Pregenerated sensors for UGT2B17 (Homo sapiens)
Ensembl gene IDs: ENSG00000197888Ensembl transcript IDs: ENST00000317746.3, ENST00000684088.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCACAGGGATGCTCCACAGGGCAGGCTTAAGCCACCTAAGGGGCTaGCTCAGCCTTCCGTCAGTCACCTTGCTTCTGGGTCAGGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PTGMLHRAGLSHLRG*LSLPSVTLLLGQGA Trigger: GGCTCCCTGACCCAGAAGCAAGGTGACTGACGGAAGGCTGAGGCAGCCCCTTAGGTGGCTTAAGCCTGCCCTGTGGAGCATCCCTGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317746.3 ENST00000684088.1 |
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| CDS GCA 90 bp | GCAATTTCCTACCCAGGAGCGCTCTTTGGATCTCATCACTCAGGCTaGCCGGAGTACCCCACAGGGATGCTCCACAGGGCAGGCTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: AISYPGALFGSHHSG*PEYPTGMLHRAGLS Trigger: GCTTAAGCCTGCCCTGTGGAGCATCCCTGTGGGGTACTCCGGGCAGCCTGAGTGATGAGATCCAAAGAGCGCTCCTGGGTAGGAAATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317746.3 ENST00000684088.1 |
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| CDS CCA 90 bp | AAACCTCTCAGACATCGAGTTGTAGAAGGAAGGGCTTTATTCAGCTaGGAACATTGGCAAGATACTGCCTTAAAATCTGAGCTCCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: KPLRHRVVEGRALFS*EHWQDTALKSELPE Trigger: CTCGGGGAGCTCAGATTTTAAGGCAGTATCTTGCCAATGTTCCCAGCTGAATAAAGCCCTTCCTTCTACAACTCGATGTCTGAGAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000684088.1 |
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| CDS CCA 90 bp | AGACATCGAGTTGTAGAAGGAAGGGCTTTATTCAGCTGGGAACATTaGCAAGATACTGCCTTAAAATCTGAGCTCCCCGAGTGCACAATT | + |
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Preference number: 5 (lower is better) Translates to: RHRVVEGRALFSWEH*QDTALKSELPECTI Trigger: AATTGTGCACTCGGGGAGCTCAGATTTTAAGGCAGTATCTTGCCAATGTTCCCAGCTGAATAAAGCCCTTCCTTCTACAACTCGATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000684088.1 |
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| CDS GCA 72 bp | TACCCAGGAGCGCTCTTTGGATCTCATCACTCAGGCTaGCCGGAGTACCCCACAGGGATGCTCCACAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: YPGALFGSHHSG*PEYPTGMLHRA Trigger: TGCCCTGTGGAGCATCCCTGTGGGGTACTCCGGGCAGCCTGAGTGATGAGATCCAAAGAGCGCTCCTGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317746.3 ENST00000684088.1 |
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| CDS CCA 72 bp | GGGGCTGCCTCAGCCTTCCGTCAGTCACCTTGCTTCTaGGTCAGGGAGCCAAGAAATGTAGCAGGACGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GAASAFRQSPCF*VREPRNVAGRA Trigger: GGCTCGTCCTGCTACATTTCTTGGCTCCCTGACCCAGAAGCAAGGTGACTGACGGAAGGCTGAGGCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317746.3 ENST00000684088.1 |
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| CDS CAA 90 bp | GGCTTAAGCCACCTAAGGGGCTGCCTCAGCCTTCCGTCAGTCACCTaGCTTCTGGGTCAGGGAGCCAAGAAATGTAGCAGGACGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GLSHLRGCLSLPSVT*LLGQGAKKCSRTSH Trigger: GTGGCTCGTCCTGCTACATTTCTTGGCTCCCTGACCCAGAAGCAAGGTGACTGACGGAAGGCTGAGGCAGCCCCTTAGGTGGCTTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317746.3 ENST00000684088.1 |
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| CDS CAA 72 bp | CACCTAAGGGGCTGCCTCAGCCTTCCGTCAGTCACCTaGCTTCTGGGTCAGGGAGCCAAGAAATGTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HLRGCLSLPSVT*LLGQGAKKCSR Trigger: CCTGCTACATTTCTTGGCTCCCTGACCCAGAAGCAAGGTGACTGACGGAAGGCTGAGGCAGCCCCTTAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317746.3 ENST00000684088.1 |
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| CDS TCA 72 bp | CACTGTGTTAATCCTCCACGGGGGCCTGCTACGTGTTaGTCTGGTGAGGTGTTCCACTGGGGCAATTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: HCVNPPRGPATC*SGEVFHWGNFL Trigger: TAGGAAATTGCCCCAGTGGAACACCTCACCAGATCAACACGTAGCAGGCCCCCGTGGAGGATTAACACAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000317746.3 ENST00000684088.1 |
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| CDS CCA 72 bp | GTTGTAGAAGGAAGGGCTTTATTCAGCTGGGAACATTaGCAAGATACTGCCTTAAAATCTGAGCTCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: VVEGRALFSWEH*QDTALKSELPE Trigger: CTCGGGGAGCTCAGATTTTAAGGCAGTATCTTGCCAATGTTCCCAGCTGAATAAAGCCCTTCCTTCTACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000684088.1 |
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| CDS CCA 72 bp | AGACATCGAGTTGTAGAAGGAAGGGCTTTATTCAGCTaGGAACATTGGCAAGATACTGCCTTAAAATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RHRVVEGRALFS*EHWQDTALKSE Trigger: CTCAGATTTTAAGGCAGTATCTTGCCAATGTTCCCAGCTGAATAAAGCCCTTCCTTCTACAACTCGATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317746.3 ENST00000684088.1 |
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