Pregenerated sensors for UGT1A5 (Homo sapiens)
Ensembl gene IDs: ENSG00000240224Ensembl transcript IDs: ENST00000373414.3
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCCCAAACAGGCCATGTTTCAGAGTAAGAAAAGTAATCTAGAATaGCAGCCTGTCTGCACGTCCTCTGAAAAATGGCACATGTCATCC | + |
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Preference number: 1 (lower is better) Translates to: TPKQAMFQSKKSNLE*QPVCTSSEKWHMSS Trigger: GGATGACATGTGCCATTTTTCAGAGGACGTGCAGACAGGCTGGCATTCTAGATTACTTTTCTTACTCTGAAACATGGCCTGTTTGGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373414.3 |
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| 3UTR GCA 90 bp | AGCACGACAGAGATGAGGACTGACCATTATTGGTTAAGGATCAATTaGAACCATCTGCAGAAGCCAAAAGATAAGATTAAAACTGCCATT | + |
|
Preference number: 1 (lower is better) Translates to: STTEMRTDHYWLRIN*NHLQKPKDKIKTAI Trigger: AATGGCAGTTTTAATCTTATCTTTTGGCTTCTGCAGATGGTTGCAATTGATCCTTAACCAATAATGGTCAGTCCTCATCTCTGTCGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373414.3 |
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| 3UTR TCA 72 bp | GTCTGCACGTCCTCTGAAAAATGGCACATGTCATCCTaGTCAAAGACACCAGAGGGGGCACGATACATATTC | + |
|
Preference number: 3 (lower is better) Translates to: VCTSSEKWHMSS*SKTPEGARYIF Trigger: GAATATGTATCGTGCCCCCTCTGGTGTCTTTGATCAGGATGACATGTGCCATTTTTCAGAGGACGTGCAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373414.3 |
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| 3UTR TCA 72 bp | AAGCTTCCCTTCTTTAAACACACAAGGTGGCACCTATaGAGCACGACAGAGATGAGGACTGACCATTATTGG | + |
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Preference number: 3 (lower is better) Translates to: KLPFFKHTRWHL*STTEMRTDHYW Trigger: CCAATAATGGTCAGTCCTCATCTCTGTCGTGCTTCATAGGTGCCACCTTGTGTGTTTAAAGAAGGGAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373414.3 |
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| 3UTR TCA 72 bp | AAGGTGGCACCTATGAAGCACGACAGAGATGAGGACTaGCCATTATTGGTTAAGGATCAATTGCAACCATCT | + |
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Preference number: 3 (lower is better) Translates to: KVAPMKHDRDED*PLLVKDQLQPS Trigger: AGATGGTTGCAATTGATCCTTAACCAATAATGGTCAGTCCTCATCTCTGTCGTGCTTCATAGGTGCCACCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373414.3 |
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