACTAAGGCTCCATTTGTaGCATGGACAAGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTLRLHL*HGQELW
Trigger: CCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAG...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGATACAATCATGCTTTaGCCTTGTCCTCAGTCCAAG +
Preference number: 2 (lower is better)
Translates to: EEVGTFACSHRPVKEANVDTIML*PCPQSK
Trigger: CTTGGACTGAGGACAAGGGCAAAGCATGATTGTATC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATTCAAGCGATTCTCCTaGTTCAGCCTCCCGAGTGGC +
Preference number: 2 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRFKRFS*FSLPSG
Trigger: GCCACTCGGGAGGCTGAAGCAGGAGAATCGCTTGAA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCATCCCCCACTGACCCCTaGCATATCATGCCACCAACC +
Preference number: 2 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPSPTDP*HIMPPT
Trigger: GGTTGGTGGCATGATATGCCAGGGGTCAGTGGGGGA...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACATATACAGGCAAGACATaGTGCTTGTGCCACACACAG +
Preference number: 2 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTYTGKT*CLCHTQ
Trigger: CTGTGTGTGGCACAAGCATCATGTCTTGCCTGTATA...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATGCCAGAGGTATATGGTaGGTGAGGGGAGGAAGGGAT +
Preference number: 2 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYARGIW*VRGGRD
Trigger: ATCCCTTCCTCCCCTCACCCACCATATACCTCTGGC...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAAACCATGAGGTGAAATaGCCCTACAGTGTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTNHEVK*PYSVEK
Trigger: CTTCTCAACACTGTAGGGCCATTTCACCTCATGGTT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 90 bp GAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTaGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAA +
Preference number: 2 (lower is better)
Translates to: EAFKLQGYVRGGVYT*YIPHTGASPFRAIK
Trigger: TTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTTGGACTTTTCAGGTCTaGTATGGGAAGCTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSWTFQV*YGKLWD
Trigger: GTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCA...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCTTTGCATGGAGGGATaGCAGAGGTATATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSLCMEG*QRYMVG
Trigger: ACCCACCATATACCTCTGGCATCCCTCCATGCAAAG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACAAGCCCCAGTTTCCTaGGATACAATCATGCTTTGC +
Preference number: 2 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRQAPVS*DTIMLC
Trigger: GCAAAGCATGATTGTATCCCAGGAAACTGGGGCTTG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGGAAGCTCTGGGACATaGAATCTTTGGTGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSGSSGT*NLWWLC
Trigger: ACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATTTTCAGGTCTGCTATaGGAAGCTCTGGGACATGGA +
Preference number: 2 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRFSGLL*EALGHG
Trigger: TCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 90 bp CAGATCAACATTCTGCCTTTGAAAGAGGCACTAAGGAGTAGTTTGTaGAGGGACACAGTTACCCTCTCAGTTGTATATTACCAAGTAGCC +
Preference number: 2 (lower is better)
Translates to: QINILPLKEALRSSL*RDTVTLSVVYYQVA
Trigger: GGCTACTTGGTAATATACAACTGAGAGGGTAACTGTGTCCCTCAACAAACTACTCCTTAGTGCCTCTTTCAAAGGCAGAATGTTGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATCATGAAACCATGAGGTaGAATGGCCCTACAGTGTTG +
Preference number: 2 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYHETMR*NGPTVL
Trigger: CAACACTGTAGGGCCATTTCACCTCATGGTTTCATG...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAAGCCTTGGTACTTACTaGATATGTTTTTACTCCCAC +
Preference number: 2 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTSLGTY*ICFYSH
Trigger: GTGGGAGTAAAAACATATCCAGTAAGTACCAAGGCT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATCTTTACTAAGGCTATaGGATAGAGCCCTAGAGCTA +
Preference number: 2 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRSLLRL*DRALEL
Trigger: TAGCTCTAGGGCTCTATCTCATAGCCTTAGTAAAGA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCCCTATCACATTTCCTaGGGGAGAATTTCAAGACAC +
Preference number: 2 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSPYHIS*GRISRH
Trigger: GTGTCTTGAAATTCTCCCTCAGGAAATGTGATAGGG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGCAGTCCAAAAGGGCTaGCACTGCTACTTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: SSHITMAIFQTTFFALPPAVQKG*HCYFFL
Trigger: AAGGAAAAAGTAGCAGTGTCAGCCCTTTTGGACTGC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCACAATGGCCAAAGCTaGCACATAAGGAAAGACAGA +
Preference number: 2 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSHNGQS*HIRKDR
Trigger: TCTGTCTTTCCTTATGTGGCAGCTTTGGCCATTGTG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAATTTTGGCTGTTCTCTaGACCTTTCCTCCCTTTATC +
Preference number: 2 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRILAVL*TFPPFI
Trigger: GATAAAGGGAGGAAAGGTCCAGAGAACAGCCAAAAT...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGCAAAGCCTCATTGTTaGAGGTTATCCAAGAGTGTT +
Preference number: 2 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSAKPHC*RLSKSV
Trigger: AACACTCTTGGATAACCTTCAACAATGAGGCTTTGC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTATGCTATGGGAAGCTCTaGGACATGGAATCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLCYGKL*DMESLV
Trigger: CACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCA...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAGTCCTTGCTCTTGATTaGATATTTGATCTAACTCCC +
Preference number: 2 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRVLALD*IFDLTP
Trigger: GGGAGTTAGATCAAATATCCAATCAAGAGCAAGGAC...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR TCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCATTCAGTATGGAAAGGTaGATGGTCGAGACTTTAGTA +
Preference number: 2 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPFSMER*MVETLV
Trigger: TACTAAAGTCTCGACCATTCACCTTTCCATACTGAA...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTAATTTCAAGACACAATaGCCAAAGCTGCCACATAAG +
Preference number: 2 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSNFKTQ*PKLPHK
Trigger: CTTATGTGGCAGCTTTGGCCATTGTGTCTTGAAATT...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 90 bp AACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTaGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: NFFCELLGTVFQSQS*TIVITESLCFFQAD
Trigger: ATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
3UTR-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCCCATCCCATAGTAACTaGTGTTTCAAAAATTGCCTT +
Preference number: 2 (lower is better)
Translates to: SSHITMAIFQTTFFALPPPSHSN*CFKNCL
Trigger: AAGGCAATTTTTGAAACACCAGTTACTATGGGATGG...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 90 bp ATGGTCGAGACTTTAGTAACATCACTAAGTTACTATTTTACCATCTaGCCAAGTAAAGGTAAGTTAGCTGATGAACGTCTGTCCAATCAA +
Preference number: 2 (lower is better)
Translates to: MVETLVTSLSYYFTI*PSKGKLADERLSNQ
Trigger: TTGATTGGACAGACGTTCATCAGCTAACTTACCTTTACTTGGCAAGATGGTAAAATAGTAACTTAGTGATGTTACTAAAGTCTCGACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR GCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTGGTTTTGTATAAAGTaGTGTTCTCTGTTATCTCCA +
Preference number: 2 (lower is better)
Translates to: SSHITMAIFQTTFFALPPWFCIK*CSLLSP
Trigger: TGGAGATAACAGAGAACAGCACTTTATACAAAACCA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR GCA 72 bp AGAACTGGTAAGGTCACAGAGCTGGGAAAGCAGATGTaGCAGGGACCCCAGGGAGACAGAAGAGCCACTCAG +
Preference number: 3 (lower is better)
Translates to: RTGKVTELGKQM*QGPQGDRRATQ
Trigger: CTGAGTGGCTCTTCTGTCTCCCTGGGGTCCCTGGCACATCTGCTTTCCCAGCTCTGTGACCTTACCAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp ATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTaGGATACAATCATGCTTTGCCCTTGTCCTCAGTCC +
Preference number: 3 (lower is better)
Translates to: MLVPHTGQAPVS*DTIMLCPCPQS
Trigger: GGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp GGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTaGGTGACCGAGGAGGTGGGTACTTTTGCTTGTTCA +
Preference number: 3 (lower is better)
Translates to: GKLWDMESLVAL*VTEEVGTFACS
Trigger: TGAACAAGCAAAAGTACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 72 bp AGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTaGCCGAGGAGGTGGGTACTTTTGCTTGTTCACACA +
Preference number: 3 (lower is better)
Translates to: SSGTWNLWWLCG*PRRWVLLLVHT
Trigger: TGTGTGAACAAGCAAAAGTACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp AGGTCATGGACTTTTCAGGTCTGCTATGGGAAGCTCTaGGACATGGAATCTTTGGTGGCTCTGTGGGTGACC +
Preference number: 3 (lower is better)
Translates to: RSWTFQVCYGKL*DMESLVALWVT
Trigger: GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp TGTTCCACTCCACTACCATGGCCAAAGCTCAGGTCATaGACTTTTCAGGTCTGCTATGGGAAGCTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: CSTPLPWPKLRS*TFQVCYGKLWD
Trigger: GTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGGCCATGGTAGTGGAGTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGGGTGGGTACTTTTGCTaGTTCACACAGGCCTGTGAA +
Preference number: 3 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKGGYFC*FTQACE
Trigger: TTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACC...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR GCA 72 bp ACACAGGGCAAGCCCCAGTTTCCTGGGATACAATCATaGTTTGCCCTTGTCCTCAGTCCAAGTAAGAACAGC +
Preference number: 3 (lower is better)
Translates to: TQGKPQFPGIQS*FALVLSPSKNS
Trigger: GCTGTTCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGGGCTTGCCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR GCA 72 bp CCATGGCCAAAGCTCAGGTCATGGACTTTTCAGGTCTaGTATGGGAAGCTCTGGGACATGGAATCTTTGGTG +
Preference number: 3 (lower is better)
Translates to: PWPKLRSWTFQV*YGKLWDMESLV
Trigger: CACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp GCCAAAGCTCAGGTCATGGACTTTTCAGGTCTGCTATaGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCT +
Preference number: 3 (lower is better)
Translates to: AKAQVMDFSGLL*EALGHGIFGGS
Trigger: AGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp CTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATaGCCAAAGCTCAGGTCATGGACTTTTCAGGTCTGC +
Preference number: 3 (lower is better)
Translates to: LCWTISCSTPLP*PKLRSWTFQVC
Trigger: GCAGACCTGAAAAGTCCATGACCTGAGCTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACATGGGACATGGAATCTTaGGTGGCTCTGTGGGTGACC +
Preference number: 3 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTWDMES*VALWVT
Trigger: GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCA...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 72 bp CACAGGGCAATTAGGCTTTTGGCCACAGCAGCACATTaGTCTCTCCTCCCCCTCAGCAATGCTTGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: HRAIRLLATAAH*SLLPLSNACFF
Trigger: AAAGAAACAAGCATTGCTGAGGGGGAGGAGAGATCAATGTGCTGCTGTGGCCAAAAGCCTAATTGCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 72 bp AATCCCAAGTCTGGCCACTTAGCAAAGCCTCATTGTTaGAGGTTATCCAAGAGTGTTTCCCCTTGTGCCATG +
Preference number: 3 (lower is better)
Translates to: NPKSGHLAKPHC*RLSKSVSPCAM
Trigger: CATGGCACAAGGGGAAACACTCTTGGATAACCTTCAACAATGAGGCTTTGCTAAGTGGCCAGACTTGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR GCA 72 bp AGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTaGTTCTTTCAAGCTGATCCAGTCCATCACTGGCAC +
Preference number: 3 (lower is better)
Translates to: SQSLTIVITESL*FFQADPVHHWH
Trigger: GTGCCAGTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
3UTR-3UTR CAA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCAATGGCCCTACAGTGTaGAGAAGATTCCACCTAGTA +
Preference number: 3 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSNGPTV*RRFHLV
Trigger: TACTAGGTGGAATCTTCTCAACACTGTAGGGCCATT...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCAAGGAGGTGGGTACTTTaGCTTGTTCACACAGGCCTG +
Preference number: 3 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPRRWVL*LVHTGL
Trigger: CAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCT...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 72 bp AAGGTAGGGGAGCAACTAGGTAAAGGCCTTAGTGTCTaGAAGGATAGTGCTTCACACCAGATTCTCTCTGAA +
Preference number: 3 (lower is better)
Translates to: KVGEQLGKGLSV*KDSASHQILSE
Trigger: TTCAGAGAGAATCTGGTGTGAAGCACTATCCTTTCAGACACTAAGGCCTTTACCTAGTTGCTCCCCTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp GAGCTAGTAGTACAGGACCGGGTCCTTGCTCTTGATTaGATATTTGATCTAACTCCCCTCTGCTTTCATCTT +
Preference number: 3 (lower is better)
Translates to: ELVVQDRVLALD*IFDLTPLCFHL
Trigger: AAGATGAAAGCAGAGGGGAGTTAGATCAAATATCCAATCAAGAGCAAGGACCCGGTCCTGTACTACTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp TTATACCAAGAAATGCCTATTCGACATTTCTTTGCATaGAGGGATGCCAGAGGTATATGGTGGGTGAGGGGA +
Preference number: 3 (lower is better)
Translates to: LYQEMPIRHFFA*RDARGIWWVRG
Trigger: TCCCCTCACCCACCATATACCTCTGGCATCCCTCCATGCAAAGAAATGTCGAATAGGCATTTCTTGGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATCAAAGTTTCACCATGTaGGCCAGGATGGTCTCGATC +
Preference number: 3 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYQSFTM*ARMVSI
Trigger: GATCGAGACCATCCTGGCCAACATGGTGAAACTTTG...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp AGGATTCCTCATAAACCTGCACCCATGTATAGTTTCTaGTGGCATCCCTTCTTAGACAATGAGCTCCTTACA +
Preference number: 3 (lower is better)
Translates to: RIPHKPAPMYSF*WHPFLDNELLT
Trigger: TGTAAGGAGCTCATTGTCTAAGAAGGGATGCCACCAGAAACTATACATGGGTGCAGGTTTATGAGGAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATGGATACAATCATGCTTaGCCCTTGTCCTCAGTCCAA +
Preference number: 3 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYGYNHA*PLSSVQ
Trigger: TTGGACTGAGGACAAGGGCAAAGCATGATTGTATCC...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATCTATTCGACATTTCTTaGCATGGAGGGATGCCAGAG +
Preference number: 3 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYLFDIS*HGGMPE
Trigger: CTCTGGCATCCCTCCATGCAAAGAAATGTCGAATAG...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 72 bp AGTCCTTTCAGAGCCATAAAAAGCACACATAAAGGTTaGGGCCCATGGCAAAATGAGGGTCAGGTGAAATAT +
Preference number: 3 (lower is better)
Translates to: SPFRAIKSTHKG*GPWQNEGQVKY
Trigger: ATATTTCACCTGACCCTCATTTTGCCATGGGCCTCAACCTTTATGTGTGCTTTTTATGGCTCTGAAAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR GCA 72 bp CCATATTACTATGGCAATATTTCAAACTACCTTCTTTaGACTACCACCCATCCCCCAACCCGTTTACCACTA +
Preference number: 3 (lower is better)
Translates to: PYYYGNISNYLL*TTTHPPTRLPL
Trigger: TAGTGGTAAACGGGTTGGGGGATGGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGCACTAAGGAGTAGTTaGTTGAGGGACACAGTTACC +
Preference number: 3 (lower is better)
Translates to: SSHITMAIFQTTFFALPPALRSS*LRDTVT
Trigger: GGTAACTGTGTCCCTCAACAAACTACTCCTTAGTGC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGGTGGTGTTTATACCTaGTATATTCCACACACGGGA +
Preference number: 3 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSGGVYT*YIPHTG
Trigger: TCCCGTGTGTGGAATATACAAGGTATAAACACCACC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 72 bp CAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCGTaGAGCTTTCCTGAGCATGTCTTAGTAAAGATTCTA +
Preference number: 3 (lower is better)
Translates to: QCHREDFEAVLS*SFPEHVLVKIL
Trigger: TAGAATCTTTACTAAGACATGCTCAGGAAAGCTTCACGAGAGAACAGCTTCAAAATCCTCCCTATGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp CTATCACATTTCCTGAGGGAGAATTTCAAGACACAATaGCCAAAGCTGCCACATAAGGAAAGACAGAAATTC +
Preference number: 3 (lower is better)
Translates to: LSHFLRENFKTQ*PKLPHKERQKF
Trigger: GAATTTCTGTCTTTCCTTATGTGGCAGCTTTGGCCATTGTGTCTTGAAATTCTCCCTCAGGAAATGTGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACCTCTGCTTTCATCTTaGCAGGATAGAGTCTATATT +
Preference number: 3 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRPLLSS*QDRVYI
Trigger: AATATAGACTCTATCCTGCAAAGATGAAAGCAGAGG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGCAAATTGCTATGAGCTaGGTTCCTTTTCCCAAAAAG +
Preference number: 3 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTQIAMS*VPFPKK
Trigger: CTTTTTGGGAAAAGGAACCAAGCTCATAGCAATTTG...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR-3UTR CAA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTAGGAGGTTAGCCTaGGTACTTACTGGATATGTT +
Preference number: 3 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYIRRLA*VLTGYV
Trigger: AACATATCCAGTAAGTACCAAGGCTAACCTCCTAAT...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR GCA 72 bp AATCCGATCAAGACATATCCATGGTTTTGTATAAAGTaGTGTTCTCTGTTATCTCCAAAAGCCCTTCCTGAT +
Preference number: 3 (lower is better)
Translates to: NPIKTYPWFCIK*CSLLSPKALPD
Trigger: ATCAGGAAGGGCTTTTGGAGATAACAGAGAACAGCACTTTATACAAAACCATGGATATGTCTTGATCGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp ACAGTGATTAGCAGTAATAAGGCTATTGTATGTAACTaGCATCCCCAAGAATTCTTTCCTCACTACCATTCA +
Preference number: 3 (lower is better)
Translates to: TVISSNKAIVCN*HPQEFFPHYHS
Trigger: TGAATGGTAGTGAGGAAAGAATTCTTGGGGATGCCAGTTACATACAATAGCCTTATTACTGCTAATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CCA 72 bp ATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTaGACCTTTCCTCCCTTTATCATATATCTTGTAAAT +
Preference number: 3 (lower is better)
Translates to: IYLHPLIILAVL*TFPPFIIYLVN
Trigger: ATTTACAAGATATATGATAAAGGGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 72 bp CTAGATTACCTTTCACTGCCTGGAAGTAGTGACATTTaGTTTCACTGTAAAATCCTACTTTCAGGTCATTTA +
Preference number: 3 (lower is better)
Translates to: LDYLSLPGSSDI*FHCKILLSGHL
Trigger: TAAATGACCTGAAAGTAGGATTTTACAGTGAAATCAAATGTCACTACTTCCAGGCAGTGAAAGGTAATCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR TCA 72 bp TTTCAGGTGGTTCACAGAACCAGTACACTCAAAGTTTaGCTAGATATTGCAACATTAAAATTTCCCAATACT +
Preference number: 3 (lower is better)
Translates to: FQVVHRTSTLKV*LDIATLKFPNT
Trigger: AGTATTGGGAAATTTTAATGTTGCAATATCTAGTCAAACTTTGAGTGTACTGGTTCTGTGAACCACCTGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAAGCTTCTGGGCCCACTaGCCTCGGGTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGSFWAH*PRVSMA
Trigger: GGCCATGGAGACCCGAGGCCAGTGGGCCCAGAAGCT...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTAGGGCCTGGGGACGATaGAACTCTGCCCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGRAWGR*NSARSL
Trigger: GAGAGAGCGGGCAGAGTTGCATCGTCCCCAGGCCCT...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTCCCACGGTGCCCAGCTaGTGGAGGGTCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGPTVPS*WRVSSS
Trigger: AGAGGAACTGACCCTCCAGCAGCTGGGCACCGTGGG...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTAGCACCTCCACTCACTaGGGCTGCCACCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGSTSTH*GCHPLI
Trigger: GATGAGGGGGTGGCAGCCCCAGTGAGTGGAGGTGCT...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTGGTCCAGGCGGGAGATaGGCAGATGGTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGGPGGR*ADGRRT
Trigger: AGTCCTCCTACCATCTGCTCATCTCCCGCCTGGACC...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGTTCCATGGCCAGAGTaGTGGGGATGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTVPWPE*WGWGLE
Trigger: CTCCAGGCCCCATCCCCATCACTCTGGCCATGGAAC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGATGTCCATGCAGGAACTaGCAGAGTCCCACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGCPCRN*QSPTVP
Trigger: GGGCACCGTGGGACTCTGGCAGTTCCTGCATGGACA...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAGGCACTGGGGGCTGGTaGAGTGATCTGCACAGGTTC +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGGTGGW*SDLHRF
Trigger: GAACCTGTGCAGATCACTCCACCAGCCCCCAGTGCC...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCTCCATCACCAGCTTCTaGGCCCACTGGCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTSITSF*AHWPRV
Trigger: GACCCGAGGCCAGTGGGCCCAGAAGCTGGTGATGGA...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGATCTCAAAGTACTGGCTaGGGCGGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGSQSTG*GGCCCC
Trigger: ACAGCAGCAGCAGCCGCCTCAGCCAGTACTTTGAGA...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTTTAGTCAGCTGCTCCTaGAGCCTCTGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGLVSCS*SLCSTS
Trigger: GGAGGTGCTGCAGAGGCTTCAGGAGCAGCTGACTAA...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGCCACAGCAGCACATTaGTCTCTCCTCCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTATAAH*SLLPLS
Trigger: GCTGAGGGGGAGGAGAGATCAATGTGCTGCTGTGGC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCCGTGCCTGGGCTTGCTaGCAGCGGAGGGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVRAWAC*QRRGRQ
Trigger: CTGCCTACCCCTCCGCTGGCAGCAAGCCCAGGCACG...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTGTCAGTTCCTCTGCTTaGAGGGCCACAGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGVSSSA*RATVRS
Trigger: GGACCTGACTGTGGCCCTGCAAGCAGAGGAACTGAC...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCTGGGAGACTGTCCATTaGGGGGCCGAGGATCCTCAC +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTWETVH*GAEDPH
Trigger: GTGAGGATCCTCGGCCCCCCAATGGACAGTCTCCCA...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGACTGTTGCTGTTGCCCTaGCTGCCACCAAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGLLLLP*LPPNAW
Trigger: CCAGGCATTTGGTGGCAGCCAGGGCAACAGCAACAG...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTGCGGTGGAAACCTGGTaGATGTCCAGGTCATCCACC +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGAVETW*MSRSST
Trigger: GGTGGATGACCTGGACATCCACCAGGTTTCCACCGC...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTCCAGCGGTGGAAACCTaGTGGATGTCCAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGPAVET*WMSRSS
Trigger: GGATGACCTGGACATCCACCAGGTTTCCACCGCTGG...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCACACCTCGCCGCGGCGTaGGCACCGGACACAGCCGCC +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPHLAAA*APDTAA
Trigger: GGCGGCTGTGTCCGGTGCTCACGCCGCGGCGAGGTG...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAATCGACAGCACCGGGTaGAGGATGCATAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGIDSTG*RMHKQS
Trigger: GCTCTGCTTATGCATCCTGCACCCGGTGCTGTCGAT...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGCCAGAGTCCCACGGTaGCCAGCTGCTGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVARVPR*PAAGGS
Trigger: TGACCCTCCAGCAGCTGGGCACCGTGGGACTCTGGC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGGCCTCGGGTCTCCATaGCCTCACAGTGGCGTACCC +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVGLGSP*PHSGVP
Trigger: GGGTACGCCACTGTGAGGCCATGGAGACCCGAGGCC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGCATCTGTCTTGGCCATaGGCTCCTTGGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKHLSWP*APWLGA
Trigger: TGCCCCCAGCCAAGGAGCCCATGGCCAAGACAGATG...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCACACCTCGCCGCGGCGTaGGCACCGGACACAGCCGCC +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPHLAAA*APDTAA
Trigger: GGCGGCTGTGTCCGGTGCTCACGCCGCGGCGAGGTG...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGGCTGCCAGTTGGGGTTaGCACTATAGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKAASWG*HYSPGA
Trigger: AGCTCCAGGGCTATAGTGTCAACCCCAACTGGCAGC...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGCCTCAATGGAGTGGTaGCTGGGTCCTGATCACCAT +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTASMEW*LGPDHH
Trigger: ATGGTGATCAGGACCCAGTCACCACTCCATTGAGGC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTACACAGCTTCCTTGGTaGGGTCCATGGTGGCATGTA +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGTQLPW*GPWWHV
Trigger: TACATGCCACCATGGACCTCACCAAGGAAGCTGTGT...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGGAGAAGACAAGGGCCTaGGGACGATGCAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKEKTRA*GRCNSA
Trigger: GGCAGAGTTGCATCGTCCCCAGGCCCTTGTCTTCTC...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp GGCTCTGTGGGTGACCGAGGAGGTGGGTACTTTTGCTaGTTCACACAGGCCTGTGAAGGAAGCAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: GSVGDRGGGYFC*FTQACEGSKCP
Trigger: GGGACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTCGGTCACCCACAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCTGGGTAGGGAGGTTGTaGAGTTTCCGACTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTWVGRL*SFRLQE
Trigger: TTCCTGCAGTCGGAAACTTCACAACCTCCCTACCCA...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGTTTCAGCCTCCCCTCTaGGGCCAAAAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKFQPPL*GQKKLP
Trigger: CGGAAGCTTCTTTTGGCCTCAGAGGGGAGGCTGAAA...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTACAAGAGGGCTCCCTTaGACACCAGCATTATCTGAG +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGTRGLP*TPALSE
Trigger: CTCAGATAATGCTGGTGTTCAAGGGAGCCCTCTTGT...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGCTGGTGGAGTGATCTaGACAGGTTCAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVAGGVI*TGSGAR
Trigger: CCTGGCCCCTGAACCTGTGCAGATCACTCCACCAGC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTGGTCTTCAGGGCCACTaGTATCCAATGAGACACCAT +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGGLQGH*YPMRHH
Trigger: ATGGTGTCTCATTGGATAGCAGTGGCCCTGAAGACC...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGACCCCTGGCATATCATaGCACCAACCTAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKTPGIS*HQPSSA
Trigger: CGCTGAGCTAGGTTGGTGGCATGATATGCCAGGGGT...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCTGGCCTCCTCAGTTGTaGAGAAGAGGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVWPPQL*RRGGPL
Trigger: GAGGGGACCGCCTCTTCTCCACAACTGAGGAGGCCA...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCGCGTGGAAGGCGGGTaGGCCGGCAGCTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSRVEGG*AGSCGL
Trigger: GAGGCCACAGCTGCCGGCCCACCCGCCTTCCACGCG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGCTGAAGCAAGGGCAATaGGAGACTGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKLKQGQ*ETVHWG
Trigger: CCCCCAATGGACAGTCTCCCATTGCCCTTGCTTCAG...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCTCCATGGCCTCACAGTaGCGTACCCAATGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTSMASQ*RTQCLQ
Trigger: CTGCAAACATTGGGTACGCCACTGTGAGGCCATGGA...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTGCAAGAGCCTCAGACTaGACAGGACTTCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGARASD*TGLPKL
Trigger: CAGTTTTGGAAGTCCTGTCCAGTCTGAGGCTCTTGC...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAACTCTGTTGACAGGCTaGAGTGCAATGGCGCTATCT +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGTLLTG*SAMALS
Trigger: AGATAGCGCCATTGCACTCCAGCCTGTCAACAGAGT...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGACATGGACAAGAGCTCTaGACTCCTTTAGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGHGQEL*TPLESP
Trigger: TGGGCTCTCTAAAGGAGTCCAGAGCTCTTGTCCATG...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACGCCAGAGTCCCACGGTaGCCAGCTGCTGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHARVPR*PAAGGS
Trigger: TGACCCTCCAGCAGCTGGGCACCGTGGGACTCTGGC...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGGGGGAATGAACAGCTaGTCCAGGCCCCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVGGMNS*SRPHLK
Trigger: TTTGAGGTGGGGCCTGGAGCAGCTGTTCATTCCCCC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTTTCTCGCCCCTCTTTaGGCGCCTGGCGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSFLAPL*APGAPP
Trigger: TGGCGGAGCGCCAGGCGCCCAAAGAGGGGCGAGAAA...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATGGGCCCAGGACTGCTaGGCACTGGGGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRWAQDC*ALGAGG
Trigger: TCCACCAGCCCCCAGTGCCCAGCAGTCCTGGGCCCA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGGGCCCAGGACTGCTaGGCACTGGGGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLWAQDC*ALGAGG
Trigger: TCCACCAGCCCCCAGTGCCCAGCAGTCCTGGGCCCA...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACACTGCCACCAAATGCCTaGGCCCAGGACTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTLPPNA*AQDCWA
Trigger: TGCCCAGCAGTCCTGGGCCCAGGCATTTGGTGGCAG...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCCAGTTTCCTGGGATACAATCATGCTTTGCCCTTGTCCTCAGTCCAAGTAAGAAGTCTCCCTGCCAGCTaGGGGCTTCAATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSFLGYNHALPLSSVQVRSLPAS*GLQCSW
Trigger: CCAGCTGCATTGAAGCCCCCAGCTGGCAGGGAGACT...TCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCTCCCCCACTGACCCCTaGCATATCATGCCACCAACC +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVSPTDP*HIMPPT
Trigger: GGTTGGTGGCATGATATGCCAGGGGTCAGTGGGGGA...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCCTTTCTTTGATGGGCTaGCTTCTCCATGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTLSLMG*LLHGFT
Trigger: AGTGAAGCCATGGAGAAGTCAGCCCATCAAAGAAAG...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGAGAACTGAGACCGGGTaGAAGATGAGGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKRTETG*KMRSSP
Trigger: TGGAGAAGACCTCATCTTTCACCCGGTCTCAGTTCT...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGGTTCCATGGCCAGAGTaGTGGGGATGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLVPWPE*WGWGLE
Trigger: CTCCAGGCCCCATCCCCATCACTCTGGCCATGGAAC...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCATTCCGTGCCTGGGCTTaGTGCCAGCGGAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPFRAWA*CQRRGR
Trigger: CCTACCCCTCCGCTGGCAGCAAGCCCAGGCACGGAA...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGCACCGGGTGCAGGATaGATAAGCAGAGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVAPGAG*ISRATS
Trigger: TGAAGTGGCTCTGCTTATGCATCCTGCACCCGGTGC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCCCTGCAGTTCTCCATTaGTATGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVPAVLH*YVASPG
Trigger: CCCAGGAGAGGCCACATAGCAATGGAGAACTGCAGG...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACACCTGGGCACTGTCCATaGAGGAACTGCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTPGHCP*RNCQSP
Trigger: GGGACTCTGGCAGTTCCTGCATGGACAGTGCCCAGG...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGTGGACTTTTCAGGTCTaGTATGGGAAGCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKWTFQV*YGKLWD
Trigger: GTCCCAGAGCTTCCCATAGCAGACCTGAAAAGTCCA...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGCTTTGCATGGAGGGATaGCAGAGGTATATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKLCMEG*QRYMVG
Trigger: ACCCACCATATACCTCTGGCATCCCTCCATGCAAAG...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCCTGCCACCAAATGCCTaGGCCCAGGACTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSLPPNA*AQDCWA
Trigger: TGCCCAGCAGTCCTGGGCCCAGGCATTTGGTGGCAG...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTGGCCTCGGGTCTCCATaGCCTCACAGTGGCGTACCC +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSGLGSP*PHSGVP
Trigger: GGGTACGCCACTGTGAGGCCATGGAGACCCGAGGCC...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTAGCTTCTGGGCCCACTaGCCTCGGGTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFSFWAH*PRVSMA
Trigger: GGCCATGGAGACCCGAGGCCAGTGGGCCCAGAAGCT...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGCCCCGGAAGAGACTCTaGAGGTCTGAACAACTACAA +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKPRKRL*RSEQLQ
Trigger: TTGTAGTTGTTCAGACCTCCAGAGTCTCTTCCGGGG...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAGTAGGCAGGCCCAAATaGACAGGGGGAAGGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTVGRPK*TGGRGL
Trigger: TAGCCCCCTTCCCCCTGTCCATTTGGGCCTGCCTAC...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCAGAAGCTTCCGTGCCTaGGCTTGCTGCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSRSFRA*ACCQRR
Trigger: CCTCCGCTGGCAGCAAGCCCAGGCACGGAAGCTTCT...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGCAGGACTTCCAAAACTaGCTGATGGTTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKQDFQN*LMVSAS
Trigger: GGAGGCTGAAACCATCAGCCAGTTTTGGAAGTCCTG...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCTTCTGCTCAGTTTCTTaGCCTGTAGGGACTCTACTG +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTFCSVS*PVGTLL
Trigger: CAGTAGAGTCCCTACAGGCCAAGAAACTGAGCAGAA...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCATGCAGCTGGTGAGCTaGAGGCTTGGGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVMQLVS*RLGFCS
Trigger: TGAGCAGAACCCAAGCCTCCAGCTCACCAGCTGCAT...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGAGCACCTCCACTCACTaGGGCTGCCACCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLSTSTH*GCHPLI
Trigger: GATGAGGGGGTGGCAGCCCCAGTGAGTGGAGGTGCT...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAGCGAAGGCCCACAGCTaGCCTGATGTGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTAKAHS*PDVASL
Trigger: AAGACTGGCCACATCAGGCCAGCTGTGGGCCTTCGC...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCAGATGGCTGAGCCACTaGTTTCAGAGCTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTRWLSH*FQSSKK
Trigger: CTTCTTTGAGCTCTGAAACCAGTGGCTCAGCCATCT...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGGGCAATTAGGCTTTTaGCCACAGCAGCACATTGAT +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTGQLGF*PQQHID
Trigger: ATCAATGTGCTGCTGTGGCCAAAAGCCTAATTGCCC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGGCTCCATTTGTGACATaGACAAGAGCTCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKAPFVT*TRALDS
Trigger: GGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGC...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAACCCTCTTTGGGCGCCTaGCGCTCCGCCACGATCCCA +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQPSLGA*RSATIP
Trigger: TGGGATCGTGGCGGAGCGCCAGGCGCCCAAAGAGGG...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGATATTCACTCTGTCCTaGAGCAAGGGCAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKIFTLS*SKGNGR
Trigger: TCTCCCATTGCCCTTGCTTCAGGACAGAGTGAATAT...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGCCAGGCTCTTTCTTTaGTGGGCTGACTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVARLFL*WADFSM
Trigger: CATGGAGAAGTCAGCCCATCAAAGAAAGAGCCTGGC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGATTCTCCATTTTGCTCTaGAATTCCATCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGFSILL*NSITSF
Trigger: GAAGCTGGTGATGGAATTTCAGAGCAAAATGGAGAA...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCGCTGGTGGAGTGATCTaGACAGGTTCAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSAGGVI*TGSGAR
Trigger: CCTGGCCCCTGAACCTGTGCAGATCACTCCACCAGC...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCATGCTGTTGCCCTGGCTaGCACCAAATGCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPCCCPG*HQMPGP
Trigger: GGGCCCAGGCATTTGGTGGCAGCCAGGGCAACAGCA...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCTTGCGGAAGGTAAGCTaGATGGCACCACCCATGAGT +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVLRKVS*MAPPMS
Trigger: ACTCATGGGTGGTGCCATGCAGCTTACCTTCCGCAA...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTCGTGCCTGGGCTTGCTaGCAGCGGAGGGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLRAWAC*QRRGRQ
Trigger: CTGCCTACCCCTCCGCTGGCAGCAAGCCCAGGCACG...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTCCCACGGTGCCCAGCTaGTGGAGGGTCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQAPTVPS*WRVSSS
Trigger: AGAGGAACTGACCCTCCAGCAGCTGGGCACCGTGGG...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCCCTGGGCACTGTCCATaGAGGAACTGCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSPGHCP*RNCQSP
Trigger: GGGACTCTGGCAGTTCCTGCATGGACAGTGCCCAGG...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAGATCTAACTCCCCTCTaGTTTCATCTTTGCAGGATA +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGDLTPL*FHLCRI
Trigger: TATCCTGCAAAGATGAAAGCAGAGGGGAGTTAGATC...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGGCCTCCTCAGTTGTaGAGAAGAGGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLWPPQL*RRGGPL
Trigger: GAGGGGACCGCCTCTTCTCCACAACTGAGGAGGCCA...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGGGCTGACTTCTCCATaGCTTCACTCAGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVGLTSP*LHSVTL
Trigger: CAGAGTCACTGAGTGAAGCCATGGAGAAGTCAGCCC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTCTGGGCACTGGGGGCTaGTGGAGTGATCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSLGTGG*WSDLHR
Trigger: CCTGTGCAGATCACTCCACCAGCCCCCAGTGCCCAG...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CCCAGTTTCCTGGGATACAATCATGCTTTGCCCTTGTCCTCAGTCCAAGTAAGATCCAAGGTGCCAGGGTaGTTTCAGACCCGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSFLGYNHALPLSSVQVRSKVPG*FQTRLF
Trigger: GAAGAGACGGGTCTGAAACCACCCTGGCACCTTGGA...TCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCGTAGGCAGGCCCAAATaGACAGGGGGAAGGGGGCTA +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSVGRPK*TGGRGL
Trigger: TAGCCCCCTTCCCCCTGTCCATTTGGGCCTGCCTAC...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTTCCCTGCCAGCTGCTaGGCAAGTGGACCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSFPASC*ASGPES
Trigger: GGACTCAGGTCCACTTGCCCAGCAGCTGGCAGGGAA...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCACAACATCTTGTGCATaGTGGAGGTCATTCGATCTC +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTTTSCA*WRSFDL
Trigger: GAGATCGAATGACCTCCACCATGCACAAGATGTTGT...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTTGGCCATGGGCTCCTTaGCTGGGGGCAGGGACAACA +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFWPWAP*LGAGTT
Trigger: TGTTGTCCCTGCCCCCAGCCAAGGAGCCCATGGCCA...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGCATCTGTCTTGGCCATaGGCTCCTTGGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLHLSWP*APWLGA
Trigger: TGCCCCCAGCCAAGGAGCCCATGGCCAAGACAGATG...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGATTTCTTTATCCTGGTTaGCATTGGCCAAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGFLYPG*HWPRLV
Trigger: AACAAGCCTTGGCCAATGCCAACCAGGATAAAGAAA...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCAACCATGAGGTGAAATaGCCCTACAGTGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTNHEVK*PYSVEK
Trigger: CTTCTCAACACTGTAGGGCCATTTCACCTCATGGTT...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTACCTTTCCTTCAGTATaGAAAGGTGAATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGTFPSV*KGEWSR
Trigger: TCTCGACCATTCACCTTTCCATACTGAAGGAAAGGT...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTGGGGTATGTGAGGGGTaGTGTTTATACCTTGTATAT +
Preference number: 4 (lower is better)
Translates to: KLWDMESLVALWVTEEVGGVCEG*CLYLVY
Trigger: ATATACAAGGTATAAACACCACCCCTCACATACCCC...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTCTCAAAGTACTGGCTaGGGCGGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSSQSTG*GGCCCC
Trigger: ACAGCAGCAGCAGCCGCCTCAGCCAGTACTTTGAGA...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGGTCCAGGCGGGAGATaGGCAGATGGTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPGPGGR*ADGRRT
Trigger: AGTCCTCCTACCATCTGCTCATCTCCCGCCTGGACC...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACACCAATGCAAGCTGTCTaGTTCTGCAGGGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTPMQAV*FCRGDP
Trigger: TGGGTCTCCCCTGCAGAATCAGACAGCTTGCATTGG...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCGAGGCTAGTGCTATCTaGGCCTGCAGAGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSEASAI*ACRVSI
Trigger: GATGCTGACTCTGCAGGCTCAGATAGCACTAGCCTC...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGCATCCTTGGTCATGTaGATAGCACTTGACAATTCT +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTASLVM*IALDNS
Trigger: AGAATTGTCAAGTGCTATTCACATGACCAAGGATGC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCAGACCGGGTGAAAGATaGGGTCTTCTCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSRPGER*GLLHWV
Trigger: CACCCAGTGGAGAAGACCTCATCTTTCACCCGGTCT...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGGATCTCCTGAACTCGTaGTCTCCCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTDLLNS*SPRLGL
Trigger: GAGGCCGAGGCGGGGAGATCACGAGTTCAGGAGATC...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGGCTGCTGCTGCTGTTaGTGTTGCCCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSGCCCC*CCPGCH
Trigger: GTGGCAGCCAGGGCAACAGCAACAGCAGCAGCAGCC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGGCTGCTGCTGCTGTTaGTGTTGCCCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQGCCCC*CCPGCH
Trigger: GTGGCAGCCAGGGCAACAGCAACAGCAGCAGCAGCC...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTTCCGTGCCTGGGCTTaGTGCCAGCGGAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPFRAWA*CQRRGR
Trigger: CCTACCCCTCCGCTGGCAGCAAGCCCAGGCACGGAA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACGTCAGTTCCTCTGCTTaGAGGGCCACAGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHVSSSA*RATVRS
Trigger: GGACCTGACTGTGGCCCTGCAAGCAGAGGAACTGAC...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTTGTCCATGCAGGAACTaGCAGAGTCCCACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQACPCRN*QSPTVP
Trigger: GGGCACCGTGGGACTCTGGCAGTTCCTGCATGGACA...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACGGGGGAATGAACAGCTaGTCCAGGCCCCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHGGMNS*SRPHLK
Trigger: TTTGAGGTGGGGCCTGGAGCAGCTGTTCATTCCCCC...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTTTCTCGCCCCTCTTTaGGCGCCTGGCGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPFLAPL*APGAPP
Trigger: TGGCGGAGCGCCAGGCGCCCAAAGAGGGGCGAGAAA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGCATCCAGCTCCAGGTTaGTCAGCTGACCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLHPAPG*SADPPL
Trigger: AAGGGGAGGGTCAGCTGACCAACCTGGAGCTGGATG...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGGCACTGGGGGCTGGTaGAGTGATCTGCACAGGTTC +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPGTGGW*SDLHRF
Trigger: GAACCTGTGCAGATCACTCCACCAGCCCCCAGTGCC...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCACTGGGCACTGGGGGCTaGTGGAGTGATCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPLGTGG*WSDLHR
Trigger: CCTGTGCAGATCACTCCACCAGCCCCCAGTGCCCAG...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTCCATCACCAGCTTCTaGGCCCACTGGCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASSITSF*AHWPRV
Trigger: GACCCGAGGCCAGTGGGCCCAGAAGCTGGTGATGGA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGAGAAGCTTCCGTGCCTaGGCTTGCTGCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTRSFRA*ACCQRR
Trigger: CCTCCGCTGGCAGCAAGCCCAGGCACGGAAGCTTCT...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAAGCCTCACGCGGACATaGGCCGGGGAATGTACAAGC +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRSLTRT*AGECTS
Trigger: GCTTGTACATTCCCCGGCCCATGTCCGCGTGAGGCT...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTAGCCTCACGCGGACATaGGCCGGGGAATGTACAAGC +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSSLTRT*AGECTS
Trigger: GCTTGTACATTCCCCGGCCCATGTCCGCGTGAGGCT...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGGGCTTGCTGGGCCCTaGTCTGATGAGGCATCAGAC +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPGLAGP*SDEASD
Trigger: GTCTGATGCCTCATCAGACCAGGGCCCAGCAAGCCC...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCATGGCCATGGGCTCCTTaGCTGGGGGCAGGGACAACA +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPWPWAP*LGAGTT
Trigger: TGTTGTCCCTGCCCCCAGCCAAGGAGCCCATGGCCA...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTCCCCCTCATCTGTCTTaGCCATGGGCTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQAPPHLS*PWAPWL
Trigger: CAGCCAAGGAGCCCATGGCCAAGACAGATGAGGGGG...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCCTGAAAGCATGTACCTaGGCACTGTCCATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVLKACT*ALSMQE
Trigger: TTCCTGCATGGACAGTGCCCAGGTACATGCTTTCAG...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGCGAAGGCCCACAGCTaGCCTGATGTGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPAKAHS*PDVASL
Trigger: AAGACTGGCCACATCAGGCCAGCTGTGGGCCTTCGC...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAGCCACTCAGCACAGCTaGGAAAGACAAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTATQHS*ERQAGL
Trigger: GAGTCCTGCTTGTCTTTCCCAGCTGTGCTGAGTGGC...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp AGGGCAAGCCCCAGTTTCCTGGGATACAATCATGCTTaGCCCTTGTCCTCAGTCCAAGTAAGAACAGCTAGT +
Preference number: 4 (lower is better)
Translates to: RASPSFLGYNHA*PLSSVQVRTAS
Trigger: ACTAGCTGTTCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGGGCTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCTCAGGGTGCTCAGGTTaGTTTTGTCTGGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVSGCSG*FCLGKD
Trigger: ATCTTTCCCCAGACAAAATCAACCTGAGCACCCTGA...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGCTGCCAGTTGGGGTTaGCACTATAGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFAASWG*HYSPGA
Trigger: AGCTCCAGGGCTATAGTGTCAACCCCAACTGGCAGC...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACGCCTCAATGGAGTGGTaGCTGGGTCCTGATCACCAT +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHASMEW*LGPDHH
Trigger: ATGGTGATCAGGACCCAGTCACCACTCCATTGAGGC...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGCATAGCCTTGAGCTGTaGGTCAGTCAGCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLHSLEL*VSQHPE
Trigger: CTCTGGGTGCTGACTGACTCACAGCTCAAGGCTATG...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTGGTGGCAATCATGCCTaGCGCAGAGAAGACAAGGGC +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSGGNHA*RREDKG
Trigger: GCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACC...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCATTAGTCAGCTGCTCCTaGAGCCTCTGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPLVSCS*SLCSTS
Trigger: GGAGGTGCTGCAGAGGCTTCAGGAGCAGCTGACTAA...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACCCAATGCAAGCTGTCTaGTTCTGCAGGGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHPMQAV*FCRGDP
Trigger: TGGGTCTCCCCTGCAGAATCAGACAGCTTGCATTGG...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACGAGGCTAGTGCTATCTaGGCCTGCAGAGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHEASAI*ACRVSI
Trigger: GATGCTGACTCTGCAGGCTCAGATAGCACTAGCCTC...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCCTGGGCAAGTGGACCTaGGTCCTGCAGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSLGKWT*VLQFSI
Trigger: AATGGAGAACTGCAGGACTCAGGTCCACTTGCCCAG...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGAGACCGGGTGAAAGATaGGGTCTTCTCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLRPGER*GLLHWV
Trigger: CACCCAGTGGAGAAGACCTCATCTTTCACCCGGTCT...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGCTGATGGTTTGTCCTaGGCAGCAGCGCCTATGTGG +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQAADGLS*AAAPMW
Trigger: CCACATAGGCGCTGCTGCTCAGGACAAACCATCAGC...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCTATACAGGCAAGACATaGTGCTTGTGCCACACACAG +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVYTGKT*CLCHTQ
Trigger: CTGTGTGTGGCACAAGCATCATGTCTTGCCTGTATA...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATTGGTGGCTCTGTGGGTaGCCGAGGAGGTGGGTACTT +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYWWLCG*PRRWVL
Trigger: AAGTACCCACCTCCTCGGTCACCCACAGAGCCACCA...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCCGAAGGTCACTCTGCTaGCAGTTGGGGTTGACACTA +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSRRSLC*QLGLTL
Trigger: TAGTGTCAACCCCAACTGGCAGCAGAGTGACCTTCG...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTGCTGTTGCCCTGGCTaGCACCAAATGCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPCCCPG*HQMPGP
Trigger: GGGCCCAGGCATTTGGTGGCAGCCAGGGCAACAGCA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCAGACCCGTCTCTTCATaGCACTTCTCCATTTTGCTC +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVRPVSS*HFSILL
Trigger: GAGCAAAATGGAGAAGTGGCATGAAGAGACGGGTCT...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTAGGGCCTGGGGACGATaGAACTCTGCCCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLRAWGR*NSARSL
Trigger: GAGAGAGCGGGCAGAGTTGCATCGTCCCCAGGCCCT...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTTCCACTCACTGGGGCTaGCACCCCCTCATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFSTHWG*HPLICL
Trigger: AAGACAGATGAGGGGGTGGCAGCCCCAGTGAGTGGA...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGAGGGTCAGTTCCTCTaGTTGCAGGGCCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPEGQFL*LQGHSQ
Trigger: CTGACTGTGGCCCTGCAAGCAGAGGAACTGACCCTC...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACATCCAGCTCCAGGTTaGTCAGCTGACCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRHPAPG*SADPPL
Trigger: AAGGGGAGGGTCAGCTGACCAACCTGGAGCTGGATG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTGGGAGACTGTCCATTaGGGGGCCGAGGATCCTCAC +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASWETVH*GAEDPH
Trigger: GTGAGGATCCTCGGCCCCCCAATGGACAGTCTCCCA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCCTGAAGCAAGGGCAATaGGAGACTGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSLKQGQ*ETVHWG
Trigger: CCCCCAATGGACAGTCTCCCATTGCCCTTGCTTCAG...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCATTTGGATCCTGCCTTaGTTCGTAATAAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTIWILP*FVISLN
Trigger: ATTGAGGCTTATTACGAACCAAGGCAGGATCCAAAT...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCTGTTGCTGTTGCCCTaGCTGCCACCAAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFLLLLP*LPPNAW
Trigger: CCAGGCATTTGGTGGCAGCCAGGGCAACAGCAACAG...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTTGGCAGAGACACCTaGCTCTCGGGACTGGCTATC +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPVGRDT*LSGLAI
Trigger: GATAGCCAGTCCCGAGAGCCAGGTGTCTCTGCCAAC...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGGGTTCTTTCGAGGACTaGAAAGAGAATCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKGSFED*KENLLF
Trigger: GAAAAGCAGATTCTCTTTCCAGTCCTCGAAAGAACC...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTGCGGTGGAAACCTGGTaGATGTCCAGGTCATCCACC +
Preference number: 4 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLAVETW*MSRSST
Trigger: GGTGGATGACCTGGACATCCACCAGGTTTCCACCGC...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTCCAGCGGTGGAAACCTaGTGGATGTCCAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSPAVET*WMSRSS
Trigger: GGATGACCTGGACATCCACCAGGTTTCCACCGCTGG...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CCCAGTTTCCTGGGATACAATCATGCTTTGCCCTTGTCCTCAGTCCAAGTAAGAGAGCATGACGTGTATTaGTGGCAATCATGCCTGACG +
Preference number: 4 (lower is better)
Translates to: PSFLGYNHALPLSSVQVREHDVY*WQSCLT
Trigger: CGTCAGGCATGATTGCCACCAATACACGTCATGCTC...TCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGGGGCTTGCTGGGCCCTaGTCTGATGAGGCATCAGAC +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTGLAGP*SDEASD
Trigger: GTCTGATGCCTCATCAGACCAGGGCCCAGCAAGCCC...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTAGTCTCCCTGCCAGCTaGGGGCTTCAATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASSLPAS*GLQCSW
Trigger: CCAGCTGCATTGAAGCCCCCAGCTGGCAGGGAGACT...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGACCATCCCATAGTAACTaGTGTTTCAAAAATTGCCTT +
Preference number: 4 (lower is better)
Translates to: QARHDACATHRASPSFLGPSHSN*CFKNCL
Trigger: AAGGCAATTTTTGAAACACCAGTTACTATGGGATGG...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCATGCAGTAGACCCGAGTaGTGGCTAACCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPCSRPE*WLTRWA
Trigger: TGCCCACCTGGTTAGCCATCACTCGGGTCTACTGCA...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCAGGTGGCAATCATGCCTaGCGCAGAGAAGACAAGGGC +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPGGNHA*RREDKG
Trigger: GCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACC...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTTTTCAGCCTCCCCTCTaGGGCCAAAAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSFQPPL*GQKKLP
Trigger: CGGAAGCTTCTTTTGGCCTCAGAGGGGAGGCTGAAA...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAGTCATGTTCAGTCTTTaGCCGCGGATGGGACATAGA +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTVMFSL*PRMGHR
Trigger: TCTATGTCCCATCCGCGGTCAAAGACTGAACATGAC...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGTCCCTTCTTAGACAATaGGCTCCTTACATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKSLLRQ*APYISD
Trigger: ATCAGAAATGTAAGGAGCTCATTGTCTAAGAAGGGA...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCAGAGCAGCCATCATGTaGATAGAACCCACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVRAAIM*IEPTCF
Trigger: AAAACAGGTGGGTTCTATTCACATGATGGCTGCTCT...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGAGTCTACTCCAAGGTaGCAGGGTGGTTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQAESTPR*QGGFRP
Trigger: GGGTCTGAAACCACCCTGGCACCTTGGAGTAGACTC...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCATCCACTCACTGGGGCTaGCACCCCCTCATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPSTHWG*HPLICL
Trigger: AAGACAGATGAGGGGGTGGCAGCCCCAGTGAGTGGA...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGGAGGGTCAGTTCCTCTaGTTGCAGGGCCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTEGQFL*LQGHSQ
Trigger: CTGACTGTGGCCCTGCAAGCAGAGGAACTGACCCTC...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTTCAGAAGCTCAATCTaGATGGGGACTACCACCGGG +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLFRSSI*MGTTTG
Trigger: CCCGGTGGTAGTCCCCATGCAGATTGAGCTTCTGAA...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAGGAGGTGGGTACTTTTaGTTGTTCACACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTGGGYF*LFTQAC
Trigger: ACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCC...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTTCCACTGGATCCGGATaGAGGCCCTGTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSSTGSG*RPCCSR
Trigger: TCTACTGCAACAGGGCCTCCATCCGGATCCAGTGGA...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACGGGCTGACTTCTCCATaGCTTCACTCAGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHGLTSP*LHSVTL
Trigger: CAGAGTCACTGAGTGAAGCCATGGAGAAGTCAGCCC...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCAATTTCTCAAAGTACTaGCTGAGGCGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSNFSKY*LRRLLL
Trigger: CAGCAGCAGCCGCCTCAGCCAGTACTTTGAGAAATT...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGGTTGGCAGAGACACCTaGCTCTCGGGACTGGCTATC +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTVGRDT*LSGLAI
Trigger: GATAGCCAGTCCCGAGAGCCAGGTGTCTCTGCCAAC...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACACATGACGTGTATTGGTaGCAATCATGCCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTHDVYW*QSCLTQ
Trigger: CTGCGTCAGGCATGATTGCCACCAATACACGTCATG...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTGAAGCCTTAGGTCTCTaGGGAGGGAGGGTATTAGGC +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSEALGL*GGRVLG
Trigger: GCCTAATACCCTCCCTCCCCAGAGACCTAAGGCTTC...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTGTCTTTGACCGCGGATaGGACATAGAGTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLVFDRG*DIESGA
Trigger: TGCCCCTGACTCTATGTCCCATCCGCGGTCAAAGAC...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTTCCCTGCCAGCTGCTaGGCAAGTGGACCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPFPASC*ASGPES
Trigger: GGACTCAGGTCCACTTGCCCAGCAGCTGGCAGGGAA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAATGCAGCTGGTGAGCTaGAGGCTTGGGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPMQLVS*RLGFCS
Trigger: TGAGCAGAACCCAAGCCTCCAGCTCACCAGCTGCAT...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCCCCCCTCATCTGTCTTaGCCATGGGCTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPPPHLS*PWAPWL
Trigger: CAGCCAAGGAGCCCATGGCCAAGACAGATGAGGGGG...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCCAGTTTCCTGGGATACAATCATGCTTTGCCCTTGTCCTCAGTCCAAGTAAGATGGTGGAACAGATTCTaGACCAGACTCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: PSFLGYNHALPLSSVQVRWWNRF*TRLRLQ
Trigger: TTGGAGTCTGAGTCTGGTCCAGAATCTGTTCCACCA...TCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGTGGTGACTGGGTCCTaGTCACCATTGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFVVTGS*SPLSVA
Trigger: TGCTACAGACAATGGTGATCAGGACCCAGTCACCAC...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGCATAGCCTTGAGCTGTaGGTCAGTCAGCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTHSLEL*VSQHPE
Trigger: CTCTGGGTGCTGACTGACTCACAGCTCAAGGCTATG...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACGAGACTCTGGAGGTCTaGACAACTACAATGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHETLEV*TTTMWS
Trigger: GCTCCACATTGTAGTTGTTCAGACCTCCAGAGTCTC...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGGGAGGGTATTAGGCTaGGGCAGGCAGGAATCCATC +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPGRVLG*GRQESI
Trigger: GATGGATTCCTGCCTGCCTCAGCCTAATACCCTCCC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTGGGAGGGTATTAGGCTaGGGCAGGCAGGAATCCATC +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLGRVLG*GRQESI
Trigger: GATGGATTCCTGCCTGCCTCAGCCTAATACCCTCCC...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCACTGGGCAAGTGGACCTaGGTCCTGCAGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPLGKWT*VLQFSI
Trigger: AATGGAGAACTGCAGGACTCAGGTCCACTTGCCCAG...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGTTCTTCAAGGGGATaGGCTCACCCTGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSCSSRG*AHPVHS
Trigger: TGAATGGACAGGGTGAGCTCATCCCCTTGAAGAACA...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTACACAGCTTCCTTGGTaGGGTCCATGGTGGCATGTA +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQATQLPW*GPWWHV
Trigger: TACATGCCACCATGGACCTCACCAAGGAAGCTGTGT...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGACAAGAGGGCTCCCTTaGACACCAGCATTATCTGAG +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLTRGLP*TPALSE
Trigger: CTCAGATAATGCTGGTGTTCAAGGGAGCCCTCTTGT...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCTTCAGGACCAGAACTaGGACCGGGTGAAAGATGAG +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFLQDQN*DRVKDE
Trigger: CTCATCTTTCACCCGGTCTCAGTTCTGGTCCTGAAG...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCAAAGTTGAGGATTCCTaGAAGCATGTACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSKVEDS*KHVPGH
Trigger: GTGCCCAGGTACATGCTTTCAGGAATCCTCAACTTT...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCTTGGCACAGATGGCTaGGCCACTGGTTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSLGTDG*ATGFRA
Trigger: AGCTCTGAAACCAGTGGCTCAGCCATCTGTGCCAAG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACCTGCCATGAAACCATaGGGTGAAATGGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRPAMKP*GEMALQ
Trigger: CTGTAGGGCCATTTCACCTCATGGTTTCATGGCAGG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACACAAATGTCCCTGCCATaGAACCATGAGGTGAAATGG +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTQMSLP*NHEVKW
Trigger: CCATTTCACCTCATGGTTTCATGGCAGGGACATTTG...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAACAGGGCAGTATGAATaGAGGGATGGTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTTGQYE*RDGVGE
Trigger: TTCTCCAACACCATCCCTTCATTCATACTGCCCTGT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCCACCTGTCAGTTTTCTaGGTATTCTCAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSHLSVF*VFSALL
Trigger: AAGCAGGGCTGAGAATACTCAGAAAACTGACAGGTG...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCGCCATACTTGACCAGTaGTCCATTCAGATCAACATT +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVAILDQ*SIQINI
Trigger: AATGTTGATCTGAATGGATCACTGGTCAAGTATGGC...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CCCAGTTTCCTGGGATACAATCATGCTTTGCCCTTGTCCTCAGTCCAAGTAAGAAGGCCCATGGCAAAATaGGGGTCAGGTGAAATATAT +
Preference number: 4 (lower is better)
Translates to: PSFLGYNHALPLSSVQVRRPMAK*GSGEIY
Trigger: ATATATTTCACCTGACCCTCATTTTGCCATGGGCCT...TCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCGTGCTTCTTTCAAGCTaGTCCAGTCCATCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSVLLSS*SSPSLA
Trigger: TGCCAGTGATGGACTGGATCAGCTTGAAAGAAGCAC...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTAGGCGAAGGTCACTCTaGTGCCAGTTGGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASRRRSL*CQLGLT
Trigger: TGTCAACCCCAACTGGCAGCAGAGTGACCTTCGCCT...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTGCTGCTGTTGCTGTTaGCCTGGCTGCCACCAAATG +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASCCCCC*PGCHQM
Trigger: CATTTGGTGGCAGCCAGGGCAACAGCAACAGCAGCA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGGGACGATGCAACTCTaGCCGCTCTCTCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSGTMQL*PLSLFQ
Trigger: CTGGAAAAGAGAGAGCGGGCAGAGTTGCATCGTCCC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTGGGACGATGCAACTCTaGCCGCTCTCTCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASGTMQL*PLSLFQ
Trigger: CTGGAAAAGAGAGAGCGGGCAGAGTTGCATCGTCCC...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAATCGACAGCACCGGGTaGAGGATGCATAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQIDSTG*RMHKQS
Trigger: GCTCTGCTTATGCATCCTGCACCCGGTGCTGTCGAT...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCCTGCAGTTCTCCATTaGTATGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASPAVLH*YVASPG
Trigger: CCCAGGAGAGGCCACATAGCAATGGAGAACTGCAGG...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAAGTGGACCTGAGTCCTaGAGTTCTCCATTGCTATGT +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTSGPES*SSPLLC
Trigger: ACATAGCAATGGAGAACTGCAGGACTCAGGTCCACT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAAGGGACAACATCTTGTaGATGGTGGAGGTCATTCGA +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTRDNIL*MVEVIR
Trigger: TCGAATGACCTCCACCATGCACAAGATGTTGTCCCT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATCCCCCACACTCCTCTaGTGGACTATTTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRSPTLL*WTISCS
Trigger: GGAACAGGAAATAGTCCAGCAGAGGAGTGTGGGGGA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGTTCAAGCGATTCTCCTaGTTCAGCCTCCCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTFKRFS*FSLPSG
Trigger: GCCACTCGGGAGGCTGAAGCAGGAGAATCGCTTGAA...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCTGGTTTTGTATAAAGTaGTGTTCTCTGTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTWFCIK*CSLLSP
Trigger: TGGAGATAACAGAGAACAGCACTTTATACAAAACCA...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTTCCACTGGATCCGGATaGAGGCCCTGTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSSTGSG*RPCCSR
Trigger: TCTACTGCAACAGGGCCTCCATCCGGATCCAGTGGA...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCCAATGGAGTGGTGACTaGGTCCTGATCACCATTGTC +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSQWSGD*VLITIV
Trigger: GACAATGGTGATCAGGACCCAGTCACCACTCCATTG...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACCTGGCTCTCGGGACTaGCTATCATCACAAATGTGC +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRPGSRD*LSSQMC
Trigger: GCACATTTGTGATGATAGCCAGTCCCGAGAGCCAGG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTCCTGGCTCTCGGGACTaGCTATCATCACAAATGTGC +
Preference number: 4 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLPGSRD*LSSQMC
Trigger: GCACATTTGTGATGATAGCCAGTCCCGAGAGCCAGG...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTTCCATGGCCTCACAGTaGCGTACCCAATGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFSMASQ*RTQCLQ
Trigger: CTGCAAACATTGGGTACGCCACTGTGAGGCCATGGA...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGTTGGCTGTCCAGCGGTaGAAACCTGGTGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTLAVQR*KPGGCP
Trigger: TGGACATCCACCAGGTTTCCACCGCTGGACAGCCAA...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAATTGGCTGTCCAGCGGTaGAAACCTGGTGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQLAVQR*KPGGCP
Trigger: TGGACATCCACCAGGTTTCCACCGCTGGACAGCCAA...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTGAGAAGACAAGGGCCTaGGGACGATGCAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLEKTRA*GRCNSA
Trigger: GGCAGAGTTGCATCGTCCCCAGGCCCTTGTCTTCTC...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACCATGACGTGTATTGGTaGCAATCATGCCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHHDVYW*QSCLTQ
Trigger: CTGCGTCAGGCATGATTGCCACCAATACACGTCATG...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGCCCCGGAAGAGACTCTaGAGGTCTGAACAACTACAA +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLPRKRL*RSEQLQ
Trigger: TTGTAGTTGTTCAGACCTCCAGAGTCTCTTCCGGGG...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAAAGTGATCATAATTaGAATGAAAGAACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VCYGKLWDMESLVALWVTESDHN*NERTQQ
Trigger: CTGCTGAGTTCTTTCATTCCAATTATGATCACTTTC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATGAAGCCTTAGGTCTCTaGGGAGGGAGGGTATTAGGC +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYEALGL*GGRVLG
Trigger: GCCTAATACCCTCCCTCCCCAGAGACCTAAGGCTTC...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CCCAGTTTCCTGGGATACAATCATGCTTTGCCCTTGTCCTCAGTCCAAGTAAGAATACCGTCCTCTTCATaGAGAAAAATCGGAGTCGTG +
Preference number: 4 (lower is better)
Translates to: PSFLGYNHALPLSSVQVRIPSSS*RKIGVV
Trigger: CACGACTCCGATTTTTCTCCATGAAGAGGACGGTAT...TCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGAAGCTCAATCTGCATaGGGACTACCACCGGGATCT +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFEAQSA*GLPPGS
Trigger: AGATCCCGGTGGTAGTCCCCATGCAGATTGAGCTTC...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGCAGCAGCGCCTATGTaGAACACACCATCATCACTC +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFAAAPM*NTPSSL
Trigger: GAGTGATGATGGTGTGTTCCACATAGGCGCTGCTGC...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATGATAGCCTCTCTCCTTaGCACAGATGGCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYDSLSP*HRWLSH
Trigger: GTGGCTCAGCCATCTGTGCCAAGGAGAGAGGCTATC...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCCAAGCCCCAGTTTCCTaGGATACAATCATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSQAPVS*DTIMLC
Trigger: GCAAAGCATGATTGTATCCCAGGAAACTGGGGCTTG...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACATGCTATGGGAAGCTCTaGGACATGGAATCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTCYGKL*DMESLV
Trigger: CACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCA...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGCCAGAGGTATATGGTaGGTGAGGGGAGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSARGIW*VRGGRD
Trigger: ATCCCTTCCTCCCCTCACCCACCATATACCTCTGGC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp AAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTaGTATATTCCACACACGGGAGCCAGTCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KLQGYVRGGVYT*YIPHTGASPFR
Trigger: TCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTCAGGGTGCTCAGGTTaGTTTTGTCTGGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLSGCSG*FCLGKD
Trigger: ATCTTTCCCCAGACAAAATCAACCTGAGCACCCTGA...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGATATTCACTCTGTCCTaGAGCAAGGGCAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLIFTLS*SKGNGR
Trigger: TCTCCCATTGCCCTTGCTTCAGGACAGAGTGAATAT...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGGTGGTGACTGGGTCCTaGTCACCATTGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTVVTGS*SPLSVA
Trigger: TGCTACAGACAATGGTGATCAGGACCCAGTCACCAC...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCCAGGCTCTTTCTTTaGTGGGCTGACTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQARLFL*WADFSM
Trigger: CATGGAGAAGTCAGCCCATCAAAGAAAGAGCCTGGC...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAATGGGTAGGGAGGTTGTaGAGTTTCCGACTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQWVGRL*SFRLQE
Trigger: TTCCTGCAGTCGGAAACTTCACAACCTCCCTACCCA...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGTCATGTTCAGTCTTTaGCCGCGGATGGGACATAGA +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFVMFSL*PRMGHR
Trigger: TCTATGTCCCATCCGCGGTCAAAGACTGAACATGAC...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTACTGTTGGCTGCTGGTaGCCCCTGGCCATAATTATT +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSTVGCW*PLAIII
Trigger: AATAATTATGGCCAGGGGTCACCAGCAGCCAACAGT...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTAGCTGATGGTTTGTCCTaGGCAGCAGCGCCTATGTGG +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLADGLS*AAAPMW
Trigger: CCACATAGGCGCTGCTGCTCAGGACAAACCATCAGC...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCAGGCGAAGGTCACTCTaGTGCCAGTTGGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPRRRSL*CQLGLT
Trigger: TGTCAACCCCAACTGGCAGCAGAGTGACCTTCGCCT...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CCCAGTTTCCTGGGATACAATCATGCTTTGCCCTTGTCCTCAGTCCAAGTAAGAATTGTCTGTAGCATCTaGCTCAATTCGGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PSFLGYNHALPLSSVQVRIVCSI*LNSECL
Trigger: CAAACACTCCGAATTGAGGCAGATGCTACAGACAAT...TCTTACTTGGACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGGAAACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTGCTGCTGTTGCTGTTaGCCTGGCTGCCACCAAATG +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPCCCCC*PGCHQM
Trigger: CATTTGGTGGCAGCCAGGGCAACAGCAACAGCAGCA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTTGCGGAAGGTAAGCTaGATGGCACCACCCATGAGT +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASLRKVS*MAPPMS
Trigger: ACTCATGGGTGGTGCCATGCAGCTTACCTTCCGCAA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAGGCGTACCCAATGTTTaGAGCTATCACCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRGVPNV*SYHLPN
Trigger: ATTGGGCAGGTGATAGCTGCAAACATTGGGTACGCC...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGAGTCTACTCCAAGGTaGCAGGGTGGTTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPESTPR*QGGFRP
Trigger: GGGTCTGAAACCACCCTGGCACCTTGGAGTAGACTC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTGCACCGGGTGCAGGATaGATAAGCAGAGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLAPGAG*ISRATS
Trigger: TGAAGTGGCTCTGCTTATGCATCCTGCACCCGGTGC...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCCATCCTGATTTTCAATaGTACTTTCCTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVHPDFQ*YFPPRP
Trigger: AGGTCTTGGAGGAAAGTAGCATTGAAAATCAGGATG...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACAGTGGACCTGAGTCCTaGAGTTCTCCATTGCTATGT +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHSGPES*SSPLLC
Trigger: ACATAGCAATGGAGAACTGCAGGACTCAGGTCCACT...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTGAAAAATCGGAGTCGTaGAGCACCTCCACTCACTGG +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASEKSES*STSTHW
Trigger: CCAGTGAGTGGAGGTGCTGCACGACTCCGATTTTTC...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTGGTCTTCAGGGCCACTaGTATCCAATGAGACACCAT +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSGLQGH*YPMRHH
Trigger: ATGGTGTCTCATTGGATAGCAGTGGCCCTGAAGACC...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTTTCAGAAGCTCAATCTaGATGGGGACTACCACCGGG +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSFRSSI*MGTTTG
Trigger: CCCGGTGGTAGTCCCCATGCAGATTGAGCTTCTGAA...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCCACAATGGCCAAAGCTaGCACATAAGGAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSHNGQS*HIRKDR
Trigger: TCTGTCTTTCCTTATGTGGCAGCTTTGGCCATTGTG...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTCGTAATAAGCCTCAATaGAGTGGTGACTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLRNKPQ*SGDWVL
Trigger: CAGGACCCAGTCACCACTCCATTGAGGCTTATTACG...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTAATTTCTCAAAGTACTaGCTGAGGCGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFNFSKY*LRRLLL
Trigger: CAGCAGCAGCCGCCTCAGCCAGTACTTTGAGAAATT...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTTCCAAGGTGCCAGGGTaGTTTCAGACCCGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLSKVPG*FQTRLF
Trigger: GAAGAGACGGGTCTGAAACCACCCTGGCACCTTGGA...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAAAGGCTAAAGCCACCTaGAACCTTAGGAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTKAKAT*NLRKVI
Trigger: GATCACTTTCCTAAGGTTCCAGGTGGCTTTAGCCTT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAGAGATCTGGGTAAAGTaGACAGACCAGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFREIWVK*TDQRSQ
Trigger: CTGGGATCTCTGGTCTGTCCACTTTACCCAGATCTC...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGAGATCTGGGTAAAGTaGACAGACCAGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFEIWVK*TDQRSQ
Trigger: CTGGGATCTCTGGTCTGTCCACTTTACCCAGATCTC...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCAAGTCCAAGGAGATCTaGGTAAAGTGGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSKSKEI*VKWTDQ
Trigger: CTGGTCTGTCCACTTTACCCAGATCTCCTTGGACTT...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGTCTTTGACCGCGGATaGGACATAGAGTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPVFDRG*DIESGA
Trigger: TGCCCCTGACTCTATGTCCCATCCGCGGTCAAAGAC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTTCTCCATTGCTATGTaGCCTCTCCTGGGATACATC +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLFSIAM*PLLGYI
Trigger: GATGTATCCCAGGAGAGGCCACATAGCAATGGAGAA...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGTAGAGCCTCCTTGGTaGCATCCTTGGTCATGTGAA +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFVEPPW*HPWSCE
Trigger: TTCACATGACCAAGGATGCCACCAAGGAGGCTCTAC...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTCATGTAGAGCCTCCTTaGTGGCATCCTTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLHVEPP*WHPWSC
Trigger: ACATGACCAAGGATGCCACCAAGGAGGCTCTACATG...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGGAAGCTCAATCTGCATaGGGACTACCACCGGGATCT +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTEAQSA*GLPPGS
Trigger: AGATCCCGGTGGTAGTCCCCATGCAGATTGAGCTTC...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCAGCAGCAGCGCCTATGTaGAACACACCATCATCACTC +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPAAAPM*NTPSSL
Trigger: GAGTGATGATGGTGTGTTCCACATAGGCGCTGCTGC...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGTCTCCTTGGCACAGATaGCTGAGCCACTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTSPWHR*LSHWFQ
Trigger: CTGAAACCAGTGGCTCAGCCATCTGTGCCAAGGAGA...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACACCAAAGCTCAGGTCATaGACTTTTCAGGTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTPKLRS*TFQVCY
Trigger: ATAGCAGACCTGAAAAGTCCATGACCTGAGCTTTGG...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp AAATCCCAAGTCTGGCCACTTAGCAAAGCCTCATTGTaGAAGGTTATCCAAGAGTGTTTCCCCTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KSQVWPLSKASL*KVIQECFPLCH
Trigger: ATGGCACAAGGGGAAACACTCTTGGATAACCTTCAACAATGAGGCTTTGCTAAGTGGCCAGACTTGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp ATCAAATCCCAAGTCTGGCCACTTAGCAAAGCCTCATaGTTGAAGGTTATCCAAGAGTGTTTCCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: IKSQVWPLSKAS*LKVIQECFPLC
Trigger: GCACAAGGGGAAACACTCTTGGATAACCTTCAACAATGAGGCTTTGCTAAGTGGCCAGACTTGGGATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp CTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTaGAAGCTGTTCTCTCGTGAAGCTTTCCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: LSSLPFSVIGRI*KLFSREAFLSM
Trigger: CATGCTCAGGAAAGCTTCACGAGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTCTTTCTTTGATGGGCTaGCTTCTCCATGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSLSLMG*LLHGFT
Trigger: AGTGAAGCCATGGAGAAGTCAGCCCATCAAAGAAAG...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCTACAATGTGGAGCATaGCGTGTATTGGTGGCAATC +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFLQCGA*RVLVAI
Trigger: GATTGCCACCAATACACGTCATGCTCCACATTGTAG...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCAGAGACTCTGGAGGTCTaGACAACTACAATGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPETLEV*TTTMWS
Trigger: GCTCCACATTGTAGTTGTTCAGACCTCCAGAGTCTC...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACATCAAGGTATGGCCTTTaGAGTTTTCTGTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTSRYGL*SFLFPQ
Trigger: TTGAGGGAACAGAAAACTTCAAAGGCCATACCTTGA...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGGGAGACCCAGTCATTaGCTCTGTATCCTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQGRPSH*LCILSQ
Trigger: CTGACTAAGGATACAGAGTCAATGACTGGGTCTCCC...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTTGTTCTTCAAGGGGATaGGCTCACCCTGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSCSSRG*AHPVHS
Trigger: TGAATGGACAGGGTGAGCTCATCCCCTTGAAGAACA...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGACTGTTGGCTGCTGGTaGCCCCTGGCCATAATTATT +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTTVGCW*PLAIII
Trigger: AATAATTATGGCCAGGGGTCACCAGCAGCCAACAGT...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTAGAACTGAGACCGGGTaGAAGATGAGGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASRTETG*KMRSSP
Trigger: TGGAGAAGACCTCATCTTTCACCCGGTCTCAGTTCT...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCCTTCAGGACCAGAACTaGGACCGGGTGAAAGATGAG +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPLQDQN*DRVKDE
Trigger: CTCATCTTTCACCCGGTCTCAGTTCTGGTCCTGAAG...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTAAAGTTGAGGATTCCTaGAAGCATGTACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQAKVEDS*KHVPGH
Trigger: GTGCCCAGGTACATGCTTTCAGGAATCCTCAACTTT...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGGCCAGTCTTCAAAGTTaGGGATTCCTGAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLASLQS*GFLKAC
Trigger: ACATGCTTTCAGGAATCCTCAACTTTGAAGACTGGC...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTCGAAGGTCACTCTGCTaGCAGTTGGGGTTGACACTA +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLRRSLC*QLGLTL
Trigger: TAGTGTCAACCCCAACTGGCAGCAGAGTGACCTTCG...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCTATCATCACAAATGTaGAGGTCCAGGCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSLSSQM*RSRREM
Trigger: CATCTCCCGCCTGGACCTGCACATTTGTGATGATAG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTGGCGTACCCAATGTTTaGAGCTATCACCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASGVPNV*SYHLPN
Trigger: ATTGGGCAGGTGATAGCTGCAAACATTGGGTACGCC...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTAGGGACAACATCTTGTaGATGGTGGAGGTCATTCGA +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQARDNIL*MVEVIR
Trigger: TCGAATGACCTCCACCATGCACAAGATGTTGTCCCT...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGAAAAATCGGAGTCGTaGAGCACCTCCACTCACTGG +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPEKSES*STSTHW
Trigger: CCAGTGAGTGGAGGTGCTGCACGACTCCGATTTTTC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCACAATGGAGTGGTGACTaGGTCCTGATCACCATTGTC +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPQWSGD*VLITIV
Trigger: GACAATGGTGATCAGGACCCAGTCACCACTCCATTG...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGCGTAATAAGCCTCAATaGAGTGGTGACTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTRNKPQ*SGDWVL
Trigger: CAGGACCCAGTCACCACTCCATTGAGGCTTATTACG...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGCTTTTGAGGGCTATTTaGATCCTGCCTTGGTTCGTA +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLLLRAI*ILPWFV
Trigger: TACGAACCAAGGCAGGATCCAAATAGCCCTCAAAAG...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACGGAAAGGAGTGTAGATaGCTTTTTACTTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHGKECR*LFTWLS
Trigger: GGACAGCCAAGTAAAAAGCCATCTACACTCCTTTCC...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTGAGCATGACGTGTATTaGTGGCAATCATGCCTGACG +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASEHDVY*WQSCLT
Trigger: CGTCAGGCATGATTGCCACCAATACACGTCATGCTC...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCAAGAGCCTCAGACTaGACAGGACTTCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQARASD*TGLPKL
Trigger: CAGTTTTGGAAGTCCTGTCCAGTCTGAGGCTCTTGC...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGTAGAGCCTCCTTGGTaGCATCCTTGGTCATGTGAA +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSVEPPW*HPWSCE
Trigger: TTCACATGACCAAGGATGCCACCAAGGAGGCTCTAC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGACAACATCTTGTGCATaGTGGAGGTCATTCGATCTC +
Preference number: 4 (lower is better)
Translates to: LGTVFQSQSLTIVITESLTTSCA*WRSFDL
Trigger: GAGATCGAATGACCTCCACCATGCACAAGATGTTGT...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCAGTTTTTCTTTATCCTaGTTGGCATTGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSSFSLS*LALAKA
Trigger: AGCCTTGGCCAATGCCAACCAGGATAAAGAAAAACT...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATGGAAGCTCTGGGACATaGAATCTTTGGTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYGSSGT*NLWWLC
Trigger: ACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCC...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGTAAGGTCACAGAGCTaGGAAAGCAGATGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPVRSQS*ESRCAR
Trigger: CCTGGCACATCTGCTTTCCCAGCTCTGTGACCTTAC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAATTTTGGCTGTTCTCTaGACCTTTCCTCCCTTTATC +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTILAVL*TFPPFI
Trigger: GATAAAGGGAGGAAAGGTCCAGAGAACAGCCAAAAT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGGAAGGCCTTGGAGTaGATCTTGATGGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLWKALE*ILMVIE
Trigger: TTCTATCACCATCAAGATTCACTCCAAGGCCTTCCA...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCATGGCTTCACTCAGTaGCTCTGCATACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFHGFTQ*LCILHH
Trigger: ATGATGAAGTATGCAGAGTCACTGAGTGAAGCCATG...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCGGAAGTAATACTCTGTaGACTCAATATGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSGSNTL*TQYEWQ
Trigger: CTGCCATTCATATTGAGTTCACAGAGTATTACTTCC...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCTACAATGTGGAGCATaGCGTGTATTGGTGGCAATC +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSLQCGA*RVLVAI
Trigger: GATTGCCACCAATACACGTCATGCTCCACATTGTAG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCCATGTGAATAGCACTTaGCAATTCTCCCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSHVNST*QFSLNV
Trigger: AACATTGAGGGAGAATTGTCAAGTGCTATTCACATG...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTTATCATCCTTTAGGGTaGTGCTGGAGTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSYHPLG*CWSSEA
Trigger: AGCTTCTGAACTCCAGCATCACCCTAAAGGATGATA...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATTTAAGTACTTCAGCTaGTGGTTTGTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRFKYFS*WFVLSS
Trigger: GCTGCTCAGGACAAACCATCAGCTGAAGTACTTAAA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGCATGAAACCATGAGGTaGAATGGCCCTACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTHETMR*NGPTVL
Trigger: CAACACTGTAGGGCCATTTCACCTCATGGTTTCATG...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCAGGGGAAAGATTAAATaGCTGAGCCACTACTGTTAT +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSRGKIK*LSHYCY
Trigger: ATAACAGTAGTGGCTCAGTCATTTAATCTTTCCCCT...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCCTAAGGCTCCATTTGTaGCATGGACAAGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPLRLHL*HGQELW
Trigger: CCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAG...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGCAGTCCAAAAGGGCTaGCACTGCTACTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSAVQKG*HCYFFL
Trigger: AAGGAAAAAGTAGCAGTGTCAGCCCTTTTGGACTGC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGAGCACACATAAAGGTTaGGGCCCATGGCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTSTHKG*GPWQNE
Trigger: CTCATTTTGCCATGGGCCTCAACCTTTATGTGTGCT...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGAGTTACAGGGGTATGTaGGGGGTGGTGTTTATACCT +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTSYRGM*GVVFIP
Trigger: AGGTATAAACACCACCCCTCACATACCCCTGTAACT...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTCTATCATCACAAATGTaGAGGTCCAGGCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLLSSQM*RSRREM
Trigger: CATCTCCCGCCTGGACCTGCACATTTGTGATGATAG...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTAGACCCGTCTCTTCATaGCACTTCTCCATTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASRPVSS*HFSILL
Trigger: GAGCAAAATGGAGAAGTGGCATGAAGAGACGGGTCT...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCACCTGGGATACAATCATaGTTTGCCCTTGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPPGIQS*FALVLS
Trigger: ACTGAGGACAAGGGCAAAGCATGATTGTATCCCAGG...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCCTCTGCTTTCATCTTTaGAGGATAGAGTCTATATTT +
Preference number: 4 (lower is better)
Translates to: EEVGTFACSHRPVKEANVLCFHL*RIESIF
Trigger: AAATATAGACTCTATCCTGCAAAGATGAAAGCAGAG...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGTCCATCACATTAGGACAAGGAACTaGAAGCTCCTGATTATCTGG +
Preference number: 4 (lower is better)
Translates to: TIVITESLCFFQADPVHHIRTRN*KLLIIW
Trigger: CCAGATAATCAGGAGCTTCCAGTTCCTTGTCCTAAT...GTGATGGACTGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTAAGGCTAAAGCCACCTaGAACCTTAGGAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFKAKAT*NLRKVI
Trigger: GATCACTTTCCTAAGGTTCCAGGTGGCTTTAGCCTT...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCAAAGTCCAAGGAGATCTaGGTAAAGTGGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPKSKEI*VKWTDQ
Trigger: CTGGTCTGTCCACTTTACCCAGATCTCCTTGGACTT...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTCAGGACTTCCAAAACTaGCTGATGGTTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLQDFQN*LMVSAS
Trigger: GGAGGCTGAAACCATCAGCCAGTTTTGGAAGTCCTG...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTTTCTCCATTGCTATGTaGCCTCTCCTGGGATACATC +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSFSIAM*PLLGYI
Trigger: GATGTATCCCAGGAGAGGCCACATAGCAATGGAGAA...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTTCTGCTCAGTTTCTTaGCCTGTAGGGACTCTACTG +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASFCSVS*PVGTLL
Trigger: CAGTAGAGTCCCTACAGGCCAAGAAACTGAGCAGAA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGACATCTTGTGCATGGTaGAGGTCATTCGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTTSCAW*RSFDLC
Trigger: GCAGAGATCGAATGACCTCCACCATGCACAAGATGT...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTACATCTTGTGCATGGTaGAGGTCATTCGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASTSCAW*RSFDLC
Trigger: GCAGAGATCGAATGACCTCCACCATGCACAAGATGT...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTATACCGTCCTCTTCATaGAGAAAAATCGGAGTCGTG +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQAIPSSS*RKIGVV
Trigger: CACGACTCCGATTTTTCTCCATGAAGAGGACGGTAT...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTGGTGGAACAGATTCTaGACCAGACTCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASWWNRF*TRLRLQ
Trigger: TTGGAGTCTGAGTCTGGTCCAGAATCTGTTCCACCA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTCTGAAAGCATGTACCTaGGCACTGTCCATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLLKACT*ALSMQE
Trigger: TTCCTGCATGGACAGTGCCCAGGTACATGCTTTCAG...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAAAACCTCTCCTGTaGGCACCAAAAACACCTGTT +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFQKPLL*APKTPV
Trigger: AACAGGTGTTTTTGGTGCCCACAGGAGAGGTTTTTG...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTTTTTCAGGTCTGCTATaGGAAGCTCTGGGACATGGA +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSFSGLL*EALGHG
Trigger: TCCATGTCCCAGAGCTTCCCATAGCAGACCTGAAAA...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTATCCACTCCACTACCATaGCCAAAGCTCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLSTPLP*PKLRSW
Trigger: CCATGACCTGAGCTTTGGCCATGGTAGTGGAGTGGA...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAGCCAGGGTAAAGGGTTaGAATAAAAAGTTCCCATAT +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTARVKG*NKKFPY
Trigger: ATATGGGAACTTTTTATTCCAACCCTTTACCCTGGC...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACATGTACTTAGCCAATaGAGAAGACACTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRHVLSQ*RRHFSG
Trigger: CCCACTGAAGTGTCTTCTCCATTGGCTAAGTACATG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp GTCCTCATATGGATATACCTCCATCCCCTGATAATTTaGGCTGTTCTCTGGACCTTTCCTCCCTTTATCATA +
Preference number: 4 (lower is better)
Translates to: VLIWIYLHPLII*AVLWTFPPFII
Trigger: TATGATAAAGGGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCATATGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGCATGGCTTCACTCAGTaGCTCTGCATACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTHGFTQ*LCILHH
Trigger: ATGATGAAGTATGCAGAGTCACTGAGTGAAGCCATG...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGTCTGTGAACTCAATATaGATGGCAGAGACCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTSVNSI*MAETWV
Trigger: TACCCAGGTCTCTGCCATTCATATTGAGTTCACAGA...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTCTGTGAACTCAATATaGATGGCAGAGACCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASSVNSI*MAETWV
Trigger: TACCCAGGTCTCTGCCATTCATATTGAGTTCACAGA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCGGAAGTAATACTCTGTaGACTCAATATGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSGSNTL*TQYEWQ
Trigger: CTGCCATTCATATTGAGTTCACAGAGTATTACTTCC...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCTTCATCTTTCTGACTTaGATCTTCCAGCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSFIFLT*IFQLVD
Trigger: ATCTACAAGCTGGAAGATTCAAGTCAGAAAGATGAA...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCATCAAGGTATGGCCTTTaGAGTTTTCTGTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPSRYGL*SFLFPQ
Trigger: TTGAGGGAACAGAAAACTTCAAAGGCCATACCTTGA...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTAGGGAGACCCAGTCATTaGCTCTGTATCCTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLGRPSH*LCILSQ
Trigger: CTGACTAAGGATACAGAGTCAATGACTGGGTCTCCC...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATCCTGGGATACATCCTaGTTTTCAATGCTACTTTCC +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRSWDTS*FSMLLS
Trigger: GGAAAGTAGCATTGAAAATCAGGATGTATCCCAGGA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTTCCTGGGATACATCCTaGTTTTCAATGCTACTTTCC +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQASWDTS*FSMLLS
Trigger: GGAAAGTAGCATTGAAAATCAGGATGTATCCCAGGA...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCAGCATCCTTGGTCATGTaGATAGCACTTGACAATTCT +
Preference number: 4 (lower is better)
Translates to: QSLTIVITESLCFFQADPASLVM*IALDNS
Trigger: AGAATTGTCAAGTGCTATTCACATGACCAAGGATGC...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGCCATCAAATGACTGTTaGGATACCGTCCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTPSNDC*DTVLFM
Trigger: CATGAAGAGGACGGTATCTCAACAGTCATTTGATGG...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAACCATCAAATGACTGTTaGGATACCGTCCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQPSNDC*DTVLFM
Trigger: CATGAAGAGGACGGTATCTCAACAGTCATTTGATGG...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCAGCCAGTCTTCAAAGTTaGGGATTCCTGAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPASLQS*GFLKAC
Trigger: ACATGCTTTCAGGAATCCTCAACTTTGAAGACTGGC...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAATTTAAGTACTTCAGCTaGTGGTTTGTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQFKYFS*WFVLSS
Trigger: GCTGCTCAGGACAAACCATCAGCTGAAGTACTTAAA...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATTCAGCCAAATTGCTATaGGCTTGGTTCCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYSAKLL*AWFLFP
Trigger: TGGGAAAAGGAACCAAGCTCATAGCAATTTGGCTGA...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATAAAGGCCTTAGTGTCTaGAAGGATAGTGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYKGLSV*KDSASH
Trigger: GTGTGAAGCACTATCCTTTCAGACACTAAGGCCTTT...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACTCGTGAAGCTTTCCTaGGCATGTCTTAGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRLVKLS*ACLSKD
Trigger: ATCTTTACTAAGACATGCTCAGGAAAGCTTCACGAG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTAAGCATATGAACATCTaGTACATCCTCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQAKHMNI*YILQLC
Trigger: ACAGAGCTGGAGGATGTAGCAGATGTTCATATGCTT...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTTCACAAAGCTATCACTaGCATCACTGTCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSSQSYH*HHCPLK
Trigger: TTTCAGTGGACAGTGATGGCAGTGATAGCTTTGTGA...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGGATACAATCATGCTTTaGCCTTGTCCTCAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTDTIML*PCPQSK
Trigger: CTTGGACTGAGGACAAGGGCAAAGCATGATTGTATC...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATTTGAGGGACAGTGGTaGTATCTCTCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRFEGQW*YLSRHF
Trigger: AAAATGTCTGGAGAGATAGCACCACTGTCCCTCAAA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTATCACGGAGTCTTTGTaGTTCTTTCAAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFITESL*FFQADP
Trigger: TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGAT...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGCTTTTGAGGGCTATTTaGATCCTGCCTTGGTTCGTA +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTLLRAI*ILPWFV
Trigger: TACGAACCAAGGCAGGATCCAAATAGCCCTCAAAAG...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTGGTTCTTTCGAGGACTaGAAAGAGAATCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSGSFED*KENLLF
Trigger: GAAAAGCAGATTCTCTTTCCAGTCCTCGAAAGAACC...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGGAAAGGAGTGTAGATaGCTTTTTACTTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSGKECR*LFTWLS
Trigger: GGACAGCCAAGTAAAAAGCCATCTACACTCCTTTCC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTACATGTAGAGCCTCCTTaGTGGCATCCTTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLHVEPP*WHPWSC
Trigger: ACATGACCAAGGATGCCACCAAGGAGGCTCTACATG...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATCAAAAACCTCTCCTGTaGGCACCAAAAACACCTGTT +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYQKPLL*APKTPV
Trigger: AACAGGTGTTTTTGGTGCCCACAGGAGAGGTTTTTG...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCACGACATTTCTTTGCATaGAGGGATGCCAGAGGTATA +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPRHFFA*RDARGI
Trigger: TATACCTCTGGCATCCCTCCATGCAAAGAAATGTCG...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGTCTTTGAGGGACAGTaGTGCTATCTCTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPVFEGQ*CYLSRH
Trigger: ATGTCTGGAGAGATAGCACCACTGTCCCTCAAAGAC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp AAATCTGATTGTGTTATCAGCCAAATTGCTATGAGCTaGGTTCCTTTTCCCAAAAAGGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KSDCVISQIAMS*VPFPKKAESRS
Trigger: AGACCTGGACTCTGCCTTTTTGGGAAAAGGAACCAAGCTCATAGCAATTTGGCTGATAACACAATCAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp ATTCTGCCTTTGAAAGAGGCACTAAGGAGTAGTTTGTaGAGGGACACAGTTACCCTCTCAGTTGTATATTAC +
Preference number: 4 (lower is better)
Translates to: ILPLKEALRSSL*RDTVTLSVVYY
Trigger: GTAATATACAACTGAGAGGGTAACTGTGTCCCTCAACAAACTACTCCTTAGTGCCTCTTTCAAAGGCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTGGAAGGCCTTGGAGTaGATCTTGATGGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPWKALE*ILMVIE
Trigger: TTCTATCACCATCAAGATTCACTCCAAGGCCTTCCA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAATTCTCCATTTTGCTCTaGAATTCCATCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FQSQSLTIVITESLCFFQFSILL*NSITSF
Trigger: GAAGCTGGTGATGGAATTTCAGAGCAAAATGGAGAA...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTTCATCTTTCTGACTTaGATCTTCCAGCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSFIFLT*IFQLVD
Trigger: ATCTACAAGCTGGAAGATTCAAGTCAGAAAGATGAA...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTAAGTGTTCATCTTTCTaGCTTGAATCTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VFQSQSLTIVITESLCFFKCSSF*LESSSL
Trigger: CAAGCTGGAAGATTCAAGTCAGAAAGATGAACACTT...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTATCATCCTTTAGGGTaGTGCTGGAGTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPYHPLG*CWSSEA
Trigger: AGCTTCTGAACTCCAGCATCACCCTAAAGGATGATA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATTCTTTACTAAGGCTATaGGATAGAGCCCTAGAGCTA +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYSLLRL*DRALEL
Trigger: TAGCTCTAGGGCTCTATCTCATAGCCTTAGTAAAGA...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATGCAAAGCCTCATTGTTaGAGGTTATCCAAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYAKPHC*RLSKSV
Trigger: AACACTCTTGGATAACCTTCAACAATGAGGCTTTGC...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACATGGAGGATATCACATTaGAATCTTTGGTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTWRISH*NLWFFF
Trigger: AAAGAAGAACCAAAGATTGCAATGTGATATCCTCCA...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATTTTGCAGCTATCACCTaGCCAATGGAAAGGGTAATA +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYFAAIT*PMERVI
Trigger: TATTACCCTTTCCATTGGGCAGGTGATAGCTGCAAA...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTTTGCAGCTATCACCTaGCCAATGGAAAGGGTAATA +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASFAAIT*PMERVI
Trigger: TATTACCCTTTCCATTGGGCAGGTGATAGCTGCAAA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTTGTCCATACCACTACTaGCTTCTTTCAGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: QSQSLTIVITESLCFFQACPYHY*LLSEFP
Trigger: TGGAAATTCTGAAAGAAGGCAGTAGTGGTATGGACA...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGAAGCATATGAACATCTaGTACATCCTCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTKHMNI*YILQLC
Trigger: ACAGAGCTGGAGGATGTAGCAGATGTTCATATGCTT...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGAAAGAGAACTCCAATaGAAGCTGTCTGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSERELQ*KLSDSA
Trigger: TGCAGAATCAGACAGCTTGCATTGGAGTTCTCTTTC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTGAAAGAGAACTCCAATaGAAGCTGTCTGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASERELQ*KLSDSA
Trigger: TGCAGAATCAGACAGCTTGCATTGGAGTTCTCTTTC...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGGCAGTTCTTTCACCTaGTGTTCAAAAACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPGSSFT*CSKTSP
Trigger: AGGAGAGGTTTTTGAACAGCAGGTGAAAGAACTGCC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCCATCAAACTAGAGTATaGAAGTCAAGCATAATTTCC +
Preference number: 4 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSHQTRV*KSSIIS
Trigger: GGAAATTATGCTTGACTTGCATACTCTAGTTTGATG...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGATACCTACCCAGAGGTaGATGGGAATAATCCTATTC +
Preference number: 4 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTIPTQR*MGIILF
Trigger: GAATAGGATTATTCCCATGCACCTCTGGGTAGGTAT...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGTTATTGCTATGTCTaGTGTTCAAAAACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSCYCYV*CSKTSP
Trigger: AGGAGAGGTTTTTGAACAGCAGACATAGCAATAACA...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTATTTGGATCCTGCCTTaGTTCGTAATAAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSIWILP*FVISLN
Trigger: ATTGAGGCTTATTACGAACCAAGGCAGGATCCAAAT...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTATTAGGACAAGGAACTaGAAGCTCCTGATTATCTGG +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSIRTRN*KLLIIW
Trigger: CCAGATAATCAGGAGCTTCCAGTTCCTTGTCCTAAT...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCCCCATGTATAGTTTCTaGTGGCATCCCTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPPMYSF*WHPFLD
Trigger: GTCTAAGAAGGGATGCCACCAGAAACTATACATGGG...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCATCAAATCCCAAGTCTaGCCACTTAGCAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPIKSQV*PLSKAS
Trigger: TGAGGCTTTGCTAAGTGGCCAGACTTGGGATTTGAT...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCATGTGAATAGCACTTaGCAATTCTCCCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASHVNST*QFSLNV
Trigger: AACATTGAGGGAGAATTGTCAAGTGCTATTCACATG...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR TCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATTTCAGTATGGAAAGGTaGATGGTCGAGACTTTAGTA +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYFSMER*MVETLV
Trigger: TACTAAAGTCTCGACCATTCACCTTTCCATACTGAA...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATAGTCAAATGAAGTGTTaGGAGTGGAGAAGGAACAAA +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYSQMKC*EWRRNK
Trigger: TTTGTTCCTTCTCCACTCTCAACACTTCATTTGACT...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTACCCTATCACATTTCCTaGGGGAGAATTTCAAGACAC +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLPYHIS*GRISRH
Trigger: GTGTCTTGAAATTCTCCCTCAGGAAATGTGATAGGG...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTAATTGATAGCCATCCTTaGAGCCCAGTTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLIDSHP*SPVKDR
Trigger: CCTGTCTTTAACTGGGCTGCAAGGATGGCTATCAAT...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCAGAGAAGACACTTCAGTaGGGCATTCCACAAATAAAT +
Preference number: 4 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPEKTLQ*GIPQIN
Trigger: ATTTATTTGTGGAATGCCCCACTGAAGTGTCTTCTC...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp TGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTaGACTATTGTGATCACGGAGTCTTTGTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: CELLGTVFQSQS*TIVITESLCFF
Trigger: AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAGTAATTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTTGGAGGATATCACATTaGAATCTTTGGTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSWRISH*NLWFFF
Trigger: AAAGAAGAACCAAAGATTGCAATGTGATATCCTCCA...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTCATCCTGATTTTCAATaGTACTTTCCTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLHPDFQ*YFPPRP
Trigger: AGGTCTTGGAGGAAAGTAGCATTGAAAATCAGGATG...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR GCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTATCACAAAGCTATCACTaGCATCACTGTCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLSQSYH*HHCPLK
Trigger: TTTCAGTGGACAGTGATGGCAGTGATAGCTTTGTGA...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTGAAAGTGATCATAATTaGAATGAAAGAACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSFIFPARESGCLRFNNSESDHN*NERTQQ
Trigger: CTGCTGAGTTCTTTCATTCCAATTATGATCACTTTC...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGTCCTTGCTCTTGATTaGATATTTGATCTAACTCCC +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPVLALD*IFDLTP
Trigger: GGGAGTTAGATCAAATATCCAATCAAGAGCAAGGAC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATCAGGTGAGCCTAACGTaGAATAATTATATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYQVSLT*NNYIFQ
Trigger: CTGGAAAATATAATTATTCCACGTTAGGCTCACCTG...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCAGCCTTGGTACTTACTaGATATGTTTTTACTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPSLGTY*ICFYSH
Trigger: GTGGGAGTAAAAACATATCCAGTAAGTACCAAGGCT...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGCTATTGTATGTAACTaGCATCCCCAAGAATTCTTT +
Preference number: 4 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSAIVCN*HPQEFF
Trigger: AAAGAATTCTTGGGGATGCCAGTTACATACAATAGC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTAAAGTGTTCATCTTTCTaGCTTGAATCTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLKCSSF*LESSSL
Trigger: CAAGCTGGAAGATTCAAGTCAGAAAGATGAACACTT...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR TCA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGACTATGATAAATCATaGGGCAATGACACACCTTTT +
Preference number: 4 (lower is better)
Translates to: SSHITMAIFQTTFFALPPDYDKS*GNDTPF
Trigger: AAAAGGTGTGTCATTGCCTCATGATTTATCATAGTC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR GCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTATGTCCATACCACTACTaGCTTCTTTCAGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLCPYHY*LLSEFP
Trigger: TGGAAATTCTGAAAGAAGGCAGTAGTGGTATGGACA...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CCA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTAAATTTCAAGACACAATaGCCAAAGCTGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLNFKTQ*PKLPHK
Trigger: CTTATGTGGCAGCTTTGGCCATTGTGTCTTGAAATT...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp ACTTTAGTAACATCACTAAGTTACTATTTTACCATCTaGCCAAGTAAAGGTAAGTTAGCTGATGAACGTCTG +
Preference number: 4 (lower is better)
Translates to: TLVTSLSYYFTI*PSKGKLADERL
Trigger: CAGACGTTCATCAGCTAACTTACCTTTACTTGGCAAGATGGTAAAATAGTAACTTAGTGATGTTACTAAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
3UTR CAA 72 bp TTTTCAGGTGGTTCACAGAACCAGTACACTCAAAGTTaGACTAGATATTGCAACATTAAAATTTCCCAATAC +
Preference number: 4 (lower is better)
Translates to: FSGGSQNQYTQS*TRYCNIKISQY
Trigger: GTATTGGGAAATTTTAATGTTGCAATATCTAGTCAAACTTTGAGTGTACTGGTTCTGTGAACCACCTGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS CCA 90 bp CCGCGTGGAAGGCGGGTGGGCCGGCAGCTGTGGCCTCCTCAGTTGTaGAGAAGAGGCGGTCCCCTCACCTCGCCGCGGCGTGAGCACCGG +
Preference number: 5 (lower is better)
Translates to: PRGRRVGRQLWPPQL*RRGGPLTSPRREHR
Trigger: CCGGTGCTCACGCCGCGGCGAGGTGAGGGGACCGCCTCTTCTCCACAACTGAGGAGGCCACAGCTGCCGGCCCACCCGCCTTCCACGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp ATCTGCTTCTTAATGATCCCGGCCATGCCGGAGCCGCGGCCCGCGTaGAAGGCGGGTGGGCCGGCAGCTGTGGCCTCCTCAGTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ICFLMIPAMPEPRPA*KAGGPAAVASSVVE
Trigger: CTCCACAACTGAGGAGGCCACAGCTGCCGGCCCACCCGCCTTCCACGCGGGCCGCGGCTCCGGCATGGCCGGGATCATTAAGAAGCAGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 90 bp CTGTTGCTGTTGCCCTGGCTGCCACCAAATGCCTGGGCCCAGGACTaGTGGGCACTGGGGGCTGGTGGAGTGATCTGCACAGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: LLLLPWLPPNAWAQD*WALGAGGVICTGSG
Trigger: CCCTGAACCTGTGCAGATCACTCCACCAGCCCCCAGTGCCCAGCAGTCCTGGGCCCAGGCATTTGGTGGCAGCCAGGGCAACAGCAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp CACTGTCCATGCAGGAACTGCCAGAGTCCCACGGTGCCCAGCTGCTaGAGGGTCAGTTCCTCTGCTTGCAGGGCCACAGTCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: HCPCRNCQSPTVPSC*RVSSSACRATVRSS
Trigger: TGAGGACCTGACTGTGGCCCTGCAAGCAGAGGAACTGACCCTCCAGCAGCTGGGCACCGTGGGACTCTGGCAGTTCCTGCATGGACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 90 bp CAGAGTCCCACGGTGCCCAGCTGCTGGAGGGTCAGTTCCTCTGCTTaGAGGGCCACAGTCAGGTCCTCACCACGTACCTCAATCCCAAAA +
Preference number: 5 (lower is better)
Translates to: QSPTVPSCWRVSSSA*RATVRSSPRTSIPK
Trigger: TTTTGGGATTGAGGTACGTGGTGAGGACCTGACTGTGGCCCTGCAAGCAGAGGAACTGACCCTCCAGCAGCTGGGCACCGTGGGACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp ACCAGCTTCTGGGCCCACTGGCCTCGGGTCTCCATGGCCTCACAGTaGCGTACCCAATGTTTGCAGCTATCACCTGCCCAATGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: TSFWAHWPRVSMASQ*RTQCLQLSPAQWKG
Trigger: CCCTTTCCATTGGGCAGGTGATAGCTGCAAACATTGGGTACGCCACTGTGAGGCCATGGAGACCCGAGGCCAGTGGGCCCAGAAGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp GCCTGTAGGGACTCTACTGCCTCATGGCCCTTCCCTGCCAGCTGCTaGGCAAGTGGACCTGAGTCCTGCAGTTCTCCATTGCTATGTGGC +
Preference number: 5 (lower is better)
Translates to: ACRDSTASWPFPASC*ASGPESCSSPLLCG
Trigger: GCCACATAGCAATGGAGAACTGCAGGACTCAGGTCCACTTGCCCAGCAGCTGGCAGGGAAGGGCCATGAGGCAGTAGAGTCCCTACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 90 bp TACTGCCTCATGGCCCTTCCCTGCCAGCTGCTGGGCAAGTGGACCTaGGTCCTGCAGTTCTCCATTGCTATGTGGCCTCTCCTGGGATAC +
Preference number: 5 (lower is better)
Translates to: YCLMALPCQLLGKWT*VLQFSIAMWPLLGY
Trigger: GTATCCCAGGAGAGGCCACATAGCAATGGAGAACTGCAGGACTCAGGTCCACTTGCCCAGCAGCTGGCAGGGAAGGGCCATGAGGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 90 bp TTGGCCTGTAGGGACTCTACTGCCTCATGGCCCTTCCCTGCCAGCTaGTGGGCAAGTGGACCTGAGTCCTGCAGTTCTCCATTGCTATGT +
Preference number: 5 (lower is better)
Translates to: LACRDSTASWPFPAS*WASGPESCSSPLLC
Trigger: ACATAGCAATGGAGAACTGCAGGACTCAGGTCCACTTGCCCAGCAGCTGGCAGGGAAGGGCCATGAGGCAGTAGAGTCCCTACAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 90 bp GTCTTGGCCATGGGCTCCTTGGCTGGGGGCAGGGACAACATCTTGTaGATGGTGGAGGTCATTCGATCTCTGCCCAAACTGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: VLAMGSLAGGRDNIL*MVEVIRSLPKLKAS
Trigger: GGATGCCTTCAGTTTGGGCAGAGATCGAATGACCTCCACCATGCACAAGATGTTGTCCCTGCCCCCAGCCAAGGAGCCCATGGCCAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp TCAATGCAGCTGGTGAGCTGGAGGCTTGGGTTCTGCTCAGTTTCTTaGCCTGTAGGGACTCTACTGCCTCATGGCCCTTCCCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SMQLVSWRLGFCSVS*PVGTLLPHGPSLPA
Trigger: AGCTGGCAGGGAAGGGCCATGAGGCAGTAGAGTCCCTACAGGCCAAGAAACTGAGCAGAACCCAAGCCTCCAGCTCACCAGCTGCATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS-3UTR CAA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTTCCTGCAGTTCTCCATaGCTATGTGGCCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KLWDMESLVALWVTEEVGSCSSP*LCGLSW
Trigger: CCAGGAGAGGCCACATAGCAATGGAGAACTGCAGGA...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS TCA 90 bp TTGTCCACTGGATCCGGATGGAGGCCCTGTTGCAGTAGACCCGAGTaGTGGCTAACCAGGTGGGCAGCTCCAGTACATTCTGTAGAACCT +
Preference number: 5 (lower is better)
Translates to: LSTGSGWRPCCSRPE*WLTRWAAPVHSVEP
Trigger: AGGTTCTACAGAATGTACTGGAGCTGCCCACCTGGTTAGCCATCACTCGGGTCTACTGCAACAGGGCCTCCATCCGGATCCAGTGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 90 bp GGTGGTTTCAGACCCGTCTCTTCATGCCACTTCTCCATTTTGCTCTaGAATTCCATCACCAGCTTCTGGGCCCACTGGCCTCGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GGFRPVSSCHFSILL*NSITSFWAHWPRVS
Trigger: GGAGACCCGAGGCCAGTGGGCCCAGAAGCTGGTGATGGAATTTCAGAGCAAAATGGAGAAGTGGCATGAAGAGACGGGTCTGAAACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp CGTGTATTGGTGGCAATCATGCCTGACGCAGAGAAGACAAGGGCCTaGGGACGATGCAACTCTGCCCGCTCTCTCTTTTCCAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: RVLVAIMPDAEKTRA*GRCNSARSLFSSGK
Trigger: CTTTCCACTGGAAAAGAGAGAGCGGGCAGAGTTGCATCGTCCCCAGGCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 90 bp GCTGGTGGAGTGATCTGCACAGGTTCAGGGGCCAGGCTCTTTCTTTaGTGGGCTGACTTCTCCATGGCTTCACTCAGTGACTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSGARLFL*WADFSMASLSDSAY
Trigger: GTATGCAGAGTCACTGAGTGAAGCCATGGAGAAGTCAGCCCATCAAAGAAAGAGCCTGGCCCCTGAACCTGTGCAGATCACTCCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 90 bp ACAACTACAATGTGGAGCATGACGTGTATTGGTGGCAATCATGCCTaGCGCAGAGAAGACAAGGGCCTGGGGACGATGCAACTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: TTTMWSMTCIGGNHA*RREDKGLGTMQLCP
Trigger: CGGGCAGAGTTGCATCGTCCCCAGGCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 90 bp TGGTCAAGCCTCACGCGGACATGGGCCGGGGAATGTACAAGCATATaGACATCTGCTACATCCTCCAGCTCTGTCAGAGGCCCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: WSSLTRTWAGECTSI*TSATSSSSVRGPLL
Trigger: CAACAAAGGGCCTCTGACAGAGCTGGAGGATGTAGCAGATGTTCATATGCTTGTACATTCCCCGGCCCATGTCCGCGTGAGGCTTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 90 bp CCTCACGCGGACATGGGCCGGGGAATGTACAAGCATATGAACATCTaGTACATCCTCCAGCTCTGTCAGAGGCCCTTTGTTGTCCATACC +
Preference number: 5 (lower is better)
Translates to: PHADMGRGMYKHMNI*YILQLCQRPFVVHT
Trigger: GGTATGGACAACAAAGGGCCTCTGACAGAGCTGGAGGATGTAGCAGATGTTCATATGCTTGTACATTCCCCGGCCCATGTCCGCGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS-3UTR CAA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACTTTCTCGCCCCTCTTaGGGCGCCTGGCGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRLSRPS*GAWRSA
Trigger: GGCGGAGCGCCAGGCGCCCAAAGAGGGGCGAGAAAG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTGGTGGGTACTTTTGCTaGTTCACACAGGCCTGTGAA +
Preference number: 5 (lower is better)
Translates to: KLWDMESLVALWVTEEVGGGYFC*FTQACE
Trigger: TTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACC...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTCAAAGTTTCACCATGTaGGCCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: KLWDMESLVALWVTEEVGQSFTM*ARMVSI
Trigger: GATCGAGACCATCCTGGCCAACATGGTGAAACTTTG...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS GCA 90 bp GGGATATCATCCTTTAGGGTGATGCTGGAGTTCAGAAGCTCAATCTaGATGGGGACTACCACCGGGATCTCCTCATCCTCCAAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: GISSFRVMLEFRSSI*MGTTTGISSSSKKG
Trigger: GCCCTTCTTGGAGGATGAGGAGATCCCGGTGGTAGTCCCCATGCAGATTGAGCTTCTGAACTCCAGCATCACCCTAAAGGATGATATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp GACTCTGGAGGTCTGAACAACTACAATGTGGAGCATGACGTGTATTaGTGGCAATCATGCCTGACGCAGAGAAGACAAGGGCCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: DSGGLNNYNVEHDVY*WQSCLTQRRQGPGD
Trigger: GTCCCCAGGCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGTTCAGACCTCCAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp TCAATGCTACTTTCCTCCAAGACCTTCTCAGGGCTTGCTGGGCCCTaGTCTGATGAGGCATCAGACTTCAGTTCCCGATCCTCTGAAGGA +
Preference number: 5 (lower is better)
Translates to: SMLLSSKTFSGLAGP*SDEASDFSSRSSEG
Trigger: TCCTTCAGAGGATCGGGAACTGAAGTCTGATGCCTCATCAGACCAGGGCCCAGCAAGCCCTGAGAAGGTCTTGGAGGAAAGTAGCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS-3UTR CAA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGGGTGTGTCTTCAACTTaGTCCACTGGATCCGGATGG +
Preference number: 5 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKGVSST*STGSGW
Trigger: CCATCCGGATCCAGTGGACAAAGTTGAAGACACACC...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAAAAACACCTGTTCTTTaGGGGGCTGTCTCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: QARHDACATHRASPSFLGKTPVL*GAVSSH
Trigger: GTGAGAAGAGACAGCCCCCAAAAGAACAGGTGTTTT...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAGGATACAATCATGCTTaGCCCTTGTCCTCAGTCCAA +
Preference number: 5 (lower is better)
Translates to: QARHDACATHRASPSFLGGYNHA*PLSSVQ
Trigger: TTGGACTGAGGACAAGGGCAAAGCATGATTGTATCC...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS TCA 90 bp CCCCGGAAGAGACTCTGGAGGTCTGAACAACTACAATGTGGAGCATaGCGTGTATTGGTGGCAATCATGCCTGACGCAGAGAAGACAAGG +
Preference number: 5 (lower is better)
Translates to: PRKRLWRSEQLQCGA*RVLVAIMPDAEKTR
Trigger: CCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGTTCAGACCTCCAGAGTCTCTTCCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 90 bp CTGAACAACTACAATGTGGAGCATGACGTGTATTGGTGGCAATCATaGCTGACGCAGAGAAGACAAGGGCCTGGGGACGATGCAACTCTG +
Preference number: 5 (lower is better)
Translates to: LNNYNVEHDVYWWQS*LTQRRQGPGDDATL
Trigger: CAGAGTTGCATCGTCCCCAGGCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp GGTAGGGAGGTTGTGAAGTTTCCGACTGCAGGAAAGGAGTGTAGATaGCTTTTTACTTGGCTGTCCAGCGGTGGAAACCTGGTGGATGTC +
Preference number: 5 (lower is better)
Translates to: GREVVKFPTAGKECR*LFTWLSSGGNLVDV
Trigger: GACATCCACCAGGTTTCCACCGCTGGACAGCCAAGTAAAAAGCCATCTACACTCCTTTCCTGCAGTCGGAAACTTCACAACCTCCCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp TCTGGAGGTCTGAACAACTACAATGTGGAGCATGACGTGTATTGGTaGCAATCATGCCTGACGCAGAGAAGACAAGGGCCTGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: SGGLNNYNVEHDVYW*QSCLTQRRQGPGDD
Trigger: ATCGTCCCCAGGCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGTTCAGACCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS-3UTR CAA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTCTTTCTCGCCCCTCTTaGGGCGCCTGGCGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLLSRPS*GAWRSA
Trigger: GGCGGAGCGCCAGGCGCCCAAAGAGGGGCGAGAAAG...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGCTGTGGCCTCCTCAGTaGTGGAGAAGAGGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: LGTVFQSQSLTIVITESLLWPPQ*WRRGGP
Trigger: GGGACCGCCTCTTCTCCACAACTGAGGAGGCCACAG...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCTCTTTTGAGGGCTATTaGGATCCTGCCTTGGTTCGT +
Preference number: 5 (lower is better)
Translates to: VCYGKLWDMESLVALWVTSFEGY*DPALVR
Trigger: ACGAACCAAGGCAGGATCCAAATAGCCCTCAAAAGA...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTTGGCCATGGGCTCCTaGGCTGGGGGCAGGGACAAC +
Preference number: 5 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLLAMGS*AGGRDN
Trigger: GTTGTCCCTGCCCCCAGCCAAGGAGCCCATGGCCAA...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCGGTCAGTTCCTCTGCTaGCAGGGCCACAGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSGQFLC*QGHSQV
Trigger: GACCTGACTGTGGCCCTGCAAGCAGAGGAACTGACC...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAAAACAGAATTTGGGATaGATAGCCATCCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: QARHDACATHRASPSFLGKQNLG*IAILAA
Trigger: GGCTGCAAGGATGGCTATCAATCCCAAATTCTGTTT...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAGCAGTAATAAGGCTATaGTATGTAACTGGCATCCCC +
Preference number: 5 (lower is better)
Translates to: QARHDACATHRASPSFLGAVIRL*YVTGIP
Trigger: GGGGATGCCAGTTACATACAATAGCCTTATTACTGC...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS CCA 90 bp CCAATGAGACACCATCAAATGACTGTTGAGATACCGTCCTCTTCATaGAGAAAAATCGGAGTCGTGCAGCACCTCCACTCACTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PMRHHQMTVEIPSSS*RKIGVVQHLHSLGL
Trigger: CAGCCCCAGTGAGTGGAGGTGCTGCACGACTCCGATTTTTCTCCATGAAGAGGACGGTATCTCAACAGTCATTTGATGGTGTCTCATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS-3UTR CAA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTAACAGGAACATCAGCTaGGAGGATATCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: KLWDMESLVALWVTEEVGNRNIS*EDITLQ
Trigger: TTGCAATGTGATATCCTCCAAGCTGATGTTCCTGTT...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGTACTTCATCATAGCCTaGAGCTGTGAGTCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKYFIIA*SCESVS
Trigger: GCTGACTGACTCACAGCTCAAGGCTATGATGAAGTA...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAAGGGACACAGCTTCCTaGGTGAGGTCCATGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTRDTAS*VRSMVA
Trigger: TGCCACCATGGACCTCACCAAGGAAGCTGTGTCCCT...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGTTGGCCATGGGCTCCTaGGCTGGGGGCAGGGACAAC +
Preference number: 5 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTLAMGS*AGGRDN
Trigger: GTTGTCCCTGCCCCCAGCCAAGGAGCCCATGGCCAA...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCGGTGAAACTGAACTGTaGGCTGCTGGTGACCCCTGG +
Preference number: 5 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSGETEL*AAGDPW
Trigger: CCAGGGGTCACCAGCAGCCAACAGTTCAGTTTCACC...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAGGCAAGACATGATGCTTGTGCCACACACAGGGCAAGCCCCAGTTTCCTGGGAGGCATTGGCCAAGGCTaGTTTAGTTTCTATAAGTTC +
Preference number: 5 (lower is better)
Translates to: QARHDACATHRASPSFLGGIGQG*FSFYKF
Trigger: GAACTTATAGAAACTAAACAAGCCTTGGCCAATGCC...TCCCAGGAAACTGGGGCTTGCCCTGTGTGTGGCACAAGCATCATGTCTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTTTAGAGATGCCATACTaGACCAGTGATCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: KLWDMESLVALWVTEEVGLEMPY*TSDPFR
Trigger: TCTGAATGGATCACTGGTCAAGTATGGCATCTCTAA...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS TCA 90 bp CTGCCTTGGTTCGTAATAAGCCTCAATGGAGTGGTGACTGGGTCCTaGTCACCATTGTCTGTAGCATCTGCCTCAATTCGGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: LPWFVISLNGVVTGS*SPLSVASASIRSVC
Trigger: GCAAACACTCCGAATTGAGGCAGATGCTACAGACAATGGTGATCAGGACCCAGTCACCACTCCATTGAGGCTTATTACGAACCAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp TTGGATCCTGCCTTGGTTCGTAATAAGCCTCAATGGAGTGGTGACTaGGTCCTGATCACCATTGTCTGTAGCATCTGCCTCAATTCGGAG +
Preference number: 5 (lower is better)
Translates to: LDPALVRNKPQWSGD*VLITIVCSICLNSE
Trigger: CTCCGAATTGAGGCAGATGCTACAGACAATGGTGATCAGGACCCAGTCACCACTCCATTGAGGCTTATTACGAACCAAGGCAGGATCCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp ATCTGCTTTTCTCCGAAAGAGAGAGTCTACTCCAAGGTGCCAGGGTaGTTTCAGACCCGTCTCTTCATGCCACTTCTCCATTTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: ICFSPKERVYSKVPG*FQTRLFMPLLHFAL
Trigger: CAGAGCAAAATGGAGAAGTGGCATGAAGAGACGGGTCTGAAACCACCCTGGCACCTTGGAGTAGACTCTCTCTTTCGGAGAAAAGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp AGTCCTGATAAGCTTTTCAAGTCATGTTCAGTCTTTGACCGCGGATaGGACATAGAGTCAGGGGCAAGAGCCTCAGACTGGACAGGACTT +
Preference number: 5 (lower is better)
Translates to: SPDKLFKSCSVFDRG*DIESGARASDWTGL
Trigger: AAGTCCTGTCCAGTCTGAGGCTCTTGCCCCTGACTCTATGTCCCATCCGCGGTCAAAGACTGAACATGACTTGAAAAGCTTATCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp CTAGGTGGTGCTATTGCTGGTGATAGCCTCTCTCCTTGGCACAGATaGCTGAGCCACTGGTTTCAGAGCTCAAAGAAGGGGTTATATTTC +
Preference number: 5 (lower is better)
Translates to: LGGAIAGDSLSPWHR*LSHWFQSSKKGLYF
Trigger: GAAATATAACCCCTTCTTTGAGCTCTGAAACCAGTGGCTCAGCCATCTGTGCCAAGGAGAGAGGCTATCACCAGCAATAGCACCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp GTCTGCTATGGGAAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGTGCTCAGGTTGATTTaGTCTGGGGAAAGATTCTTA +
Preference number: 5 (lower is better)
Translates to: VCYGKLWDMESLVALWVTVLRLI*SGERFL
Trigger: TAAGAATCTTTCCCCAGACAAAATCAACCTGAGCAC...GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTTCCCATAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTGGTCAGTTCCTCTGCTaGCAGGGCCACAGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: VFQSQSLTIVITESLCFFGQFLC*QGHSQV
Trigger: GACCTGACTGTGGCCCTGCAAGCAGAGGAACTGACC...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTCCTCTGCTTTCATCTTaGCAGGATAGAGTCTATATT +
Preference number: 5 (lower is better)
Translates to: KLWDMESLVALWVTEEVGPLLSS*QDRVYI
Trigger: AATATAGACTCTATCCTGCAAAGATGAAAGCAGAGG...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTATTAGGAGGTTAGCCTaGGTACTTACTGGATATGTT +
Preference number: 5 (lower is better)
Translates to: KLWDMESLVALWVTEEVGIRRLA*VLTGYV
Trigger: AACATATCCAGTAAGTACCAAGGCTAACCTCCTAAT...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CCCACACTCCTCTGCTGGACTATTTCCTGTTCCACTCCACTACCATGGCCAAAGGGTGGTGTTTATACCTaGTATATTCCACACACGGGA +
Preference number: 5 (lower is better)
Translates to: PTLLCWTISCSTPLPWPKGGVYT*YIPHTG
Trigger: TCCCGTGTGTGGAATATACAAGGTATAAACACCACC...CTTTGGCCATGGTAGTGGAGTGGAACAGGAAATAGTCCAGCAGAGGAGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AAGCTCTGGGACATGGAATCTTTGGTGGCTCTGTGGGTGACCGAGGAGGTGGGTTGTCATCGAACTAACTaGTGTACCAAAGTTCAGTTG +
Preference number: 5 (lower is better)
Translates to: KLWDMESLVALWVTEEVGCHRTN*CTKVQL
Trigger: CAACTGAACTTTGGTACACAAGTTAGTTCGATGACA...ACCCACCTCCTCGGTCACCCACAGAGCCACCAAAGATTCCATGTCCCAGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS TCA 90 bp CTCGGGACTGGCTATCATCACAAATGTGCAGGTCCAGGCGGGAGATaGGCAGATGGTAGGAGGACTCTTTCACATCAAATTTCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: LGTGYHHKCAGPGGR*ADGRRTLSHQISQS
Trigger: ACTTTGAGAAATTTGATGTGAAAGAGTCCTCCTACCATCTGCTCATCTCCCGCCTGGACCTGCACATTTGTGATGATAGCCAGTCCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 90 bp TCCATGGTGGCATGTAGAGCCTCCTTGGTGGCATCCTTGGTCATGTaGATAGCACTTGACAATTCTCCCTCAATGTTCTTCAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: SMVACRASLVASLVM*IALDNSPSMFFKGM
Trigger: CATCCCCTTGAAGAACATTGAGGGAGAATTGTCAAGTGCTATTCACATGACCAAGGATGCCACCAAGGAGGCTCTACATGCCACCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 90 bp GAAAGAGAATCTGCTTTTCTCCGAAAGAGAGAGTCTACTCCAAGGTaGCAGGGTGGTTTCAGACCCGTCTCTTCATGCCACTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: ERESAFLRKRESTPR*QGGFRPVSSCHFSI
Trigger: AATGGAGAAGTGGCATGAAGAGACGGGTCTGAAACCACCCTGGCACCTTGGAGTAGACTCTCTCTTTCGGAGAAAAGCAGATTCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 90 bp TATCACTGCCATCACTGTCCACTGAAATCCGGTCTTCAGGGCCACTaGTATCCAATGAGACACCATCAAATGACTGTTGAGATACCGTCC +
Preference number: 5 (lower is better)
Translates to: YHCHHCPLKSGLQGH*YPMRHHQMTVEIPS
Trigger: GGACGGTATCTCAACAGTCATTTGATGGTGTCTCATTGGATAGCAGTGGCCCTGAAGACCGGATTTCAGTGGACAGTGATGGCAGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 90 bp TTTGAGGGCTATTTGGATCCTGCCTTGGTTCGTAATAAGCCTCAATaGAGTGGTGACTGGGTCCTGATCACCATTGTCTGTAGCATCTGC +
Preference number: 5 (lower is better)
Translates to: FEGYLDPALVRNKPQ*SGDWVLITIVCSIC
Trigger: GCAGATGCTACAGACAATGGTGATCAGGACCCAGTCACCACTCCATTGAGGCTTATTACGAACCAAGGCAGGATCCAAATAGCCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS-3UTR CAA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCTTCAGGGTGCTCAGGTaGATTTTGTCTGGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: EEVGTFACSHRPVKEANVFRVLR*ILSGER
Trigger: TCTTTCCCCAGACAAAATCAACCTGAGCACCCTGAA...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp TGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTCTGCTGCTGTTGCTGTaGCCCTGGCTGCCACCAAAT +
Preference number: 5 (lower is better)
Translates to: CVPKPVFDYCDHGVFVLLLLLLL*PWLPPN
Trigger: ATTTGGTGGCAGCCAGGGCAACAGCAACAGCAGCAG...AAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGACCACCCATGAGTCTGTaGGCAGAGACACCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRPPMSL*AETPGS
Trigger: AGAGCCAGGTGTCTCTGCCAACAGACTCATGGGTGG...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCGCATGTAGAGCCTCCTaGGTGGCATCCTTGGTCATG +
Preference number: 5 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSACRAS*VASLVM
Trigger: CATGACCAAGGATGCCACCAAGGAGGCTCTACATGC...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS TCA 90 bp AAAGAACTCAGCAGCAGCAAAACCCCGGAAGAGACTCTGGAGGTCTaGACAACTACAATGTGGAGCATGACGTGTATTGGTGGCAATCAT +
Preference number: 5 (lower is better)
Translates to: KELSSSKTPEETLEV*TTTMWSMTCIGGNH
Trigger: ATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGTTCAGACCTCCAGAGTCTCTTCCGGGGTTTTGCTGCTGCTGAGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 90 bp TCTTCAGGGCCACTGCTATCCAATGAGACACCATCAAATGACTGTTaGGATACCGTCCTCTTCATGGAGAAAAATCGGAGTCGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SSGPLLSNETPSNDC*DTVLFMEKNRSRAA
Trigger: TGCTGCACGACTCCGATTTTTCTCCATGAAGAGGACGGTATCTCAACAGTCATTTGATGGTGTCTCATTGGATAGCAGTGGCCCTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS-3UTR CAA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTACTGTGGCCTCCTCAGTaGTGGAGAAGAGGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLLWPPQ*WRRGGP
Trigger: GGGACCGCCTCTTCTCCACAACTGAGGAGGCCACAG...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp ATGGAAGCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATCTGCTGCTGTTGCTGTaGCCCTGGCTGCCACCAAAT +
Preference number: 5 (lower is better)
Translates to: MEAFKLQGYVRGGVYTLYLLLLL*PWLPPN
Trigger: ATTTGGTGGCAGCCAGGGCAACAGCAACAGCAGCAG...ATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGCTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCCACCCATGAGTCTGTaGGCAGAGACACCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASPPMSL*AETPGS
Trigger: AGAGCCAGGTGTCTCTGCCAACAGACTCATGGGTGG...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGGCGTACCCAATGTTaGCAGCTATCACCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSWRTQC*QLSPAQ
Trigger: TTGGGCAGGTGATAGCTGCAAACATTGGGTACGCCA...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTTCCTGCAGTTCTCCATaGCTATGTGGCCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VSFIFPARESGCLRFNNSSCSSP*LCGLSW
Trigger: CCAGGAGAGGCCACATAGCAATGGAGAACTGCAGGA...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAGCATGTAGAGCCTCCTaGGTGGCATCCTTGGTCATG +
Preference number: 5 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRACRAS*VASLVM
Trigger: CATGACCAAGGATGCCACCAAGGAGGCTCTACATGC...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAAGGGACACAGCTTCCTaGGTGAGGTCCATGGTGGCA +
Preference number: 5 (lower is better)
Translates to: FQSQSLTIVITESLCFFQRDTAS*VRSMVA
Trigger: TGCCACCATGGACCTCACCAAGGAAGCTGTGTCCCT...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGGGCAGGGACAACATCTaGTGCATGGTGGAGGTCATT +
Preference number: 5 (lower is better)
Translates to: LGTVFQSQSLTIVITESLGRDNI*CMVEVI
Trigger: AATGACCTCCACCATGCACAAGATGTTGTCCCTGCC...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTGGTGAAACTGAACTGTaGGCTGCTGGTGACCCCTGG +
Preference number: 5 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASGETEL*AAGDPW
Trigger: CCAGGGGTCACCAGCAGCCAACAGTTCAGTTTCACC...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS TCA 90 bp CCCTGGAGCTGCCACAATTCAAAAGAAGCGTGGAAGGCCTTGGAGTaGATCTTGATGGTGATAGAATTGACAATGATGAACATCCCTTCC +
Preference number: 5 (lower is better)
Translates to: PWSCHNSKEAWKALE*ILMVIELTMMNIPS
Trigger: GGAAGGGATGTTCATCATTGTCAATTCTATCACCATCAAGATTCACTCCAAGGCCTTCCACGCTTCTTTTGAATTGTGGCAGCTCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS-3UTR CAA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCTATTTGGATCCTGCCTaGGTTCGTAATAAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: EEVGTFACSHRPVKEANVYLDPA*VRNKPQ
Trigger: TTGAGGCTTATTACGAACCAAGGCAGGATCCAAATA...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGAAGGAGGTGGGTACTTTaGCTTGTTCACACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRRRWVL*LVHTGL
Trigger: CAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCT...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp GAGGAGGTGGGTACTTTTGCTTGTTCACACAGGCCTGTGAAGGAAGCAAATGTCAGCAAAGCCTCATTGTaGAAGGTTATCCAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: EEVGTFACSHRPVKEANVSKASL*KVIQEC
Trigger: ACACTCTTGGATAACCTTCAACAATGAGGCTTTGCT...GACATTTGCTTCCTTCACAGGCCTGTGTGAACAAGCAAAAGTACCCACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp TTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGGTGTGTCTTCAACTTaGTCCACTGGATCCGGATGG +
Preference number: 5 (lower is better)
Translates to: FQSQSLTIVITESLCFFQGVSST*STGSGW
Trigger: CCATCCGGATCCAGTGGACAAAGTTGAAGACACACC...TTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTGTCAGAGGCCCTTTGTaGTCCATACCACTACTGCCT +
Preference number: 5 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASVRGPL*SIPLLP
Trigger: AGGCAGTAGTGGTATGGACAACAAAGGGCCTCTGAC...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTGGCAGGGACAACATCTaGTGCATGGTGGAGGTCATT +
Preference number: 5 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSGRDNI*CMVEVI
Trigger: AATGACCTCCACCATGCACAAGATGTTGTCCCTGCC...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCAAAACACCTGTTCTTTaGGGGGCTGTCTCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSKTPVL*GAVSSH
Trigger: GTGAGAAGAGACAGCCCCCAAAAGAACAGGTGTTTT...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCTTATCCTGGTTGGCATaGGCCAAGGCTTGTTTAGTT +
Preference number: 5 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSLSWLA*AKACLV
Trigger: AACTAAACAAGCCTTGGCCAATGCCAACCAGGATAA...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTGGGACATGGAATCTTaGGTGGCTCTGTGGGTGACC +
Preference number: 5 (lower is better)
Translates to: SSHITMAIFQTTFFALPPWDMES*VALWVT
Trigger: GGTCACCCACAGAGCCACCAAAGATTCCATGTCCCA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCAGGTCTCCCTTATTCTaGTGCCTCTCCTGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: SSHITMAIFQTTFFALPPRSPLF*CLSCPL
Trigger: AAGGGGGCAGGAGAGGCACAAGAATAAGGGAGACCT...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCACAGTGGCTGAAGTCTTaGAGGGACAGTGGTGCTATC +
Preference number: 5 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPQWLKS*RDSGAI
Trigger: GATAGCACCACTGTCCCTCAAAGACTTCAGCCACTG...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp GTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTTTCAGGGTGCTCAGGTaGATTTTGTCTGGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: VFQSQSLTIVITESLCFFFRVLR*ILSGER
Trigger: TCTTTCCCCAGACAAAATCAACCTGAGCACCCTGAA...AAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp GTTTCTTTCATCTTCCCAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTTCTTTTGAGGGCTATTaGGATCCTGCCTTGGTTCGT +
Preference number: 5 (lower is better)
Translates to: VSFIFPARESGCLRFNNSSFEGY*DPALVR
Trigger: ACGAACCAAGGCAGGATCCAAATAGCCCTCAAAAGA...ACTGTTGTTAAATCTGAGACATCCTGACTCTCGAGCTGGGAAGATGAAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCATACTTCATCATAGCCTaGAGCTGTGAGTCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QSLTIVITESLCFFQADPYFIIA*SCESVS
Trigger: GCTGACTGACTCACAGCTCAAGGCTATGATGAAGTA...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCTGGCGTACCCAATGTTaGCAGCTATCACCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: SSHITMAIFQTTFFALPPWRTQC*QLSPAQ
Trigger: TTGGGCAGGTGATAGCTGCAAACATTGGGTACGCCA...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGTCAGAGGCCCTTTGTaGTCCATACCACTACTGCCT +
Preference number: 5 (lower is better)
Translates to: SSHITMAIFQTTFFALPPVRGPL*SIPLLP
Trigger: AGGCAGTAGTGGTATGGACAACAAAGGGCCTCTGAC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGGTTCTGCTCAGTTTCTaGGCCTGTAGGGACTCTACT +
Preference number: 5 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTVLLSF*ACRDST
Trigger: AGTAGAGTCCCTACAGGCCAAGAAACTGAGCAGAAC...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp TTACACTTAATCCTGAGGACTACCACCACTTCGCATTTCTTCATTATGAACACGTTCAAACTACCTTCTTaGCACTACCACCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: LHLILRTTTTSHFFIMNTFKLPS*HYHPSP
Trigger: GGGGGATGGGTGGTAGTGCAAAGAAGGTAGTTTGAA...CGTGTTCATAATGAAGAAATGCGAAGTGGTGGTAGTCCTCAGGATTAAGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp ATGGATATACCTCCATCCCCTGATAATTTTGGCTGTTCTCTGGACCTTTCCTCCCTTAGCAAAGCCTCATaGTTGAAGGTTATCCAAGAG +
Preference number: 5 (lower is better)
Translates to: MDIPPSPDNFGCSLDLSSLSKAS*LKVIQE
Trigger: CTCTTGGATAACCTTCAACAATGAGGCTTTGCTAAG...GGAGGAAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATGGAGGTATATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTATTTGGATCCTGCCTaGGTTCGTAATAAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: PKPVFDYCDHGVFVLLSSYLDPA*VRNKPQ
Trigger: TTGAGGCTTATTACGAACCAAGGCAGGATCCAAATA...GCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CTTGGTACTGTGTTCCAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGAACAGGAACATCAGCTaGGAGGATATCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: LGTVFQSQSLTIVITESLNRNIS*EDITLQ
Trigger: TTGCAATGTGATATCCTCCAAGCTGATGTTCCTGTT...CAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAACACAGTACCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTGTTCTGCTCAGTTTCTaGGCCTGTAGGGACTCTACT +
Preference number: 5 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLVLLSF*ACRDST
Trigger: AGTAGAGTCCCTACAGGCCAAGAAACTGAGCAGAAC...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCATACAGGACCGGGTCCTaGCTCTTGATTGGATATTTG +
Preference number: 5 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPYRTGS*LLIGYL
Trigger: CAAATATCCAATCAAGAGCAAGGACCCGGTCCTGTA...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCTATTCGACATTTCTTaGCATGGAGGGATGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSLFDIS*HGGMPE
Trigger: CTCTGGCATCCCTCCATGCAAAGAAATGTCGAATAG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCATTCCAAAGCCAGTCTTaGACTATTGTGATCACGGAG +
Preference number: 5 (lower is better)
Translates to: QSLTIVITESLCFFQADPFQSQS*TIVITE
Trigger: CTCCGTGATCACAATAGTCAAAGACTGGCTTTGGAA...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp AGAAATTCTAAGGCTCCATTTGTGACATGGACAAGAGCTCTGGACTCCTTTAGATCTTTGGTTCTTCTTTaGAGGGCTATTTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: RNSKAPFVTWTRALDSFRSLVLL*RAIWIL
Trigger: CAGGATCCAAATAGCCCTCAAAAGAAGAACCAAAGA...TCTAAAGGAGTCCAGAGCTCTTGTCCATGTCACAAATGGAGCCTTAGAATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTTCTTTGGTTCTTCTTTaGAGGGCTATTTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: QSQSLTIVITESLCFFQASLVLL*RAIWIL
Trigger: CAGGATCCAAATAGCCCTCAAAAGAAGAACCAAAGA...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CTTGTATATTCCACACACGGGAGCCAGTCCTTTCAGAGCCATAAAAAGCACACAGACATATCCATGGTTTaGTATAAAGTGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LVYSTHGSQSFQSHKKHTDISMV*YKVLFS
Trigger: AGAGAACAGCACTTTATACAAAACCATGGATATGTC...TGTGTGCTTTTTATGGCTCTGAAAGGACTGGCTCCCGTGTGTGGAATATACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCACTGTGTCTCAGAATGTaGTTATTGCTATGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: QSLTIVITESLCFFQADPLCLRM*LLLCLL
Trigger: CAGCAGACATAGCAATAACAACATTCTGAGACACAG...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp GCATTTAAGTTACAGGGGTATGTGAGGGGTGGTGTTTATACCTTGTATATTCCATTCAAGGTATGGCCTTaGAAGTTTTCTGTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: AFKLQGYVRGGVYTLYIPFKVWP*KFSVPS
Trigger: TGAGGGAACAGAAAACTTCAAAGGCCATACCTTGAA...TGGAATATACAAGGTATAAACACCACCCCTCACATACCCCTGTAACTTAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCAATGGCCCTACAGTGTaGAGAAGATTCCACCTAGTA +
Preference number: 5 (lower is better)
Translates to: SSHITMAIFQTTFFALPPNGPTV*RRFHLV
Trigger: TACTAGGTGGAATCTTCTCAACACTGTAGGGCCATT...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTACTAAGGAGTAGTTTGTaGAGGGACACAGTTACCCTC +
Preference number: 5 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLLRSSL*RDTVTL
Trigger: GAGGGTAACTGTGTCCCTCAACAAACTACTCCTTAG...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTAGCACTAAGGAGTAGTTaGTTGAGGGACACAGTTACC +
Preference number: 5 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLALRSS*LRDTVT
Trigger: GGTAACTGTGTCCCTCAACAAACTACTCCTTAGTGC...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp AGTTCCCATATTACTATGGCAATATTTCAAACTACCTTCTTTGCACTACCACCCGTCATAGGGAGGATTTaGAAGCTGTTCTCTCGTGAA +
Preference number: 5 (lower is better)
Translates to: SSHITMAIFQTTFFALPPVIGRI*KLFSRE
Trigger: TTCACGAGAGAACAGCTTCAAAATCCTCCCTATGAC...GGGTGGTAGTGCAAAGAAGGTAGTTTGAAATATTGCCATAGTAATATGGGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTGTGATCACGGAGTCTTaGTGCTTCTTTCAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLVITES*CFFQAD
Trigger: ATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCAC...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTGATCCACTCAATTCGGAGTGTTaGCCAAGTTATTTCCTTAAA +
Preference number: 5 (lower is better)
Translates to: QSLTIVITESLCFFQADPLNSEC*PSYFLK
Trigger: TTTAAGGAAATAACTTGGCAAACACTCCGAATTGAG...TGGATCAGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTCTTTTCAAGGTATGGCCTTaGAAGTTTTCTGTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: QPKTFSVNYLVLCSKASLFKVWP*KFSVPS
Trigger: TGAGGGAACAGAAAACTTCAAAGGCCATACCTTGAA...AAGACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp ATTCTTTCCTCACTACCATTCAGTGTCATAGGGAGGATTTTGAAGCTGTTCTCTCAAATTGCTATGAGCTaGGTTCCTTTTCCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: ILSSLPFSVIGRILKLFSQIAMS*VPFPKK
Trigger: CTTTTTGGGAAAAGGAACCAAGCTCATAGCAATTTG...AGAGAACAGCTTCAAAATCCTCCCTATGACACTGAATGGTAGTGAGGAAAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTACATCCCCTGATAATTTaGGCTGTTCTCTGGACCTTT +
Preference number: 5 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLHPLII*AVLWTF
Trigger: AAAGGTCCAGAGAACAGCCAAAATTATCAGGGGATG...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CAAAGCCAGTCTTTGACTATTGTGATCACGGAGTCTTTGTGCTTCTTTCAAGCTCTCAGAATGTTGTTATaGCTATGTCTGCTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: QSQSLTIVITESLCFFQALRMLL*LCLLFK
Trigger: TTTGAACAGCAGACATAGCAATAACAACATTCTGAG...AGCTTGAAAGAAGCACAAAGACTCCGTGATCACAATAGTCAAAGACTGGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CTGCAGCCAAAAACTTTTTCTGTGAATTACTTGGTACTGTGTTCCAAAGCCAGTTTTTCTGTGAATTACTaGGTACTGTGTTCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LQPKTFSVNYLVLCSKASFSVNY*VLCSKA
Trigger: GGCTTTGGAACACAGTACCAAGTAATTCACAGAAAA...ACTGGCTTTGGAACACAGTACCAAGTAATTCACAGAAAAAGTTTTTGGCTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000452449.6
CDS-3UTR CAA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTAATCAACATTCTGCCTTaGAAAGAGGCACTAAGGAGT +
Preference number: 5 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLINILP*KEALRS
Trigger: ACTCCTTAGTGCCTCTTTCAAAGGCAGAATGTTGAT...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS-3UTR CAA 90 bp CTTCAGTATGGAAAGGTGAATGGTCGAGACTTTAGTAACATCACTAAGTTACTACTCAATTCGGAGTGTTaGCCAAGTTATTTCCTTAAA +
Preference number: 5 (lower is better)
Translates to: LQYGKVNGRDFSNITKLLLNSEC*PSYFLK
Trigger: TTTAAGGAAATAACTTGGCAAACACTCCGAATTGAG...TAGTAACTTAGTGATGTTACTAAAGTCTCGACCATTCACCTTTCCATACTGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS CCA 72 bp GGCCATGCCGGAGCCGCGGCCCGCGTGGAAGGCGGGTaGGCCGGCAGCTGTGGCCTCCTCAGTTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: GHAGAAARVEGG*AGSCGLLSCGE
Trigger: TTCTCCACAACTGAGGAGGCCACAGCTGCCGGCCCACCCGCCTTCCACGCGGGCCGCGGCTCCGGCATGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 90 bp GGCCCGCGTGGAAGGCGGGTGGGCCGGCAGCTGTGGCCTCCTCAGTaGTGGAGAAGAGGCGGTCCCCTCACCTCGCCGCGGCGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: GPRGRRVGRQLWPPQ*WRRGGPLTSPRREH
Trigger: GTGCTCACGCCGCGGCGAGGTGAGGGGACCGCCTCTTCTCCACAACTGAGGAGGCCACAGCTGCCGGCCCACCCGCCTTCCACGCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp CCCTCTGAGGCCAAAAGAAGCTTCCGTGCCTGGGCTTaGTGCCAGCGGAGGGGTAGGCAGGCCCAAATGGAC +
Preference number: 6 (lower is better)
Translates to: PSEAKRSFRAWA*CQRRGRQAQMD
Trigger: GTCCATTTGGGCCTGCCTACCCCTCCGCTGGCAGCAAGCCCAGGCACGGAAGCTTCTTTTGGCCTCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp TCCCACGGTGCCCAGCTGCTGGAGGGTCAGTTCCTCTaGTTGCAGGGCCACAGTCAGGTCCTCACCACGTAC +
Preference number: 6 (lower is better)
Translates to: SHGAQLLEGQFL*LQGHSQVLTTY
Trigger: GTACGTGGTGAGGACCTGACTGTGGCCCTGCAAGCAGAGGAACTGACCCTCCAGCAGCTGGGCACCGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 72 bp CACGGTGCCCAGCTGCTGGAGGGTCAGTTCCTCTGCTaGCAGGGCCACAGTCAGGTCCTCACCACGTACCTC +
Preference number: 6 (lower is better)
Translates to: HGAQLLEGQFLC*QGHSQVLTTYL
Trigger: GAGGTACGTGGTGAGGACCTGACTGTGGCCCTGCAAGCAGAGGAACTGACCCTCCAGCAGCTGGGCACCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp ACGGTGCCCAGCTGCTGGAGGGTCAGTTCCTCTGCTTaGAGGGCCACAGTCAGGTCCTCACCACGTACCTCA +
Preference number: 6 (lower is better)
Translates to: TVPSCWRVSSSA*RATVRSSPRTS
Trigger: TGAGGTACGTGGTGAGGACCTGACTGTGGCCCTGCAAGCAGAGGAACTGACCCTCCAGCAGCTGGGCACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp GGCACTGTCCATGCAGGAACTGCCAGAGTCCCACGGTaGCCAGCTGCTGGAGGGTCAGTTCCTCTGCTTGCA +
Preference number: 6 (lower is better)
Translates to: GTVHAGTARVPR*PAAGGSVPLLA
Trigger: TGCAAGCAGAGGAACTGACCCTCCAGCAGCTGGGCACCGTGGGACTCTGGCAGTTCCTGCATGGACAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 90 bp CCAGAGTCCCACGGTGCCCAGCTGCTGGAGGGTCAGTTCCTCTGCTaGCAGGGCCACAGTCAGGTCCTCACCACGTACCTCAATCCCAAA +
Preference number: 6 (lower is better)
Translates to: PESHGAQLLEGQFLC*QGHSQVLTTYLNPK
Trigger: TTTGGGATTGAGGTACGTGGTGAGGACCTGACTGTGGCCCTGCAAGCAGAGGAACTGACCCTCCAGCAGCTGGGCACCGTGGGACTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp AAATCGGAGTCGTGCAGCACCTCCACTCACTGGGGCTaGCACCCCCTCATCTGTCTTGGCCATGGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: KSESCSTSTHWG*HPLICLGHGLL
Trigger: AAGGAGCCCATGGCCAAGACAGATGAGGGGGTGGCAGCCCCAGTGAGTGGAGGTGCTGCACGACTCCGATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp TGGGCCCACTGGCCTCGGGTCTCCATGGCCTCACAGTaGCGTACCCAATGTTTGCAGCTATCACCTGCCCAA +
Preference number: 6 (lower is better)
Translates to: WAHWPRVSMASQ*RTQCLQLSPAQ
Trigger: TTGGGCAGGTGATAGCTGCAAACATTGGGTACGCCACTGTGAGGCCATGGAGACCCGAGGCCAGTGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp ATGGCCCTTCCCTGCCAGCTGCTGGGCAAGTGGACCTaGGTCCTGCAGTTCTCCATTGCTATGTGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: MALPCQLLGKWT*VLQFSIAMWPL
Trigger: GAGAGGCCACATAGCAATGGAGAACTGCAGGACTCAGGTCCACTTGCCCAGCAGCTGGCAGGGAAGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp GACTCTACTGCCTCATGGCCCTTCCCTGCCAGCTGCTaGGCAAGTGGACCTGAGTCCTGCAGTTCTCCATTG +
Preference number: 6 (lower is better)
Translates to: DSTASWPFPASC*ASGPESCSSPL
Trigger: CAATGGAGAACTGCAGGACTCAGGTCCACTTGCCCAGCAGCTGGCAGGGAAGGGCCATGAGGCAGTAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp GGATCCGGATGGAGGCCCTGTTGCAGTAGACCCGAGTaGTGGCTAACCAGGTGGGCAGCTCCAGTACATTCT +
Preference number: 6 (lower is better)
Translates to: GSGWRPCCSRPE*WLTRWAAPVHS
Trigger: AGAATGTACTGGAGCTGCCCACCTGGTTAGCCATCACTCGGGTCTACTGCAACAGGGCCTCCATCCGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp CTCATCCTCCAAGAAGGGCCCCAGGCCACTGAGCACTaGAGTGAGCAGCTCGAGGTCACAGCCATGAAGCAA +
Preference number: 6 (lower is better)
Translates to: LILQEGPQATEH*SEQLEVTAMKQ
Trigger: TTGCTTCATGGCTGTGACCTCGAGCTGCTCACTTCAGTGCTCAGTGGCCTGGGGCCCTTCTTGGAGGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp TTCCCTGCCAGCTGCTGGGCAAGTGGACCTGAGTCCTaGAGTTCTCCATTGCTATGTGGCCTCTCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: FPASCWASGPES*SSPLLCGLSWD
Trigger: ATCCCAGGAGAGGCCACATAGCAATGGAGAACTGCAGGACTCAGGTCCACTTGCCCAGCAGCTGGCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp GTGGCAATCATGCCTGACGCAGAGAAGACAAGGGCCTaGGGACGATGCAACTCTGCCCGCTCTCTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: VAIMPDAEKTRA*GRCNSARSLFS
Trigger: GGAAAAGAGAGAGCGGGCAGAGTTGCATCGTCCCCAGGCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 72 bp GCCATGGGCTCCTTGGCTGGGGGCAGGGACAACATCTaGTGCATGGTGGAGGTCATTCGATCTCTGCCCAAA +
Preference number: 6 (lower is better)
Translates to: AMGSLAGGRDNI*CMVEVIRSLPK
Trigger: TTTGGGCAGAGATCGAATGACCTCCACCATGCACAAGATGTTGTCCCTGCCCCCAGCCAAGGAGCCCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 90 bp TCTGTCTTGGCCATGGGCTCCTTGGCTGGGGGCAGGGACAACATCTaGTGCATGGTGGAGGTCATTCGATCTCTGCCCAAACTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: SVLAMGSLAGGRDNI*CMVEVIRSLPKLKA
Trigger: TGCCTTCAGTTTGGGCAGAGATCGAATGACCTCCACCATGCACAAGATGTTGTCCCTGCCCCCAGCCAAGGAGCCCATGGCCAAGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp ATGCCTGACGCAGAGAAGACAAGGGCCTGGGGACGATaGAACTCTGCCCGCTCTCTCTTTTCCAGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: MPDAEKTRAWGR*NSARSLFSSGK
Trigger: CTTTCCACTGGAAAAGAGAGAGCGGGCAGAGTTGCATCGTCCCCAGGCCCTTGTCTTCTCTGCGTCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp ATGGGCTCCTTGGCTGGGGGCAGGGACAACATCTTGTaGATGGTGGAGGTCATTCGATCTCTGCCCAAACTG +
Preference number: 6 (lower is better)
Translates to: MGSLAGGRDNIL*MVEVIRSLPKL
Trigger: CAGTTTGGGCAGAGATCGAATGACCTCCACCATGCACAAGATGTTGTCCCTGCCCCCAGCCAAGGAGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp ATGAGTCTGTTGGCAGAGACACCTGGCTCTCGGGACTaGCTATCATCACAAATGTGCAGGTCCAGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: MSLLAETPGSRD*LSSQMCRSRRE
Trigger: CTCCCGCCTGGACCTGCACATTTGTGATGATAGCCAGTCCCGAGAGCCAGGTGTCTCTGCCAACAGACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp CTTTCCTCCAAGACCTTCTCAGGGCTTGCTGGGCCCTaGTCTGATGAGGCATCAGACTTCAGTTCCCGATCC +
Preference number: 6 (lower is better)
Translates to: LSSKTFSGLAGP*SDEASDFSSRS
Trigger: GGATCGGGAACTGAAGTCTGATGCCTCATCAGACCAGGGCCCAGCAAGCCCTGAGAAGGTCTTGGAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp CTCACGCGGACATGGGCCGGGGAATGTACAAGCATATaGACATCTGCTACATCCTCCAGCTCTGTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: LTRTWAGECTSI*TSATSSSSVRG
Trigger: GCCTCTGACAGAGCTGGAGGATGTAGCAGATGTTCATATGCTTGTACATTCCCCGGCCCATGTCCGCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp GTGATCTGCACAGGTTCAGGGGCCAGGCTCTTTCTTTaGTGGGCTGACTTCTCCATGGCTTCACTCAGTGAC +
Preference number: 6 (lower is better)
Translates to: VICTGSGARLFL*WADFSMASLSD
Trigger: GTCACTGAGTGAAGCCATGGAGAAGTCAGCCCATCAAAGAAAGAGCCTGGCCCCTGAACCTGTGCAGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp ATGTGGAGCATGACGTGTATTGGTGGCAATCATGCCTaGCGCAGAGAAGACAAGGGCCTGGGGACGATGCAA +
Preference number: 6 (lower is better)
Translates to: MWSMTCIGGNHA*RREDKGLGTMQ
Trigger: TTGCATCGTCCCCAGGCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp GCAGAGCCACTTCAGCACTGGGAAAGAGAACTCCAATaGAAGCTGTCTGATTCTGCAGGGGAGACCCAGTCA +
Preference number: 6 (lower is better)
Translates to: AEPLQHWERELQ*KLSDSAGETQS
Trigger: TGACTGGGTCTCCCCTGCAGAATCAGACAGCTTGCATTGGAGTTCTCTTTCCCAGTGCTGAAGTGGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp TCCTTTAGGGTGATGCTGGAGTTCAGAAGCTCAATCTaGATGGGGACTACCACCGGGATCTCCTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: SFRVMLEFRSSI*MGTTTGISSSS
Trigger: GGAGGATGAGGAGATCCCGGTGGTAGTCCCCATGCAGATTGAGCTTCTGAACTCCAGCATCACCCTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp CCGACTGCAGGAAAGGAGTGTAGATGGCTTTTTACTTaGCTGTCCAGCGGTGGAAACCTGGTGGATGTCCAG +
Preference number: 6 (lower is better)
Translates to: PTAGKECRWLFT*LSSGGNLVDVQ
Trigger: CTGGACATCCACCAGGTTTCCACCGCTGGACAGCCAAGTAAAAAGCCATCTACACTCCTTTCCTGCAGTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp GCTATTGCTGGTGATAGCCTCTCTCCTTGGCACAGATaGCTGAGCCACTGGTTTCAGAGCTCAAAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: AIAGDSLSPWHR*LSHWFQSSKKG
Trigger: CCCCTTCTTTGAGCTCTGAAACCAGTGGCTCAGCCATCTGTGCCAAGGAGAGAGGCTATCACCAGCAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS TCA 72 bp TGTAGAACCTCTTCATCCAGCTCCAGGTTGGTCAGCTaGCCCTCCCCTTTCAGGGTGCTCAGGTTGATTTTG +
Preference number: 6 (lower is better)
Translates to: CRTSSSSSRLVS*PSPFRVLRLIL
Trigger: CAAAATCAACCTGAGCACCCTGAAAGGGGAGGGTCAGCTGACCAACCTGGAGCTGGATGAAGAGGTTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp TCTGCTTTTCTCCGAAAGAGAGAGTCTACTCCAAGGTaGCAGGGTGGTTTCAGACCCGTCTCTTCATGCCAC +
Preference number: 6 (lower is better)
Translates to: SAFLRKRESTPR*QGGFRPVSSCH
Trigger: GTGGCATGAAGAGACGGGTCTGAAACCACCCTGGCACCTTGGAGTAGACTCTCTCTTTCGGAGAAAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp TCTCCGAAAGAGAGAGTCTACTCCAAGGTGCCAGGGTaGTTTCAGACCCGTCTCTTCATGCCACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SPKERVYSKVPG*FQTRLFMPLLH
Trigger: ATGGAGAAGTGGCATGAAGAGACGGGTCTGAAACCACCCTGGCACCTTGGAGTAGACTCTCTCTTTCGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 72 bp AAACTGAAGGCATCCTTAGTCAGGGACACAGCTTCCTaGGTGAGGTCCATGGTGGCATGTAGAGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: KLKASLVRDTAS*VRSMVACRASL
Trigger: CAAGGAGGCTCTACATGCCACCATGGACCTCACCAAGGAAGCTGTGTCCCTGACTAAGGATGCCTTCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 90 bp TTCTCCATGGCTTCACTCAGTGACTCTGCATACTTCATCATAGCCTaGAGCTGTGAGTCAGTCAGCACCCAGAGCAGGTCATCCAACAGG +
Preference number: 6 (lower is better)
Translates to: FSMASLSDSAYFIIA*SCESVSTQSRSSNR
Trigger: CCTGTTGGATGACCTGCTCTGGGTGCTGACTGACTCACAGCTCAAGGCTATGATGAAGTATGCAGAGTCACTGAGTGAAGCCATGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp CACTTGACAATTCTCCCTCAATGTTCTTCAAGGGGATaGGCTCACCCTGTCCATTCACAGCAGTCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: HLTILPQCSSRG*AHPVHSQQSPC
Trigger: GCAGGGAGACTGCTGTGAATGGACAGGGTGAGCTCATCCCCTTGAAGAACATTGAGGGAGAATTGTCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp TTGCTGGTGATAGCCTCTCTCCTTGGCACAGATGGCTaGGCCACTGGTTTCAGAGCTCAAAGAAGGGGTTAT +
Preference number: 6 (lower is better)
Translates to: LLVIASLLGTDG*ATGFRAQRRGY
Trigger: ATAACCCCTTCTTTGAGCTCTGAAACCAGTGGCTCAGCCATCTGTGCCAAGGAGAGAGGCTATCACCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000192788.6
CDS CCA 72 bp GCCTTGGTTCGTAATAAGCCTCAATGGAGTGGTGACTaGGTCCTGATCACCATTGTCTGTAGCATCTGCCTC +
Preference number: 6 (lower is better)
Translates to: ALVRNKPQWSGD*VLITIVCSICL
Trigger: GAGGCAGATGCTACAGACAATGGTGATCAGGACCCAGTCACCACTCCATTGAGGCTTATTACGAACCAAGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp AAGCTTTTCAAGTCATGTTCAGTCTTTGACCGCGGATaGGACATAGAGTCAGGGGCAAGAGCCTCAGACTGG +
Preference number: 6 (lower is better)
Translates to: KLFKSCSVFDRG*DIESGARASDW
Trigger: CCAGTCTGAGGCTCTTGCCCCTGACTCTATGTCCCATCCGCGGTCAAAGACTGAACATGACTTGAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp AGACTCTGGAGGTCTGAACAACTACAATGTGGAGCATaGCGTGTATTGGTGGCAATCATGCCTGACGCAGAG +
Preference number: 6 (lower is better)
Translates to: RLWRSEQLQCGA*RVLVAIMPDAE
Trigger: CTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGTTCAGACCTCCAGAGTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp AGCAGCAGCAAAACCCCGGAAGAGACTCTGGAGGTCTaGACAACTACAATGTGGAGCATGACGTGTATTGGT +
Preference number: 6 (lower is better)
Translates to: SSSKTPEETLEV*TTTMWSMTCIG
Trigger: ACCAATACACGTCATGCTCCACATTGTAGTTGTTCAGACCTCCAGAGTCTCTTCCGGGGTTTTGCTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp GTTGTGAAGTTTCCGACTGCAGGAAAGGAGTGTAGATaGCTTTTTACTTGGCTGTCCAGCGGTGGAAACCTG +
Preference number: 6 (lower is better)
Translates to: VVKFPTAGKECR*LFTWLSSGGNL
Trigger: CAGGTTTCCACCGCTGGACAGCCAAGTAAAAAGCCATCTACACTCCTTTCCTGCAGTCGGAAACTTCACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp CTGAACAACTACAATGTGGAGCATGACGTGTATTGGTaGCAATCATGCCTGACGCAGAGAAGACAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: LNNYNVEHDVYW*QSCLTQRRQGP
Trigger: AGGCCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp GGTCTGAACAACTACAATGTGGAGCATGACGTGTATTaGTGGCAATCATGCCTGACGCAGAGAAGACAAGGG +
Preference number: 6 (lower is better)
Translates to: GLNNYNVEHDVY*WQSCLTQRRQG
Trigger: CCCTTGTCTTCTCTGCGTCAGGCATGATTGCCACCAATACACGTCATGCTCCACATTGTAGTTGTTCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp TTCGTAATAAGCCTCAATGGAGTGGTGACTGGGTCCTaGTCACCATTGTCTGTAGCATCTGCCTCAATTCGG +
Preference number: 6 (lower is better)
Translates to: FVISLNGVVTGS*SPLSVASASIR
Trigger: CCGAATTGAGGCAGATGCTACAGACAATGGTGATCAGGACCCAGTCACCACTCCATTGAGGCTTATTACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp GGCTATCATCACAAATGTGCAGGTCCAGGCGGGAGATaGGCAGATGGTAGGAGGACTCTTTCACATCAAATT +
Preference number: 6 (lower is better)
Translates to: GYHHKCAGPGGR*ADGRRTLSHQI
Trigger: AATTTGATGTGAAAGAGTCCTCCTACCATCTGCTCATCTCCCGCCTGGACCTGCACATTTGTGATGATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp GAGAGGGGCTTCTCTCAAGAGGGTTCTTTCGAGGACTaGAAAGAGAATCTGCTTTTCTCCGAAAGAGAGAGT +
Preference number: 6 (lower is better)
Translates to: ERGFSQEGSFED*KENLLFSERES
Trigger: ACTCTCTCTTTCGGAGAAAAGCAGATTCTCTTTCCAGTCCTCGAAAGAACCCTCTTGAGAGAAGCCCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CCA 72 bp CACCATCAAATGACTGTTGAGATACCGTCCTCTTCATaGAGAAAAATCGGAGTCGTGCAGCACCTCCACTCA +
Preference number: 6 (lower is better)
Translates to: HHQMTVEIPSSS*RKIGVVQHLHS
Trigger: TGAGTGGAGGTGCTGCACGACTCCGATTTTTCTCCATGAAGAGGACGGTATCTCAACAGTCATTTGATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 72 bp GAGGGCTCCCTTGAACACCAGCATTATCTGAGACATTaGAAAGAGATCCTGGTGGAACAGATTCTGGACCAG +
Preference number: 6 (lower is better)
Translates to: EGSLEHQHYLRH*KEILVEQILDQ
Trigger: CTGGTCCAGAATCTGTTCCACCAGGATCTCTTTCAAATGTCTCAGATAATGCTGGTGTTCAAGGGAGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 90 bp GAGTCAGTCAGCACCCAGAGCAGGTCATCCAACAGGAACATCAGCTaGGAGGATATCACATTGCAATCTTTGGTTCTTCTTTTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: ESVSTQSRSSNRNIS*EDITLQSLVLLLRA
Trigger: AGCCCTCAAAAGAAGAACCAAAGATTGCAATGTGATATCCTCCAAGCTGATGTTCCTGTTGGATGACCTGCTCTGGGTGCTGACTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp GCATGTAGAGCCTCCTTGGTGGCATCCTTGGTCATGTaGATAGCACTTGACAATTCTCCCTCAATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: ACRASLVASLVM*IALDNSPSMFF
Trigger: GAAGAACATTGAGGGAGAATTGTCAAGTGCTATTCACATGACCAAGGATGCCACCAAGGAGGCTCTACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS GCA 72 bp GGTGACTGGGTCCTGATCACCATTGTCTGTAGCATCTaGCTCAATTCGGAGTGTTTGCCAAGTTATTTCCTT +
Preference number: 6 (lower is better)
Translates to: GDWVLITIVCSI*LNSECLPSYFL
Trigger: AAGGAAATAACTTGGCAAACACTCCGAATTGAGGCAGATGCTACAGACAATGGTGATCAGGACCCAGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 72 bp ACATCTGCTACATCCTCCAGCTCTGTCAGAGGCCCTTaGTTGTCCATACCACTACTGCCTTCTTTCAGAATT +
Preference number: 6 (lower is better)
Translates to: TSATSSSSVRGP*LSIPLLPSFRI
Trigger: AATTCTGAAAGAAGGCAGTAGTGGTATGGACAACAAAGGGCCTCTGACAGAGCTGGAGGATGTAGCAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 90 bp ATTGCAATCTTTGGTTCTTCTTTTGAGGGCTATTTGGATCCTGCCTaGGTTCGTAATAAGCCTCAATGGAGTGGTGACTGGGTCCTGATC +
Preference number: 6 (lower is better)
Translates to: IAIFGSSFEGYLDPA*VRNKPQWSGDWVLI
Trigger: GATCAGGACCCAGTCACCACTCCATTGAGGCTTATTACGAACCAAGGCAGGATCCAAATAGCCCTCAAAAGAAGAACCAAAGATTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 90 bp TATTCACAAGAGGGCTCCCTTGAACACCAGCATTATCTGAGACATTaGAAAGAGATCCTGGTGGAACAGATTCTGGACCAGACTCAGACT +
Preference number: 6 (lower is better)
Translates to: YSQEGSLEHQHYLRH*KEILVEQILDQTQT
Trigger: AGTCTGAGTCTGGTCCAGAATCTGTTCCACCAGGATCTCTTTCAAATGTCTCAGATAATGCTGGTGTTCAAGGGAGCCCTCTTGTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp TCTCCATTGCTATGTGGCCTCTCCTGGGATACATCCTaGTTTTCAATGCTACTTTCCTCCAAGACCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SPLLCGLSWDTS*FSMLLSSKTFS
Trigger: TGAGAAGGTCTTGGAGGAAAGTAGCATTGAAAATCAGGATGTATCCCAGGAGAGGCCACATAGCAATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS CAA 72 bp AGCACCCAGAGCAGGTCATCCAACAGGAACATCAGCTaGGAGGATATCACATTGCAATCTTTGGTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: STQSRSSNRNIS*EDITLQSLVLL
Trigger: AAGAAGAACCAAAGATTGCAATGTGATATCCTCCAAGCTGATGTTCCTGTTGGATGACCTGCTCTGGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6
CDS TCA 72 bp CCACTGCTATCCAATGAGACACCATCAAATGACTGTTaGGATACCGTCCTCTTCATGGAGAAAAATCGGAGT +
Preference number: 6 (lower is better)
Translates to: PLLSNETPSNDC*DTVLFMEKNRS
Trigger: ACTCCGATTTTTCTCCATGAAGAGGACGGTATCTCAACAGTCATTTGATGGTGTCTCATTGGATAGCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000192788.6
ENST00000452449.6