RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UHMK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000152332

Ensembl transcript IDs: ENST00000282169.8, ENST00000489294.2, ENST00000538489.5, ENST00000545294.5

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTAAAACCCCTCAATGTATAGCTGAGAGGTCTTGTCCTACTCAGTaGCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTGCAC +
Preference number: 1 (lower is better)
Translates to: SKTPQCIAERSCPTQ*QMYATQSLLGQWLH
Trigger: GTGCAGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAAGACCTCTCAGCTATACATTGAGGGGTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 90 bp TCTAACTGGACTCTCAGCAACCTGCATGGCAAACATAAGGAAATATaGGGAGGCTTCCAGCAGGGAAAGATAGAAGACTTTTTCCTTAGG +
Preference number: 1 (lower is better)
Translates to: SNWTLSNLHGKHKEI*GGFQQGKIEDFFLR
Trigger: CCTAAGGAAAAAGTCTTCTATCTTTCCCTGCTGGAAGCCTCCTCATATTTCCTTATGTTTGCCATGCAGGTTGCTGAGAGTCCAGTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR CCA 90 bp ATCTACACCTTTCTTAACTACCTTGCAGTCAAAAGCCAAACTACCTaGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCA +
Preference number: 1 (lower is better)
Translates to: IYTFLNYLAVKSQTT*DAAPLVCLQLRIEA
Trigger: TGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGTAGTTTGGCTTTTGACTGCAAGGTAGTTAAGAAAGGTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR CCA 90 bp TTTCTGGGTGTACAATGTGCCACAGTAATACCCCAAAGAAGTAACTaGGAAGGTGAGAGGCAAGGAAGCACAGGTATTAATTTAGGGAAT +
Preference number: 1 (lower is better)
Translates to: FLGVQCATVIPQRSN*EGERQGSTGINLGN
Trigger: ATTCCCTAAATTAATACCTGTGCTTCCTTGCCTCTCACCTTCCCAGTTACTTCTTTGGGGTATTACTGTGGCACATTGTACACCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 90 bp CCCAAGAAATGGAAGAGGAGAAAAAGGAAACAGTCCTTAGGTTACTaGTTAAAGCAAGGTTTGATACAGATATCCCCTCTTGTAGGCACT +
Preference number: 1 (lower is better)
Translates to: PKKWKRRKRKQSLGY*LKQGLIQISPLVGT
Trigger: AGTGCCTACAAGAGGGGATATCTGTATCAAACCTTGCTTTAATCAGTAACCTAAGGACTGTTTCCTTTTTCTCCTCTTCCATTTCTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538489.5
3UTR GCA 90 bp ATTTCATTCTGTAAAATGCAAATTCTAACTGGACTCTCAGCAACCTaGATGGCAAACATAAGGAAATATGAGGAGGCTTCCAGCAGGGAA +
Preference number: 1 (lower is better)
Translates to: ISFCKMQILTGLSAT*MANIRKYEEASSRE
Trigger: TTCCCTGCTGGAAGCCTCCTCATATTTCCTTATGTTTGCCATGCAGGTTGCTGAGAGTCCAGTTAGAATTTGCATTTTACAGAATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 90 bp GGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAATTCTaGCTTGAAAACAAACCAATTTATAATCAACTCCTGAAAGGGCCA +
Preference number: 1 (lower is better)
Translates to: GKFRSSQYGFCPLEF*LENKPIYNQLLKGP
Trigger: TGGCCCTTTCAGGAGTTGATTATAAATTGGTTTGTTTTCAAGTCAGAATTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 90 bp TTTAAGAAAGATAATATCACAGGAGGGAGGGGTAATCTGCTAATGTaGTCTTTGGTAGAACGGGCTAAGAGCTATAAAATAATTTCAATC +
Preference number: 1 (lower is better)
Translates to: FKKDNITGGRGNLLM*SLVERAKSYKIISI
Trigger: GATTGAAATTATTTTATAGCTCTTAGCCCGTTCTACCAAAGATCACATTAGCAGATTACCCCTCCCTCCTGTGATATTATCTTTCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR GCA 90 bp AAATATATGTATGAATGTATCAGCAATAAGATGACAATCAAAGAATaGTGTGAAGATTGGCATCAAGATGTTAGCAGCATACTGCAGGAC +
Preference number: 1 (lower is better)
Translates to: KYMYECISNKMTIKE*CEDWHQDVSSILQD
Trigger: GTCCTGCAGTATGCTGCTAACATCTTGATGCCAATCTTCACAGCATTCTTTGATTGTCATCTTATTGCTGATACATTCATACATATATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGTCTAAGGGCATGTATTaGGGAACATGCCACAAGACC +
Preference number: 2 (lower is better)
Translates to: ATGEAETGESLKPARQRLSKGMY*GTCHKT
Trigger: GGTCTTGTGGCATGTTCCCCAATACATGCCCTTAGA...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGACTGAGAGCATCCAGTaGCAGCTTATGGATATCAAC +
Preference number: 2 (lower is better)
Translates to: ATGEAETGESLKPARQRLTESIQ*QLMDIN
Trigger: GTTGATATCCATAAGCTGGCACTGGATGCTCTCAGT...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGAACTACCTGGGATGCTaGTCCTCTAGTTTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: ATGEAETGESLKPARQRLNYLGC*SSSLSS
Trigger: TGAAGACAAACTAGAGGAGCAGCATCCCAGGTAGTT...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGTCACTGCTTGGGCAATaGCTGCACATTAGTAGGATT +
Preference number: 2 (lower is better)
Translates to: ATGEAETGESLKPARQRLSLLGQ*LHISRI
Trigger: AATCCTACTAATGTGCAGCCATTGCCCAAGCAGTGA...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGGACTCCAGTTTGTTCTaGGCCTCTCAGGAATTATGT +
Preference number: 2 (lower is better)
Translates to: ATGEAETGESLKPARQRLDSSLF*ASQELC
Trigger: ACATAATTCCTGAGAGGCCCAGAACAAACTGGAGTC...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGATGCAACGCAGTCACTaGTTGGGCAATGGCTGCACA +
Preference number: 2 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMMQRSH*LGNGCT
Trigger: TGTGCAGCCATTGCCCAAGCAGTGACTGCGTTGCAT...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAATGCTGTCTCTTACTaGGGTGTCCAACTCTACTTG +
Preference number: 2 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVNAVSY*GVQLYL
Trigger: CAAGTAGAGTTGGACACCTCAGTAAGAGACAGCATT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGTCTGGGTGTACAATGTaGCACAGTAATACCCCAAAG +
Preference number: 2 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVSGCTM*HSNTPK
Trigger: CTTTGGGGTATTACTGTGGCACATTGTACACCCAGA...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGTGTATGTGCCTTTTCTaGGTGTACAATGTGCCACAG +
Preference number: 2 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVCMCLF*VYNVPQ
Trigger: CTGTGGCACATTGTACACCCAGAAAAGGCACATACA...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAGGGTAGGGGTTAAGTaGCATGAACCCTCACCTCTT +
Preference number: 2 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPRVGVK*HEPSPL
Trigger: AAGAGGTGAGGGTTCATGTCACTTAACCCCTACCCT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATCCAGTCAGTAATTTCTaGGCAGCTTTGGAATCACCA +
Preference number: 2 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNPVSNF*AALESP
Trigger: TGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGG...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
3UTR-3UTR CCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCCCCAAAGAAGTAACTaGGAAGGTGAGAGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWPQRSN*EGERQG
Trigger: TCCTTGCCTCTCACCTTCCCAGTTACTTCTTTGGGG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCCCTCAATGTATAGCTaGGAGGTCTTGTCCTACTCA +
Preference number: 2 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWPSMYS*EVLSYS
Trigger: TGAGTAGGACAAGACCTCTCAGCTATACATTGAGGG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGTGCTTGGGCAATGGCTaGACATTAGTAGGATTAAAT +
Preference number: 2 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVCLGNG*TLVGLN
Trigger: ATTTAATCCTACTAATGTGCAGCCATTGCCCAAGCA...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAATGCAACGCAGTCACTaGTTGGGCAATGGCTGCACA +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEMQRSH*LGNGCT
Trigger: TGTGCAGCCATTGCCCAAGCAGTGACTGCGTTGCAT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGGGTTGCCCACATGGATaGTCTAAAACCCCTCAATGT +
Preference number: 2 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPGCPHG*SKTPQC
Trigger: ACATTGAGGGGTTTTAGAGCATCCATGTGGGCAACC...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGCCAAACTACCTGGGATaGTGCTCCTCTAGTTTGTCT +
Preference number: 2 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPPNYLG*CSSSLS
Trigger: AGACAAACTAGAGGAGCAGCATCCCAGGTAGTTTGG...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGTCCAGTGCCAGCTTATaGATATCAACAATAAGGAAG +
Preference number: 2 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVSSASL*ISTIRK
Trigger: CTTCCTTATTGTTGATATCCATAAGCTGGCACTGGA...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTCTAAGGGCATGTATTaGGGAACATGCCACAAGACC +
Preference number: 2 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPSKGMY*GTCHKT
Trigger: GGTCTTGTGGCATGTTCCCCAATACATGCCCTTAGA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAAACATAAGGAAATATaGGGAGGCTTCCAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPKHKEI*GGFQQG
Trigger: TCCCTGCTGGAAGCCTCCTCATATTTCCTTATGTTT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAATCAAAGAATGCTGTaGAGATTGGCATCAAGATGT +
Preference number: 2 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVNQRML*RLASRC
Trigger: ACATCTTGATGCCAATCTTCACAGCATTCTTTGATT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGGGTAATCTGCTAATGTaGTCTTTGGTAGAACGGGCT +
Preference number: 2 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPGNLLM*SLVERA
Trigger: AGCCCGTTCTACCAAAGATCACATTAGCAGATTACC...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTCTTGTCCTACTCAGTaGCAAATGTATGCAACGCAG +
Preference number: 2 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPSCPTQ*QMYATQ
Trigger: CTGCGTTGCATACATTTGGCACTGAGTAGGACAAGA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGATGTTAGCAGCATACTaGAGGACTAGGCTTAGAAGC +
Preference number: 2 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWMLAAY*RTRLRS
Trigger: GCTTCTAAGCCTAGTCCTGCAGTATGCTGCTAACAT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATTCCAGTGCCAGCTTATaGATATCAACAATAAGGAAG +
Preference number: 2 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNSSASL*ISTIRK
Trigger: CTTCCTTATTGTTGATATCCATAAGCTGGCACTGGA...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAACCCTCAATGTATAGCTaGGAGGTCTTGTCCTACTCA +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKPSMYS*EVLSYS
Trigger: TGAGTAGGACAAGACCTCTCAGCTATACATTGAGGG...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAACCCTCAATGTATAGCTaGGAGGTCTTGTCCTACTCA +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEPSMYS*EVLSYS
Trigger: TGAGTAGGACAAGACCTCTCAGCTATACATTGAGGG...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCTCAAAGTCATGATGTaGTTCCAATGTACCCGAATC +
Preference number: 2 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWLKVMM*FQCTRI
Trigger: GATTCGGGTACATTGGAATCACATCATGACTTTGAG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGTCAGACTCAAAGTCATaGTGTGATTCCAATGTACCC +
Preference number: 2 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWSDSKS*CDSNVP
Trigger: GGGTACATTGGAATCACATCATGACTTTGAGTCTGA...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTTCAGTGCCAAATGTATaGAACGCAGTCACTGCTTGG +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFSVPNV*NAVTAW
Trigger: CCAAGCAGTGACTGCGTTGCATACATTTGGCACTGA...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTGGTTGCCCACATGGATaGTCTAAAACCCCTCAATGT +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFGCPHG*SKTPQC
Trigger: ACATTGAGGGGTTTTAGAGCATCCATGTGGGCAACC...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAACCAAACTACCTGGGATaGTGCTCCTCTAGTTTGTCT +
Preference number: 2 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEPNYLG*CSSSLS
Trigger: AGACAAACTAGAGGAGCAGCATCCCAGGTAGTTTGG...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGATGACAATCAAAGAATaGTGTGAAGATTGGCATCAA +
Preference number: 2 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVMTIKE*CEDWHQ
Trigger: TTGATGCCAATCTTCACAGCATTCTTTGATTGTCAT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAATAATCACTGTATGTaGCTTTTCTGGGTGTACAAT +
Preference number: 2 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVNNHCM*LFWVYN
Trigger: ATTGTACACCCAGAAAAGGCACATACAGTGATTATT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAATCTAAGGGCATGTATTaGGGAACATGCCACAAGACC +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAESKGMY*GTCHKT
Trigger: GGTCTTGTGGCATGTTCCCCAATACATGCCCTTAGA...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAAAACATAAGGAAATATaGGGAGGCTTCCAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEKHKEI*GGFQQG
Trigger: TCCCTGCTGGAAGCCTCCTCATATTTCCTTATGTTT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAGGTAATCTGCTAATGTaGTCTTTGGTAGAACGGGCT +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEGNLLM*SLVERA
Trigger: AGCCCGTTCTACCAAAGATCACATTAGCAGATTACC...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTAATGCTGTCTCTTACTaGGGTGTCCAACTCTACTTG +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFNAVSY*GVQLYL
Trigger: CAAGTAGAGTTGGACACCTCAGTAAGAGACAGCATT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAATGCCCTTACCAGAGTaGAGGTCCAGTGTAATAAGA +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKMPLPE*RSSVIR
Trigger: TCTTATTACACTGGACCTTCACTCTGGTAAGGGCAT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAATCTTGTCCTACTCAGTaGCAAATGTATGCAACGCAG +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKSCPTQ*QMYATQ
Trigger: CTGCGTTGCATACATTTGGCACTGAGTAGGACAAGA...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTACTGAGAGCATCCAGTaGCAGCTTATGGATATCAAC +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFTESIQ*QLMDIN
Trigger: GTTGATATCCATAAGCTGGCACTGGATGCTCTCAGT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAAACTACCTGGGATGCTaGTCCTCTAGTTTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKNYLGC*SSSLSS
Trigger: TGAAGACAAACTAGAGGAGCAGCATCCCAGGTAGTT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTGGACTCTCAGCAACCTaGATGGCAAACATAAGGAAA +
Preference number: 2 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIGLSAT*MANIRK
Trigger: TTTCCTTATGTTTGCCATGCAGGTTGCTGAGAGTCC...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAATGTTAGCAGCATACTaGAGGACTAGGCTTAGAAGC +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEMLAAY*RTRLRS
Trigger: GCTTCTAAGCCTAGTCCTGCAGTATGCTGCTAACAT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTTCTGGGTGTACAATGTaGCACAGTAATACCCCAAAG +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFSGCTM*HSNTPK
Trigger: CTTTGGGGTATTACTGTGGCACATTGTACACCCAGA...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAATCTGGGTGTACAATGTaGCACAGTAATACCCCAAAG +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKSGCTM*HSNTPK
Trigger: CTTTGGGGTATTACTGTGGCACATTGTACACCCAGA...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTCCCTCTAAAGAGAGCTaGTATATTGGTGGCCACAAA +
Preference number: 2 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIPSKES*YIGGHK
Trigger: TTTGTGGCCACCAATATAGCAGCTCTCTTTAGAGGG...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAACCCTCTAAAGAGAGCTaGTATATTGGTGGCCACAAA +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEPSKES*YIGGHK
Trigger: TTTGTGGCCACCAATATAGCAGCTCTCTTTAGAGGG...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGATACCTCACTACATTTaGTCTTATACCCTCACTGTC +
Preference number: 2 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWIPHYI*SYTLTV
Trigger: GACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTAT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTTCACTGCTTGGGCAATaGCTGCACATTAGTAGGATT +
Preference number: 2 (lower is better)
Translates to: SVSPTPSPSNYVVTITIISLLGQ*LHISRI
Trigger: AATCCTACTAATGTGCAGCCATTGCCCAAGCAGTGA...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTGACTCCAGTTTGTTCTaGGCCTCTCAGGAATTATGT +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFDSSLF*ASQELC
Trigger: ACATAATTCCTGAGAGGCCCAGAACAAACTGGAGTC...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAGACTCCAGTTTGTTCTaGGCCTCTCAGGAATTATGT +
Preference number: 2 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEDSSLF*ASQELC
Trigger: ACATAATTCCTGAGAGGCCCAGAACAAACTGGAGTC...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTTGTATGTGCCTTTTCTaGGTGTACAATGTGCCACAG +
Preference number: 2 (lower is better)
Translates to: SVSPTPSPSNYVVTITIICMCLF*VYNVPQ
Trigger: CTGTGGCACATTGTACACCCAGAAAAGGCACATACA...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTGCACTCTTTAGCAGCTaGAGTACCAAAAAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFALFSS*STKKKA
Trigger: TGCCTTCTTTTTGGTACTCCAGCTGCTAAAGAGTGC...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTTCAGACTCAAAGTCATaGTGTGATTCCAATGTACCC +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFSDSKS*CDSNVP
Trigger: GGGTACATTGGAATCACATCATGACTTTGAGTCTGA...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGATCCATGTTCTTCTGTaGTTAAGAATGGGACTTATC +
Preference number: 2 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWIHVLL*LRMGLI
Trigger: GATAAGTCCCATTCTTAATCACAGAAGAACATGGAT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGTTGGTAAGTTTCCCATaGATTTCAGCATTTACAGTG +
Preference number: 2 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWLVSFP*ISAFTV
Trigger: CACTGTAAATGCTGAAATTCATGGGAAACTTACCAA...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTCCTGCATTCATATGTaGAATAACCCAAGAAATGGA +
Preference number: 2 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPSCIHM*NNPRNG
Trigger: TCCATTTCTTGGGTTATTCCACATATGAATGCAGGA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAATTTCTGCGCAGCTTTaGAATCACCAGCATTTGCAT +
Preference number: 2 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEISAQL*NHQHLH
Trigger: ATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAAT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
3UTR-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAACAGCATCTGATAAGTaGTCTAACTCCGCCTTTTAT +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKTASDK*SNSAFY
Trigger: ATAAAAGGCGGAGTTAGAGCACTTATCAGATGCTGT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTACAGCATCTGATAAGTaGTCTAACTCCGCCTTTTAT +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFTASDK*SNSAFY
Trigger: ATAAAAGGCGGAGTTAGAGCACTTATCAGATGCTGT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTAATGCAAATTCTAACTaGACTCTCAGCAACCTGCAT +
Preference number: 2 (lower is better)
Translates to: SVSPTPSPSNYVVTITIINANSN*TLSNLH
Trigger: ATGCAGGTTGCTGAGAGTCCAGTTAGAATTTGCATT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAAATGCAAATTCTAACTaGACTCTCAGCAACCTGCAT +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAENANSN*TLSNLH
Trigger: ATGCAGGTTGCTGAGAGTCCAGTTAGAATTTGCATT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAAATGCAAATTCTAACTaGACTCTCAGCAACCTGCAT +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKNANSN*TLSNLH
Trigger: ATGCAGGTTGCTGAGAGTCCAGTTAGAATTTGCATT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAATGCCCACTTGAATTCTaGCTTGAAAACAAACCAATT +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAECPLEF*LENKPI
Trigger: AATTGGTTTGTTTTCAAGTCAGAATTCAAGTGGGCA...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAATGCCCACTTGAATTCTaGCTTGAAAACAAACCAATT +
Preference number: 2 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLECPLEF*LENKPI
Trigger: AATTGGTTTGTTTTCAAGTCAGAATTCAAGTGGGCA...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAGTATCAGCAATAAGATaGCAATCAAAGAATGCTGTG +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEVSAIR*QSKNAV
Trigger: CACAGCATTCTTTGATTGTCATCTTATTGCTGATAC...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAACAGTCCTTAGGTTACTaGTTAAAGCAAGGTTTGATA +
Preference number: 2 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEQSLGY*LKQGLI
Trigger: TATCAAACCTTGCTTTAATCAGTAACCTAAGGACTG...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
3UTR-3UTR GCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCATGCTTGGGCAATGGCTaGACATTAGTAGGATTAAAT +
Preference number: 2 (lower is better)
Translates to: SYGCETGREEISIDCISSCLGNG*TLVGLN
Trigger: ATTTAATCCTACTAATGTGCAGCCATTGCCCAAGCA...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTTCCAGTGGTAATAAATaGGGATCTCTTATTGCAAGA +
Preference number: 2 (lower is better)
Translates to: SVSPTPSPSNYVVTITIISSGNK*GSLIAR
Trigger: TCTTGCAATAAGAGATCCGCATTTATTACCACTGGA...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTTCCAGTGGTAATAAATaGGGATCTCTTATTGCAAGA +
Preference number: 2 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFSSGNK*GSLIAR
Trigger: TCTTGCAATAAGAGATCCGCATTTATTACCACTGGA...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAATCCTGCATTCATATGTaGAATAACCCAAGAAATGGA +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKSCIHM*NNPRNG
Trigger: TCCATTTCTTGGGTTATTCCACATATGAATGCAGGA...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCATCCAGTGCCAGCTTATaGATATCAACAATAAGGAAG +
Preference number: 2 (lower is better)
Translates to: SYGCETGREEISIDCISSSSASL*ISTIRK
Trigger: CTTCCTTATTGTTGATATCCATAAGCTGGCACTGGA...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAATGACAATCAAAGAATaGTGTGAAGATTGGCATCAA +
Preference number: 2 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEMTIKE*CEDWHQ
Trigger: TTGATGCCAATCTTCACAGCATTCTTTGATTGTCAT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAAATAATCACTGTATGTaGCTTTTCTGGGTGTACAAT +
Preference number: 2 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKNNHCM*LFWVYN
Trigger: ATTGTACACCCAGAAAAGGCACATACAGTGATTATT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCATCCTGCATTCATATGTaGAATAACCCAAGAAATGGA +
Preference number: 2 (lower is better)
Translates to: SYGCETGREEISIDCISSSCIHM*NNPRNG
Trigger: TCCATTTCTTGGGTTATTCCACATATGAATGCAGGA...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 72 bp GTGGCAAGCGCCTGTAAACCCAGCTACTGGGGAGGCTaGGACAGGAGAATCGCTCAAACCTGCGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: VASACKPSYWGG*DRRIAQTCEAE
Trigger: CTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGCTGGGTTTACAGGCGCTTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATCAACGCAGTCACTGCTaGGGCAATGGCTGCACATTA +
Preference number: 3 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNQRSHC*GNGCTL
Trigger: TAATGTGCAGCCATTGCCCAAGCAGTGACTGCGTTG...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR GCA 72 bp CCTCAATGTATAGCTGAGAGGTCTTGTCCTACTCAGTaGCAAATGTATGCAACGCAGTCACTGCTTGGGCAA +
Preference number: 3 (lower is better)
Translates to: PQCIAERSCPTQ*QMYATQSLLGQ
Trigger: TTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAAGACCTCTCAGCTATACATTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCAACGCAGTCACTGCTaGGGCAATGGCTGCACATTA +
Preference number: 3 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWQRSHC*GNGCTL
Trigger: TAATGTGCAGCCATTGCCCAAGCAGTGACTGCGTTG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGTGCTGCTCCTCTAGTTaGTCTTCAGCTAAGGATAGA +
Preference number: 3 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMCCSSS*SSAKDR
Trigger: TCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCA...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR GCA 72 bp GTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTaGTTGGGCAATGGCTGCACATTAGTAGGATTAAAT +
Preference number: 3 (lower is better)
Translates to: VLLSAKCMQRSH*LGNGCTLVGLN
Trigger: ATTTAATCCTACTAATGTGCAGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR GCA 72 bp GCTGTGAAGATTGGCATCAAGATGTTAGCAGCATACTaGAGGACTAGGCTTAGAAGCCTACCTGCAGTTTAT +
Preference number: 3 (lower is better)
Translates to: AVKIGIKMLAAY*RTRLRSLPAVY
Trigger: ATAAACTGCAGGTAGGCTTCTAAGCCTAGTCCTGCAGTATGCTGCTAACATCTTGATGCCAATCTTCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGAAACTAAAAGAGGGGTaGATTTACATCTGGCACAAC +
Preference number: 3 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMKLKEG*IYIWHN
Trigger: GTTGTGCCAGATGTAAATCAACCCCTCTTTTAGTTT...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 72 bp ACTCTCAGCAACCTGCATGGCAAACATAAGGAAATATaGGGAGGCTTCCAGCAGGGAAAGATAGAAGACTTT +
Preference number: 3 (lower is better)
Translates to: TLSNLHGKHKEI*GGFQQGKIEDF
Trigger: AAAGTCTTCTATCTTTCCCTGCTGGAAGCCTCCTCATATTTCCTTATGTTTGCCATGCAGGTTGCTGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATGTTTTGTCATTTACATaGTATCAGACAGACTACCTC +
Preference number: 3 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNVLSFT*YQTDYL
Trigger: GAGGTAGTCTGTCTGATACAATGTAAATGACAAAAC...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGATGCCACAAGACCCTTaGGTAATTCATAAATCAGCC +
Preference number: 3 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWMPQDP*VIHKSA
Trigger: GGCTGATTTATGAATTACCAAAGGGTCTTGTGGCAT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR GCA 72 bp TGTAAAATGCAAATTCTAACTGGACTCTCAGCAACCTaGATGGCAAACATAAGGAAATATGAGGAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: CKMQILTGLSAT*MANIRKYEEAS
Trigger: GGAAGCCTCCTCATATTTCCTTATGTTTGCCATGCAGGTTGCTGAGAGTCCAGTTAGAATTTGCATTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAATGCTGCTCCTCTAGTTaGTCTTCAGCTAAGGATAGA +
Preference number: 3 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLECCSSS*SSAKDR
Trigger: TCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCA...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAATGCTGCTCCTCTAGTTaGTCTTCAGCTAAGGATAGA +
Preference number: 3 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKCCSSS*SSAKDR
Trigger: TCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCA...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAACGGGTTCTGCCCACTaGAATTCTGACTTGAAAACA +
Preference number: 3 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLETGSAH*NSDLKT
Trigger: TGTTTTCAAGTCAGAATTCAAGTGGGCAGAACCCGT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGAATACCTCACTACATTaGCTCTTATACCCTCACTGT +
Preference number: 3 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWNTSLH*LLYPHC
Trigger: ACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAAATTTCTGCGCAGCTTaGGAATCACCAGCATTTGCA +
Preference number: 3 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLENFCAA*ESPAFA
Trigger: TGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538489.5
3UTR-3UTR CAA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGGTTTTGTCATTTACATaGTATCAGACAGACTACCTC +
Preference number: 3 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWVLSFT*YQTDYL
Trigger: GAGGTAGTCTGTCTGATACAATGTAAATGACAAAAC...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTATGCCACAAGACCCTTaGGTAATTCATAAATCAGCC +
Preference number: 3 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIMPQDP*VIHKSA
Trigger: GGCTGATTTATGAATTACCAAAGGGTCTTGTGGCAT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAATGCCACAAGACCCTTaGGTAATTCATAAATCAGCC +
Preference number: 3 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKMPQDP*VIHKSA
Trigger: GGCTGATTTATGAATTACCAAAGGGTCTTGTGGCAT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR-3UTR CAA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGGCAAACACAAGGCACTaGCTTAAATCTTTATCTACA +
Preference number: 3 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWANTRH*LKSLST
Trigger: TGTAGATAAAGATTTAAGCAAGTGCCTTGTGTTTGC...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 72 bp GATAATATCACAGGAGGGAGGGGTAATCTGCTAATGTaGTCTTTGGTAGAACGGGCTAAGAGCTATAAAATA +
Preference number: 3 (lower is better)
Translates to: DNITGGRGNLLM*SLVERAKSYKI
Trigger: TATTTTATAGCTCTTAGCCCGTTCTACCAAAGATCACATTAGCAGATTACCCCTCCCTCCTGTGATATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR CCA 72 bp TACTTAACATTACTGAGAGCATCCAGTGCCAGCTTATaGATATCAACAATAAGGAAGAACCACTGGACAACA +
Preference number: 3 (lower is better)
Translates to: YLTLLRASSASL*ISTIRKNHWTT
Trigger: TGTTGTCCAGTGGTTCTTCCTTATTGTTGATATCCATAAGCTGGCACTGGATGCTCTCAGTAATGTTAAGTA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 72 bp AGGTCTTCACAATACGGGTTCTGCCCACTTGAATTCTaGCTTGAAAACAAACCAATTTATAATCAACTCCTG +
Preference number: 3 (lower is better)
Translates to: RSSQYGFCPLEF*LENKPIYNQLL
Trigger: CAGGAGTTGATTATAAATTGGTTTGTTTTCAAGTCAGAATTCAAGTGGGCAGAACCCGTATTGTGAAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 72 bp AGGCAGTCAGTACTTTTAGTTAATGCTGTCTCTTACTaGGGTGTCCAACTCTACTTGTTTTTGTCCTGTAAA +
Preference number: 3 (lower is better)
Translates to: RQSVLLVNAVSY*GVQLYLFLSCK
Trigger: TTTACAGGACAAAAACAAGTAGAGTTGGACACCTCAGTAAGAGACAGCATTAACTAAAAGTACTGACTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 72 bp TCTTCAAAAGGGCCACAAGATTTCTTCTGGTTATTGTaGCAGCTACCCAATTTAATGGGAAATAACACTCAA +
Preference number: 3 (lower is better)
Translates to: SSKGPQDFFWLL*QLPNLMGNNTQ
Trigger: TTGAGTGTTATTTCCCATTAAATTGGGTAGCTGTCACAATAACCAGAAGAAATCTTGTGGCCCTTTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 72 bp TGTATTAGCTCACAGGATTCACACTATAAAGTACACTaGCTCAAATTTTCTCTAATCATTCATACTCGCACA +
Preference number: 3 (lower is better)
Translates to: CISSQDSHYKVH*LKFSLIIHTRT
Trigger: TGTGCGAGTATGAATGATTAGAGAAAATTTGAGTCAGTGTACTTTATAGTGTGAATCCTGTGAGCTAATACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR TCA 72 bp ACTAAAGAACTTTTGAGTCCATATATGCAGGATTTTTaGATACCTCACTACATTTGCTCTTATACCCTCACT +
Preference number: 3 (lower is better)
Translates to: TKELLSPYMQDF*IPHYICSYTLT
Trigger: AGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCATATATGGACTCAAAAGTTCTTTAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTCCGCAGGGAGGGACCTaGAGCCGCCTCACCGACTCC +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMAPQGGT*SRLTDS
Trigger: GGAGTCGGTGAGGCGGCTGCAGGTCCCTCCCTGCGG...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGGGGGCGAGCCAGGGTTaGCGCAGCAGCGAACCCGAT +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVGASQG*RSSEPD
Trigger: ATCGGGTTCGCTGCTGCGGCAACCCTGGCTCGCCCC...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR GCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATCCGCAGGGAGGGACCTaGAGCCGCCTCACCGACTCC +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNPQGGT*SRLTDS
Trigger: GGAGTCGGTGAGGCGGCTGCAGGTCCCTCCCTGCGG...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR GCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGCACCGGAAGCCGTGGTaGACCCGAGTCCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMHRKPW*TRVPEA
Trigger: GGCTTCTGGGACTCGGGTGCACCACGGCTTCCGGTG...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
CDS-3UTR CCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGAGGCCGCAGCCCCGGTaGTTCCTGGCGGCAAGAACT +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMRPQPR*FLAART
Trigger: AGTTCTTGCCGCCAGGAACCACCGGGGCTGCGGCCT...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR TCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGGCAATTCCGAAACACTaGCATCCAGGAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLAIPKH*HPGVQA
Trigger: TGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGC...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGGCAATTTTGCAATTCTaGTTCTGGAGCCCGATACCC +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLAILQF*FWSPIP
Trigger: GGGTATCGGGCTCCAGAAGCAGAATTGCAAAATTGC...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGTCAGTGCCAAATGTATaGAACGCAGTCACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLSVPNV*NAVTAW
Trigger: CCAAGCAGTGACTGCGTTGCATACATTTGGCACTGA...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGGACTTCAAGCAGCCATaGCACCGGAAGCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMDFKQP*HRKPWC
Trigger: GCACCACGGCTTCCGGTGTCATGGCTGCTTGAAGTC...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR TCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGGGTAATCTGCTAATGTaGTCTTTGGTAGAACGGGCT +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLGNLLM*SLVERA
Trigger: AGCCCGTTCTACCAAAGATCACATTAGCAGATTACC...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGGGGGCGAGCCAGGGTTaGCGCAGCAGCGAACCCGAT +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWGASQG*RSSEPD
Trigger: ATCGGGTTCGCTGCTGCGGCAACCCTGGCTCGCCCC...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR GCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGTCTTGTCCTACTCAGTaGCAAATGTATGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLSCPTQ*QMYATQ
Trigger: CTGCGTTGCATACATTTGGCACTGAGTAGGACAAGA...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGTGTATGTGCCTTTTCTaGGTGTACAATGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLCMCLF*VYNVPQ
Trigger: CTGTGGCACATTGTACACCCAGAAAAGGCACATACA...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGCTCAAAGTCATGATGTaGTTCCAATGTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLLKVMM*FQCTRI
Trigger: GATTCGGGTACATTGGAATCACATCATGACTTTGAG...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAGACGGCTCTGTACCTaGCACAGCCGCCCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPRRLCT*HSRPKA
Trigger: GGCCTTCGGGCGGCTGTGGCAGGTACAGAGCCGTCT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR GCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGAGACGGCTCTGTACCTaGCACAGCCGCCCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWRRLCT*HSRPKA
Trigger: GGCCTTCGGGCGGCTGTGGCAGGTACAGAGCCGTCT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR GCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGTGCTTGGGCAATGGCTaGACATTAGTAGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLCLGNG*TLVGLN
Trigger: ATTTAATCCTACTAATGTGCAGCCATTGCCCAAGCA...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGGACTTCAAGCAGCCATaGCACCGGAAGCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWDFKQP*HRKPWC
Trigger: GCACCACGGCTTCCGGTGTCATGGCTGCTTGAAGTC...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR TCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGATCCATGTTCTTCTGTaGTTAAGAATGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLIHVLL*LRMGLI
Trigger: GATAAGTCCCATTCTTAATCACAGAAGAACATGGAT...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGTTGGTAAGTTTCCCATaGATTTCAGCATTTACAGTG +
Preference number: 4 (lower is better)
Translates to: ATGEAETGESLKPARQRLLVSFP*ISAFTV
Trigger: CACTGTAAATGCTGAAATTCATGGGAAACTTACCAA...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGATCCCGCCATCGGTGTaGGTTAAGGGCACGGACACG +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPIPPSV*VKGTDT
Trigger: CGTGTCCGTGCCCTTAACCCACACCGATGGCGGGAT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR TCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAGGGTAGGGGTTAAGTaGCATGAACCCTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVRVGVK*HEPSPL
Trigger: AAGAGGTGAGGGTTCATGTCACTTAACCCCTACCCT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAGCGCCGCCCTCTCTTTaGGGAAACCATACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKAPPSL*GNHTRR
Trigger: CCGCCGAGTATGGTTTCCGCAAAGAGAGGGCGGCGC...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAGCGCCGCCCTCTCTTTaGGGAAACCATACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEAPPSL*GNHTRR
Trigger: CCGCCGAGTATGGTTTCCGCAAAGAGAGGGCGGCGC...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR GCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTGGTTGCCCACATGGATaGTCTAAAACCCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMAGCPHG*SKTPQC
Trigger: ACATTGAGGGGTTTTAGAGCATCCATGTGGGCAACC...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTCCAAACTACCTGGGATaGTGCTCCTCTAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMAPNYLG*CSSSLS
Trigger: AGACAAACTAGAGGAGCAGCATCCCAGGTAGTTTGG...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGGCTGTATCATCCACATaGAACAACCCTGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVAVSST*NNPGDW
Trigger: CCAGTCACCAGGGTTGTTCCATGTGGATGATACAGC...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGTTGCAATTCTGCTTCTaGAGCCCGATACCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMLQFCF*SPIPVC
Trigger: ACAGACGGGTATCGGGCTCCAGAAGCAGAATTGCAA...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTTCTAAGGGCATGTATTaGGGAACATGCCACAAGACC +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMASKGMY*GTCHKT
Trigger: GGTCTTGTGGCATGTTCCCCAATACATGCCCTTAGA...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGGCAATTCCGAAACACTaGCATCCAGGAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVAIPKH*HPGVQA
Trigger: TGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGC...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGGCAATTTTGCAATTCTaGTTCTGGAGCCCGATACCC +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVAILQF*FWSPIP
Trigger: GGGTATCGGGCTCCAGAAGCAGAATTGCAAAATTGC...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGTCAGTGCCAAATGTATaGAACGCAGTCACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMSVPNV*NAVTAW
Trigger: CCAAGCAGTGACTGCGTTGCATACATTTGGCACTGA...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAAGCCCCGGTGGTTCCTaGCGGCAAGAACTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKSPGGS*RQELLE
Trigger: CTCAAGCAGTTCTTGCCGCCAGGAACCACCGGGGCT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR CCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATGCTGTATCATCCACATaGAACAACCCTGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNAVSST*NNPGDW
Trigger: CCAGTCACCAGGGTTGTTCCATGTGGATGATACAGC...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTTCACTGCTTGGGCAATaGCTGCACATTAGTAGGATT +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMASLLGQ*LHISRI
Trigger: AATCCTACTAATGTGCAGCCATTGCCCAAGCAGTGA...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTATCCCGCCATCGGTGTaGGTTAAGGGCACGGACACG +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIIPPSV*VKGTDT
Trigger: CGTGTCCGTGCCCTTAACCCACACCGATGGCGGGAT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR CCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTTGTATGTGCCTTTTCTaGGTGTACAATGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMACMCLF*VYNVPQ
Trigger: CTGTGGCACATTGTACACCCAGAAAAGGCACATACA...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATATATGTTACGTGGTTTaGGGTCCGCATGGACATAGC +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNICYVV*GPHGHS
Trigger: GCTATGTCCATGCGGACCTCAAACCACGTAACATAT...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGCCACAGATCAACAGCTaGGGTACATTCTGTATCACT +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVPQINS*GTFCIT
Trigger: AGTGATACAGAATGTACCTCAGCTGTTGATCTGTGG...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATCCCTCAATGTATAGCTaGGAGGTCTTGTCCTACTCA +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNPSMYS*EVLSYS
Trigger: TGAGTAGGACAAGACCTCTCAGCTATACATTGAGGG...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAAACATAAGGAAATATaGGGAGGCTTCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVKHKEI*GGFQQG
Trigger: TCCCTGCTGGAAGCCTCCTCATATTTCCTTATGTTT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGACATCTCGGGCACAATaGTGTATCATCCACATGGAA +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMTSRAQ*CIIHME
Trigger: TTCCATGTGGATGATACAGCATTGTGCCCGAGATGT...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGATGCAACGCAGTCACTaGTTGGGCAATGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPMQRSH*LGNGCT
Trigger: TGTGCAGCCATTGCCCAAGCAGTGACTGCGTTGCAT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGATGTTAGCAGCATACTaGAGGACTAGGCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVMLAAY*RTRLRS
Trigger: GCTTCTAAGCCTAGTCCTGCAGTATGCTGCTAACAT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGTCTGGGTGTACAATGTaGCACAGTAATACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMSGCTM*HSNTPK
Trigger: CTTTGGGGTATTACTGTGGCACATTGTACACCCAGA...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAAGCCCCGGTGGTTCCTaGCGGCAAGAACTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSSPGGS*RQELLE
Trigger: CTCAAGCAGTTCTTGCCGCCAGGAACCACCGGGGCT...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGCTCTGCAGGCCAGCCTaGGCCAAGCAATTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPLCRPA*AKQFCN
Trigger: ATTGCAAAATTGCTTGGCCCAGGCTGGCCTGCAGAG...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGTCACTGCTTGGGCAATaGCTGCACATTAGTAGGATT +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMSLLGQ*LHISRI
Trigger: AATCCTACTAATGTGCAGCCATTGCCCAAGCAGTGA...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGGACTCCAGTTTGTTCTaGGCCTCTCAGGAATTATGT +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMDSSLF*ASQELC
Trigger: ACATAATTCCTGAGAGGCCCAGAACAAACTGGAGTC...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGGACTCCAGTTTGTTCTaGGCCTCTCAGGAATTATGT +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVDSSLF*ASQELC
Trigger: ACATAATTCCTGAGAGGCCCAGAACAAACTGGAGTC...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATTCTAAGGGCATGTATTaGGGAACATGCCACAAGACC +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNSKGMY*GTCHKT
Trigger: GGTCTTGTGGCATGTTCCCCAATACATGCCCTTAGA...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGTTTGCCTTCCATTCCTaGGATCTGACTGTATGTTTC +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMFAFHS*DLTVCF
Trigger: GAAACATACAGTCAGATCTCAGGAATGGAAGGCAAA...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGTTTGCCTTCCATTCCTaGGATCTGACTGTATGTTTC +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVFAFHS*DLTVCF
Trigger: GAAACATACAGTCAGATCTCAGGAATGGAAGGCAAA...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATAAACATAAGGAAATATaGGGAGGCTTCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNKHKEI*GGFQQG
Trigger: TCCCTGCTGGAAGCCTCCTCATATTTCCTTATGTTT...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGAGGGTAGGGGTTAAGTaGCATGAACCCTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWRVGVK*HEPSPL
Trigger: AAGAGGTGAGGGTTCATGTCACTTAACCCCTACCCT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATAATGCTGTCTCTTACTaGGGTGTCCAACTCTACTTG +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNNAVSY*GVQLYL
Trigger: CAAGTAGAGTTGGACACCTCAGTAAGAGACAGCATT...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTTGCAATACAGTCAACTaGAACGCATTGTTCACACTT +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMACNTVN*NALFTL
Trigger: AAGTGTGAACAATGCGTTTCAGTTGACTGTATTGCA...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATCCCTCTAAAGAGAGCTaGTATATTGGTGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNPSKES*YIGGHK
Trigger: TTTGTGGCCACCAATATAGCAGCTCTCTTTAGAGGG...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTATACCTCACTACATTTaGTCTTATACCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMAIPHYI*SYTLTV
Trigger: GACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTAT...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAACAACCCTGGTGACTaGAATATAAGAGCAATTCCG +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVNNPGD*NIRAIP
Trigger: CGGAATTGCTCTTATATTCCAGTCACCAGGGTTGTT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTTGCAATTCTGCTTCTaGAGCCCGATACCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPLQFCF*SPIPVC
Trigger: ACAGACGGGTATCGGGCTCCAGAAGCAGAATTGCAA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTAGGAATTCTTCTGCTTaGATCATCATGAAGCATGCT +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMARNSSA*IIMKHA
Trigger: AGCATGCTTCATGATGATCCAAGCAGAAGAATTCCT...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGATTTCTGCGCAGCTTTaGAATCACCAGCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVISAQL*NHQHLH
Trigger: ATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAAT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGCCCCAAAGAAGTAACTaGGAAGGTGAGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPPQRSN*EGERQG
Trigger: TCCTTGCCTCTCACCTTCCCAGTTACTTCTTTGGGG...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATGCACTCTTTAGCAGCTaGAGTACCAAAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNALFSS*STKKKA
Trigger: TGCCTTCTTTTTGGTACTCCAGCTGCTAAAGAGTGC...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGTCCATTCCTGAGATCTaGCTGTATGTTTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMSIPEI*LYVSVS
Trigger: TGAAACTGAAACATACAGTCAGATCTCAGGAATGGA...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATCTGCTTGGATCATCATaGAGCATGCTTTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNLLGSS*SMLLIR
Trigger: CCTTATCAAAAGCATGCTTCATGATGATCCAAGCAG...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCTGGAGTGGGAAGCATaGCCAGATCTTCAATATGAG +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWLEWEA*PDLQYE
Trigger: CTCATATTGAAGATCTGGTCATGCTTCCCACTCCAG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTAATCAAAGAATGCTGTaGAGATTGGCATCAAGATGT +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMANQRML*RLASRC
Trigger: ACATCTTGATGCCAATCTTCACAGCATTCTTTGATT...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTTTGGTAAGTTTCCCATaGATTTCAGCATTTACAGTG +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMALVSFP*ISAFTV
Trigger: CACTGTAAATGCTGAAATTCATGGGAAACTTACCAA...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGAATAGCAGAACTGTTTaGCTTCCATTCCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMNSRTV*LPFLRS
Trigger: AGATCTCAGGAATGGAAGGCAAACAGTTCTGCTATT...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTATGCAACGCAGTCACTaGTTGGGCAATGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFMQRSH*LGNGCT
Trigger: TGTGCAGCCATTGCCCAAGCAGTGACTGCGTTGCAT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTTCCAGTGGTAATAAATaGGGATCTCTTATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMASSGNK*GSLIAR
Trigger: TCTTGCAATAAGAGATCCGCATTTATTACCACTGGA...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATTTTCAGCATTTACAGTaGCACAAACACAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNFQHLQ*HKHNCH
Trigger: GTGGCAGTTGTGTTTGTGGCACTGTAAATGCTGAAA...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTCTCTGCAGGCCAGCCTaGGCCAAGCAATTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFLCRPA*AKQFCN
Trigger: ATTGCAAAATTGCTTGGCCCAGGCTGGCCTGCAGAG...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAATGCAAATTCTAACTaGACTCTCAGCAACCTGCAT +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVNANSN*TLSNLH
Trigger: ATGCAGGTTGCTGAGAGTCCAGTTAGAATTTGCATT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATTCCATTCCTGAGATCTaGCTGTATGTTTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNSIPEI*LYVSVS
Trigger: TGAAACTGAAACATACAGTCAGATCTCAGGAATGGA...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGCAGTCCTTAGGTTACTaGTTAAAGCAAGGTTTGATA +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVQSLGY*LKQGLI
Trigger: TATCAAACCTTGCTTTAATCAGTAACCTAAGGACTG...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGCAGTCCTTAGGTTACTaGTTAAAGCAAGGTTTGATA +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMQSLGY*LKQGLI
Trigger: TATCAAACCTTGCTTTAATCAGTAACCTAAGGACTG...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGTGCCCACTTGAATTCTaGCTTGAAAACAAACCAATT +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMCPLEF*LENKPI
Trigger: AATTGGTTTGTTTTCAAGTCAGAATTCAAGTGGGCA...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCAATGTACCCGAATCTaGATAAAGCCACCTAGCATG +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWQCTRI*IKPPSM
Trigger: CATGCTAGGTGGCTTTATTCAGATTCGGGTACATTG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGGATTTGCATAAGTGGTaGTGTACACCAAATACACAA +
Preference number: 4 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMDLHKW*CTPNTQ
Trigger: TTGTGTATTTGGTGTACATCACCACTTATGCAAATC...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTGCGGCATTCACCACTaGTTTACTGGCAAATATGTG +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPCGIHH*FTGKYV
Trigger: CACATATTTGCCAGTAAAGCAGTGGTGAATGCCGCA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCCAGTCAGTAATTTCTaGGCAGCTTTGGAATCACCA +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWPVSNF*AALESP
Trigger: TGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGACTGAGAGCATCCAGTaGCAGCTTATGGATATCAAC +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPTESIQ*QLMDIN
Trigger: GTTGATATCCATAAGCTGGCACTGGATGCTCTCAGT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGACTGAGAGCATCCAGTaGCAGCTTATGGATATCAAC +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWTESIQ*QLMDIN
Trigger: GTTGATATCCATAAGCTGGCACTGGATGCTCTCAGT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGAACTACCTGGGATGCTaGTCCTCTAGTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWNYLGC*SSSLSS
Trigger: TGAAGACAAACTAGAGGAGCAGCATCCCAGGTAGTT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTATGACAATCAAAGAATaGTGTGAAGATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMAMTIKE*CEDWHQ
Trigger: TTGATGCCAATCTTCACAGCATTCTTTGATTGTCAT...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGCCCTCTAAAGAGAGCTaGTATATTGGTGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPPSKES*YIGGHK
Trigger: TTTGTGGCCACCAATATAGCAGCTCTCTTTAGAGGG...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTGCTGTATCATCCACATaGAACAACCCTGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFAVSST*NNPGDW
Trigger: CCAGTCACCAGGGTTGTTCCATGTGGATGATACAGC...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTTTGCAATTCTGCTTCTaGAGCCCGATACCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFLQFCF*SPIPVC
Trigger: ACAGACGGGTATCGGGCTCCAGAAGCAGAATTGCAA...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATAGGAATTCTTCTGCTTaGATCATCATGAAGCATGCT +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNRNSSA*IIMKHA
Trigger: AGCATGCTTCATGATGATCCAAGCAGAAGAATTCCT...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGTCCTGCATTCATATGTaGAATAACCCAAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVSCIHM*NNPRNG
Trigger: TCCATTTCTTGGGTTATTCCACATATGAATGCAGGA...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAACCCCAAAGAAGTAACTaGGAAGGTGAGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKPQRSN*EGERQG
Trigger: TCCTTGCCTCTCACCTTCCCAGTTACTTCTTTGGGG...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTGTATGTGCCTTTTCTaGGTGTACAATGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPCMCLF*VYNVPQ
Trigger: CTGTGGCACATTGTACACCCAGAAAAGGCACATACA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGGCACTCTTTAGCAGCTaGAGTACCAAAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWALFSS*STKKKA
Trigger: TGCCTTCTTTTTGGTACTCCAGCTGCTAAAGAGTGC...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGGCACTCTTTAGCAGCTaGAGTACCAAAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPALFSS*STKKKA
Trigger: TGCCTTCTTTTTGGTACTCCAGCTGCTAAAGAGTGC...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR CAA 72 bp CTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTaGGGCAATGGCTGCACATTAGTAGGATTAAATAAA +
Preference number: 4 (lower is better)
Translates to: LLSAKCMQRSHC*GNGCTLVGLNK
Trigger: TTTATTTAATCCTACTAATGTGCAGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTGCAATTCCGAAACACTaGCATCCAGGAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFAIPKH*HPGVQA
Trigger: TGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGC...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGCTGCTTGGATCATCATaGAGCATGCTTTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPLLGSS*SMLLIR
Trigger: CCTTATCAAAAGCATGCTTCATGATGATCCAAGCAG...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAACTGGAGTGGGAAGCATaGCCAGATCTTCAATATGAG +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLELEWEA*PDLQYE
Trigger: CTCATATTGAAGATCTGGTCATGCTTCCCACTCCAG...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTCCCTCAATGTATAGCTaGGAGGTCTTGTCCTACTCA +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIPSMYS*EVLSYS
Trigger: TGAGTAGGACAAGACCTCTCAGCTATACATTGAGGG...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTCCCTCAATGTATAGCTaGGAGGTCTTGTCCTACTCA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFPSMYS*EVLSYS
Trigger: TGAGTAGGACAAGACCTCTCAGCTATACATTGAGGG...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTTCCAGAAAAGTAACTaGTGCCCTTACCAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPFQKSN*CPYQSE
Trigger: TTCACTCTGGTAAGGGCATCAGTTACTTTTCTGGAA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATAAATGGGGATTCTTTTaGGCTAATTGTGACCAAGTA +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNKWGFF*ANCDQV
Trigger: TACTTGGTCACAATTAGCTCAAAAGAATCCCCATTT...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAAAACATTCATTCTCTaGACTCCACAATATGTTACG +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVKTFIL*TPQYVT
Trigger: CGTAACATATTGTGGAGTGCAGAGAATGAATGTTTT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAGTGATAGGCTGGAATTaGGGCATTCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEVIGWN*GIHHCF
Trigger: AAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCAC...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTGTGATAGGCTGGAATTaGGGCATTCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFVIGWN*GIHHCF
Trigger: AAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCAC...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTGTGATAGGCTGGAATTaGGGCATTCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIVIGWN*GIHHCF
Trigger: AAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCAC...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTGGTTGCCCACATGGATaGTCTAAAACCCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIGCPHG*SKTPQC
Trigger: ACATTGAGGGGTTTTAGAGCATCCATGTGGGCAACC...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTCCAAACTACCTGGGATaGTGCTCCTCTAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFPNYLG*CSSSLS
Trigger: AGACAAACTAGAGGAGCAGCATCCCAGGTAGTTTGG...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGGGAAGAATTAAATTCTaGCAGACAATTCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVGRIKF*QTILAF
Trigger: AAAAGCCAGAATTGTCTGGCAGAATTTAATTCTTCC...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTTTCAGCATTTACAGTaGCACAAACACAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPFQHLQ*HKHNCH
Trigger: GTGGCAGTTGTGTTTGTGGCACTGTAAATGCTGAAA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGACATTTGGAGAAAAGTaGATTGTAAACACTCCATAC +
Preference number: 4 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVTFGEK*IVNTPY
Trigger: GTATGGAGTGTTTACAATCCACTTTTCTCCAAATGT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAACAACCCTGGTGACTaGAATATAAGAGCAATTCCG +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPNNPGD*NIRAIP
Trigger: CGGAATTGCTCTTATATTCCAGTCACCAGGGTTGTT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGATTTCTGCGCAGCTTTaGAATCACCAGCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWISAQL*NHQHLH
Trigger: ATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAAT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATTCCTGCATTCATATGTaGAATAACCCAAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNSCIHM*NNPRNG
Trigger: TCCATTTCTTGGGTTATTCCACATATGAATGCAGGA...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAATATGTTACGTGGTTTaGGGTCCGCATGGACATAGC +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSICYVV*GPHGHS
Trigger: GCTATGTCCATGCGGACCTCAAACCACGTAACATAT...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAACCACAGATCAACAGCTaGGGTACATTCTGTATCACT +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKPQINS*GTFCIT
Trigger: AGTGATACAGAATGTACCTCAGCTGTTGATCTGTGG...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAACCACAGATCAACAGCTaGGGTACATTCTGTATCACT +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEPQINS*GTFCIT
Trigger: AGTGATACAGAATGTACCTCAGCTGTTGATCTGTGG...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTAAACATAAGGAAATATaGGGAGGCTTCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFKHKEI*GGFQQG
Trigger: TCCCTGCTGGAAGCCTCCTCATATTTCCTTATGTTT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAAATGCTGTCTCTTACTaGGGTGTCCAACTCTACTTG +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLENAVSY*GVQLYL
Trigger: CAAGTAGAGTTGGACACCTCAGTAAGAGACAGCATT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTATGCCCTTACCAGAGTaGAGGTCCAGTGTAATAAGA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFMPLPE*RSSVIR
Trigger: TCTTATTACACTGGACCTTCACTCTGGTAAGGGCAT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAATGCCCTTACCAGAGTaGAGGTCCAGTGTAATAAGA +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEMPLPE*RSSVIR
Trigger: TCTTATTACACTGGACCTTCACTCTGGTAAGGGCAT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAACAATGTACCCGAATCTaGATAAAGCCACCTAGCATG +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEQCTRI*IKPPSM
Trigger: CATGCTAGGTGGCTTTATTCAGATTCGGGTACATTG...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTCAATGTACCCGAATCTaGATAAAGCCACCTAGCATG +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIQCTRI*IKPPSM
Trigger: CATGCTAGGTGGCTTTATTCAGATTCGGGTACATTG...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGAGGCTCAGCTCTGTATaGTGGAGACAACATTTTTAT +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWRLSSV*WRQHFY
Trigger: ATAAAAATGTTGTCTCCATCATACAGAGCTGAGCCT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAGCAATTTTGCAATTCTaGTTCTGGAGCCCGATACCC +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSAILQF*FWSPIP
Trigger: GGGTATCGGGCTCCAGAAGCAGAATTGCAAAATTGC...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGAATAGCAGAACTGTTTaGCTTCCATTCCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWNSRTV*LPFLRS
Trigger: AGATCTCAGGAATGGAAGGCAAACAGTTCTGCTATT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAATGCGGCATTCACCACTaGTTTACTGGCAAATATGTG +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAECGIHH*FTGKYV
Trigger: CACATATTTGCCAGTAAAGCAGTGGTGAATGCCGCA...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTTGCGGCATTCACCACTaGTTTACTGGCAAATATGTG +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIICGIHH*FTGKYV
Trigger: CACATATTTGCCAGTAAAGCAGTGGTGAATGCCGCA...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAACCAGTCAGTAATTTCTaGGCAGCTTTGGAATCACCA +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKPVSNF*AALESP
Trigger: TGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGG...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAGGTTGCCCACATGGATaGTCTAAAACCCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSGCPHG*SKTPQC
Trigger: ACATTGAGGGGTTTTAGAGCATCCATGTGGGCAACC...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAAACTACCTGGGATGCTaGTCCTCTAGTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLENYLGC*SSSLSS
Trigger: TGAAGACAAACTAGAGGAGCAGCATCCCAGGTAGTT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTAACTACCTGGGATGCTaGTCCTCTAGTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFNYLGC*SSSLSS
Trigger: TGAAGACAAACTAGAGGAGCAGCATCCCAGGTAGTT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAGGACTCTCAGCAACCTaGATGGCAAACATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEGLSAT*MANIRK
Trigger: TTTCCTTATGTTTGCCATGCAGGTTGCTGAGAGTCC...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAGGACTCTCAGCAACCTaGATGGCAAACATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKGLSAT*MANIRK
Trigger: TTTCCTTATGTTTGCCATGCAGGTTGCTGAGAGTCC...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAATGTTAGCAGCATACTaGAGGACTAGGCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKMLAAY*RTRLRS
Trigger: GCTTCTAAGCCTAGTCCTGCAGTATGCTGCTAACAT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATATGACAATCAAAGAATaGTGTGAAGATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNMTIKE*CEDWHQ
Trigger: TTGATGCCAATCTTCACAGCATTCTTTGATTGTCAT...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAATCTGGGTGTACAATGTaGCACAGTAATACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAESGCTM*HSNTPK
Trigger: CTTTGGGGTATTACTGTGGCACATTGTACACCCAGA...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAATCTGGGTGTACAATGTaGCACAGTAATACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLESGCTM*HSNTPK
Trigger: CTTTGGGGTATTACTGTGGCACATTGTACACCCAGA...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAATCACTGCTTGGGCAATaGCTGCACATTAGTAGGATT +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLESLLGQ*LHISRI
Trigger: AATCCTACTAATGTGCAGCCATTGCCCAAGCAGTGA...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAATGGAACAACCCTGGTaGCTGGAATATAAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKMEQPW*LEYKSN
Trigger: ATTGCTCTTATATTCCAGTCACCAGGGTTGTTCCAT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTACCAGATCTTCAATATaGGGGGCAAAAGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIITRSSI*GAKGML
Trigger: TAGCATTCCTTTTGCCCCTCATATTGAAGATCTGGT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAACCAGATCTTCAATATaGGGGGCAAAAGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLETRSSI*GAKGML
Trigger: TAGCATTCCTTTTGCCCCTCATATTGAAGATCTGGT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGACTGGTCCATATTTTTaGCACTCCTCTTTTACATCT +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWTGPYF*HSSFTS
Trigger: AGATGTAAAAGAGGAGTGTCAAAAATATGGACCAGT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTTTCCAGAAAAGTAACTaGTGCCCTTACCAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFFQKSN*CPYQSE
Trigger: TTCACTCTGGTAAGGGCATCAGTTACTTTTCTGGAA...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAATTCCAGAAAAGTAACTaGTGCCCTTACCAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEFQKSN*CPYQSE
Trigger: TTCACTCTGGTAAGGGCATCAGTTACTTTTCTGGAA...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAACTCAAAGTCATGATGTaGTTCCAATGTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKLKVMM*FQCTRI
Trigger: GATTCGGGTACATTGGAATCACATCATGACTTTGAG...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAACTCAAAGTCATGATGTaGTTCCAATGTACCCGAATC +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAELKVMM*FQCTRI
Trigger: GATTCGGGTACATTGGAATCACATCATGACTTTGAG...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAATCAGACTCAAAGTCATaGTGTGATTCCAATGTACCC +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKSDSKS*CDSNVP
Trigger: GGGTACATTGGAATCACATCATGACTTTGAGTCTGA...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAATCAGACTCAAAGTCATaGTGTGATTCCAATGTACCC +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAESDSKS*CDSNVP
Trigger: GGGTACATTGGAATCACATCATGACTTTGAGTCTGA...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGAAATGGGGATTCTTTTaGGCTAATTGTGACCAAGTA +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWKWGFF*ANCDQV
Trigger: TACTTGGTCACAATTAGCTCAAAAGAATCCCCATTT...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGTTCTTCTGGTTATTGTaGCAGCTACCCAATTTAATG +
Preference number: 4 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPFFWLL*QLPNLM
Trigger: CATTAAATTGGGTAGCTGTCACAATAACCAGAAGAA...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGGATTTGCATAAGTGGTaGTGTACACCAAATACACAA +
Preference number: 4 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWDLHKW*CTPNTQ
Trigger: TTGTGTATTTGGTGTACATCACCACTTATGCAAATC...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCATCTTGTCCTACTCAGTaGCAAATGTATGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSSCPTQ*QMYATQ
Trigger: CTGCGTTGCATACATTTGGCACTGAGTAGGACAAGA...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAAACAACCCTGGTGACTaGAATATAAGAGCAATTCCG +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKNNPGD*NIRAIP
Trigger: CGGAATTGCTCTTATATTCCAGTCACCAGGGTTGTT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTATTTCTGCGCAGCTTTaGAATCACCAGCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFISAQL*NHQHLH
Trigger: ATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAAT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
3UTR CAA 72 bp ACTCCAGTTTGTTCTGGGCCTCTCAGGAATTATGTTTaGTCATTTACATTGTATCAGACAGACTACCTCTCA +
Preference number: 4 (lower is better)
Translates to: TPVCSGPLRNYV*SFTLYQTDYLS
Trigger: TGAGAGGTAGTCTGTCTGATACAATGTAAATGACAAAACATAATTCCTGAGAGGCCCAGAACAAACTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAATGGAACAACCCTGGTaGCTGGAATATAAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSMEQPW*LEYKSN
Trigger: ATTGCTCTTATATTCCAGTCACCAGGGTTGTTCCAT...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTTCCATTCCTGAGATCTaGCTGTATGTTTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFSIPEI*LYVSVS
Trigger: TGAAACTGAAACATACAGTCAGATCTCAGGAATGGA...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCACTGCTTGGATCATCATaGAGCATGCTTTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSLLGSS*SMLLIR
Trigger: CCTTATCAAAAGCATGCTTCATGATGATCCAAGCAG...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAAGGCTCAGCTCTGTATaGTGGAGACAACATTTTTAT +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAERLSSV*WRQHFY
Trigger: ATAAAAATGTTGTCTCCATCATACAGAGCTGAGCCT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAAGGCTCAGCTCTGTATaGTGGAGACAACATTTTTAT +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKRLSSV*WRQHFY
Trigger: ATAAAAATGTTGTCTCCATCATACAGAGCTGAGCCT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTTGCAATACAGTCAACTaGAACGCATTGTTCACACTT +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFCNTVN*NALFTL
Trigger: AAGTGTGAACAATGCGTTTCAGTTGACTGTATTGCA...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTAATAGCAGAACTGTTTaGCTTCCATTCCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIINSRTV*LPFLRS
Trigger: AGATCTCAGGAATGGAAGGCAAACAGTTCTGCTATT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAATGCTTGGGCAATGGCTaGACATTAGTAGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLECLGNG*TLVGLN
Trigger: ATTTAATCCTACTAATGTGCAGCCATTGCCCAAGCA...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTTGCTTGGGCAATGGCTaGACATTAGTAGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIICLGNG*TLVGLN
Trigger: ATTTAATCCTACTAATGTGCAGCCATTGCCCAAGCA...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAACAGCATCTGATAAGTaGTCTAACTCCGCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLETASDK*SNSAFY
Trigger: ATAAAAGGCGGAGTTAGAGCACTTATCAGATGCTGT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTACAGCATCTGATAAGTaGTCTAACTCCGCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIITASDK*SNSAFY
Trigger: ATAAAAGGCGGAGTTAGAGCACTTATCAGATGCTGT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAATACCTCACTACATTTaGTCTTATACCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEIPHYI*SYTLTV
Trigger: GACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTAT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAAGGAATTCTTCTGCTTaGATCATCATGAAGCATGCT +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLERNSSA*IIMKHA
Trigger: AGCATGCTTCATGATGATCCAAGCAGAAGAATTCCT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAATCCAGTGCCAGCTTATaGATATCAACAATAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKSSASL*ISTIRK
Trigger: CTTCCTTATTGTTGATATCCATAAGCTGGCACTGGA...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAACTGGTCCATATTTTTaGCACTCCTCTTTTACATCT +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKTGPYF*HSSFTS
Trigger: AGATGTAAAAGAGGAGTGTCAAAAATATGGACCAGT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000545294.5
CDS-3UTR TCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTTGCCCACTTGAATTCTaGCTTGAAAACAAACCAATT +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIICPLEF*LENKPI
Trigger: AATTGGTTTGTTTTCAAGTCAGAATTCAAGTGGGCA...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTAATCAAAGAATGCTGTaGAGATTGGCATCAAGATGT +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIINQRML*RLASRC
Trigger: ACATCTTGATGCCAATCTTCACAGCATTCTTTGATT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTGTATCAGCAATAAGATaGCAATCAAAGAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIVSAIR*QSKNAV
Trigger: CACAGCATTCTTTGATTGTCATCTTATTGCTGATAC...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTAAATGGGGATTCTTTTaGGCTAATTGTGACCAAGTA +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIKWGFF*ANCDQV
Trigger: TACTTGGTCACAATTAGCTCAAAAGAATCCCCATTT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAATCCATGTTCTTCTGTaGTTAAGAATGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEIHVLL*LRMGLI
Trigger: GATAAGTCCCATTCTTAATCACAGAAGAACATGGAT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAATTCTTCTGGTTATTGTaGCAGCTACCCAATTTAATG +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEFFWLL*QLPNLM
Trigger: CATTAAATTGGGTAGCTGTCACAATAACCAGAAGAA...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAGATTTGCATAAGTGGTaGTGTACACCAAATACACAA +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEDLHKW*CTPNTQ
Trigger: TTGTGTATTTGGTGTACATCACCACTTATGCAAATC...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCATGCAATACAGTCAACTaGAACGCATTGTTCACACTT +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSCNTVN*NALFTL
Trigger: AAGTGTGAACAATGCGTTTCAGTTGACTGTATTGCA...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAATCCAGTGGTAATAAATaGGGATCTCTTATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAESSGNK*GSLIAR
Trigger: TCTTGCAATAAGAGATCCGCATTTATTACCACTGGA...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAAATGCAAATTCTAACTaGACTCTCAGCAACCTGCAT +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSNANSN*TLSNLH
Trigger: ATGCAGGTTGCTGAGAGTCCAGTTAGAATTTGCATT...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAAATCAAAGAATGCTGTaGAGATTGGCATCAAGATGT +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSNQRML*RLASRC
Trigger: ACATCTTGATGCCAATCTTCACAGCATTCTTTGATT...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAGTATCAGCAATAAGATaGCAATCAAAGAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSVSAIR*QSKNAV
Trigger: CACAGCATTCTTTGATTGTCATCTTATTGCTGATAC...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR TCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCATTCTTCTGGTTATTGTaGCAGCTACCCAATTTAATG +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSFFWLL*QLPNLM
Trigger: CATTAAATTGGGTAGCTGTCACAATAACCAGAAGAA...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTAAAACATTCATTCTCTaGACTCCACAATATGTTACG +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFKTFIL*TPQYVT
Trigger: CGTAACATATTGTGGAGTGCAGAGAATGAATGTTTT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAAAAACATTCATTCTCTaGACTCCACAATATGTTACG +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEKTFIL*TPQYVT
Trigger: CGTAACATATTGTGGAGTGCAGAGAATGAATGTTTT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTATGACAATCAAAGAATaGTGTGAAGATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFMTIKE*CEDWHQ
Trigger: TTGATGCCAATCTTCACAGCATTCTTTGATTGTCAT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTAATAATCACTGTATGTaGCTTTTCTGGGTGTACAAT +
Preference number: 4 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFNNHCM*LFWVYN
Trigger: ATTGTACACCCAGAAAAGGCACATACAGTGATTATT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAACAAACACAAGGCACTTaGTTAAATCTTTATCTACAC +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEQTQGT*LNLYLH
Trigger: GTGTAGATAAAGATTTAAGCAAGTGCCTTGTGTTTG...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAACAAACACAAGGCACTTaGTTAAATCTTTATCTACAC +
Preference number: 4 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEQTQGT*LNLYLH
Trigger: GTGTAGATAAAGATTTAAGCAAGTGCCTTGTGTTTG...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAACAAACACAAGGCACTTaGTTAAATCTTTATCTACAC +
Preference number: 4 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKQTQGT*LNLYLH
Trigger: GTGTAGATAAAGATTTAAGCAAGTGCCTTGTGTTTG...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAGGAAGAATTAAATTCTaGCAGACAATTCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEGRIKF*QTILAF
Trigger: AAAAGCCAGAATTGTCTGGCAGAATTTAATTCTTCC...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CCA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTACATTTGGAGAAAAGTaGATTGTAAACACTCCATAC +
Preference number: 4 (lower is better)
Translates to: SVSPTPSPSNYVVTITIITFGEK*IVNTPY
Trigger: GTATGGAGTGTTTACAATCCACTTTTCTCCAAATGT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR GCA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAGGAAGAATTAAATTCTaGCAGACAATTCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SYGCETGREEISIDCISSGRIKF*QTILAF
Trigger: AAAAGCCAGAATTGTCTGGCAGAATTTAATTCTTCC...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS GCA 90 bp CGATACACCGAGGCGGAGGAGCCGCTACCCAGACGGCTCTGTACCTaGCACAGCCGCCCGAAGGCCTCCAGAAAACGCGGCGGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: RYTEAEEPLPRRLCT*HSRPKASRKRGGSA
Trigger: CGCGGAGCCGCCGCGTTTTCTGGAGGCCTTCGGGCGGCTGTGGCAGGTACAGAGCCGTCTGGGTAGCGGCTCCTCCGCCTCGGTGTATCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS TCA 90 bp GGGACCTGCAGCCGCCTCACCGACTCCCGGGACTTCAAGCAGCCATaGCACCGGAAGCCGTGGTGCACCCGAGTCCCAGAAGCCGGAAAT +
Preference number: 5 (lower is better)
Translates to: GTCSRLTDSRDFKQP*HRKPWCTRVPEAGN
Trigger: ATTTCCGGCTTCTGGGACTCGGGTGCACCACGGCTTCCGGTGTCATGGCTGCTTGAAGTCCCGGGAGTCGGTGAGGCGGCTGCAGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
CDS-3UTR CAA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGGGGGGCGAGCCAGGGTaGCCGCAGCAGCGAACCCGA +
Preference number: 5 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPGGEPG*PQQRTR
Trigger: TCGGGTTCGCTGCTGCGGCAACCCTGGCTCGCCCCC...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR CAA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGAGCGCCGCCCTCTCTTaGCGGAAACCATACTCGGCG +
Preference number: 5 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVSAALS*RKPYSA
Trigger: CGCCGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCT...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR CAA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAGGGGGCGAGCCAGGGTaGCCGCAGCAGCGAACCCGA +
Preference number: 5 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKGGEPG*PQQRTR
Trigger: TCGGGTTCGCTGCTGCGGCAACCCTGGCTCGCCCCC...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS-3UTR CAA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGAATTTCTGCGCAGCTTaGGAATCACCAGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: ATGEAETGESLKPARQRLNFCAA*ESPAFA
Trigger: TGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATT...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS CCA 90 bp AGATCAACAGCTGAGGTACATTCTGTATCACTCTGCAGGCCAGCCTaGGCCAAGCAATTTTGCAATTCTGCTTCTGGAGCCCGATACCCG +
Preference number: 5 (lower is better)
Translates to: RSTAEVHSVSLCRPA*AKQFCNSASGARYP
Trigger: CGGGTATCGGGCTCCAGAAGCAGAATTGCAAAATTGCTTGGCCCAGGCTGGCCTGCAGAGTGATACAGAATGTACCTCAGCTGTTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS GCA 90 bp CCTAGGCTCCACAGATCAACAGCTGAGGTACATTCTGTATCACTCTaGAGGCCAGCCTGGGCCAAGCAATTTTGCAATTCTGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: PRLHRSTAEVHSVSL*RPAWAKQFCNSASG
Trigger: TCCAGAAGCAGAATTGCAAAATTGCTTGGCCCAGGCTGGCCTGCAGAGTGATACAGAATGTACCTCAGCTGTTGATCTGTGGAGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTCAACGCAGTCACTGCTaGGGCAATGGCTGCACATTA +
Preference number: 5 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMAQRSHC*GNGCTL
Trigger: TAATGTGCAGCCATTGCCCAAGCAGTGACTGCGTTG...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp GCTACTGGGGAGGCTGAGACAGGAGAATCGCTCAAACCTGCGAGGCAGAGGTTGGTTTTGTCATTTACATaGTATCAGACAGACTACCTC +
Preference number: 5 (lower is better)
Translates to: ATGEAETGESLKPARQRLVLSFT*YQTDYL
Trigger: GAGGTAGTCTGTCTGATACAATGTAAATGACAAAAC...CAACCTCTGCCTCGCAGGTTTGAGCGATTCTCCTGTCTCAGCCTCCCCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTAGCGCCGCCCTCTCTTaGCGGAAACCATACTCGGCG +
Preference number: 5 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFSAALS*RKPYSA
Trigger: CGCCGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS CCA 90 bp CAAGGGCCTCCAAAACATCTCGGGCACAATGCTGTATCATCCACATaGAACAACCCTGGTGACTGGAATATAAGAGCAATTCCGAAACAC +
Preference number: 5 (lower is better)
Translates to: QGPPKHLGHNAVSST*NNPGDWNIRAIPKH
Trigger: GTGTTTCGGAATTGCTCTTATATTCCAGTCACCAGGGTTGTTCCATGTGGATGATACAGCATTGTGCCCGAGATGTTTTGGAGGCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS TCA 90 bp TGGAACAACCCTGGTGACTGGAATATAAGAGCAATTCCGAAACACTaGCATCCAGGAGTTCAAGCAACAGACAGCGTGATGGCACATTTG +
Preference number: 5 (lower is better)
Translates to: WNNPGDWNIRAIPKH*HPGVQATDSVMAHL
Trigger: CAAATGTGCCATCACGCTGTCTGTTGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGCTCTTATATTCCAGTCACCAGGGTTGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS TCA 90 bp ACATCTCGGGCACAATGCTGTATCATCCACATGGAACAACCCTGGTaGCTGGAATATAAGAGCAATTCCGAAACACTGACATCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: TSRAQCCIIHMEQPW*LEYKSNSETLTSRS
Trigger: ACTCCTGGATGTCAGTGTTTCGGAATTGCTCTTATATTCCAGTCACCAGGGTTGTTCCATGTGGATGATACAGCATTGTGCCCGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGGGTGATAGGCTGGAATaGCGGCATTCACCACTGCTT +
Preference number: 5 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPGDRLE*RHSPLL
Trigger: AAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACC...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGATACTCAACAAAGACTaGTCCTCTGCCAGGATTTTC +
Preference number: 5 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMILNKD*SSARIF
Trigger: GAAAATCCTGGCAGAGGACAAGTCTTTGTTGAGTAT...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000545294.5
CDS CCA 90 bp ACTTCCCATCAAACATCCTTCCAGTCAGTAATTTCTGCGCAGCTTTaGAATCACCAGCATTTGCATACTCAACAAAGACTTGTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TSHQTSFQSVISAQL*NHQHLHTQQRLVLC
Trigger: GCAGAGGACAAGTCTTTGTTGAGTATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGGAAGGATGTTTGATGGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000545294.5
CDS-3UTR CAA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGCACTGGTCCATATTTTaGACACTCCTCTTTTACATC +
Preference number: 5 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVHWSIF*TLLFYI
Trigger: GATGTAAAAGAGGAGTGTCAAAAATATGGACCAGTG...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000545294.5
CDS-3UTR CAA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTCAACGCAGTCACTGCTaGGGCAATGGCTGCACATTA +
Preference number: 5 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIQRSHC*GNGCTL
Trigger: TAATGTGCAGCCATTGCCCAAGCAGTGACTGCGTTG...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TTGTCCTACTCAGTGCCAAATGTATGCAACGCAGTCACTGCTTGGGCAATGGCTGCAAACACAAGGCACTaGCTTAAATCTTTATCTACA +
Preference number: 5 (lower is better)
Translates to: LSYSVPNVCNAVTAWAMAANTRH*LKSLST
Trigger: TGTAGATAAAGATTTAAGCAAGTGCCTTGTGTTTGC...AGCCATTGCCCAAGCAGTGACTGCGTTGCATACATTTGGCACTGAGTAGGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp CTTGTGTCCATGAACTCACGCATAGCAGCATCCTCTACTCAGGGACACATTATGAATACCTCACTACATTaGCTCTTATACCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: LVSMNSRIAASSTQGHIMNTSLH*LLYPHC
Trigger: ACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATT...CATAATGTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGGACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS TCA 90 bp CAATTCCGAAACACTGACATCCAGGAGTTCAAGCAACAGACAGCGTaGTGGCACATTTGGAGAAAAGTGGATTGTAAACACTCCATACAA +
Preference number: 5 (lower is better)
Translates to: QFRNTDIQEFKQQTA*WHIWRKVDCKHSIQ
Trigger: TTGTATGGAGTGTTTACAATCCACTTTTCTCCAAATGTGCCATCACGCTGTCTGTTGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCAGGAATTCTTCTGCTaGGATCATCATGAAGCATGC +
Preference number: 5 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWQEFFC*DHHEAC
Trigger: GCATGCTTCATGATGATCCAAGCAGAAGAATTCCTG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATTTCTGCGCAGCTTaGGAATCACCAGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPNFCAA*ESPAFA
Trigger: TGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp GGCTCAAGGCATAGCAGAAAGGGAATCCCTCTAAAGAGAGCTGCTATATTGGTGGTTTTGTCATTTACATaGTATCAGACAGACTACCTC +
Preference number: 5 (lower is better)
Translates to: GSRHSRKGIPLKRAAILVVLSFT*YQTDYL
Trigger: GAGGTAGTCTGTCTGATACAATGTAAATGACAAAAC...CACCAATATAGCAGCTCTCTTTAGAGGGATTCCCTTTCTGCTATGCCTTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATAAACTAAAAGAGGGGTaGATTTACATCTGGCACAAC +
Preference number: 5 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNKLKEG*IYIWHN
Trigger: GTTGTGCCAGATGTAAATCAACCCCTCTTTTAGTTT...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGTGCTGCTCCTCTAGTTaGTCTTCAGCTAAGGATAGA +
Preference number: 5 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWCCSSS*SSAKDR
Trigger: TCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCA...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp ACCTGGGATGCTGCTCCTCTAGTTTGTCTTCAGCTAAGGATAGAGGCAAAGAATAAATATCCATGGCACTaGTCAAGTACATGCTACTGT +
Preference number: 5 (lower is better)
Translates to: TWDAAPLVCLQLRIEAKNKYPWH*SSTCYC
Trigger: ACAGTAGCATGTACTTGACAAGTGCCATGGATATTT...ATTCTTTGCCTCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCATCCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS GCA 90 bp TTCAATATGAGGGGCAAAAGGAATGCTAAAGAATGGGCTGCACAATaGCATTTCAGCAGGAATTCTTCTGCTTGGATCATCATGAAGCAT +
Preference number: 5 (lower is better)
Translates to: FNMRGKRNAKEWAAQ*HFSRNSSAWIIMKH
Trigger: ATGCTTCATGATGATCCAAGCAGAAGAATTCCTGCTGAAATGGCATTGTGCAGCCCATTCTTTAGCATTCCTTTTGCCCCTCATATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS CCA 90 bp ACTTCCCATCAAACATCCTTCCAGTCAGTAATTTCTGCGCAGCTTTaGAATCACCAGCATTTGCATACTCAACAAAGACCTTCATATTCC +
Preference number: 5 (lower is better)
Translates to: TSHQTSFQSVISAQL*NHQHLHTQQRPSYS
Trigger: GGAATATGAAGGTCTTTGTTGAGTATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGGAAGGATGTTTGATGGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
CDS CCA 90 bp AATGAGTTTAAAACATTCATTCTCTGCACTCCACAATATGTTACGTaGTTTGAGGTCCGCATGGACATAGCCCTCATGATGAAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: NEFKTFILCTPQYVT*FEVRMDIALMMKKS
Trigger: GCTTTTCTTCATCATGAGGGCTATGTCCATGCGGACCTCAAACCACGTAACATATTGTGGAGTGCAGAGAATGAATGTTTTAAACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAACAGGAATTCTTCTGCTaGGATCATCATGAAGCATGC +
Preference number: 5 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEQEFFC*DHHEAC
Trigger: GCATGCTTCATGATGATCCAAGCAGAAGAATTCCTG...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TGCAGGATTTTTGAATACCTCACTACATTTGCTCTTATACCCTCACTGTCCTGGCACTGGTCCATATTTTaGACACTCCTCTTTTACATC +
Preference number: 5 (lower is better)
Translates to: CRIFEYLTTFALIPSLSWHWSIF*TLLFYI
Trigger: GATGTAAAAGAGGAGTGTCAAAAATATGGACCAGTG...CCAGGACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATTCAAAAATCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000545294.5
CDS-3UTR CAA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTTGCTGCTCCTCTAGTTaGTCTTCAGCTAAGGATAGA +
Preference number: 5 (lower is better)
Translates to: SVSPTPSPSNYVVTITIICCSSS*SSAKDR
Trigger: TCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCA...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAACGGGTTCTGCCCACTaGAATTCTGACTTGAAAACA +
Preference number: 5 (lower is better)
Translates to: ILMVFVLKAASLAQGIAETGSAH*NSDLKT
Trigger: TGTTTTCAAGTCAGAATTCAAGTGGGCAGAACCCGT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATACCTCACTACATTaGCTCTTATACCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPNTSLH*LLYPHC
Trigger: ACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATT...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCACAGGAATTCTTCTGCTaGGATCATCATGAAGCATGC +
Preference number: 5 (lower is better)
Translates to: SYGCETGREEISIDCISSQEFFC*DHHEAC
Trigger: GCATGCTTCATGATGATCCAAGCAGAAGAATTCCTG...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp GGCAGAAGTGCTATTAATTATCATCATCTGGGAAGCTTTCACCCAAATGAGTTTATACTCAACAAAGACTaGTCCTCTGCCAGGATTTTC +
Preference number: 5 (lower is better)
Translates to: GRSAINYHHLGSFHPNEFILNKD*SSARIF
Trigger: GAAAATCCTGGCAGAGGACAAGTCTTTGTTGAGTAT...AAACTCATTTGGGTGAAAGCTTCCCAGATGATGATAATTAATAGCACTTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000545294.5
CDS-3UTR CAA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCATGCTGCTCCTCTAGTTaGTCTTCAGCTAAGGATAGA +
Preference number: 5 (lower is better)
Translates to: SYGCETGREEISIDCISSCCSSS*SSAKDR
Trigger: TCTATCCTTAGCTGAAGACAAACTAGAGGAGCAGCA...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAATGCCACAAGACCCTTaGGTAATTCATAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEMPQDP*VIHKSA
Trigger: GGCTGATTTATGAATTACCAAAGGGTCTTGTGGCAT...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp CTTTATCTACACAGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGGCAAACACAAGGCACTaGCTTAAATCTTTATCTACA +
Preference number: 5 (lower is better)
Translates to: LYLHSHQTQSHDVIPMYPANTRH*LKSLST
Trigger: TGTAGATAAAGATTTAAGCAAGTGCCTTGTGTTTGC...CGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCTGTGTAGATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS GCA 90 bp TTTGAAGCTAAGTCCAAAGTCAATGAGTTTAAAACATTCATTCTCTaGACTCCACAATATGTTACGTGGTTTGAGGTCCGCATGGACATA +
Preference number: 5 (lower is better)
Translates to: FEAKSKVNEFKTFIL*TPQYVTWFEVRMDI
Trigger: TATGTCCATGCGGACCTCAAACCACGTAACATATTGTGGAGTGCAGAGAATGAATGTTTTAAACTCATTGACTTTGGACTTAGCTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCATGCCAGGATTTTCCTTaGGAACAAGTAGAGATACCA +
Preference number: 5 (lower is better)
Translates to: SYGCETGREEISIDCISSCQDFP*EQVEIP
Trigger: TGGTATCTCTACTTGTTCCAAAGGAAAATCCTGGCA...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000545294.5
CDS-3UTR CAA 90 bp AGTGTCTCCCCTACTCCTTCACCCAGTAACTATGTTGTTACAATTACTATCATTAAACTAAAAGAGGGGTaGATTTACATCTGGCACAAC +
Preference number: 5 (lower is better)
Translates to: SVSPTPSPSNYVVTITIIKLKEG*IYIWHN
Trigger: GTTGTGCCAGATGTAAATCAACCCCTCTTTTAGTTT...AATGATAGTAATTGTAACAACATAGTTACTGGGTGAAGGAGTAGGGGAGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp ATACTTATGGTTTTTGTTCTAAAAGCAGCCAGTTTGGCTCAAGGCATAGCAGAAAAATATCCATGGCACTaGTCAAGTACATGCTACTGT +
Preference number: 5 (lower is better)
Translates to: ILMVFVLKAASLAQGIAEKYPWH*SSTCYC
Trigger: ACAGTAGCATGTACTTGACAAGTGCCATGGATATTT...TTCTGCTATGCCTTGAGCCAAACTGGCTGCTTTTAGAACAAAAACCATAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp AGCCATCAGACTCAAAGTCATGATGTGATTCCAATGTACCCGAATCTGAATAAAAAATATCCATGGCACTaGTCAAGTACATGCTACTGT +
Preference number: 5 (lower is better)
Translates to: SHQTQSHDVIPMYPNLNKKYPWH*SSTCYC
Trigger: ACAGTAGCATGTACTTGACAAGTGCCATGGATATTT...TTTATTCAGATTCGGGTACATTGGAATCACATCATGACTTTGAGTCTGATGGCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAGTTTTGTCATTTACATaGTATCAGACAGACTACCTC +
Preference number: 5 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEVLSFT*YQTDYL
Trigger: GAGGTAGTCTGTCTGATACAATGTAAATGACAAAAC...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TATGAACATTTAGGAAAGTTTAGGTCTTCACAATACGGGTTCTGCCCACTTGAAGCAAACACAAGGCACTaGCTTAAATCTTTATCTACA +
Preference number: 5 (lower is better)
Translates to: YEHLGKFRSSQYGFCPLEANTRH*LKSLST
Trigger: TGTAGATAAAGATTTAAGCAAGTGCCTTGTGTTTGC...TTCAAGTGGGCAGAACCCGTATTGTGAAGACCTAAACTTTCCTAAATGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS-3UTR CAA 90 bp TCTTACGGATGTGAAACAGGTAGGGAAGAAATAAGTATAGACTGTATTAGCTCAAATACCTCACTACATTaGCTCTTATACCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: SYGCETGREEISIDCISSNTSLH*LLYPHC
Trigger: ACAGTGAGGGTATAAGAGCAAATGTAGTGAGGTATT...TGAGCTAATACAGTCTATACTTATTTCTTCCCTACCTGTTTCACATCCGTAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS GCA 72 bp CCGCCAGCCGGACCAGCGGCTCCGCAGGGAGGGACCTaGAGCCGCCTCACCGACTCCCGGGACTTCAAGCAG +
Preference number: 6 (lower is better)
Translates to: PPAGPAAPQGGT*SRLTDSRDFKQ
Trigger: CTGCTTGAAGTCCCGGGAGTCGGTGAGGCGGCTGCAGGTCCCTCCCTGCGGAGCCGCTGGTCCGGCTGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS GCA 72 bp GAGGCGGAGGAGCCGCTACCCAGACGGCTCTGTACCTaGCACAGCCGCCCGAAGGCCTCCAGAAAACGCGGC +
Preference number: 6 (lower is better)
Translates to: EAEEPLPRRLCT*HSRPKASRKRG
Trigger: GCCGCGTTTTCTGGAGGCCTTCGGGCGGCTGTGGCAGGTACAGAGCCGTCTGGGTAGCGGCTCCTCCGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489294.2
ENST00000538489.5
CDS TCA 72 bp AGCCGCCTCACCGACTCCCGGGACTTCAAGCAGCCATaGCACCGGAAGCCGTGGTGCACCCGAGTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: SRLTDSRDFKQP*HRKPWCTRVPE
Trigger: TTCTGGGACTCGGGTGCACCACGGCTTCCGGTGTCATGGCTGCTTGAAGTCCCGGGAGTCGGTGAGGCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
CDS GCA 72 bp TGTGACCCTGCAACTGTTCCAGCGCCGCCCTCTCTTTaGGGAAACCATACTCGGCGGCAGAGGCCGCAGCCC +
Preference number: 6 (lower is better)
Translates to: CDPATVPAPPSL*GNHTRRQRPQP
Trigger: GGGCTGCGGCCTCTGCCGCCGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCTGGAACAGTTGCAGGGTCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
CDS CCA 72 bp GCCAGCCTGGGCCAAGCAATTTTGCAATTCTGCTTCTaGAGCCCGATACCCGTCTGTCTGAATATACTTTAC +
Preference number: 6 (lower is better)
Translates to: ASLGQAILQFCF*SPIPVCLNILY
Trigger: GTAAAGTATATTCAGACAGACGGGTATCGGGCTCCAGAAGCAGAATTGCAAAATTGCTTGGCCCAGGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS TCA 72 bp GCACATTCAGCAGTCTTAGCACTGGAGTGGGAAGCATaGCCAGATCTTCAATATGAGGGGCAAAAGGAATGC +
Preference number: 6 (lower is better)
Translates to: AHSAVLALEWEA*PDLQYEGQKEC
Trigger: GCATTCCTTTTGCCCCTCATATTGAAGATCTGGTCATGCTTCCCACTCCAGTGCTAAGACTGCTGAATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS GCA 72 bp CACAGATCAACAGCTGAGGTACATTCTGTATCACTCTaGAGGCCAGCCTGGGCCAAGCAATTTTGCAATTCT +
Preference number: 6 (lower is better)
Translates to: HRSTAEVHSVSL*RPAWAKQFCNS
Trigger: AGAATTGCAAAATTGCTTGGCCCAGGCTGGCCTGCAGAGTGATACAGAATGTACCTCAGCTGTTGATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS TCA 72 bp CCTGGTGACTGGAATATAAGAGCAATTCCGAAACACTaGCATCCAGGAGTTCAAGCAACAGACAGCGTGATG +
Preference number: 6 (lower is better)
Translates to: PGDWNIRAIPKH*HPGVQATDSVM
Trigger: CATCACGCTGTCTGTTGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGCTCTTATATTCCAGTCACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS TCA 72 bp GCACAATGCTGTATCATCCACATGGAACAACCCTGGTaGCTGGAATATAAGAGCAATTCCGAAACACTGACA +
Preference number: 6 (lower is better)
Translates to: AQCCIIHMEQPW*LEYKSNSETLT
Trigger: TGTCAGTGTTTCGGAATTGCTCTTATATTCCAGTCACCAGGGTTGTTCCATGTGGATGATACAGCATTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS TCA 72 bp ATTCATTCTCTGCACTCCACAATATGTTACGTGGTTTaGGGTCCGCATGGACATAGCCCTCATGATGAAGAA +
Preference number: 6 (lower is better)
Translates to: IHSLHSTICYVV*GPHGHSPHDEE
Trigger: TTCTTCATCATGAGGGCTATGTCCATGCGGACCTCAAACCACGTAACATATTGTGGAGTGCAGAGAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS CCA 72 bp CCAAAACATCTCGGGCACAATGCTGTATCATCCACATaGAACAACCCTGGTGACTGGAATATAAGAGCAATT +
Preference number: 6 (lower is better)
Translates to: PKHLGHNAVSST*NNPGDWNIRAI
Trigger: AATTGCTCTTATATTCCAGTCACCAGGGTTGTTCCATGTGGATGATACAGCATTGTGCCCGAGATGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS CCA 72 bp AAAACATTCATTCTCTGCACTCCACAATATGTTACGTaGTTTGAGGTCCGCATGGACATAGCCCTCATGATG +
Preference number: 6 (lower is better)
Translates to: KTFILCTPQYVT*FEVRMDIALMM
Trigger: CATCATGAGGGCTATGTCCATGCGGACCTCAAACCACGTAACATATTGTGGAGTGCAGAGAATGAATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS CAA 90 bp AACTTCCCATCAAACATCCTTCCAGTCAGTAATTTCTGCGCAGCTTaGGAATCACCAGCATTTGCATACTCAACAAAGACTTGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: NFPSNILPVSNFCAA*ESPAFAYSTKTCPL
Trigger: CAGAGGACAAGTCTTTGTTGAGTATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGGAAGGATGTTTGATGGGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000545294.5
CDS CCA 72 bp GCTGCACAATGCCATTTCAGCAGGAATTCTTCTGCTTaGATCATCATGAAGCATGCTTTTGATAAGGTCTCT +
Preference number: 6 (lower is better)
Translates to: AAQCHFSRNSSA*IIMKHAFDKVS
Trigger: AGAGACCTTATCAAAAGCATGCTTCATGATGATCCAAGCAGAAGAATTCCTGCTGAAATGGCATTGTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS CCA 72 bp CAAACATCCTTCCAGTCAGTAATTTCTGCGCAGCTTTaGAATCACCAGCATTTGCATACTCAACAAAGACCT +
Preference number: 6 (lower is better)
Translates to: QTSFQSVISAQL*NHQHLHTQQRP
Trigger: AGGTCTTTGTTGAGTATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGGAAGGATGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
CDS CAA 72 bp TCAAACATCCTTCCAGTCAGTAATTTCTGCGCAGCTTaGGAATCACCAGCATTTGCATACTCAACAAAGACC +
Preference number: 6 (lower is better)
Translates to: SNILPVSNFCAA*ESPAFAYSTKT
Trigger: GGTCTTTGTTGAGTATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGGAAGGATGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
CDS TCA 72 bp ATTGCGGCATTCACCACTGCTTTACTGGCAAATATGTaGTCAATAATAGCAGAACTGTTTGCCTTCCATTCC +
Preference number: 6 (lower is better)
Translates to: IAAFTTALLANM*SIIAELFAFHS
Trigger: GGAATGGAAGGCAAACAGTTCTGCTATTATTGATCACATATTTGCCAGTAAAGCAGTGGTGAATGCCGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
ENST00000545294.5
CDS CCA 72 bp AGCAACAGACAGCGTGATGGCACATTTGGAGAAAAGTaGATTGTAAACACTCCATACAAAGTCACGATGTTT +
Preference number: 6 (lower is better)
Translates to: SNRQRDGTFGEK*IVNTPYKVTMF
Trigger: AAACATCGTGACTTTGTATGGAGTGTTTACAATCCACTTTTCTCCAAATGTGCCATCACGCTGTCTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000538489.5
CDS CCA 72 bp CAAACATCCTTCCAGTCAGTAATTTCTGCGCAGCTTTaGAATCACCAGCATTTGCATACTCAACAAAGACTT +
Preference number: 6 (lower is better)
Translates to: QTSFQSVISAQL*NHQHLHTQQRL
Trigger: AAGTCTTTGTTGAGTATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGGAAGGATGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000545294.5
CDS CAA 72 bp TCAAACATCCTTCCAGTCAGTAATTTCTGCGCAGCTTaGGAATCACCAGCATTTGCATACTCAACAAAGACT +
Preference number: 6 (lower is better)
Translates to: SNILPVSNFCAA*ESPAFAYSTKT
Trigger: AGTCTTTGTTGAGTATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGGAAGGATGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000545294.5
CDS CAA 90 bp CATTTGCATACTCAACAAAGACTTGTCCTCTGCCAGGATTTTCCTTaGGAACAAGTAGAGATACCACTGGTCCATATTTTTGACACTCCT +
Preference number: 6 (lower is better)
Translates to: HLHTQQRLVLCQDFP*EQVEIPLVHIFDTP
Trigger: AGGAGTGTCAAAAATATGGACCAGTGGTATCTCTACTTGTTCCAAAGGAAAATCCTGGCAGAGGACAAGTCTTTGTTGAGTATGCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000545294.5
CDS CAA 90 bp AACTTCCCATCAAACATCCTTCCAGTCAGTAATTTCTGCGCAGCTTaGGAATCACCAGCATTTGCATACTCAACAAAGACCTTCATATTC +
Preference number: 6 (lower is better)
Translates to: NFPSNILPVSNFCAA*ESPAFAYSTKTFIF
Trigger: GAATATGAAGGTCTTTGTTGAGTATGCAAATGCTGGTGATTCCAAAGCTGCGCAGAAATTACTGACTGGAAGGATGTTTGATGGGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538489.5
CDS CAA 72 bp ACTCAACAAAGACTTGTCCTCTGCCAGGATTTTCCTTaGGAACAAGTAGAGATACCACTGGTCCATATTTTT +
Preference number: 6 (lower is better)
Translates to: TQQRLVLCQDFP*EQVEIPLVHIF
Trigger: AAAAATATGGACCAGTGGTATCTCTACTTGTTCCAAAGGAAAATCCTGGCAGAGGACAAGTCTTTGTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282169.8
ENST00000489294.2
ENST00000545294.5