Pregenerated sensors for UGT1A7 (Homo sapiens)
Ensembl gene IDs: ENSG00000244122Ensembl transcript IDs: ENST00000373426.3, ENST00000373426.4, ENST00000485022.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAGTCAGAAAGCCTGGTATCTGCTTCTGGCCCAGCCACCCATCTaGCAGGGGAGTGACTCCTCTCCTGAGCTTCAGGTTTCTCAACTG | + |
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Preference number: 1 (lower is better) Translates to: RSQKAWYLLLAQPPI*QGSDSSPELQVSQL Trigger: CAGTTGAGAAACCTGAAGCTCAGGAGAGGAGTCACTCCCCTGGCAGATGGGTGGCTGGGCCAGAAGCAGATACCAGGCTTTCTGACTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CCA 90 bp | CTTGAATTACTAGAACAGACTTGCCCAGAGCTAGTCATGCACACCTaGCTGGCACGCGAGTTCCTGTTCCCACCCACAAGTTTGGCACCG | + |
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Preference number: 1 (lower is better) Translates to: LELLEQTCPELVMHT*LAREFLFPPTSLAP Trigger: CGGTGCCAAACTTGTGGGTGGGAACAGGAACTCGCGTGCCAGCCAGGTGTGCATGACTAGCTCTGGGCAAGTCTGTTCTAGTAATTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR TCA 90 bp | CATCTGCCATCTCTGGGTGCCCCACCCTCCACACCTTCAGCAACCTaGAAGCTCTCTGAACCCTGCCCTTCTGAGTTTTTATGTAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: HLPSLGAPPSTPSAT*KLSEPCPSEFLCRL Trigger: AAGCCTACATAAAAACTCAGAAGGGCAGGGTTCAGAGAGCTTTCAGGTTGCTGAAGGTGTGGAGGGTGGGGCACCCAGAGATGGCAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR TCA 90 bp | AGTCCAAGCTGGGAGCAGCCTCCCAAGAGGATTGGCAGCTTACAATaGTCAAAGTCATGGGGGCGGCAGCATCTTGCTTTGAGTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: SPSWEQPPKRIGSLQ*SKSWGRQHLALSSS Trigger: AGATGAACTCAAAGCAAGATGCTGCCGCCCCCATGACTTTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGCTGCTCCCAGCTTGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CCA 90 bp | CCCTTCCAACCACAGCCTTGCTCTGAAAATCCTGTTGCTCATATGTaGGTCCTGTTCTTAGTCCCAGAAGTCCCTACAGAACATGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: PFQPQPCSENPVAHM*VLFLVPEVPTEHEL Trigger: CAACTCATGTTCTGTAGGGACTTCTGGGACTAAGAACAGGACCCACATATGAGCAACAGGATTTTCAGAGCAAGGCTGTGGTTGGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR TCA 90 bp | GCAGCTTACAATGATCAAAGTCATGGGGGCGGCAGCATCTTGCTTTaGGTTCATCTAGATAGCAATAAGACTCCAGGAAGGTTGCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: AAYNDQSHGGGSILL*VHLDSNKTPGRLQR Trigger: CCTTTGCAACCTTCCTGGAGTCTTATTGCTATCTAGATGAACTCAAAGCAAGATGCTGCCGCCCCCATGACTTTGATCATTGTAAGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CCA 90 bp | ATCTCTCTCTCCTTTCTTCCCTCTAATCGCAAGGGTTTTGTTCCCTaGCAACTAGCCCTCATCCTTAGAGACTTTACATCTCCTTTACAT | + |
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Preference number: 1 (lower is better) Translates to: ISLSFLPSNRKGFVP*QLALILRDFTSPLH Trigger: ATGTAAAGGAGATGTAAAGTCTCTAAGGATGAGGGCTAGTTGCCAGGGAACAAAACCCTTGCGATTAGAGGGAAGAAAGGAGAGAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CAA 90 bp | CGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTCCCAAGAGGATaGGCAGCTTACAATGATCAAAGTCATGGGGGCGGCAGCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: RRLSSVQAGSSLPRG*AAYNDQSHGGGSIL Trigger: CAAGATGCTGCCGCCCCCATGACTTTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CAA 90 bp | GACAGGGCTGGCCCCCATGGGGAACATAACCAGGATGCAAATTCATaGTTCAAGGCATGCGAAGACTCAGCTCAGTCCAAGCTGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: DRAGPHGEHNQDANS*FKACEDSAQSKLGA Trigger: TGCTCCCAGCTTGGACTGAGCTGAGTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCCATGGGGGCCAGCCCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR GCA 90 bp | CCACACCTTCAGCAACCTGAAAGCTCTCTGAACCCTGCCCTTCTGAGTTTTTATCTGGAGACCCAGGCCTaGCCTGGTTGGTGCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: PHLQQPESSLNPALLSFYLETQA*PGWCCR Trigger: CCTACAGCACCAACCAGGGCAGGCCTGGGTCTCCAG...ATAAAAACTCAGAAGGGCAGGGTTCAGAGAGCTTTCAGGTTGCTGAAGGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR GCA 90 bp | ATTCATTGTTCAAGGCATGCGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTACTAGACCTCCACTCTaGTGTGGACGTTGGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: IHCSRHAKTQLSPSWEQPTRPPL*CGRWSE Trigger: CTCAGACCAACGTCCACAGCAGAGTGGAGGTCTAGT...AGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGCATGCCTTGAACAATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAAGAAGCCTGAGCAACATGATTAGAGGGGCCACTCCAAGGACAGGGCTGGCCTCCCAAGAGGATTaGCAGCTTACAATGATCAAA | + |
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Preference number: 2 (lower is better) Translates to: GRRSLSNMIRGATPRTGLASQED*QLTMIK Trigger: TTTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGC...CAGCCCTGTCCTTGGAGTGGCCCCTCTAATCATGTTGCTCAGGCTTCTTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR GCA 90 bp | AATCCTAGAGCAGGAGTCAGAAAGCCTGGTATCTGCTTCTGGCCCAGCCACCCATTCCAACCACAGCCTTaGTCTGAAAATCCTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: NPRAGVRKPGICFWPSHPFQPQP*SENPVA Trigger: AGCAACAGGATTTTCAGAGCAAGGCTGTGGTTGGAA...TGGGTGGCTGGGCCAGAAGCAGATACCAGGCTTTCTGACTCCTGCTCTAGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CAA 90 bp | GACTCCAGGAAGGTTGCAAAGGGAACAGAGCTCAGGTCCACCTTCTaGAGCAGGCAGACATTAGGCAGGTTTCCTTCAAAGAACAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: DSRKVAKGTELRSTF*SRQTLGRFPSKNSS Trigger: TGAACTGTTCTTTGAAGGAAACCTGCCTAATGTCTGCCTGCTCAAGAAGGTGGACCTGAGCTCTGTTCCCTTTGCAACCTTCCTGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAAGAAGCCTGAGCAACATGATTAGAGGGGCCACTCCAAGGACAGGGCTGAGCGGGATCAAGAGATaGTACAAACTTCACATTCTT | + |
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Preference number: 2 (lower is better) Translates to: GRRSLSNMIRGATPRTGLSGIKR*YKLHIL Trigger: AAGAATGTGAAGTTTGTAGCATCTCTTGATCCCGCT...CAGCCCTGTCCTTGGAGTGGCCCCTCTAATCATGTTGCTCAGGCTTCTTCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGCAGACATTAGGCAGGTTTCCTTCAAAGAACAGTTCATCTAGAGGAAGATCCTCAGGTATCACTTaGGTGTCCAGGCAAAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: SRQTLGRFPSKNSSSRGRSSGIT*VSRQRP Trigger: CGGCCTTTGCCTGGACACTCAAGTGATACCTGAGGA...TCTTCCTCTAGATGAACTGTTCTTTGAAGGAAACCTGCCTAATGTCTGCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR TCA 90 bp | ATTCATTGTTCAAGGCATGCGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTGTTGGAGGAAGGAGCTaGAGAAATGAAACTAACATC | + |
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Preference number: 2 (lower is better) Translates to: IHCSRHAKTQLSPSWEQPVGGRS*RNETNI Trigger: GATGTTAGTTTCATTTCTTCAGCTCCTTCCTCCAAC...AGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGCATGCCTTGAACAATGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGTGGTACCTTGAATTACTAGAACAGACTTGCCCAGAGCTAGTCATGCACCCTGTTGCTCATATGTaGGTCCTGTTCTTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ERWYLELLEQTCPELVMHPVAHM*VLFLVP Trigger: TGGGACTAAGAACAGGACCCACATATGAGCAACAGG...GTGCATGACTAGCTCTGGGCAAGTCTGTTCTAGTAATTCAAGGTACCACCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTGCACCGGAGGTGTTCTaGGGCCCAGGAAGGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVAPEVF*GPGREK Trigger: CTTCTCCCTTCCTGGGCCCCAGAACACCTCCGGTGC...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR TCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTCTGTGGACGTTGGTCTaGGCCCTTCCAACCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVLWTLV*ALPTTA Trigger: GGCTGTGGTTGGAAGGGCTCAGACCAACGTCCACAG...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGTGGTACCTTGAATTACTAGAACAGACTTGCCCAGAGCTAGTCATGCACATGCATACCATCCCTTaGATTCCTAACACCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: ERWYLELLEQTCPELVMHMHTIP*IPNTFL Trigger: CAAGAAGGTGTTAGGAATTCAAGGGATGGTATGCAT...GTGCATGACTAGCTCTGGGCAAGTCTGTTCTAGTAATTCAAGGTACCACCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR GCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTGCCTGCCCTGGTTGGTaGTGTAGGAGTCAAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVACPGW*CRSQGV Trigger: GACACCTTGACTCCTACAGCACCAACCAGGGCAGGC...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTTCCCACCCACAAGTTTaGCACCGGAGGTGTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVSHPQV*HRRCSG Trigger: CCCAGAACACCTCCGGTGCCAAACTTGTGGGTGGGA...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR GCA 72 bp | GGGTATGGCCATGGAGCCCCATCTGCCATCTCTGGGTaGCCCACCCTCCACACCTTCAGCAACCTGAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: GYGHGAPSAISG*PTLHTFSNLKA Trigger: AGCTTTCAGGTTGCTGAAGGTGTGGAGGGTGGGGCACCCAGAGATGGCAGATGGGGCTCCATGGCCATACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGCACGCGAGTTCCTGTTCCCACCCACAAGTTTGGCACCGGAGGTGTTCTGTCCTCAGGTATCACTaGAGTGTCCAGGCAAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: GWHASSCSHPQVWHRRCSVLRYH*SVQAKA Trigger: GGCCTTTGCCTGGACACTCAAGTGATACCTGAGGAC...AGAACACCTCCGGTGCCAAACTTGTGGGTGGGAACAGGAACTCGCGTGCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CCA 72 bp | GCTCAGTCCAAGCTGGGAGCAGCCTCCCAAGAGGATTaGCAGCTTACAATGATCAAAGTCATGGGGGCGGCA | + |
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Preference number: 3 (lower is better) Translates to: AQSKLGAASQED*QLTMIKVMGAA Trigger: TGCCGCCCCCATGACTTTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGCTGCTCCCAGCTTGGACTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CCA 72 bp | CTAGAACAGACTTGCCCAGAGCTAGTCATGCACACCTaGCTGGCACGCGAGTTCCTGTTCCCACCCACAAGT | + |
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Preference number: 3 (lower is better) Translates to: LEQTCPELVMHT*LAREFLFPPTS Trigger: ACTTGTGGGTGGGAACAGGAACTCGCGTGCCAGCCAGGTGTGCATGACTAGCTCTGGGCAAGTCTGTTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGCACGCGAGTTCCTGTTCCCACCCACAAGTTTGGCACCGGAGGTGTTCTAGCCTCCCAAGAGGATaGGCAGCTTACAATGATCAA | + |
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Preference number: 3 (lower is better) Translates to: GWHASSCSHPQVWHRRCSSLPRG*AAYNDQ Trigger: TTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGCT...AGAACACCTCCGGTGCCAAACTTGTGGGTGGGAACAGGAACTCGCGTGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR TCA 72 bp | TGGGAGCAGCCTCCCAAGAGGATTGGCAGCTTACAATaGTCAAAGTCATGGGGGCGGCAGCATCTTGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: WEQPPKRIGSLQ*SKSWGRQHLAL Trigger: CAAAGCAAGATGCTGCCGCCCCCATGACTTTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGCTGCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CCA 72 bp | TGTTCAAGGCATGCGAAGACTCAGCTCAGTCCAAGCTaGGAGCAGCCTCCCAAGAGGATTGGCAGCTTACAA | + |
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Preference number: 3 (lower is better) Translates to: CSRHAKTQLSPS*EQPPKRIGSLQ Trigger: TTGTAAGCTGCCAATCCTCTTGGGAGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGCATGCCTTGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CAA 90 bp | GGGAGAAGAAGCCTGAGCAACATGATTAGAGGGGCCACTCCAAGGACAGGGCTGCAGGATGCAAATTCATaGTTCAAGGCATGCGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: GRRSLSNMIRGATPRTGLQDANS*FKACED Trigger: GTCTTCGCATGCCTTGAACAATGAATTTGCATCCTG...CAGCCCTGTCCTTGGAGTGGCCCCTCTAATCATGTTGCTCAGGCTTCTTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CAA 90 bp | CCACACCTTCAGCAACCTGAAAGCTCTCTGAACCCTGCCCTTCTGAGTTTTTATTTCCCACCCACAAGTTaGGCACCGGAGGTGTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: PHLQQPESSLNPALLSFYFPPTS*APEVFW Trigger: CCAGAACACCTCCGGTGCCAAACTTGTGGGTGGGAA...ATAAAAACTCAGAAGGGCAGGGTTCAGAGAGCTTTCAGGTTGCTGAAGGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR-3UTR CAA 90 bp | CCCCATGGGGAACATAACCAGGATGCAAATTCATTGTTCAAGGCATGCGAAGACCTCAGGTCCACCTTCTaGAGCAGGCAGACATTAGGC | + |
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Preference number: 3 (lower is better) Translates to: PHGEHNQDANSLFKACEDLRSTF*SRQTLG Trigger: GCCTAATGTCTGCCTGCTCAAGAAGGTGGACCTGAG...GTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCCATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CCA 72 bp | CCACAGCCTTGCTCTGAAAATCCTGTTGCTCATATGTaGGTCCTGTTCTTAGTCCCAGAAGTCCCTACAGAA | + |
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Preference number: 3 (lower is better) Translates to: PQPCSENPVAHM*VLFLVPEVPTE Trigger: TTCTGTAGGGACTTCTGGGACTAAGAACAGGACCCACATATGAGCAACAGGATTTTCAGAGCAAGGCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR TCA 72 bp | AATGATCAAAGTCATGGGGGCGGCAGCATCTTGCTTTaGGTTCATCTAGATAGCAATAAGACTCCAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: NDQSHGGGSILL*VHLDSNKTPGR Trigger: CCTTCCTGGAGTCTTATTGCTATCTAGATGAACTCAAAGCAAGATGCTGCCGCCCCCATGACTTTGATCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR GCA 72 bp | CAGGCCATGTTTCAGAGTAAGAAAAGTAATCTAGAATaGCAGCCTGTCTGCACGTCCTCTGAAAAATGGCAC | + |
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Preference number: 3 (lower is better) Translates to: QAMFQSKKSNLE*QPVCTSSEKWH Trigger: GTGCCATTTTTCAGAGGACGTGCAGACAGGCTGGCATTCTAGATTACTTTTCTTACTCTGAAACATGGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373426.3 |
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| 3UTR GCA 72 bp | TTTTCCCCAAAGCAAGAAATCATATGCTGTTCTCAGTaGACTCCAAGCCATTCATTCATTTCACCTACACTC | + |
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Preference number: 3 (lower is better) Translates to: FSPKQEIICCSQ*TPSHSFISPTL Trigger: GAGTGTAGGTGAAATGAATGAATGGCTTGGAGTGCACTGAGAACAGCATATGATTTCTTGCTTTGGGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373426.3 |
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| 3UTR GCA 72 bp | GAGATGAGGACTGACCATTATTGGTTAAGGATCAATTaGAACCATCTGCAGAAGCCAAAAGATAAGATTAAA | + |
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Preference number: 3 (lower is better) Translates to: EMRTDHYWLRIN*NHLQKPKDKIK Trigger: TTTAATCTTATCTTTTGGCTTCTGCAGATGGTTGCAATTGATCCTTAACCAATAATGGTCAGTCCTCATCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373426.3 |
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| 3UTR TCA 72 bp | AGAAATGAAACTAACATCACTATGCATACCATCCCTTaGATTCCTAACACCTTCTTGCAAATTAAGAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RNETNITMHTIP*IPNTFLQIKKV Trigger: TACCTTCTTAATTTGCAAGAAGGTGTTAGGAATTCAAGGGATGGTATGCATAGTGATGTTAGTTTCATTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | GGCTGGCACGCGAGTTCCTGTTCCCACCCACAAGTTTGGCACCGGAGGTGTTCTGCACCGGAGGTGTTCTaGGGCCCAGGAAGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GWHASSCSHPQVWHRRCSAPEVF*GPGREK Trigger: CTTCTCCCTTCCTGGGCCCCAGAACACCTCCGGTGC...AGAACACCTCCGGTGCCAAACTTGTGGGTGGGAACAGGAACTCGCGTGCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | GGCTGGCACGCGAGTTCCTGTTCCCACCCACAAGTTTGGCACCGGAGGTGTTCTGGGATTGCTGCAGGCTaGATGACTCAGGCTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GWHASSCSHPQVWHRRCSGIAAG*MTQAWD Trigger: GTCCCAAGCCTGAGTCATTCAGCCTGCAGCAATCCC...AGAACACCTCCGGTGCCAAACTTGTGGGTGGGAACAGGAACTCGCGTGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | GGCTGGCACGCGAGTTCCTGTTCCCACCCACAAGTTTGGCACCGGAGGTGTTCTCAAGATATGGGGGTATaGCCATGGAGCCCCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: GWHASSCSHPQVWHRRCSQDMGV*PWSPIC Trigger: GCAGATGGGGCTCCATGGCCATACCCCCATATCTTG...AGAACACCTCCGGTGCCAAACTTGTGGGTGGGAACAGGAACTCGCGTGCCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | GCGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTCCCAAGAGGATTGGCAGCACACCTTCAGCAACCTaGAAGCTCTCTGAACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AKTQLSPSWEQPPKRIGSTPSAT*KLSEPC Trigger: GCAGGGTTCAGAGAGCTTTCAGGTTGCTGAAGGTGT...GCTGCCAATCCTCTTGGGAGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | GGGAGAAGAAGCCTGAGCAACATGATTAGAGGGGCCACTCCAAGGACAGGGCTGTCATGCACACCTGGCTaGCACGCGAGTTCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GRRSLSNMIRGATPRTGLSCTPG*HASSCS Trigger: GGAACAGGAACTCGCGTGCCAGCCAGGTGTGCATGA...CAGCCCTGTCCTTGGAGTGGCCCCTCTAATCATGTTGCTCAGGCTTCTTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CAA 72 bp | AGCTCAGTCCAAGCTGGGAGCAGCCTCCCAAGAGGATaGGCAGCTTACAATGATCAAAGTCATGGGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SSVQAGSSLPRG*AAYNDQSHGGG Trigger: GCCGCCCCCATGACTTTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGCTGCTCCCAGCTTGGACTGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | GGGAGAAGAAGCCTGAGCAACATGATTAGAGGGGCCACTCCAAGGACAGGGCTGACTAGACCTCCACTCTaGTGTGGACGTTGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GRRSLSNMIRGATPRTGLTRPPL*CGRWSE Trigger: CTCAGACCAACGTCCACAGCAGAGTGGAGGTCTAGT...CAGCCCTGTCCTTGGAGTGGCCCCTCTAATCATGTTGCTCAGGCTTCTTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | ATTCATTGTTCAAGGCATGCGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTGCCTGCCCTGGTTGGTaGTGTAGGAGTCAAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: IHCSRHAKTQLSPSWEQPACPGW*CRSQGV Trigger: GACACCTTGACTCCTACAGCACCAACCAGGGCAGGC...AGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGCATGCCTTGAACAATGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | CCCCATGGGGAACATAACCAGGATGCAAATTCATTGTTCAAGGCATGCGAAGACCCATGGAGCCCCATCTaGCATCTCTGGGTGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PHGEHNQDANSLFKACEDPWSPI*HLWVPH Trigger: GTGGGGCACCCAGAGATGGCAGATGGGGCTCCATGG...GTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCCATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | CCACACCTTCAGCAACCTGAAAGCTCTCTGAACCCTGCCCTTCTGAGTTTTTATCTGTGGACGTTGGTCTaGGCCCTTCCAACCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: PHLQQPESSLNPALLSFYLWTLV*ALPTTA Trigger: GGCTGTGGTTGGAAGGGCTCAGACCAACGTCCACAG...ATAAAAACTCAGAAGGGCAGGGTTCAGAGAGCTTTCAGGTTGCTGAAGGTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | CCCCATGGGGAACATAACCAGGATGCAAATTCATTGTTCAAGGCATGCGAAGACGGGTCACACTGGCCCTaGCTGCTAACCACACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PHGEHNQDANSLFKACEDGSHWP*LLTTLL Trigger: CAGCAGTGTGGTTAGCAGGCAGGGCCAGTGTGACCC...GTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | CCACAGCCTTGCTCTGAAAATCCTGTTGCTCATATGTGGGTCCTGTTCTTAGTCTCTGCCATCTCTGGGTaGCCCACCCTCCACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: PQPCSENPVAHMWVLFLVSAISG*PTLHTF Trigger: GAAGGTGTGGAGGGTGGGGCACCCAGAGATGGCAGA...GACTAAGAACAGGACCCACATATGAGCAACAGGATTTTCAGAGCAAGGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | GGGAGAAGAAGCCTGAGCAACATGATTAGAGGGGCCACTCCAAGGACAGGGCTGCCTGTTGCTCATATGTaGGTCCTGTTCTTAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRRSLSNMIRGATPRTGLPVAHM*VLFLVP Trigger: TGGGACTAAGAACAGGACCCACATATGAGCAACAGG...CAGCCCTGTCCTTGGAGTGGCCCCTCTAATCATGTTGCTCAGGCTTCTTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | CCACAGCCTTGCTCTGAAAATCCTGTTGCTCATATGTGGGTCCTGTTCTTAGTCCCTGGTATCTGCTTCTaGCCCAGCCACCCATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PQPCSENPVAHMWVLFLVPGICF*PSHPSA Trigger: GGCAGATGGGTGGCTGGGCCAGAAGCAGATACCAGG...GACTAAGAACAGGACCCACATATGAGCAACAGGATTTTCAGAGCAAGGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | GCGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTCCCAAGAGGATTGGCAGCAGCGGGATCAAGAGATaGTACAAACTTCACATTCTT | + |
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Preference number: 4 (lower is better) Translates to: AKTQLSPSWEQPPKRIGSSGIKR*YKLHIL Trigger: AAGAATGTGAAGTTTGTAGCATCTCTTGATCCCGCT...GCTGCCAATCCTCTTGGGAGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | CCACACCTTCAGCAACCTGAAAGCTCTCTGAACCCTGCCCTTCTGAGTTTTTATCTAGTCATGCACACCTaGCTGGCACGCGAGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PHLQQPESSLNPALLSFYLVMHT*LAREFL Trigger: CAGGAACTCGCGTGCCAGCCAGGTGTGCATGACTAG...ATAAAAACTCAGAAGGGCAGGGTTCAGAGAGCTTTCAGGTTGCTGAAGGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | AGCAGGCAGACATTAGGCAGGTTTCCTTCAAAGAACAGTTCATCTAGAGGAAGACCCATCTGCCATCTCTaGGTGCCCCACCCTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: SRQTLGRFPSKNSSSRGRPICHL*VPHPPH Trigger: GTGTGGAGGGTGGGGCACCCAGAGATGGCAGATGGG...TCTTCCTCTAGATGAACTGTTCTTTGAAGGAAACCTGCCTAATGTCTGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | CCACACCTTCAGCAACCTGAAAGCTCTCTGAACCCTGCCCTTCTGAGTTTTTATTCCTCAGGTATCACTTaGGTGTCCAGGCAAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PHLQQPESSLNPALLSFYSSGIT*VSRQRP Trigger: CGGCCTTTGCCTGGACACTCAAGTGATACCTGAGGA...ATAAAAACTCAGAAGGGCAGGGTTCAGAGAGCTTTCAGGTTGCTGAAGGTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | CCACAGCCTTGCTCTGAAAATCCTGTTGCTCATATGTGGGTCCTGTTCTTAGTCAGAAAGCCTGGTATCTaGTTCTGGCCCAGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: PQPCSENPVAHMWVLFLVRKPGI*FWPSHP Trigger: TGGGTGGCTGGGCCAGAAGCAGATACCAGGCTTTCT...GACTAAGAACAGGACCCACATATGAGCAACAGGATTTTCAGAGCAAGGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | GGGGAACATAACCAGGATGCAAATTCATTGTTCAAGGCATGCGAAGACTCAGCTATGGGGGTATGGCCATaGAGCCCCATCTGCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: GEHNQDANSLFKACEDSAMGVWP*SPICHL Trigger: GAGATGGCAGATGGGGCTCCATGGCCATACCCCCAT...AGCTGAGTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CAA 72 bp | GGCCCCCATGGGGAACATAACCAGGATGCAAATTCATaGTTCAAGGCATGCGAAGACTCAGCTCAGTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GPHGEHNQDANS*FKACEDSAQSK Trigger: CTTGGACTGAGCTGAGTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCCATGGGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | TCTCTCTCCTTTCTTCCCTCTAATCGCAAGGGTTTTGTTCCCTGGCAACTAGCCTTGCTGCAGGCTGAATaGCTCAGGCTTGGGACATAT | + |
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Preference number: 4 (lower is better) Translates to: SLSFLPSNRKGFVPWQLALLQAE*LRLGTY Trigger: ATATGTCCCAAGCCTGAGTCATTCAGCCTGCAGCAA...GGCTAGTTGCCAGGGAACAAAACCCTTGCGATTAGAGGGAAGAAAGGAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | CACCCTCCACACCTTCAGCAACCTGAAAGCTCTCTGAACCCTGCCCTTCTGAGTGTTGGAGGAAGGAGCTaGAGAAATGAAACTAACATC | + |
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Preference number: 4 (lower is better) Translates to: HPPHLQQPESSLNPALLSVGGRS*RNETNI Trigger: GATGTTAGTTTCATTTCTTCAGCTCCTTCCTCCAAC...ACTCAGAAGGGCAGGGTTCAGAGAGCTTTCAGGTTGCTGAAGGTGTGGAGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | CCACAGCCTTGCTCTGAAAATCCTGTTGCTCATATGTGGGTCCTGTTCTTAGTCAGGAGTCAGAAAGCCTaGTATCTGCTTCTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PQPCSENPVAHMWVLFLVRSQKA*YLLLAQ Trigger: CTGGGCCAGAAGCAGATACCAGGCTTTCTGACTCCT...GACTAAGAACAGGACCCACATATGAGCAACAGGATTTTCAGAGCAAGGCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | CCACAGCCTTGCTCTGAAAATCCTGTTGCTCATATGTGGGTCCTGTTCTTAGTCCGCTCCCACCACTTATaGTTTCAGGAGCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPCSENPVAHMWVLFLVRSHHL*FQELCP Trigger: TGGACACAGCTCCTGAAACCATAAGTGGTGGGAGCG...GACTAAGAACAGGACCCACATATGAGCAACAGGATTTTCAGAGCAAGGCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| 3UTR CAA 72 bp | AAGGTTGCAAAGGGAACAGAGCTCAGGTCCACCTTCTaGAGCAGGCAGACATTAGGCAGGTTTCCTTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: KVAKGTELRSTF*SRQTLGRFPSK Trigger: CTTTGAAGGAAACCTGCCTAATGTCTGCCTGCTCAAGAAGGTGGACCTGAGCTCTGTTCCCTTTGCAACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | AATCCTAGAGCAGGAGTCAGAAAGCCTGGTATCTGCTTCTGGCCCAGCCACCCATGCAAACAATACGGATaGATAGCCAGAGGAAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: NPRAGVRKPGICFWPSHPCKQYG*IARGKS Trigger: ACTTTTTCCTCTGGCTATTCATCCGTATTGTTTGCA...TGGGTGGCTGGGCCAGAAGCAGATACCAGGCTTTCTGACTCCTGCTCTAGGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTCTGGAGACCCAGGCCTaGCCTGGTTGGTGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVLETQA*PGWCCR Trigger: CCTACAGCACCAACCAGGGCAGGCCTGGGTCTCCAG...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | ATTCATTGTTCAAGGCATGCGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTATTGTTGCCCATCGGTaGTCAAATCAATCTTCAATC | + |
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Preference number: 4 (lower is better) Translates to: IHCSRHAKTQLSPSWEQPIVAHR*SNQSSI Trigger: GATTGAAGATTGATTTGATCACCGATGGGCAACAAT...AGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGCATGCCTTGAACAATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTCAGCTCAGTCCAAGCTaGGAGCAGCCTCCCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVQLSPS*EQPPKR Trigger: CCTCTTGGGAGGCTGCTCCCAGCTTGGACTGAGCTG...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | CTAGCCCTCATCCTTAGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATTCCCACCCACAAGTTTaGCACCGGAGGTGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LALILRDFTSPLHKLRCDSHPQV*HRRCSG Trigger: CCCAGAACACCTCCGGTGCCAAACTTGTGGGTGGGA...ATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCTAAGGATGAGGGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | CCACAGCCTTGCTCTGAAAATCCTGTTGCTCATATGTGGGTCCTGTTCTTAGTCAAGCTCTCTGAACCCTaGCCTTCTGAGTTTTTATGT | + |
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Preference number: 4 (lower is better) Translates to: PQPCSENPVAHMWVLFLVKLSEP*PSEFLC Trigger: ACATAAAAACTCAGAAGGGCAGGGTTCAGAGAGCTT...GACTAAGAACAGGACCCACATATGAGCAACAGGATTTTCAGAGCAAGGCTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | CCCCATGGGGAACATAACCAGGATGCAAATTCATTGTTCAAGGCATGCGAAGACCATCTAGAGGAAGAATaGCTTAAGCAAGCATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PHGEHNQDANSLFKACEDHLEEE*LKQACR Trigger: CCTACATGCTTGCTTAAGCCATTCTTCCTCTAGATG...GTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCCATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | CCCCATGGGGAACATAACCAGGATGCAAATTCATTGTTCAAGGCATGCGAAGACTGTCCCAGTGAGAGGTaGTACCTTGAATTACTAGAA | + |
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Preference number: 4 (lower is better) Translates to: PHGEHNQDANSLFKACEDCPSER*YLELLE Trigger: TTCTAGTAATTCAAGGTACCACCTCTCACTGGGACA...GTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCCATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | AGCAGGCAGACATTAGGCAGGTTTCCTTCAAAGAACAGTTCATCTAGAGGAAGATGGGACATATTCCAGTaGGGTGAAAGAAGTAGATCC | + |
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Preference number: 4 (lower is better) Translates to: SRQTLGRFPSKNSSSRGRWDIFQ*GERSRS Trigger: GGATCTACTTCTTTCACCCCACTGGAATATGTCCCA...TCTTCCTCTAGATGAACTGTTCTTTGAAGGAAACCTGCCTAATGTCTGCCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | GGCTTAAGCAAGCATGTAGGAATAGCGGGATCAAGAGATGCTACAAACTTCACAGGCAGCATCTTGCTTTaGGTTCATCTAGATAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: GLSKHVGIAGSRDATNFTGSILL*VHLDSN Trigger: ATTGCTATCTAGATGAACTCAAAGCAAGATGCTGCC...TGTGAAGTTTGTAGCATCTCTTGATCCCGCTATTCCTACATGCTTGCTTAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | CTAGCCCTCATCCTTAGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATTTACTAGAACAGACTTaGCCAGAGCTAGTCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: LALILRDFTSPLHKLRCDLLEQT*PELVMH Trigger: GTGCATGACTAGCTCTGGGCAAGTCTGTTCTAGTAA...ATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCTAAGGATGAGGGCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTACAAAGAACAAGATATaGGGGTATGGCCATGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVTKNKI*GYGHGA Trigger: GGCTCCATGGCCATACCCCCATATCTTGTTCTTTGT...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR GCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTTTCCAACCACAGCCTTaGTCTGAAAATCCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVFQPQP*SENPVA Trigger: AGCAACAGGATTTTCAGAGCAAGGCTGTGGTTGGAA...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTGCCTCCCAAGAGGATTaGCAGCTTACAATGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVASQED*QLTMIK Trigger: TTTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGC...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR TCA 90 bp | AGAGACTTTACATCTCCTTTACATAAACTTAGGTGTGATCGAAAGGGATCTGTTATGCATACCATCCCTTaGATTCCTAACACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RDFTSPLHKLRCDRKGSVMHTIP*IPNTFL Trigger: CAAGAAGGTGTTAGGAATTCAAGGGATGGTATGCAT...AACAGATCCCTTTCGATCACACCTAAGTTTATGTAAAGGAGATGTAAAGTCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CAA 90 bp | GCGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTCCCAAGAGGATTGGCAGCTTCCCACCCACAAGTTaGGCACCGGAGGTGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AKTQLSPSWEQPPKRIGSFPPTS*APEVFW Trigger: CCAGAACACCTCCGGTGCCAAACTTGTGGGTGGGAA...GCTGCCAATCCTCTTGGGAGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CAA 90 bp | GGGAGAAGAAGCCTGAGCAACATGATTAGAGGGGCCACTCCAAGGACAGGGCTGGTCCTCAGGTATCACTaGAGTGTCCAGGCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRRSLSNMIRGATPRTGLVLRYH*SVQAKA Trigger: GGCCTTTGCCTGGACACTCAAGTGATACCTGAGGAC...CAGCCCTGTCCTTGGAGTGGCCCCTCTAATCATGTTGCTCAGGCTTCTTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CAA 90 bp | GGGGAACATAACCAGGATGCAAATTCATTGTTCAAGGCATGCGAAGACTCAGCTCTCAGGTCCACCTTCTaGAGCAGGCAGACATTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GEHNQDANSLFKACEDSALRSTF*SRQTLG Trigger: GCCTAATGTCTGCCTGCTCAAGAAGGTGGACCTGAG...AGCTGAGTCTTCGCATGCCTTGAACAATGAATTTGCATCCTGGTTATGTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CAA 90 bp | ACTAGCCAGAGGAATCTGGCATGTCTGTTCGTCATAATGACGATCCCTAAAGAGCTGAATGACTCAGGCTaGGGACATATTCCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSQRNLACLFVIMTIPKELNDSG*GHIPVG Trigger: CCCCACTGGAATATGTCCCAAGCCTGAGTCATTCAG...CTCTTTAGGGATCGTCATTATGACGAACAGACATGCCAGATTCCTCTGGCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CAA 90 bp | ATTCATTGTTCAAGGCATGCGAAGACTCAGCTCAGTCCAAGCTGGGAGCAGCCTATTACTAGAACAGACTaGCCCAGAGCTAGTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHCSRHAKTQLSPSWEQPITRTD*PRASHA Trigger: TGCATGACTAGCTCTGGGCAAGTCTGTTCTAGTAAT...AGGCTGCTCCCAGCTTGGACTGAGCTGAGTCTTCGCATGCCTTGAACAATGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CAA 90 bp | GAGAGGTGGTACCTTGAATTACTAGAACAGACTTGCCCAGAGCTAGTCATGCACAGCCTCCCAAGAGGATaGGCAGCTTACAATGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ERWYLELLEQTCPELVMHSLPRG*AAYNDQ Trigger: TTGATCATTGTAAGCTGCCAATCCTCTTGGGAGGCT...GTGCATGACTAGCTCTGGGCAAGTCTGTTCTAGTAATTCAAGGTACCACCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS-3UTR CAA 90 bp | GAGAGGTGGTACCTTGAATTACTAGAACAGACTTGCCCAGAGCTAGTCATGCACCAGGATGCAAATTCATaGTTCAAGGCATGCGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ERWYLELLEQTCPELVMHQDANS*FKACED Trigger: GTCTTCGCATGCCTTGAACAATGAATTTGCATCCTG...GTGCATGACTAGCTCTGGGCAAGTCTGTTCTAGTAATTCAAGGTACCACCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485022.1 |
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| CDS GCA 72 bp | CAGGGTCACTCCAGCTCCCTTAGTCTCCATGCGCTTTaGATTGTCCATCTGATCACCAAACAAGGGCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: QGHSSSLSLHAL*IVHLITKQGHH Trigger: ATGATGCCCTTGTTTGGTGATCAGATGGACAATGCAAAGCGCATGGAGACTAAGGGAGCTGGAGTGACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373426.4 |
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