Pregenerated sensors for UGT1A4 (Homo sapiens)
Ensembl gene IDs: ENSG00000244474Ensembl transcript IDs: ENST00000373409.8, ENST00000450233.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTAAAGGTGATGAAGGCCACTGTCAGCACGACGGCCAAGAGGAAACCAATCACGGTGAGGTCGTGGGCTaGGGGGCGCAGGTGTGGCGC | + |
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Preference number: 2 (lower is better) Translates to: FKGDEGHCQHDGQEETNHGEVVG*GAQVWR Trigger: GCGCCACACCTGCGCCCCGCAGCCCACGACCTCACC...GTGATTGGTTTCCTCTTGGCCGTCGTGCTGACAGTGGCCTTCATCACCTTTAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| 3UTR-3UTR TCA 90 bp | ACGACGGCCAAGAGGAAACCAATCACGTCCAAGGAATGGTACTGGTACCAGGTGACCGGGCGGTCCTTGTaGAGGCTGGAGAGGCGCATG | + |
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Preference number: 2 (lower is better) Translates to: TTAKRKPITSKEWYWYQVTGRSL*RLERRM Trigger: CATGCGCCTCTCCAGCCTTCACAAGGACCGCCCGGT...CACCTGGTACCAGTACCATTCCTTGGACGTGATTGGTTTCCTCTTGGCCGTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| 3UTR-3UTR TCA 90 bp | AGGACTGACCATTATTGGTTAAGGATCAATTGCAACCATCTGCAGAAGCCAAAAGGCTGGAGAGGCGCATaGTGTTCTCCTTGTAACTCA | + |
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Preference number: 2 (lower is better) Translates to: RTDHYWLRINCNHLQKPKGWRGA*CSPCNS Trigger: TGAGTTACAAGGAGAACATCATGCGCCTCTCCAGCC...TTTTGGCTTCTGCAGATGGTTGCAATTGATCCTTAACCAATAATGGTCAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| 3UTR-3UTR CCA 90 bp | AGGACTGACCATTATTGGTTAAGGATCAATTGCAACCATCTGCAGAAGCCAAAACTTGTAACTCAAAGGTaGGAAGTCAGTCATCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RTDHYWLRINCNHLQKPKLVTQR*EVSHQS Trigger: GGACTGATGACTGACTTCCCACCTTTGAGTTACAAG...TTTTGGCTTCTGCAGATGGTTGCAATTGATCCTTAACCAATAATGGTCAGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| 3UTR-3UTR CAA 90 bp | GCTGGAGAGGCGCATGATGTTCTCCTTGTAACTCAAAGGTGGGAAGTCAGTCATCTCCCCTGTTGTCCCTaGCTCAAGCTGGTGTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: AGEAHDVLLVTQRWEVSHLPCCP*LKLVCP Trigger: GGGACACACCAGCTTGAGCAAGGGACAACAGGGGAG...ATGACTGACTTCCCACCTTTGAGTTACAAGGAGAACATCATGCGCCTCTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| 3UTR-3UTR CAA 90 bp | GACACCAGAGGGGGCACGATACATATTCAAATATCTTTACTGACTAGCGAGTCTAGGTGTGGCGCGCCCTaGTGCCTCATCACAAACTCC | + |
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Preference number: 3 (lower is better) Translates to: DTRGGTIHIQISLLTSESRCGAP*CLITNS Trigger: GGAGTTTGTGATGAGGCACAAGGGCGCGCCACACCT...AGACTCGCTAGTCAGTAAAGATATTTGAATATGTATCGTGCCCCCTCTGGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR CCA 90 bp | TGCAGTAGGGGCAGCCGTGGGACCACCTTTGAATCCCGCACTCCCAAACAGGCCGTCCCTTGCTCAAGCTaGTGTGTCCCCGTGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: CSRGSRGTTFESRTPKQAVPCSS*CVPVFR Trigger: ACGGAACACGGGGACACACCAGCTTGAGCAAGGGAC...GGCCTGTTTGGGAGTGCGGGATTCAAAGGTGGTCCCACGGCTGCCCCTACTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR GCA 90 bp | GCACGACGGCCAAGAGGAAACCAATCACGTCCAAGGAATGGTACTGGTACCAGGTCCCCTGTTGTCCCTTaGTCAAGCTGGTGTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ARRPRGNQSRPRNGTGTRSPVVP*SSWCVP Trigger: GGGGACACACCAGCTTGAGCAAGGGACAACAGGGGA...CCTGGTACCAGTACCATTCCTTGGACGTGATTGGTTTCCTCTTGGCCGTCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR TCA 90 bp | GCAGTAGGGGCAGCCGTGGGACCACCTTTGAATCCCGCACTCCCAAACAGGCCATCCACACAACACCTATaGAGGGCCAAAGATACATTG | + |
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Preference number: 4 (lower is better) Translates to: AVGAAVGPPLNPALPNRPSTQHL*RAKDTL Trigger: CAATGTATCTTTGGCCCTTCATAGGTGTTGTGTGGA...TGGCCTGTTTGGGAGTGCGGGATTCAAAGGTGGTCCCACGGCTGCCCCTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373409.8 ENST00000450233.1 |
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| CDS-3UTR CCA 90 bp | TCCCCTGTTGTCCCTTGCTCAAGCTGGTGTGTCCCCGTGTTCCGTCTCCTCTCATTCCTTCTGGGTCCATaGAACAGCATAGGCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SPVVPCSSWCVPVFRLLSFLLGP*NSIGCQ Trigger: CTGACAGCCTATGCTGTTCCATGGACCCAGAAGGAA...TGAGAGGAGACGGAACACGGGGACACACCAGCTTGAGCAAGGGACAACAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR TCA 90 bp | TTGTCCCTTGCTCAAGCTGGTGTGTCCCCGTGTTCCGTCTCCTCTCATCTGAACGGCTGGAGAGGCGCATaGTGTTCTCCTTGTAACTCA | + |
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Preference number: 4 (lower is better) Translates to: LSLAQAGVSPCSVSSHLNGWRGA*CSPCNS Trigger: TGAGTTACAAGGAGAACATCATGCGCCTCTCCAGCC...GTTCAGATGAGAGGAGACGGAACACGGGGACACACCAGCTTGAGCAAGGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR GCA 90 bp | TGCAGTAGGGGCAGCCGTGGGACCACCTTTGAATCCCGCACTCCCAAACAGGCCTGTCTTCCTGACTGCTaGTTCTTTCTTTTGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: CSRGSRGTTFESRTPKQACLPDC*FFLLSL Trigger: CAATGACAAAAGAAAGAAGCAGCAGTCAGGAAGACA...GGCCTGTTTGGGAGTGCGGGATTCAAAGGTGGTCCCACGGCTGCCCCTACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR TCA 90 bp | TTTAAAGGTGATGAAGGCCACTGTCAGCACGACGGCCAAGAGGAAACCAATCACCCGTCTCCTCTCATCTaGACATGCTCCAGCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FKGDEGHCQHDGQEETNHPSPLI*TCSSSS Trigger: TGAAGAGCTGGAGCATGTTCAGATGAGAGGAGACGG...GTGATTGGTTTCCTCTTGGCCGTCGTGCTGACAGTGGCCTTCATCACCTTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR CCA 90 bp | AAGATAAGATTAAAACTGCCATTTGCAGTAGGGGCAGCCGTGGGACCACCTTTGCTTGTAACTCAAAGGTaGGAAGTCAGTCATCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: KIRLKLPFAVGAAVGPPLLVTQR*EVSHQS Trigger: GGACTGATGACTGACTTCCCACCTTTGAGTTACAAG...CAAAGGTGGTCCCACGGCTGCCCCTACTGCAAATGGCAGTTTTAATCTTATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR CCA 90 bp | GGGGGCACGATACATATTCAAATATCTTTACTGACTAGCGAGTCTATTATTTTTTTCCTTCTGGGTCCATaGAACAGCATAGGCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GGTIHIQISLLTSESIIFFLLGP*NSIGCQ Trigger: CTGACAGCCTATGCTGTTCCATGGACCCAGAAGGAA...AAAAATAATAGACTCGCTAGTCAGTAAAGATATTTGAATATGTATCGTGCCCCC 41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373409.8 ENST00000450233.1 |
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| CDS-3UTR TCA 90 bp | GGGGGCACGATACATATTCAAATATCTTTACTGACTAGCGAGTCTATTATTTTTTCCACACAACACCTATaGAGGGCCAAAGATACATTG | + |
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Preference number: 4 (lower is better) Translates to: GGTIHIQISLLTSESIIFSTQHL*RAKDTL Trigger: CAATGTATCTTTGGCCCTTCATAGGTGTTGTGTGGA...AAAAATAATAGACTCGCTAGTCAGTAAAGATATTTGAATATGTATCGTGCCCCC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000373409.8 ENST00000450233.1 |
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| CDS-3UTR CAA 90 bp | CGTGGGACCACCTTTGAATCCCGCACTCCCAAACAGGCCATGTTTCAGAGTAAGATCAGTCCTCCCCTGTaGTCCCTTGCTCAAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RGTTFESRTPKQAMFQSKISPPL*SLAQAG Trigger: ACCAGCTTGAGCAAGGGACAACAGGGGAGGACTGAT...CTTACTCTGAAACATGGCCTGTTTGGGAGTGCGGGATTCAAAGGTGGTCCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR CAA 90 bp | ACGACGGCCAAGAGGAAACCAATCACGTCCAAGGAATGGTACTGGTACCAGGTGTGTTTCAAAGAACCCTaGAGTGTAGCCCAGCGTAAC | + |
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Preference number: 5 (lower is better) Translates to: TTAKRKPITSKEWYWYQVCFKEP*SVAQRN Trigger: GTTACGCTGGGCTACACTCAAGGGTTCTTTGAAACA...CACCTGGTACCAGTACCATTCCTTGGACGTGATTGGTTTCCTCTTGGCCGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR CAA 90 bp | AGGACTGACCATTATTGGTTAAGGATCAATTGCAACCATCTGCAGAAGCCAAAACTCCCCTGTTGTCCCTaGCTCAAGCTGGTGTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: RTDHYWLRINCNHLQKPKLPCCP*LKLVCP Trigger: GGGACACACCAGCTTGAGCAAGGGACAACAGGGGAG...TTTTGGCTTCTGCAGATGGTTGCAATTGATCCTTAACCAATAATGGTCAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450233.1 |
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| CDS-3UTR CAA 90 bp | GACACCAGAGGGGGCACGATACATATTCAAATATCTTTACTGACTAGCGAGTCTTGTTTCAAAGAACCCTaGAGTGTAGCCCAGCGTAAC | + |
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Preference number: 5 (lower is better) Translates to: DTRGGTIHIQISLLTSESCFKEP*SVAQRN Trigger: GTTACGCTGGGCTACACTCAAGGGTTCTTTGAAACA...AGACTCGCTAGTCAGTAAAGATATTTGAATATGTATCGTGCCCCCTCTGGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373409.8 ENST00000450233.1 |
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