RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UGGT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136731

Ensembl transcript IDs: ENST00000259253.11, ENST00000376723.7, ENST00000418197.1, ENST00000430075.5, ENST00000438277.5, ENST00000465836.1, ENST00000488439.1

Found 935 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGGTGCACGTTGGAAGACAGAGCGTGCCTGTCTATGCCAGTGCTaGTGTGCCCTGCAGCCTGGCAGATGGAGTCGGATGCTGGGGCCT +
Preference number: 1 (lower is better)
Translates to: AGARWKTERACLCQC*CALQPGRWSRMLGP
Trigger: AGGCCCCAGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAACGTGCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CCA 90 bp GGAGGGCACAAGGATGTTGGCGTAAACCTGGAGGTGTGTGGACCTTaGACAGAGCTTCCGCCGGCCAGACCCAGGGCAGGGTGGGCATCT +
Preference number: 1 (lower is better)
Translates to: GGHKDVGVNLEVCGP*TELPPARPRAGWAS
Trigger: AGATGCCCACCCTGCCCTGGGTCTGGCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTTACGCCAACATCCTTGTGCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CCA 90 bp AAGGTGGGGAGGGCACAAGGATGTTGGCGTAAACCTGGAGGTGTGTaGACCTTGGACAGAGCTTCCGCCGGCCAGACCCAGGGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: KVGRAQGCWRKPGGV*TLDRASAGQTQGRV
Trigger: CACCCTGCCCTGGGTCTGGCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTTACGCCAACATCCTTGTGCCCTCCCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CCA 90 bp GACAGAGCGTGCCTGTCTATGCCAGTGCTGCTGTGCCCTGCAGCCTaGCAGATGGAGTCGGATGCTGGGGCCTCATGCCCACTTAGGCCA +
Preference number: 1 (lower is better)
Translates to: DRACLSMPVLLCPAA*QMESDAGASCPLRP
Trigger: TGGCCTAAGTGGGCATGAGGCCCCAGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGCACGCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 90 bp GTTGGAAGACAGAGCGTGCCTGTCTATGCCAGTGCTGCTGTGCCCTaGAGCCTGGCAGATGGAGTCGGATGCTGGGGCCTCATGCCCACT +
Preference number: 1 (lower is better)
Translates to: VGRQSVPVYASAAVP*SLADGVGCWGLMPT
Trigger: AGTGGGCATGAGGCCCCAGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 90 bp TGCACGTTGGAAGACAGAGCGTGCCTGTCTATGCCAGTGCTGCTGTaGCCTGCAGCCTGGCAGATGGAGTCGGATGCTGGGGCCTCATGC +
Preference number: 1 (lower is better)
Translates to: CTLEDRACLSMPVLL*PAAWQMESDAGASC
Trigger: GCATGAGGCCCCAGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAACGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 90 bp CTGTGCCCTGCAGCCTGGCAGATGGAGTCGGATGCTGGGGCCTCATaGCCACTTAGGCCAATAACATACTCAAGACTCTACAGCCCGTTC +
Preference number: 1 (lower is better)
Translates to: LCPAAWQMESDAGAS*PLRPITYSRLYSPF
Trigger: GAACGGGCTGTAGAGTCTTGAGTATGTTATTGGCCTAAGTGGGCATGAGGCCCCAGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 90 bp CCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTaGAGCCCCCTCCTTGGCCATTTTGGTGATGAAGTTCTTAGCAGC +
Preference number: 1 (lower is better)
Translates to: PNRELRNVSSCSQGL*SPLLGHFGDEVLSS
Trigger: GCTGCTAAGAACTTCATCACCAAAATGGCCAAGGAGGGGGCTGCAGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR GCA 90 bp GCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTaGCTGTCTATGCCAGTGCTGCTGTGCCCTGCAGCCTGGCAGATG +
Preference number: 1 (lower is better)
Translates to: AKYVRKGWCTLEDRA*LSMPVLLCPAAWQM
Trigger: CATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR TCA 90 bp GTGCTCCCGTTTCTTTCTCCTTCTGAAAGCGGATCTGTAGCTGTTTaGTCTCTTGGTCGTAGTCCTGCCACTCCGGGACAATCCGCACAG +
Preference number: 1 (lower is better)
Translates to: VLPFLSPSESGSVAV*SLGRSPATPGQSAQ
Trigger: CTGTGCGGATTGTCCCGGAGTGGCAGGACTACGACCAAGAGATCAAACAGCTACAGATCCGCTTTCAGAAGGAGAAAGAAACGGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR CCA 90 bp CCCAGTGACTTGAGTATTTGCTATGCAACCTCCTGGACGAGAAACTaGGAAAAGGCACACTTCCGCCCACAGTTGTGGACAGCAGCAGTC +
Preference number: 1 (lower is better)
Translates to: PSDLSICYATSWTRN*EKAHFRPQLWTAAV
Trigger: GACTGCTGCTGTCCACAACTGTGGGCGGAAGTGTGCCTTTTCCCAGTTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAGTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR TCA 90 bp TTCACCAGCAAAGTATGCCCTGAGGGGCAACACTGGCTGTGGAAGTaGAGACACACAAAGCAGGGACTAAAGGCAAATGGGGCTTCACGA +
Preference number: 1 (lower is better)
Translates to: FTSKVCPEGQHWLWK*RHTKQGLKANGASR
Trigger: TCGTGAAGCCCCATTTGCCTTTAGTCCCTGCTTTGTGTGTCTTCACTTCCACAGCCAGTGTTGCCCCTCAGGGCATACTTTGCTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR TCA 90 bp AACATACTCAAGACTCTACAGCCCGTTCACCAGCAAAGTATGCCCTaGGGGGCAACACTGGCTGTGGAAGTGAAGACACACAAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: NILKTLQPVHQQSMP*GATLAVEVKTHKAG
Trigger: CCCTGCTTTGTGTGTCTTCACTTCCACAGCCAGTGTTGCCCCTCAGGGCATACTTTGCTGGTGAACGGGCTGTAGAGTCTTGAGTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CCA 90 bp TCCCACTGCAACCTTCCACAGCTAGCCTCTGCACTGCTGGGTATCTaGGAAAGACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAAC +
Preference number: 1 (lower is better)
Translates to: SHCNLPQLASALLGI*ERLRRGPFACKSSN
Trigger: GTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGTCTTTCCCAGATACCCAGCAGTGCAGAGGCTAGCTGTGGAAGGTTGCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR GCA 90 bp TCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATaGTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATC +
Preference number: 1 (lower is better)
Translates to: SQRSSGHQSTEVRIK*SESKGVALLPSRLI
Trigger: GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR GCA 90 bp GATCTCTTGGTCGTAGTCCTGCCACTCCGGGACAATCCGCACAGCTaGTTCCAGTTTCGGCTCTTTGGTCATCGGATTATTACACAAATC +
Preference number: 1 (lower is better)
Translates to: DLLVVVLPLRDNPHS*FQFRLFGHRIITQI
Trigger: GATTTGTGTAATAATCCGATGACCAAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTCCCGGAGTGGCAGGACTACGACCAAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR TCA 90 bp CTAACTCATCAGGGTCTAGCTGTTCCCTTTCAAAGGGCATTCCATTaGACAGCACAACGGGCAGAGGTCCAACTCCAGTCTGCTCATAGT +
Preference number: 1 (lower is better)
Translates to: LTHQGLAVPFQRAFH*TAQRAEVQLQSAHS
Trigger: ACTATGAGCAGACTGGAGTTGGACCTCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTGAAAGGGAACAGCTAGACCCTGATGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp GAGCCAAAACCAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTaGCAGGGTCAACGACAGCCACAACATCAAAGTATGTCTCCCCTT +
Preference number: 1 (lower is better)
Translates to: EPKPRAKEQVSVLLW*QGQRQPQHQSMSPL
Trigger: AAGGGGAGACATACTTTGATGTTGTGGCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTGGTTTTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp GGTGCTATGGGGGCCAGCATTTGGAAAGCATATATCCCAGTGACTTaGGTATTTGCTATGCAACCTCCTGGACGAGAAACTGGGAAAAGG +
Preference number: 1 (lower is better)
Translates to: GAMGASIWKAYIPVT*VFAMQPPGRETGKR
Trigger: CCTTTTCCCAGTTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAGTCACTGGGATATATGCTTTCCAAATGCTGGCCCCCATAGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR GCA 90 bp TGCAACCCACCCCCATCCTGGCCCAAAATTAATTTGCCCAGCCACTaGACCAAACCAGCCTTGACACACAATTGTTGGTTGGATTTCAAT +
Preference number: 1 (lower is better)
Translates to: CNPPPSWPKINLPSH*TKPALTHNCWLDFN
Trigger: ATTGAAATCCAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCCAGGATGGGGGTGGGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 90 bp GGGGGCCAGCATTTGGAAAGCATATATCCCAGTGACTTGAGTATTTaGTATGCAACCTCCTGGACGAGAAACTGGGAAAAGGCACACTTC +
Preference number: 1 (lower is better)
Translates to: GGQHLESIYPSDLSI*YATSWTRNWEKAHF
Trigger: GAAGTGTGCCTTTTCCCAGTTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAGTCACTGGGATATATGCTTTCCAAATGCTGGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR GCA 90 bp GTTCTTAGCAGCGTTGGAAGTCTGAGTTTGGAGAGCTGCCCAGATTaGTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGG +
Preference number: 1 (lower is better)
Translates to: VLSSVGSLSLESCPD*SGDLSVLIAYLFGR
Trigger: CCTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTGCTAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 90 bp GAAAGCATATATCCCAGTGACTTGAGTATTTGCTATGCAACCTCCTaGACGAGAAACTGGGAAAAGGCACACTTCCGCCCACAGTTGTGG +
Preference number: 1 (lower is better)
Translates to: ESIYPSDLSICYATS*TRNWEKAHFRPQLW
Trigger: CCACAACTGTGGGCGGAAGTGTGCCTTTTCCCAGTTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAGTCACTGGGATATATGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CCA 90 bp AATATCTTCAGAGCGTCCCTTCCTAAGTCTGAGGATCCAAGCTCCTaGGTTGGCTTTCAGCTGAAAGTAGCCCAGATTGGCCATAACAAT +
Preference number: 1 (lower is better)
Translates to: NIFRASLPKSEDPSS*VGFQLKVAQIGHNN
Trigger: ATTGTTATGGCCAATCTGGGCTACTTTCAGCTGAAAGCCAACCCAGGAGCTTGGATCCTCAGACTTAGGAAGGGACGCTCTGAAGATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR TCA 90 bp CCTTTAAAGGTGCCATTTCATTGGTGCTCTCTACAAGATGCTTTCTaGGTTCTTTCAACTGTCCCTCCAGGTCGGGGTGCAGATCTCTTA +
Preference number: 1 (lower is better)
Translates to: PLKVPFHWCSLQDAF*VLSTVPPGRGADLL
Trigger: TAAGAGATCTGCACCCCGACCTGGAGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCACCAATGAAATGGCACCTTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp CCGCTCTTTGGAAGAAGGTGGTGGTCTCCAGGATTTTATGCATTGTaGTGGTTTCTAACTCATCAGGGTCTAGCTGTTCCCTTTCAAAGG +
Preference number: 1 (lower is better)
Translates to: PLFGRRWWSPGFYAL*WFLTHQGLAVPFQR
Trigger: CCTTTGAAAGGGAACAGCTAGACCCTGATGAGTTAGAAACCATCACAATGCATAAAATCCTGGAGACCACCACCTTCTTCCAAAGAGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR GCA 90 bp AGTACCAGGAAGTTCATTCTCAATTCCCTTCGAACGCAGAGATTCTaGAGACATTTAAAAGCCCAATGCTGTTCCCAAGCAAGAGGCAGC +
Preference number: 1 (lower is better)
Translates to: STRKFILNSLRTQRF*RHLKAQCCSQARGS
Trigger: GCTGCCTCTTGCTTGGGAACAGCATTGGGCTTTTAAATGTCTGCAGAATCTCTGCGTTCGAAGGGAATTGAGAATGAACTTCCTGGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR GCA 90 bp CACAGATTAAACATAAGAGGCTTGGTAGAAAGACATGGGGAAAGGTaGTATGGGGGCCAGCATTTGGAAAGCATATATCCCAGTGACTTG +
Preference number: 1 (lower is better)
Translates to: HRLNIRGLVERHGER*YGGQHLESIYPSDL
Trigger: CAAGTCACTGGGATATATGCTTTCCAAATGCTGGCCCCCATAGCACCTTTCCCCATGTCTTTCTACCAAGCCTCTTATGTTTAATCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR GCA 90 bp AAGTACACCGCTCTTTGGAAGAAGGTGGTGGTCTCCAGGATTTTATaGATTGTGATGGTTTCTAACTCATCAGGGTCTAGCTGTTCCCTT +
Preference number: 1 (lower is better)
Translates to: KYTALWKKVVVSRIL*IVMVSNSSGSSCSL
Trigger: AAGGGAACAGCTAGACCCTGATGAGTTAGAAACCATCACAATGCATAAAATCCTGGAGACCACCACCTTCTTCCAAAGAGCGGTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp TGGAGGTTCATCAGCTGCTATCTGCTGGAAGGCTTGGATTGTAGCTaGGTAAGAACGAAGGGACAGACAAAATTTAAACAAATTCTGCTG +
Preference number: 1 (lower is better)
Translates to: WRFISCYLLEGLDCS*VRTKGQTKFKQILL
Trigger: CAGCAGAATTTGTTTAAATTTTGTCTGTCCCTTCGTTCTTACTCAGCTACAATCCAAGCCTTCCAGCAGATAGCAGCTGATGAACCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR TCA 90 bp CTCTGTCCCTTCTTCAGCTTCAGAACATCCCTGCAGTACACGGCATaGGACAAAATGAAATCCATTTTGGAAGACTCAAAGACCTCTTTA +
Preference number: 1 (lower is better)
Translates to: LCPFFSFRTSLQYTA*DKMKSILEDSKTSL
Trigger: TAAAGAGGTCTTTGAGTCTTCCAAAATGGATTTCATTTTGTCTCATGCCGTGTACTGCAGGGATGTTCTGAAGCTGAAGAAGGGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp CCTGAGGTTTTTAAGATGATATTTTCGAGGAGGTGGAAATCGTCTTaGTTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCA +
Preference number: 1 (lower is better)
Translates to: PEVFKMIFSRRWKSS*LKSSLSSSGPMILP
Trigger: TGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTCCTCGAAAATATCATCTTAAAAACCTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR GCA 90 bp AGCTTCAAAACATTATGCAGAGAAAGGCCTTCTATTCCCAATCTATaGAGACCCTCCATTACCCGAGCTTCATTCCTCAACACATCAAAC +
Preference number: 1 (lower is better)
Translates to: SFKTLCRERPSIPNL*RPSITRASFLNTSN
Trigger: GTTTGATGTGTTGAGGAATGAAGCTCGGGTAATGGAGGGTCTGCATAGATTGGGAATAGAAGGCCTTTCTCTGCATAATGTTTTGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp TCCCTTGAAATACTTCTGATTCTCTTCCACTTCGGTTCTAAGTTCTaGGCTCACAGCTGTTTTTGTTATTGCTCTGGCTTTGGTAGGAAA +
Preference number: 1 (lower is better)
Translates to: SLEILLILFHFGSKF*AHSCFCYCSGFGRK
Trigger: TTTCCTACCAAAGCCAGAGCAATAACAAAAACAGCTGTGAGCTCAGAACTTAGAACCGAAGTGGAAGAGAATCAGAAGTATTTCAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 90 bp TCGTTCAGCTGTCAAAATCCTAGAATTGATTCGTGGAACAACATTTaGCTGATTCATGATATACTCTACCACATCTTGATCATGGGGCAG +
Preference number: 1 (lower is better)
Translates to: SFSCQNPRIDSWNNI*LIHDILYHILIMGQ
Trigger: CTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAATCAGCCAAATGTTGTTCCACGAATCAATTCTAGGATTTTGACAGCTGAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp AAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTaGCCACATGTTCAACTTTCACTTTTTCTCCAGTCCTCACCTTGT +
Preference number: 1 (lower is better)
Translates to: KCYSLLHTDISSPGH*PHVQLSLFLQSSPC
Trigger: ACAAGGTGAGGACTGGAGAAAAAGTGAAAGTTGAACATGTGGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 90 bp ATCCAGGTAGTCTCGTTCAGCTGTCAAAATCCTAGAATTGATTCGTaGAACAACATTTGGCTGATTCATGATATACTCTACCACATCTTG +
Preference number: 1 (lower is better)
Translates to: IQVVSFSCQNPRIDS*NNIWLIHDILYHIL
Trigger: CAAGATGTGGTAGAGTATATCATGAATCAGCCAAATGTTGTTCCACGAATCAATTCTAGGATTTTGACAGCTGAACGAGACTACCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp AACACATCAAACAGACTGAATATATCCTGTGTATCTAAATCCATGTaGAGTCCATTGATGAAGAGGGCTGAATCTCCAGGTTGTAATCCT +
Preference number: 1 (lower is better)
Translates to: NTSNRLNISCVSKSM*SPLMKRAESPGCNP
Trigger: AGGATTACAACCTGGAGATTCAGCCCTCTTCATCAATGGACTTCACATGGATTTAGATACACAGGATATATTCAGTCTGTTTGATGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR GCA 90 bp TGGTATATGATTACTAAGGAACATCTCAGCTGTGTTCATCAACTCTaGTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATATTATG +
Preference number: 1 (lower is better)
Translates to: WYMITKEHLSCVHQL*CGLMCRINYENHIM
Trigger: CATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATGAACACAGCTGAGATGTTCCTTAGTAATCATATACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 90 bp AAGCAGACAGGCAAGCATCTATGTGTTCAATTCGAAATGCAACAATaGCAGATGTACAACTTTACCACTCTTAAAGAAACTAACATGCCA +
Preference number: 1 (lower is better)
Translates to: KQTGKHLCVQFEMQQ*QMYNFTTLKETNMP
Trigger: TGGCATGTTAGTTTCTTTAAGAGTGGTAAAGTTGTACATCTGTCATTGTTGCATTTCGAATTGAACACATAGATGCTTGCCTGTCTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR GCA 90 bp ATTCACCCAAGCAGACAGGCAAGCATCTATGTGTTCAATTCGAAATaGAACAATGACAGATGTACAACTTTACCACTCTTAAAGAAACTA +
Preference number: 1 (lower is better)
Translates to: IHPSRQASIYVFNSK*NNDRCTTLPLLKKL
Trigger: TAGTTTCTTTAAGAGTGGTAAAGTTGTACATCTGTCATTGTTGCATTTCGAATTGAACACATAGATGCTTGCCTGTCTGCTTGGGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 90 bp GGGAGGGCACAAGGATGTTGGCGTAAACCTGGAGGTGTGTGGACCTaGGACAGAGCTTCCGCCGGCCAGACCCAGGGCAGGGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: GRAQGCWRKPGGVWT*DRASAGQTQGRVGI
Trigger: GATGCCCACCCTGCCCTGGGTCTGGCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTTACGCCAACATCCTTGTGCCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR CCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTCTGACCCTGACGGGCTaGATGCGAGAGGGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: SIPPTENSAMSAPAARASLTLTG*MREGLS
Trigger: ACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTGCAGCGTTGGAAGTCTaGGTTTGGAGAGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: SIPPTENSAMSAPAARASAALEV*VWRAAQ
Trigger: CTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTGC...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAGGCAGGGTGGGCATCTaGAGTGCAGCGCAGGCCGCA +
Preference number: 2 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLGRVGI*SAAQAA
Trigger: TGCGGCCTGCGCTGCACTGCAGATGCCCACCCTGCC...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR TCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCTCTTTCCAGCTGCTCTaGACAGAGGGGCAGGGCGGG +
Preference number: 2 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSSFQLL*TEGQGG
Trigger: CCCGCCCTGCCCCTCTGTTCAGAGCAGCTGGAAAGA...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR GCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAGGCAGGGTGGGCATCTaGAGTGCAGCGCAGGCCGCA +
Preference number: 2 (lower is better)
Translates to: QSFNPKDPVATRVQKSESGRVGI*SAAQAA
Trigger: TGCGGCCTGCGCTGCACTGCAGATGCCCACCCTGCC...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR GCA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTGTCTACGGCATAGTCTaGCTCAGAGGGCTGGATGTT +
Preference number: 2 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPVYGIV*LRGLDV
Trigger: AACATCCAGCCCTCTGAGGCAGACTATGCCGTAGAC...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTAAGTACACCGCTCTTTaGAAGAAGGTGGTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: SIPPTENSAMSAPAARASKYTAL*KKVVVS
Trigger: GGAGACCACCACCTTCTTCCAAAGAGCGGTGTACTT...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 90 bp CCCTACCCTCACTGCAACCCACCCCCATCCTGGCCCAAAATTAATTaGCCCAGCCACTGCACCAAACCAGCCTTGACACACAATTGTTGG +
Preference number: 2 (lower is better)
Translates to: PYPHCNPPPSWPKIN*PSHCTKPALTHNCW
Trigger: CCAACAATTGTGTGTCAAGGCTGGTTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCCAGGATGGGGGTGGGTTGCAGTGAGGGTAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR GCA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCGGCTCTAGCTGGCCCTaGTTTCCGAGACAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: STQGLGPHNQMKTHSGRAGSSWP*FPRQCS
Trigger: GCTGCACTGTCTCGGAAAGCAGGGCCAGCTAGAGCC...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR GCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTAATGGGGCTTCACGATaGAGCGACATGAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: SIPPTENSAMSAPAARASNGASR*SDMKTE
Trigger: TTCTGTCTTCATGTCGCTGCATCGTGAAGCCCCATT...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATATGCCAGTGCTGCTGTaGCCTGCAGCCTGGCAGATG +
Preference number: 2 (lower is better)
Translates to: TQERTFCLQILKLLTSGDMPVLL*PAAWQM
Trigger: CATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCAT...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR GCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATTGCAGCCAGGGCCTCTaGAGCCCCCTCCTTGGCCAT +
Preference number: 2 (lower is better)
Translates to: EVEIVLIKELTILQWPNDCSQGL*SPLLGH
Trigger: ATGGCCAAGGAGGGGGCTGCAGAGGCCCTGGCTGCA...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCCAGCAAAGTATGCCCTaGGGGGCAACACTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: STQGLGPHNQMKTHSGRAQQSMP*GATLAV
Trigger: CACAGCCAGTGTTGCCCCTCAGGGCATACTTTGCTG...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR GCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGGCCCAAAATTAATTTaGCCAGCCACTGCACCAAAC +
Preference number: 2 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKGPKLI*PATAPN
Trigger: GTTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCC...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR GCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTTCCCTACCCTCACTaGAACCCACCCCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLFPYPH*NPPPSW
Trigger: CCAGGATGGGGGTGGGTTGCAGTGAGGGTAGGGAAA...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR GCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGGCAGATGGAGTCGGATaGTGGGGCCTCATGCCCACT +
Preference number: 2 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQADGVG*WGLMPT
Trigger: AGTGGGCATGAGGCCCCAGCATCCGACTCCATCTGC...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp ACTGGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCAGCCTGTCTATGCCAGTaGTGCTGTGCCCTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: TGTRFLDLLLVALTEEHPACLCQ*CCALQP
Trigger: AGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGC...TGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGGAGCGTGCCTGTCTATaGCAGTGCTGCTGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQERACL*QCCCAL
Trigger: CAGGGCACAGCAGCACTGGCATAGACAGGCACGCTC...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTGCATCATACAGTAACTaGCGTCCAGAAGGGCTATCA +
Preference number: 2 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPASYSN*RPEGLS
Trigger: TGATAGCCCTTCTGGACGGCAGTTACTGTATGATGC...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTCCGCCCACAGTTGTaGACAGCAGCAGTCACCCGT +
Preference number: 2 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLFRPQL*TAAVTR
Trigger: ACGGGTGACTGCTGCTGTCCACAACTGTGGGCGGAA...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTTCATCAACTCTGCTGTaGTCTCATGTGCAGGATCAA +
Preference number: 2 (lower is better)
Translates to: SIPPTENSAMSAPAARASSSTLL*SHVQDQ
Trigger: TTGATCCTGCACATGAGACCACAGCAGAGTTGATGA...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGAAAGGTCCTTCAGGATaGCTGGGAGGCTTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQKGPSG*LGGFLG
Trigger: GCCTAGGAAGCCTCCCAGTCATCCTGAAGGACCTTT...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR GCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCTTCACCAGCAAAGTATaGCCTGAGGGGCAACACTGG +
Preference number: 2 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSFTSKV*PEGQHW
Trigger: CCAGTGTTGCCCCTCAGGGCATACTTTGCTGGTGAA...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCATGCACCTAATGCGTTaGAAGAGAAGGTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSMHLMR*KRRWGG
Trigger: CCCTCCCCACCTTCTCTTCCAACGCATTAGGTGCAT...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCAGGCCGCAGGTAAACTaGGGTAAGGAAGAACATGGT +
Preference number: 2 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSRPQVN*GKEEHG
Trigger: ACCATGTTCTTCCTTACCTCAGTTTACCTGCGGCCT...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp GATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACCGCTCTAAAGGTCCTTCAGGATaGCTGGGAGGCTTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: DILYHILIMGQFTQVHRSKGPSG*LGGFLG
Trigger: GCCTAGGAAGCCTCCCAGTCATCCTGAAGGACCTTT...AGAGCGGTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTGGAACAACATTTGGCTaGTTCATGATATACTCTACC +
Preference number: 2 (lower is better)
Translates to: SIPPTENSAMSAPAARASGTTFG*FMIYST
Trigger: GGTAGAGTATATCATGAATCAGCCAAATGTTGTTCC...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTAACTGGCCCAGTACCCTaGCTTCCAGAACCTGTAGCC +
Preference number: 2 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALTGPVP*LPEPVA
Trigger: GGCTACAGGTTCTGGAAGTCAGGGTACTGGGCCAGT...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAAGGTGTGGCACTCCTaGCCAGCCGGCTTATCAGCA +
Preference number: 2 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYKVWHS*PAGLSA
Trigger: TGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTT...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR-3UTR CCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGGGGACTAAAGGCAAATaGGGCTTCACGATGCAGCGA +
Preference number: 2 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQGTKGK*GFTMQR
Trigger: TCGCTGCATCGTGAAGCCCCATTTGCCTTTAGTCCC...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGGGTCCTAGGCCATTCTaGAAGCAAGCTGGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQGPRPF*KQAGFC
Trigger: GCAAAACCCAGCTTGCTTCCAGAATGGCCTAGGACC...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CCA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCCCGTGTTGGCCAGGATaGTCTCTATCTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: STQGLGPHNQMKTHSGRAPCWPG*SLSLDL
Trigger: GAGGTCAAGAGATAGAGACCATCCTGGCCAACACGG...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAGCCCGGCTAAATGACTaGCCCAGTACCCTGACTTCC +
Preference number: 2 (lower is better)
Translates to: QSFNPKDPVATRVQKSESARLND*PSTLTS
Trigger: GGAAGTCAGGGTACTGGGCCAGTCATTTAGCCGGGC...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGGAACCTTCCTACTCCTaGCATTTTCCCTACCCTCAC +
Preference number: 2 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQEPSYS*HFPYPH
Trigger: GTGAGGGTAGGGAAAATGTCAGGAGTAGGAAGGTTC...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTCATTTGGCTGATTCATaGTATACTCTACCACATCTT +
Preference number: 2 (lower is better)
Translates to: SIPPTENSAMSAPAARASHLADS*YTLPHL
Trigger: AAGATGTGGTAGAGTATATCATGAATCAGCCAAATG...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp CTGTCCCCTGAGTCTGTCACCAGCAGCTATTTTCCTAAACTTCTTCAGATCCACTTGGAAGACAGAGCGTaGCTGTCTATGCCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: LSPESVTSSYFPKLLQIHLEDRA*LSMPVL
Trigger: CAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAA...GTGGATCTGAAGAAGTTTAGGAAAATAGCTGCTGGTGACAGACTCAGGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAGCTTCAGAACATCCCTaGAGTACACGGCATGAGACA +
Preference number: 2 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLASEHP*STRHET
Trigger: TGTCTCATGCCGTGTACTGCAGGGATGTTCTGAAGC...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGATGCACCTAATGCGTTaGAAGAGAAGGTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQMHLMR*KRRWGG
Trigger: CCCTCCCCACCTTCTCTTCCAACGCATTAGGTGCAT...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAAGACAGAACTGGTGTaGGCGCCAAAGGCAACCTGC +
Preference number: 2 (lower is better)
Translates to: QSFNPKDPVATRVQKSESKTELV*APKATC
Trigger: GCAGGTTGCCTTTGGCGCCCACACCAGTTCTGTCTT...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR TCA 90 bp CACCTGAGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGAACCTTCCTACTCCTaGCATTTTCCCTACCCTCAC +
Preference number: 2 (lower is better)
Translates to: HLSIILGLVLSALNGQFHEPSYS*HFPYPH
Trigger: GTGAGGGTAGGGAAAATGTCAGGAGTAGGAAGGTTC...GTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCCTACAAGATGCTTTCTaGGTTCTTTCAACTGTCCCT +
Preference number: 2 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSLQDAF*VLSTVP
Trigger: AGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAG...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp TGTGTTCATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATTTTCCCTACCCTCACTaGAACCCACCCCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: CVHQLCCGLMCRINYENHFPYPH*NPPPSW
Trigger: CCAGGATGGGGGTGGGTTGCAGTGAGGGTAGGGAAA...ATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATGAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp ACTGGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCCTCCAGGTCGGGGTaGAGATCTCTTAATTTTCCA +
Preference number: 2 (lower is better)
Translates to: TGTRFLDLLLVALTEEHPPSRSG*RSLNFP
Trigger: TGGAAAATTAAGAGATCTGCACCCCGACCTGGAGGG...TGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp TTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTaGCACTCCTGCCCAGCCGGC +
Preference number: 2 (lower is better)
Translates to: FNPKDPVATRVQKSESNAQNQKV*HSCPAG
Trigger: GCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTG...AGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR-3UTR CCA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACAGGGCACAAGGATGTTaGCGTAAACCTGGAGGTGTG +
Preference number: 2 (lower is better)
Translates to: IKELTILQWPNDPSIADHRAQGC*RKPGGV
Trigger: CACACCTCCAGGTTTACGCCAACATCCTTGTGCCCT...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR CAA 90 bp AGGTGCTATGGGGGCCAGCATTTGGAAAGCATATATCCCAGTGACTaGAGTATTTGCTATGCAACCTCCTGGACGAGAAACTGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: RCYGGQHLESIYPSD*SICYATSWTRNWEK
Trigger: CTTTTCCCAGTTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAGTCACTGGGATATATGCTTTCCAAATGCTGGCCCCCATAGCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 90 bp GGCCATTTTGGTGATGAAGTTCTTAGCAGCGTTGGAAGTCTGAGTTaGGAGAGCTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATA +
Preference number: 2 (lower is better)
Translates to: GHFGDEVLSSVGSLS*ESCPDCSGDLSVLI
Trigger: TATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTGCTAAGAACTTCATCACCAAAATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTAGGGGTGACAGAAACTaGAATGCAGCCTCCAATATT +
Preference number: 2 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEARGDRN*NAASNI
Trigger: AATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCT...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCGACGAGGGATATCTGTaGTCTCCTTTGAACAATAAA +
Preference number: 2 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSDEGYL*SPLNNK
Trigger: TTTATTGTTCAAAGGAGATCACAGATATCCCTCGTC...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGCCTGCATTGCTTTTTaGTATAAGCTGGCGGTGAAA +
Preference number: 2 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEAACIAF*YKLAVK
Trigger: TTTCACCGCCAGCTTATATCAAAAAGCAATGCAGGC...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp CAGTCCTCACCTTGTTATAGATATGTGTCAGAGTCTGGAAGGCATGATAATCATAAGGTGTGGCACTCCTaGCCAGCCGGCTTATCAGCA +
Preference number: 2 (lower is better)
Translates to: QSSPCYRYVSESGRHDNHKVWHS*PAGLSA
Trigger: TGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTT...ATGATTATCATGCCTTCCAGACTCTGACACATATCTATAACAAGGTGAGGACTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp TTTCTTAACATACATCATGCACGTAATCTTCGCTCTCCCAAGAGGCATTCACCCGATGCTGGGGCCTCATaGCCACTTAGGCCAATAACA +
Preference number: 2 (lower is better)
Translates to: FLNIHHARNLRSPKRHSPDAGAS*PLRPIT
Trigger: TGTTATTGGCCTAAGTGGGCATGAGGCCCCAGCATC...GGGTGAATGCCTCTTGGGAGAGCGAAGATTACGTGCATGATGTATGTTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR GCA 90 bp GATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACCGCTCTTGTGTTCATCAACTCTaGTGTGGTCTCATGTGCAGG +
Preference number: 2 (lower is better)
Translates to: DILYHILIMGQFTQVHRSCVHQL*CGLMCR
Trigger: CCTGCACATGAGACCACAGCAGAGTTGATGAACACA...AGAGCGGTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTAATCAATCCCCAAAATaGTATTCACTTCTACATACG +
Preference number: 2 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPNQSPK*YSLLHT
Trigger: CGTATGTAGAAGTGAATAGCATTTTGGGGATTGATT...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATGCTTCAGAACATCCCTaGAGTACACGGCATGAGACA +
Preference number: 2 (lower is better)
Translates to: EVEIVLIKELTILQWPNDASEHP*STRHET
Trigger: TGTCTCATGCCGTGTACTGCAGGGATGTTCTGAAGC...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp ACAGGAGTCTTGGTATTCTTCAGCACGGATAGCATCATTATGCGAAGAAATCTTCAGAATCAAAAGGTGTaGCACTCCTGCCCAGCCGGC +
Preference number: 2 (lower is better)
Translates to: TGVLVFFSTDSIIMRRNLQNQKV*HSCPAG
Trigger: GCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTG...AAGATTTCTTCGCATAATGATGCTATCCGTGCTGAAGAATACCAAGACTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CCA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATAAAGGATCAGCCACTTaGTCTTCCTCTGAGGTACAA +
Preference number: 2 (lower is better)
Translates to: TQERTFCLQILKLLTSGDKGSAT*SSSEVQ
Trigger: TTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTT...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACAAGGCTGGTGCACGTTaGAAGACAGAGCGTGCCTGT +
Preference number: 2 (lower is better)
Translates to: IHDILYHILIMGQFTQVHKAGAR*KTERAC
Trigger: ACAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTT...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CCA 90 bp CACCTGAGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACTCAGCTGCTATCTGCTaGAAGGCTTGGATTGTAGCT +
Preference number: 2 (lower is better)
Translates to: HLSIILGLVLSALNGQFHSAAIC*KAWIVA
Trigger: AGCTACAATCCAAGCCTTCCAGCAGATAGCAGCTGA...GTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CCA 90 bp GGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCTATTCGAGCAGCAGTCTaGAAACTGAGATCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: GTRFLDLLLVALTEEHPPIRAAV*KLRSCN
Trigger: GTTGCAAGATCTCAGTTTCCAGACTGCTGCTCGAAT...AGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 90 bp CTGATCAATGACAGCCTGAGGGAATGGGACCCTCTACTCAATTCATaGACTTCCTGCTTCTACTGCCTCCCAGAAGTGTCATTTCATTTC +
Preference number: 2 (lower is better)
Translates to: LINDSLREWDPLLNS*TSCFYCLPEVSFHF
Trigger: GAAATGAAATGACACTTCTGGGAGGCAGTAGAAGCAGGAAGTCAATGAATTGAGTAGAGGGTCCCATTCCCTCAGGCTGTCATTGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTGCAATGTCCCCTGGGTCTaGGAGAAAAATCCTACGCAA +
Preference number: 2 (lower is better)
Translates to: KQAKYVRKGWCTLEDRACNVPWV*EKNPTQ
Trigger: TTGCGTAGGATTTTTCTCTCAGACCCAGGGGACATT...GCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR TCA 90 bp GGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCTTTCGGTTCTAAGTTCTaGGCTCACAGCTGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: GTRFLDLLLVALTEEHPPFGSKF*AHSCFC
Trigger: ACAAAAACAGCTGTGAGCTCAGAACTTAGAACCGAA...AGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTAAATTCTTCACGTTTCTaGGGACCTTCTCGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALNSSRF*GPSRLG
Trigger: ACCAAGCCGAGAAGGTCCTCAGAAACGTGAAGAATT...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAATGGGGCTTCACGATaGAGCGACATGAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLNGASR*SDMKTE
Trigger: TTCTGTCTTCATGTCGCTGCATCGTGAAGCCCCATT...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR GCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGGGCACAGTATCCATCTaGACCCTCTCCTCGTATTTT +
Preference number: 2 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLGTVSI*TLSSYF
Trigger: AAAATACGAGGAGAGGGTGCAGATGGATACTGTGCC...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR GCA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCACCCTCCAGGTCGGGGTaGAGATCTCTTAATTTTCCA +
Preference number: 2 (lower is better)
Translates to: GHELYLLSTSRLLTHEIAPSRSG*RSLNFP
Trigger: TGGAAAATTAAGAGATCTGCACCCCGACCTGGAGGG...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCTGGAAACTGAGATCTTaGAACTGCCAAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSWKLRS*NCQTFK
Trigger: TTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCA...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGAAACTGTTTTTCAAATaGGGTGATTTCCTGTCCTTC +
Preference number: 2 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLKLFFK*GDFLSF
Trigger: GAAGGACAGGAAATCACCCCATTTGAAAAACAGTTT...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR-3UTR CCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACAAACCTGGAGGTGTGTaGACCTTGGACAGAGCTTCC +
Preference number: 2 (lower is better)
Translates to: IHDILYHILIMGQFTQVHKPGGV*TLDRAS
Trigger: GGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTT...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGCTGTGCCCTGCAGCCTaGCAGATGGAGTCGGATGCT +
Preference number: 2 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALLCPAA*QMESDA
Trigger: AGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAG...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR CCA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCTCGTGGAACAACATTTaGCTGATTCATGATATACTC +
Preference number: 2 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSSWNNI*LIHDIL
Trigger: GAGTATATCATGAATCAGCCAAATGTTGTTCCACGA...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTACCAGTTTCGGCTCTTTaGTCATCGGATTATTACACA +
Preference number: 2 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLPVSAL*SSDYYT
Trigger: TGTGTAATAATCCGATGACCAAAGAGCCGAAACTGG...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp TTTCTTAACATACATCATGCACGTAATCTTCGCTCTCCCAAGAGGCATTCACCCCACTTGGTCTTCCTCTaGGGTACAAATCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: FLNIHHARNLRSPKRHSPHLVFL*GTNPTE
Trigger: CTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTG...GGGTGAATGCCTCTTGGGAGAGCGAAGATTACGTGCATGATGTATGTTAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCATGCCATTCCACCCTCTaGCTAGAAGAATGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: QSFNPKDPVATRVQKSESCHSTL*LEECSL
Trigger: TAAAGAGCATTCTTCTAGTCAGAGGGTGGAATGGCA...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR TCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGCTGGTCTTGAACTCCTaGCCTCATGATCCGTCCGCC +
Preference number: 2 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALLVLNS*PHDPSA
Trigger: GGCGGACGGATCATGAGGTCAGGAGTTCAAGACCAG...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp AGCATCAGGGGGAGAATCAGTGCCATCGTGGCTGTAAATTCTATAAATATCTTCACAGCCACAGAACAGTaGGTACAACCAGAACTCCCA +
Preference number: 2 (lower is better)
Translates to: SIRGRISAIVAVNSINIFTATEQ*VQPELP
Trigger: TGGGAGTTCTGGTTGTACTCACTGTTCTGTGGCTGT...GAAGATATTTATAGAATTTACAGCCACGATGGCACTGATTCTCCCCCTGATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACATTCTGCTGGAGGGGTaGCAGAAACTGAAATGCAGC +
Preference number: 2 (lower is better)
Translates to: IHDILYHILIMGQFTQVHILLEG*QKLKCS
Trigger: GCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGAAT...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACGCCTGCATTGCTTTTTaGTATAAGCTGGCGGTGAAA +
Preference number: 2 (lower is better)
Translates to: IKELTILQWPNDPSIADHACIAF*YKLAVK
Trigger: TTTCACCGCCAGCTTATATCAAAAAGCAATGCAGGC...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATCAAAGGGCATTCCATTaGACAGCACAACGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYQRAFH*TAQRAE
Trigger: CTCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTG...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp TCTGCTGGAGGGGTGACAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTCTTTCCCATTACTTGTaGACACTGGGGTGTACAATC +
Preference number: 2 (lower is better)
Translates to: SAGGVTETEMQPPILHDSLSHYL*TLGCTI
Trigger: GATTGTACACCCCAGTGTTCACAAGTAATGGGAAAG...ACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430075.5
3UTR-3UTR GCA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACCTGAGATCTTGCAACTaGCAAACCTTTAAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: IKELTILQWPNDPSIADHLRSCN*QTFKGA
Trigger: GGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAG...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGGCCACGAATTATATCTaGTATCAACCTCCAGGTTGT +
Preference number: 2 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQATNYI*YQPPGC
Trigger: ACAACCTGGAGGTTGATAGCAGATATAATTCGTGGC...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp TTTCTTAACATACATCATGCACGTAATCTTCGCTCTCCCAAGAGGCATTCACCCATCCCAAAGATCCAGTaGCCACCAGAGTACAGAAGT +
Preference number: 2 (lower is better)
Translates to: FLNIHHARNLRSPKRHSPIPKIQ*PPEYRS
Trigger: ACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGAT...GGGTGAATGCCTCTTGGGAGAGCGAAGATTACGTGCATGATGTATGTTAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGCATGGTGGCTCTAGCTaGCCCTGCTTTCCGAGACAG +
Preference number: 2 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALHGGSS*PCFPRQ
Trigger: CTGTCTCGGAAAGCAGGGCCAGCTAGAGCCACCATG...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTCACTGCGGTTGGGTaGGGAATAAGTGTAATATTT +
Preference number: 2 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLFTAVG*GISVIF
Trigger: AAATATTACACTTATTCCCCACCCAACCGCAGTGAA...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR CCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGGCAGCAGTCTTGCCTTaGGAATCCAAGATAGTAAAT +
Preference number: 2 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQAAVLP*ESKIVN
Trigger: ATTTACTATCTTGGATTCCCAAGGCAAGACTGCTGC...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAATTTCACAGGAGTCTTaGTATTCTTCAGCACGGATA +
Preference number: 2 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLISQES*YSSARI
Trigger: TATCCGTGCTGAAGAATACCAAGACTCCTGTGAAAT...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR CAA 90 bp ACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTaGGAAGAGAAGGTGGGGAGGGCACAAGGATGTTGGCGTAAACCT +
Preference number: 2 (lower is better)
Translates to: TQLLVGFQLNNAPNA*EEKVGRAQGCWRKP
Trigger: AGGTTTACGCCAACATCCTTGTGCCCTCCCCACCTTCTCTTCCAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR TCA 90 bp AATAATCGGTACCGTCATGATCTGATGATCCAATATTTTGACTGGCTTCTACAACACCAGAGGGTAAACTaGGTCACGGTAGAGGCGGAA +
Preference number: 2 (lower is better)
Translates to: NNRYRHDLMIQYFDWLLQHQRVN*VTVEAE
Trigger: TTCCGCCTCTACCGTGACTCAGTTTACCCTCTGGTG...TTGTAGAAGCCAGTCAAAATATTGGATCATCAGATCATGACGGTACCGATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGATCTGTGATCTCCTTTaGACAATAAAGGTTTGGGTC +
Preference number: 2 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQICDLL*TIKVWV
Trigger: GACCCAAACCTTTATTGTTCAAAGGAGATCACAGAT...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp GTCTGGAAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATTGTCAGTTCCTTTCACCTaGGTATCATCCTTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: VWKLRSCNCQTFKGAISLSVPFT*VSSLAL
Trigger: CAAGGCCAAGGATGATACTCAGGTGAAAGGAACTGA...CAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp GTCTGGAAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATTGCCAAAGAGGAACCCCTaGACCTCATCAATAGGATCA +
Preference number: 2 (lower is better)
Translates to: VWKLRSCNCQTFKGAISLPKRNP*TSSIGS
Trigger: TGATCCTATTGATGAGGTTCAGGGGTTCCTCTTTGG...CAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGGATTTTATGCATTGTaGTGGTTTCTAACTCATCAG +
Preference number: 2 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEAGFYAL*WFLTHQ
Trigger: CTGATGAGTTAGAAACCATCACAATGCATAAAATCC...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp AGCATCAGGGGGAGAATCAGTGCCATCGTGGCTGTAAATTCTATAAATATCTTCTCATTTTCTTCCAGTTaGTGCTGCCATTCCACCCTC +
Preference number: 2 (lower is better)
Translates to: SIRGRISAIVAVNSINIFSFSSS*CCHSTL
Trigger: GAGGGTGGAATGGCAGCAGCAACTGGAAGAAAATGA...GAAGATATTTATAGAATTTACAGCCACGATGGCACTGATTCTCCCCCTGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp ACTGGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCAGTGCTCTCTACAAGATaGTTTCTGAGTTCTTTCAAC +
Preference number: 2 (lower is better)
Translates to: TGTRFLDLLLVALTEEHPVLSTR*FLSSFN
Trigger: GTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCAC...TGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 90 bp AATTCTGCTGGAGGGGTGACAGAAACTGAAATGCAGCCTCCAATATaGCATGATAGTAGGAATAATCGGTACCGTCATGATCTGATGATC +
Preference number: 2 (lower is better)
Translates to: NSAGGVTETEMQPPI*HDSRNNRYRHDLMI
Trigger: GATCATCAGATCATGACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
3UTR-3UTR TCA 90 bp ACAGGAGTCTTGGTATTCTTCAGCACGGATAGCATCATTATGCGAAGAAATCTTCACTTGGTCTTCCTCTaGGGTACAAATCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: TGVLVFFSTDSIIMRRNLHLVFL*GTNPTE
Trigger: CTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTG...AAGATTTCTTCGCATAATGATGCTATCCGTGCTGAAGAATACCAAGACTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCTGCCATTCCACCCTCTaGCTAGAAGAATGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTCHSTL*LEECSL
Trigger: TAAAGAGCATTCTTCTAGTCAGAGGGTGGAATGGCA...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR TCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGTATATCCCAGTGACTTaGGTATTTGCTATGCAACCT +
Preference number: 2 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLYIPVT*VFAMQP
Trigger: AGGTTGCATAGCAAATACTCAAGTCACTGGGATATA...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACGATATAAGCTGGCGGTaGAAATTGGAAAATTCCTCA +
Preference number: 2 (lower is better)
Translates to: IKELTILQWPNDPSIADHDISWR*KLENSS
Trigger: TGAGGAATTTTCCAATTTTCACCGCCAGCTTATATC...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp CCACGAATAACTGGTTGGTTGGAAAACATGGTACTTGATAATCTTTTGTTGTCAGCGCCAAAGGCAACCTaGAGGGCTCACATAAAAGGA +
Preference number: 2 (lower is better)
Translates to: PRITGWLENMVLDNLLLSAPKAT*RAHIKG
Trigger: TCCTTTTATGTGAGCCCTGCAGGTTGCCTTTGGCGC...TGACAACAAAAGATTATCAAGTACCATGTTTTCCAACCAACCAGTTATTCGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR GCA 90 bp TTTCTTAACATACATCATGCACGTAATCTTCGCTCTCCCAAGAGGCATTCACCCCTTGAGTATTTGCTATaGAACCTCCTGGACGAGAAA +
Preference number: 2 (lower is better)
Translates to: FLNIHHARNLRSPKRHSPLEYLL*NLLDEK
Trigger: TTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAG...GGGTGAATGCCTCTTGGGAGAGCGAAGATTACGTGCATGATGTATGTTAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR GCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACTCTATTCCCAATCTATaGAGACCCTCCATTACCCGA +
Preference number: 2 (lower is better)
Translates to: IHDILYHILIMGQFTQVHSIPNL*RPSITR
Trigger: TCGGGTAATGGAGGGTCTGCATAGATTGGGAATAGA...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACTTTCACCAATCACTGTaGTGTTTACCTCAGTTCCTT +
Preference number: 2 (lower is better)
Translates to: IKELTILQWPNDPSIADHFHQSL*CLPQFL
Trigger: AAGGAACTGAGGTAAACACCACAGTGATTGGTGAAA...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp ACTGGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACATCATAGATTTCCTTaGAGGACATTCCTTTCTTTG +
Preference number: 2 (lower is better)
Translates to: TGTRFLDLLLVALTEEHPHHRFP*RTFLSL
Trigger: CAAAGAAAGGAATGTCCTCCAAGGAAATCTATGATG...TGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp ACAGGAGTCTTGGTATTCTTCAGCACGGATAGCATCATTATGCGAAGAAATCTTCTGCCCAGATTGCTCTaGAGATCTGAGTGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: TGVLVFFSTDSIIMRRNLLPRLL*RSECSH
Trigger: ATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG...AAGATTTCTTCGCATAATGATGCTATCCGTGCTGAAGAATACCAAGACTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR CAA 90 bp AAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATaGGTGCTCTCTACAAGATGCTTTCTGAGTTCTTTCAACTGTCCC +
Preference number: 2 (lower is better)
Translates to: KLRSCNCQTFKGAIS*VLSTRCFLSSFNCP
Trigger: GGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCACCAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTAGTCTCCACTATGGCATaGTTGAGAGAGAAAATAATT +
Preference number: 2 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALVSTMA*LREKII
Trigger: AATTATTTTCTCTCTCAATCATGCCATAGTGGAGAC...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCATTTGGCTGATTCATaGTATACTCTACCACATCTT +
Preference number: 2 (lower is better)
Translates to: EVEIVLIKELTILQWPNDHLADS*YTLPHL
Trigger: AAGATGTGGTAGAGTATATCATGAATCAGCCAAATG...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp GAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGGGCCCAAAATTAATTTaGCCAGCCACTGCACCAAAC +
Preference number: 2 (lower is better)
Translates to: ESIPKMLFTSTYGYFFSRGPKLI*PATAPN
Trigger: GTTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCC...CCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCGCCACGAATTATATCTaGTATCAACCTCCAGGTTGT +
Preference number: 2 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTATNYI*YQPPGC
Trigger: ACAACCTGGAGGTTGATAGCAGATATAATTCGTGGC...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACGCCACTCCAGCATCTTaGATCCCATCAACATCTTCA +
Preference number: 2 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNATPAS*IPSTSS
Trigger: TGAAGATGTTGATGGGATGCAAGATGCTGGAGTGGC...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 90 bp ATAGATATGTGTCAGAGTCTGGAAGGCATGATAATCATCCACTTCTaGGGCAACATAATTATATGCTCTAAGAACAGCCACTCCAGCATC +
Preference number: 2 (lower is better)
Translates to: IDMCQSLEGMIIIHF*GNIIICSKNSHSSI
Trigger: GATGCTGGAGTGGCTGTTCTTAGAGCATATAATTATGTTGCCCAAGAAGTGGATGATTATCATGCCTTCCAGACTCTGACACATATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGGTCCCCACAATCAGATaGAAACTCATTCAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALVPTIR*KLIQAE
Trigger: CTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGAC...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR TCA 90 bp CAGTCCTCACCTTGTTATAGATATGTGTCAGAGTCTGGAAGGCATGATAATCATCTACAAGATGCTTTCTaGGTTCTTTCAACTGTCCCT +
Preference number: 2 (lower is better)
Translates to: QSSPCYRYVSESGRHDNHLQDAF*VLSTVP
Trigger: AGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAG...ATGATTATCATGCCTTCCAGACTCTGACACATATCTATAACAAGGTGAGGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTCGGTTCTAAGTTCTaGGCTCACAGCTGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYFGSKF*AHSCFC
Trigger: ACAAAAACAGCTGTGAGCTCAGAACTTAGAACCGAA...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp GAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGCTGAGATCTTGCAACTaGCAAACCTTTAAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: ESIPKMLFTSTYGYFFSRLRSCN*QTFKGA
Trigger: GGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAG...CCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGAAACTGTTTTTCAAATaGGGTGATTTCCTGTCCTTC +
Preference number: 2 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMKLFFK*GDFLSF
Trigger: GAAGGACAGGAAATCACCCCATTTGAAAAACAGTTT...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR-3UTR CCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTAAACTGTTTTTCAAATaGGGTGATTTCCTGTCCTTC +
Preference number: 2 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTKLFFK*GDFLSF
Trigger: GAAGGACAGGAAATCACCCCATTTGAAAAACAGTTT...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR-3UTR CCA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTAACCCACCCCCATCCTaGCCCAAAATTAATTTGCCC +
Preference number: 2 (lower is better)
Translates to: NLYPLGISGIYPEISITTNPPPS*PKINLP
Trigger: GGGCAAATTAATTTTGGGCCAGGATGGGGGTGGGTT...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACCATCAATATATTACCTaGCTTAGGAGGGTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNHQYIT*LRRVRA
Trigger: TGCCCTCACCCTCCTAAGCCAGGTAATATATTGATG...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACGCTGGCGGTGAAAATTaGAAAATTCCTCAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNAGGEN*KIPQSQ
Trigger: TTGGCTCTGAGGAATTTTCCAATTTTCACCGCCAGC...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTCAGCAGTCTGGAAACTaGGATCTTGCAACTGCCAAA +
Preference number: 2 (lower is better)
Translates to: PSTSSESLTTKIKPILSGQQSGN*DLATAK
Trigger: TTTGGCAGTTGCAAGATCTCAGTTTCCAGACTGCTG...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCTTGGTAGGAAAATTCTaGCTAAGATCCTTCATGACA +
Preference number: 2 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTLVGKF*LRSFMT
Trigger: TGTCATGAAGGATCTTAGTCAGAATTTTCCTACCAA...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp AGCATCAGGGGGAGAATCAGTGCCATCGTGGCTGTAAATTCTATAAATATCTTCGAAGTCAGAATCAAATaGTCAGAATCAAAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: SIRGRISAIVAVNSINIFEVRIK*SESKGV
Trigger: CACACCTTTTGATTCTGAGCATTTGATTCTGACTTC...GAAGATATTTATAGAATTTACAGCCACGATGGCACTGATTCTCCCCCTGATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACTGCAGCCTCCAATATTaGATGATAGTAGGAATAATC +
Preference number: 2 (lower is better)
Translates to: IHDILYHILIMGQFTQVHCSLQY*MIVGII
Trigger: GATTATTCCTACTATCATGCAATATTGGAGGCTGCA...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR GCA 90 bp AGCAGAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCTCTATTCCCAATCTATaGAGACCCTCCATTACCCGA +
Preference number: 2 (lower is better)
Translates to: SRINPQNAIHFYIRIFLLSIPNL*RPSITR
Trigger: TCGGGTAATGGAGGGTCTGCATAGATTGGGAATAGA...GAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACTGCTGTGGTCTCATGTaGAGGATCAACTATGAAAAC +
Preference number: 2 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNCCGLM*RINYEN
Trigger: GTTTTCATAGTTGATCCTGCACATGAGACCACAGCA...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 90 bp CTTTGTCAGATAGTTCATACTATTGGCTACAGCAGCAGTCTTGCCTaGGGAATCCAAGATAGTAAATCTAGCATAATCATCCACAAAGAA +
Preference number: 2 (lower is better)
Translates to: LCQIVHTIGYSSSLA*GIQDSKSSIIIHKE
Trigger: TTCTTTGTGGATGATTATGCTAGATTTACTATCTTGGATTCCCAAGGCAAGACTGCTGCTGTAGCCAATAGTATGAACTATCTGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp AGCAGAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCGTGCCATTTCATTGGTaGTCTCTACAAGATGCTTTC +
Preference number: 2 (lower is better)
Translates to: SRINPQNAIHFYIRIFLLVPFHW*SLQDAF
Trigger: GAAAGCATCTTGTAGAGAGCACCAATGAAATGGCAC...GAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp CATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATATTATGTGGAAACTGAGATCTTaGAACTGCCAAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: HQLCCGLMCRINYENHIMWKLRS*NCQTFK
Trigger: TTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCA...CATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp TGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTTCTGTCCTTGGTAGGAAAATTCTaGCTAAGATCCTTCATGACA +
Preference number: 2 (lower is better)
Translates to: CHIFFYPKLLNMRFYFLSLVGKF*LRSFMT
Trigger: TGTCATGAAGGATCTTAGTCAGAATTTTCCTACCAA...GGACAGAAAATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR GCA 90 bp CATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATATTATGAGCTTCAAAACATTATaGAGAGAAAGGCCTTCTATT +
Preference number: 2 (lower is better)
Translates to: HQLCCGLMCRINYENHIMSFKTL*RERPSI
Trigger: AATAGAAGGCCTTTCTCTGCATAATGTTTTGAAGCT...CATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGGATTATAAAAGAGGATaGCCAGTTCTGGTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALDYKRG*PVLVFL
Trigger: AAGGAAGACCAGAACTGGCCATCCTCTTTTATAATC...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR GCA 90 bp TGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTTCTGTCCAATCAATCCCCAAAATaGTATTCACTTCTACATACG +
Preference number: 2 (lower is better)
Translates to: CHIFFYPKLLNMRFYFLSNQSPK*YSLLHT
Trigger: CGTATGTAGAAGTGAATAGCATTTTGGGGATTGATT...GGACAGAAAATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR TCA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTACAGTTTCCAGAGTTTaGACATTCAGCACAATCAAT +
Preference number: 2 (lower is better)
Translates to: NLYPLGISGIYPEISITTTVSRV*TFSTIN
Trigger: ATTGATTGTGCTGAATGTTCAAACTCTGGAAACTGT...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR GCA 72 bp CAGAGCGTGCCTGTCTATGCCAGTGCTGCTGTGCCCTaGAGCCTGGCAGATGGAGTCGGATGCTGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: QSVPVYASAAVP*SLADGVGCWGL
Trigger: GAGGCCCCAGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGCACGCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 72 bp GAAGACAGAGCGTGCCTGTCTATGCCAGTGCTGCTGTaGCCTGCAGCCTGGCAGATGGAGTCGGATGCTGGG +
Preference number: 3 (lower is better)
Translates to: EDRACLSMPVLL*PAAWQMESDAG
Trigger: CCCAGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGCACGCTCTGTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CCA 72 bp AAGGATGTTGGCGTAAACCTGGAGGTGTGTGGACCTTaGACAGAGCTTCCGCCGGCCAGACCCAGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: KDVGVNLEVCGP*TELPPARPRAG
Trigger: CCCTGCCCTGGGTCTGGCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTTACGCCAACATCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CCA 72 bp AGGGCACAAGGATGTTGGCGTAAACCTGGAGGTGTGTaGACCTTGGACAGAGCTTCCGCCGGCCAGACCCAG +
Preference number: 3 (lower is better)
Translates to: RAQGCWRKPGGV*TLDRASAGQTQ
Trigger: CTGGGTCTGGCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTTACGCCAACATCCTTGTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 72 bp CATGGTGGCTCTAGCTGGCCCTGCTTTCCGAGACAGTaGAGCATGTGTGTGCTCTTGGGTGTGGGCACCAAA +
Preference number: 3 (lower is better)
Translates to: HGGSSWPCFPRQ*SMCVLLGVGTK
Trigger: TTTGGTGCCCACACCCAAGAGCACACACATGCTGCACTGTCTCGGAAAGCAGGGCCAGCTAGAGCCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 72 bp GTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTaGCTGTCTATGCCAGTGCTGCTGTGCCCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: VRKGWCTLEDRA*LSMPVLLCPAA
Trigger: GGCTGCAGGGCACAGCAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 72 bp GAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTaGAGCCCCCTCCTTGGCCATTTTGGTGATGAAGTT +
Preference number: 3 (lower is better)
Translates to: ELRNVSSCSQGL*SPLLGHFGDEV
Trigger: AACTTCATCACCAAAATGGCCAAGGAGGGGGCTGCAGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp AAAGGAAACTCTGGGAGTTCTTTCCTCCCTACCACCTaGGCCAGTCTCTTCCCCCTGTCCCTAGCTCTTGGC +
Preference number: 3 (lower is better)
Translates to: KGNSGSSFLPTT*ASLFPLSLALG
Trigger: GCCAAGAGCTAGGGACAGGGGGAAGAGACTGGCCCAGGTGGTAGGGAGGAAAGAACTCCCAGAGTTTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CAA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTGGAGGTGTGTGGACCTaGGACAGAGCTTCCGCCGGC +
Preference number: 3 (lower is better)
Translates to: MREGLSMAVFSKETGSRLGGVWT*DRASAG
Trigger: GCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCC...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR CAA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTGTTGGAAGTCTGAGTTaGGAGAGCTGCCCAGATTGC +
Preference number: 3 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPVGSLS*ESCPDC
Trigger: GCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAAC...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR GCA 72 bp GCAGCCTGGCAGATGGAGTCGGATGCTGGGGCCTCATaGCCACTTAGGCCAATAACATACTCAAGACTCTAC +
Preference number: 3 (lower is better)
Translates to: AAWQMESDAGAS*PLRPITYSRLY
Trigger: GTAGAGTCTTGAGTATGTTATTGGCCTAAGTGGGCATGAGGCCCCAGCATCCGACTCCATCTGCCAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR CAA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTCCCTCCTTGGCCATTTaGGTGATGAAGTTCTTAGCA +
Preference number: 3 (lower is better)
Translates to: SIPPTENSAMSAPAARASPSLAI*VMKFLA
Trigger: TGCTAAGAACTTCATCACCAAAATGGCCAAGGAGGG...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR GCA 72 bp ACAAAGCAGGGACTAAAGGCAAATGGGGCTTCACGATaGAGCGACATGAAGACAGAACTGGTGTGGGCGCCA +
Preference number: 3 (lower is better)
Translates to: TKQGLKANGASR*SDMKTELVWAP
Trigger: TGGCGCCCACACCAGTTCTGTCTTCATGTCGCTGCATCGTGAAGCCCCATTTGCCTTTAGTCCCTGCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 72 bp GTCGTAGTCCTGCCACTCCGGGACAATCCGCACAGCTaGTTCCAGTTTCGGCTCTTTGGTCATCGGATTATT +
Preference number: 3 (lower is better)
Translates to: VVVLPLRDNPHS*FQFRLFGHRII
Trigger: AATAATCCGATGACCAAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTCCCGGAGTGGCAGGACTACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR CCA 72 bp GCTTCACGATGCAGCGACATGAAGACAGAACTGGTGTaGGCGCCAAAGGCAACCTGCAGGGCTCACATAAAA +
Preference number: 3 (lower is better)
Translates to: ASRCSDMKTELV*APKATCRAHIK
Trigger: TTTTATGTGAGCCCTGCAGGTTGCCTTTGGCGCCCACACCAGTTCTGTCTTCATGTCGCTGCATCGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CCA 72 bp AGAGCGTCCCTTCCTAAGTCTGAGGATCCAAGCTCCTaGGTTGGCTTTCAGCTGAAAGTAGCCCAGATTGGC +
Preference number: 3 (lower is better)
Translates to: RASLPKSEDPSS*VGFQLKVAQIG
Trigger: GCCAATCTGGGCTACTTTCAGCTGAAAGCCAACCCAGGAGCTTGGATCCTCAGACTTAGGAAGGGACGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGAAAGGCTGGTGCACGTaGGAAGACAGAGCGTGCCTG +
Preference number: 3 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQKGWCT*EDRACL
Trigger: CAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTTT...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR TCA 72 bp CAGGGTCTAGCTGTTCCCTTTCAAAGGGCATTCCATTaGACAGCACAACGGGCAGAGGTCCAACTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: QGLAVPFQRAFH*TAQRAEVQLQS
Trigger: AGACTGGAGTTGGACCTCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTGAAAGGGAACAGCTAGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR GCA 72 bp CTGAGCCAAAACCAAGAGCAAAGGAGCAAGTCTCTGTaGTTCTCTGGTGACAGGGTCAACGACAGCCACAAC +
Preference number: 3 (lower is better)
Translates to: LSQNQEQRSKSL*FSGDRVNDSHN
Trigger: GTTGTGGCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTGGTTTTGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CAA 90 bp AAGTTTTTCCTGATCTGCCGAATAACACCAGGAAAGGTGGGTCGAAGCAACTCTAATGCGGTGCTCGTCTaGAGGGAGCCTGACCCTGAC +
Preference number: 3 (lower is better)
Translates to: KFFLICRITPGKVGRSNSNAVLV*REPDPD
Trigger: GTCAGGGTCAGGCTCCCTCAAGACGAGCACCGCATT...AGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp CAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATCCGCATTCAGGCAGAGCCTaGACAAGGTTCAGAACACGA +
Preference number: 3 (lower is better)
Translates to: QERTFCLQILKLLTSGDPHSGRA*TRFRTR
Trigger: TCGTGTTCTGAACCTTGTCAAGGCTCTGCCTGAATG...CGGATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CAA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGTTTATAGCAAACTCCTaGCCAAGAAGACCACTGAGG +
Preference number: 3 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKFIANS*PRRPLR
Trigger: CCTCAGTGGTCTTCTTGGCAAGGAGTTTGCTATAAA...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTTTGAACAATAAAGGTTaGGGTCTTTCAGAGGCTGTC +
Preference number: 3 (lower is better)
Translates to: SIPPTENSAMSAPAARASLNNKG*GLSEAV
Trigger: GACAGCCTCTGAAAGACCCAAACCTTTATTGTTCAA...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CAA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAAATGCACCTAATGCGTaGGAAGAGAAGGTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLENAPNA*EEKVGR
Trigger: CCTCCCCACCTTCTCTTCCAACGCATTAGGTGCATT...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR GCA 72 bp TCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATaGTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: SSGHQSTEVRIK*SESKGVALLPS
Trigger: GCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR GCA 72 bp CCCCCATCCTGGCCCAAAATTAATTTGCCCAGCCACTaGACCAAACCAGCCTTGACACACAATTGTTGGTTG +
Preference number: 3 (lower is better)
Translates to: PPSWPKINLPSH*TKPALTHNCWL
Trigger: CAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCCAGGATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 72 bp GCTGGGTATCTGGGAAAGACTCAGGAGAGGACCTTTTaGTTGCAAATCCTCAAACTCCTGACCTCGGGTGAT +
Preference number: 3 (lower is better)
Translates to: AGYLGKTQERTF*LQILKLLTSGD
Trigger: ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGTCTTTCCCAGATACCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CAA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCGTATCATCCTTGGCCTaGTACTCAGTGCTCTTAATG +
Preference number: 3 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSVSSLA*YSVLLM
Trigger: CATTAAGAGCACTGAGTACAAGGCCAAGGATGATAC...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp AGTCTGCACATCAATATATTACCTGGCTTAGGAGGGTaGGGGCACAGTATCCATCTGCACCCTCTCCTCGTA +
Preference number: 3 (lower is better)
Translates to: SLHINILPGLGG*GHSIHLHPLLV
Trigger: TACGAGGAGAGGGTGCAGATGGATACTGTGCCCTCACCCTCCTAAGCCAGGTAATATATTGATGTGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR TCA 72 bp GTGCCATTTCATTGGTGCTCTCTACAAGATGCTTTCTaGGTTCTTTCAACTGTCCCTCCAGGTCGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: VPFHWCSLQDAF*VLSTVPPGRGA
Trigger: TGCACCCCGACCTGGAGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCACCAATGAAATGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp CCAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTaGCAGGGTCAACGACAGCCACAACATCAAAGTATG +
Preference number: 3 (lower is better)
Translates to: PRAKEQVSVLLW*QGQRQPQHQSM
Trigger: CATACTTTGATGTTGTGGCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp TTGAGTATTTGCTATGCAACCTCCTGGACGAGAAACTaGGAAAAGGCACACTTCCGCCCACAGTTGTGGACA +
Preference number: 3 (lower is better)
Translates to: LSICYATSWTRN*EKAHFRPQLWT
Trigger: TGTCCACAACTGTGGGCGGAAGTGTGCCTTTTCCCAGTTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CAA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCACAAGTACACCGCTCTTaGGAAGAAGGTGGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: QSFNPKDPVATRVQKSESQVHRS*EEGGGL
Trigger: GAGACCACCACCTTCTTCCAAAGAGCGGTGTACTTG...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp ACTGGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCAGCTACAGCAGCAGTCTaGCCTTGGGAATCCAAGATA +
Preference number: 3 (lower is better)
Translates to: TGTRFLDLLLVALTEEHPATAAV*PWESKI
Trigger: TATCTTGGATTCCCAAGGCAAGACTGCTGCTGTAGC...TGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp CTATGGGGGCCAGCATTTGGAAAGCATATATCCCAGTaGCTTGAGTATTTGCTATGCAACCTCCTGGACGAG +
Preference number: 3 (lower is better)
Translates to: LWGPAFGKHISQ*LEYLLCNLLDE
Trigger: CTCGTCCAGGAGGTTGCATAGCAAATACTCAAGTCACTGGGATATATGCTTTCCAAATGCTGGCCCCCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR TCA 72 bp CTGGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTaGCAGAAGAGCATCCACCTTCATTACCAAGTCGCT +
Preference number: 3 (lower is better)
Translates to: LVLDSWISFWLR*QKSIHLHYQVA
Trigger: AGCGACTTGGTAATGAAGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp TTTCTTTCTCCTTCTGAAAGCGGATCTGTAGCTGTTTaGTCTCTTGGTCGTAGTCCTGCCACTCCGGGACAA +
Preference number: 3 (lower is better)
Translates to: FLSPSESGSVAV*SLGRSPATPGQ
Trigger: TTGTCCCGGAGTGGCAGGACTACGACCAAGAGATCAAACAGCTACAGATCCGCTTTCAGAAGGAGAAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR GCA 72 bp AGCGTTGGAAGTCTGAGTTTGGAGAGCTGCCCAGATTaGTCTGGAGATCTGAGTGTTCTCATAGCTTATCTC +
Preference number: 3 (lower is better)
Translates to: SVGSLSLESCPD*SGDLSVLIAYL
Trigger: GAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp AAAAACTGGCAGGAGGAGGAGGGTCCTAGGCCATTCTaGAAGCAAGCTGGGTTTTGCATTATTCAGAGTCAA +
Preference number: 3 (lower is better)
Translates to: KNWQEEEGPRPF*KQAGFCIIQSQ
Trigger: TTGACTCTGAATAATGCAAAACCCAGCTTGCTTCCAGAATGGCCTAGGACCCTCCTCCTCCTGCCAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CAA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTACTCATTTTCTTCCAGTaGCTGCTGCCATTCCACCCT +
Preference number: 3 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALLIFFQ*LLPFHP
Trigger: AGGGTGGAATGGCAGCAGCAACTGGAAGAAAATGAG...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR CAA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATAAAGGCTGGTGCACGTaGGAAGACAGAGCGTGCCTG +
Preference number: 3 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYKGWCT*EDRACL
Trigger: CAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTTT...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACTGCACCAAACCAGCCTaGACACACAATTGTTGGTTG +
Preference number: 3 (lower is better)
Translates to: IKELTILQWPNDPSIADHCTKPA*THNCWL
Trigger: CAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGCA...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCATGGCCCAAAATTAATTaGCCCAGCCACTGCACCAAA +
Preference number: 3 (lower is better)
Translates to: QSFNPKDPVATRVQKSESWPKIN*PSHCTK
Trigger: TTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCCA...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR-3UTR CAA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGTATGGGGGCCAGCATTaGGAAAGCATATATCCCAGT +
Preference number: 3 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLYGGQH*ESIYPS
Trigger: ACTGGGATATATGCTTTCCAAATGCTGGCCCCCATA...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CAA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACTCAACCTCCAGGTTGTaGACCCATGAAATAGCAGGA +
Preference number: 3 (lower is better)
Translates to: IKELTILQWPNDPSIADHSTSRL*THEIAG
Trigger: TCCTGCTATTTCATGGGTCAACAACCTGGAGGTTGA...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp GGGGCCAGCATTTGGAAAGCATATATCCCAGTGACTTaGGTATTTGCTATGCAACCTCCTGGACGAGAAACT +
Preference number: 3 (lower is better)
Translates to: GASIWKAYIPVT*VFAMQPPGRET
Trigger: AGTTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAGTCACTGGGATATATGCTTTCCAAATGCTGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR TCA 72 bp ATTTTGGTGATGAAGTTCTTAGCAGCGTTGGAAGTCTaGGTTTGGAGAGCTGCCCAGATTGCTCTGGAGATC +
Preference number: 3 (lower is better)
Translates to: ILVMKFLAALEV*VWRAAQIALEI
Trigger: GATCTCCAGAGCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTGCTAAGAACTTCATCACCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp TGGAAGTCTGAGTTTGGAGAGCTGCCCAGATTGCTCTaGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGG +
Preference number: 3 (lower is better)
Translates to: WKSEFGELPRLL*RSECSHSLSLW
Trigger: CCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCCAAACTCAGACTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CAA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCATATATCCCAGTGACTaGAGTATTTGCTATGCAACC +
Preference number: 3 (lower is better)
Translates to: STQGLGPHNQMKTHSGRAIYPSD*SICYAT
Trigger: GGTTGCATAGCAAATACTCAAGTCACTGGGATATAT...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR GCA 72 bp ACATTATGCAGAGAAAGGCCTTCTATTCCCAATCTATaGAGACCCTCCATTACCCGAGCTTCATTCCTCAAC +
Preference number: 3 (lower is better)
Translates to: TLCRERPSIPNL*RPSITRASFLN
Trigger: GTTGAGGAATGAAGCTCGGGTAATGGAGGGTCTGCATAGATTGGGAATAGAAGGCCTTTCTCTGCATAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR GCA 72 bp GCTCTTTGGAAGAAGGTGGTGGTCTCCAGGATTTTATaGATTGTGATGGTTTCTAACTCATCAGGGTCTAGC +
Preference number: 3 (lower is better)
Translates to: ALWKKVVVSRIL*IVMVSNSSGSS
Trigger: GCTAGACCCTGATGAGTTAGAAACCATCACAATGCATAAAATCCTGGAGACCACCACCTTCTTCCAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CAA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACCAAGTACACCGCTCTTaGGAAGAAGGTGGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNQVHRS*EEGGGL
Trigger: GAGACCACCACCTTCTTCCAAAGAGCGGTGTACTTG...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp TCATTTTCTTCCAGTTGCTGCTGCCATTCCACCCTCTaGCTAGAAGAATGCTCTTTACAGAGTCCAAAGGAT +
Preference number: 3 (lower is better)
Translates to: SFSSSCCCHSTL*LEECSLQSPKD
Trigger: ATCCTTTGGACTCTGTAAAGAGCATTCTTCTAGTCAGAGGGTGGAATGGCAGCAGCAACTGGAAGAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 72 bp TTTAAAGGTGCCATTTCATTGGTGCTCTCTACAAGATaGTTTCTGAGTTCTTTCAACTGTCCCTCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: FKGAISLVLSTR*FLSSFNCPSRS
Trigger: CGACCTGGAGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCACCAATGAAATGGCACCTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp AACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTaGAAACTGAGATCTTGCAACTGCCAAACCTTTAAA +
Preference number: 3 (lower is better)
Translates to: NSTGEAKIRAAV*KLRSCNCQTFK
Trigger: TTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp CCAGCTCTCAGGTGTGTTCAAATTCAGAGTGAACAGTaGAGACTGAGGCATATCCAAAAATTTTGCGATTGG +
Preference number: 3 (lower is better)
Translates to: PALRCVQIQSEQ*RLRHIQKFCDW
Trigger: CCAATCGCAAAATTTTTGGATATGCCTCAGTCTCCACTGTTCACTCTGAATTTGAACACACCTGAGAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR CCA 72 bp GGACAATCCGCACAGCTGCTTCCAGTTTCGGCTCTTTaGTCATCGGATTATTACACAAATCAATGGTTTTTG +
Preference number: 3 (lower is better)
Translates to: GQSAQLLPVSAL*SSDYYTNQWFL
Trigger: CAAAAACCATTGATTTGTGTAATAATCCGATGACCAAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp ATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGCCGGCTTATCAGCAGTaGTATAGACAGATCAGAAAA +
Preference number: 3 (lower is better)
Translates to: IQWPPEYRSQNQMLRIKRPAYQQ*YRQIRK
Trigger: TTTTCTGATCTGTCTATACAACTGCTGATAAGCCGG...CCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR-3UTR CAA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCCGGCTTATCAGCAGTaGTATAGACAGATCAGAAAA +
Preference number: 3 (lower is better)
Translates to: HQSTEVRIKCSESKGVALPAYQQ*YRQIRK
Trigger: TTTTCTGATCTGTCTATACAACTGCTGATAAGCCGG...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR-3UTR CAA 90 bp TGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTTCTGTCCTCAAAGGGCATTCCATaGAACAGCACAACGGGCAGA +
Preference number: 3 (lower is better)
Translates to: CHIFFYPKLLNMRFYFLSSKGIP*NSTTGR
Trigger: TCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTGA...GGACAGAAAATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp ACCACAGGGCTTTCAGGATTAGACGAGGGATATCTGTaGTCTCCTTTGAACAATAAAGGTTTGGGTCTTTCA +
Preference number: 3 (lower is better)
Translates to: TTGLSGLDEGYL*SPLNNKGLGLS
Trigger: TGAAAGACCCAAACCTTTATTGTTCAAAGGAGATCACAGATATCCCTCGTCTAATCCTGAAAGCCCTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp TACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTaGCCACCAGAGTACAGAAGTCAGAATCAAATGCTC +
Preference number: 3 (lower is better)
Translates to: YKSNRALIPKIQ*PPEYRSQNQML
Trigger: GAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
3UTR CCA 72 bp TATAAATTGTCACTGATCAATGACAGCCTGAGGGAATaGGACCCTCTACTCAATTCATTGACTTCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: YKLSLINDSLRE*DPLLNSLTSCF
Trigger: GAAGCAGGAAGTCAATGAATTGAGTAGAGGGTCCCATTCCCTCAGGCTGTCATTGATCAGTGACAATTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CCA 72 bp AGGACATTCCTTTCTTTGTCAGATAGTTCATACTATTaGCTACAGCAGCAGTCTTGCCTTGGGAATCCAAGA +
Preference number: 3 (lower is better)
Translates to: RTFLSLSDSSYY*LQQQSCLGNPR
Trigger: TCTTGGATTCCCAAGGCAAGACTGCTGCTGTAGCCAATAGTATGAACTATCTGACAAAGAAAGGAATGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp TTCACACCAAAGCCATTCTTGAGGGAGGGATTTAATTaGCACCTGATGAATCATGTTATTGGGCAGATCTTG +
Preference number: 3 (lower is better)
Translates to: FTPKPFLREGFN*HLMNHVIGQIL
Trigger: CAAGATCTGCCCAATAACATGATTCATCAGGTGCCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATAGCCTTGACACACAATaGTTGGTTGGATTTCAATTA +
Preference number: 3 (lower is better)
Translates to: EVEIVLIKELTILQWPNDSLDTQ*LVGFQL
Trigger: TAATTGAAATCCAACCAACAATTGTGTGTCAAGGCT...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACTTGAACAATAAAGGTTaGGGTCTTTCAGAGGCTGTC +
Preference number: 3 (lower is better)
Translates to: IHDILYHILIMGQFTQVHLNNKG*GLSEAV
Trigger: GACAGCCTCTGAAAGACCCAAACCTTTATTGTTCAA...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CAA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGCCCTTAGCAAAACTATaGTCTGAAGTGAAAGAAATC +
Preference number: 3 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLPLAKL*SEVKEI
Trigger: GATTTCTTTCACTTCAGACAATAGTTTTGCTAAGGG...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR TCA 72 bp TCACTTCTACATACGGATATTTCTTCTCCAGGACACTaGCCACATGTTCAACTTTCACTTTTTCTCCAGTCC +
Preference number: 3 (lower is better)
Translates to: SLLHTDISSPGH*PHVQLSLFLQS
Trigger: GGACTGGAGAAAAAGTGAAAGTTGAACATGTGGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp TTCTTCAGCTTCAGAACATCCCTGCAGTACACGGCATaGGACAAAATGAAATCCATTTTGGAAGACTCAAAG +
Preference number: 3 (lower is better)
Translates to: FFSFRTSLQYTA*DKMKSILEDSK
Trigger: CTTTGAGTCTTCCAAAATGGATTTCATTTTGTCTCATGCCGTGTACTGCAGGGATGTTCTGAAGCTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp TTTAAGATGATATTTTCGAGGAGGTGGAAATCGTCTTaGTTAAAGAGCTCACTATCCTCCAGTGGCCCAATG +
Preference number: 3 (lower is better)
Translates to: FKMIFSRRWKSS*LKSSLSSSGPM
Trigger: CATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTCCTCGAAAATATCATCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp TCAGGTGTGTTCAAATTCAGAGTGAACAGTGGAGACTaGGGCATATCCAAAAATTTTGCGATTGGACCCTTA +
Preference number: 3 (lower is better)
Translates to: SGVFKFRVNSGD*GISKNFAIGPL
Trigger: TAAGGGTCCAATCGCAAAATTTTTGGATATGCCTCAGTCTCCACTGTTCACTCTGAATTTGAACACACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR GCA 72 bp ATTACTAAGGAACATCTCAGCTGTGTTCATCAACTCTaGTGTGGTCTCATGTGCAGGATCAACTATGAAAAC +
Preference number: 3 (lower is better)
Translates to: ITKEHLSCVHQL*CGLMCRINYEN
Trigger: GTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATGAACACAGCTGAGATGTTCCTTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CAA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGACACCAAAGCCATTCTaGAGGGAGGGATTTAATTGG +
Preference number: 3 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALTPKPF*REGFNW
Trigger: CCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTGT...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR GCA 72 bp TTTGGTCATCGGATTATTACACAAATCAATGGTTTTTaGCCTTTTCTTAGAGGCGTCATCACACCACGTTTC +
Preference number: 3 (lower is better)
Translates to: FGHRIITQINGF*PFLRGVITPRF
Trigger: GAAACGTGGTGTGATGACGCCTCTAAGAAAAGGGCAAAAACCATTGATTTGTGTAATAATCCGATGACCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
3UTR-3UTR CAA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTGTATCATCCTTGGCCTaGTACTCAGTGCTCTTAATG +
Preference number: 3 (lower is better)
Translates to: PSTSSESLTTKIKPILSGVSSLA*YSVLLM
Trigger: CATTAAGAGCACTGAGTACAAGGCCAAGGATGATAC...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR TCA 72 bp AAATTAATTTGCCCAGCCACTGCACCAAACCAGCCTTaGCACACAATTGTTGGTTGGATTTCAATTAAACAA +
Preference number: 3 (lower is better)
Translates to: KLICPATAPNQP*HTIVGWISIKQ
Trigger: TTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGCAGTGGCTGGGCAAATTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR GCA 72 bp TCCGATTCCGATCATAAGCAGAATCAATCCCCAAAATaGTATTCACTTCTACATACGGATATTTCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: SDSDHKQNQSPK*YSLLHTDISSP
Trigger: TGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTCTGCTTATGATCGGAATCGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CCA 72 bp GTCTCGTTCAGCTGTCAAAATCCTAGAATTGATTCGTaGAACAACATTTGGCTGATTCATGATATACTCTAC +
Preference number: 3 (lower is better)
Translates to: VSFSCQNPRIDS*NNIWLIHDILY
Trigger: GTAGAGTATATCATGAATCAGCCAAATGTTGTTCCACGAATCAATTCTAGGATTTTGACAGCTGAACGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR-3UTR CAA 90 bp CCACGAATAACTGGTTGGTTGGAAAACATGGTACTTGATAATCTTTTGTTGTCATTAAACATAAGAGGCTaGGTAGAAAGACATGGGGAA +
Preference number: 3 (lower is better)
Translates to: PRITGWLENMVLDNLLLSLNIRG*VERHGE
Trigger: TTCCCCATGTCTTTCTACCAAGCCTCTTATGTTTAA...TGACAACAAAAGATTATCAAGTACCATGTTTTCCAACCAACCAGTTATTCGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR TCA 72 bp GCTGGGTTTTGCATTATTCAGAGTCAACTATTAAGCTaGCTTATATTAGAATGGCGACAGATAAGAGGCAAT +
Preference number: 3 (lower is better)
Translates to: AGFCIIQSQLLS*LILEWRQIRGN
Trigger: ATTGCCTCTTATCTGTCGCCATTCTAATATAAGTCAGCTTAATAGTTGACTCTGAATAATGCAAAACCCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR-3UTR CAA 90 bp CCACGAATAACTGGTTGGTTGGAAAACATGGTACTTGATAATCTTTTGTTGTCAAGCCTTGACACACAATaGTTGGTTGGATTTCAATTA +
Preference number: 3 (lower is better)
Translates to: PRITGWLENMVLDNLLLSSLDTQ*LVGFQL
Trigger: TAATTGAAATCCAACCAACAATTGTGTGTCAAGGCT...TGACAACAAAAGATTATCAAGTACCATGTTTTCCAACCAACCAGTTATTCGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR TCA 72 bp GGCAAGCATCTATGTGTTCAATTCGAAATGCAACAATaGCAGATGTACAACTTTACCACTCTTAAAGAAACT +
Preference number: 3 (lower is better)
Translates to: GKHLCVQFEMQQ*QMYNFTTLKET
Trigger: AGTTTCTTTAAGAGTGGTAAAGTTGTACATCTGTCATTGTTGCATTTCGAATTGAACACATAGATGCTTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CCA 72 bp TGTCAAAATCCTAGAATTGATTCGTGGAACAACATTTaGCTGATTCATGATATACTCTACCACATCTTGATC +
Preference number: 3 (lower is better)
Translates to: CQNPRIDSWNNI*LIHDILYHILI
Trigger: GATCAAGATGTGGTAGAGTATATCATGAATCAGCCAAATGTTGTTCCACGAATCAATTCTAGGATTTTGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGCGCTCGCGTCTCCCTTaGAGCCCATGCCCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKRSRLP*SPCPGR
Trigger: ACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCG...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCGCTCGCGTCTCCCTTaGAGCCCATGCCCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPRSRLP*SPCPGR
Trigger: ACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCG...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 72 bp CAAGGATGTTGGCGTAAACCTGGAGGTGTGTGGACCTaGGACAGAGCTTCCGCCGGCCAGACCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QGCWRKPGGVWT*DRASAGQTQGR
Trigger: CCTGCCCTGGGTCTGGCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTTACGCCAACATCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGCTCCCTTGCAGCCCATaGCCGGGCCGTGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQLPCSP*PGRGQS
Trigger: GGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAG...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCAGCGGCAGTGCAGGCTaGGCCAGTGAGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSSGSAG*ASERPT
Trigger: TGTCGGCCTCTCACTGGCGCAGCCTGCACTGCCGCT...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTGGCAGGGTGGGCATCTaGAGTGCAGCGCAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPAGRVGI*SAAQAA
Trigger: TGCGGCCTGCGCTGCACTGCAGATGCCCACCCTGCC...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCCCCATGCCCGGGCCGTaGTCAGTCCGCCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: RIKCSESKGVALLPSRLIPMPGP*SVRHSA
Trigger: GGCACTGTGGCGGACTGACCACGGCCCGGGCATGGG...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGCAGCGTTGGAAGTCTaGGTTTGGAGAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKAALEV*VWRAAQ
Trigger: CTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTGC...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGACGCTCGCGTCTCCCTTaGAGCCCATGCCCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRRSRLP*SPCPGR
Trigger: ACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCG...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATGGCGGAAGCTCAATGTaGCAGGGGCACAGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYGGSSM*QGHRVA
Trigger: GGCGACCCTGTGCCCCTGTCACATTGAGCTTCCGCC...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACCCCATGCCCGGGCCGTaGTCAGTCCGCCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYPMPGP*SVRHSA
Trigger: GGCACTGTGGCGGACTGACCACGGCCCGGGCATGGG...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATACCCATGCCCGGGCCGTaGTCAGTCCGCCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: SIILGLVLSALNGQFHAIPMPGP*SVRHSA
Trigger: GGCACTGTGGCGGACTGACCACGGCCCGGGCATGGG...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTGAGGTGTGTGGACCTTaGACAGAGCTTCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPAEVCGP*TELPPA
Trigger: GGCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTC...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTCTGACCCTGACGGGCTaGATGCGAGAGGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPALTLTG*MREGLS
Trigger: ACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CAA 72 bp GCCGAGGTGGGCAGATCACCACCTGAGGTCAGGAGTTaGAGATCAGCCTGGCCAACCAACATGGTAAAACCC +
Preference number: 4 (lower is better)
Translates to: AEVGRSPPEVRS*RSAWPTNMVKP
Trigger: GGGTTTTACCATGTTGGTTGGCCAGGCTGATCTCAAACTCCTGACCTCAGGTGGTGATCTGCCCACCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGTGCAGGCTGCGCCAGTaGGAGGCCGACACGCGCCTT +
Preference number: 4 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLCRLRQ*EADTRL
Trigger: AAGGCGCGTGTCGGCCTCTCACTGGCGCAGCCTGCA...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTCCTTCGGCCTCAGTTTaGTTGCACTGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SIPPTENSAMSAPAARASPSASV*LHCVCL
Trigger: AAGACAGACACAGTGCAATCAAACTGAGGCCGAAGG...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATATGCGGTGCTCGTCTTaGGGGAGCCTGACCCTGACC +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYMRCSS*GSLTLT
Trigger: GGTCAGGGTCAGGCTCCCTCAAGACGAGCACCGCAT...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCTCCCTTGCAGCCCATaGCCGGGCCGTGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: EVEIVLIKELTILQWPNDLPCSP*PGRGQS
Trigger: GGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAG...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACCTCCCTTGCAGCCCATaGCCGGGCCGTGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: IKELTILQWPNDPSIADHLPCSP*PGRGQS
Trigger: GGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAG...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTTGCTTTCCGAGACAGTaGAGCATGTGTGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SIPPTENSAMSAPAARASCFPRQ*SMCVLL
Trigger: CAAGAGCACACACATGCTGCACTGTCTCGGAAAGCA...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGGGCTCTAGCTGGCCCTaGTTTCCGAGACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQGSSWP*FPRQCS
Trigger: GCTGCACTGTCTCGGAAAGCAGGGCCAGCTAGAGCC...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTAAAGAGGGCAGACAATaGGGTGCTCGTCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPKEGRQ*GARLEG
Trigger: TCCCTCAAGACGAGCACCGCATTGTCTGCCCTCTTT...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAGTGCTGCTGTGCCCTaGAGCCTGGCAGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLSAAVP*SLADGV
Trigger: GACTCCATCTGCCAGGCTGCAGGGCACAGCAGCACT...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGGCCCGGCTAAATGACTaGCCCAGTACCCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLARLND*PSTLTS
Trigger: GGAAGTCAGGGTACTGGGCCAGTCATTTAGCCGGGC...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAATGCAGGCTGCGCCAGTaGGAGGCCGACACGCGCCTT +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQCRLRQ*EADTRL
Trigger: AAGGCGCGTGTCGGCCTCTCACTGGCGCAGCCTGCA...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTTCAGTTCCTTTCACCTaGGTATCATCCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SIPPTENSAMSAPAARASSVPFT*VSSLAL
Trigger: CAAGGCCAAGGATGATACTCAGGTGAAAGGAACTGA...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTTTTCGCCCGGCTAAATaGCTGGCCCAGTACCCTGAC +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVFRPAK*LAQYPD
Trigger: GTCAGGGTACTGGGCCAGTCATTTAGCCGGGCGAAA...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAACTTGGTACTGTCCCCTaGGTCTGTCACCAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSELGTVP*VCHQQL
Trigger: TAGCTGCTGGTGACAGACTCAGGGGACAGTACCAAG...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAACCTTCCTACTCCTaGCATTTTCCCTACCCTCAC +
Preference number: 4 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKEPSYS*HFPYPH
Trigger: GTGAGGGTAGGGAAAATGTCAGGAGTAGGAAGGTTC...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGAATGCGGTGCTCGTCTTaGGGGAGCCTGACCCTGACC +
Preference number: 4 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRMRCSS*GSLTLT
Trigger: GGTCAGGGTCAGGCTCCCTCAAGACGAGCACCGCAT...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGAAAGGTCCTTCAGGATaGCTGGGAGGCTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLKGPSG*LGGFLG
Trigger: GCCTAGGAAGCCTCCCAGTCATCCTGAAGGACCTTT...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAAGCGGCAGTGCAGGCTaGGCCAGTGAGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPSGSAG*ASERPT
Trigger: TGTCGGCCTCTCACTGGCGCAGCCTGCACTGCCGCT...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCCCTCCAGGTCGGGGTaGAGATCTCTTAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPPSRSG*RSLNFP
Trigger: TGGAAAATTAAGAGATCTGCACCCCGACCTGGAGGG...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATATGCAGCCAGGGCCTCTaGAGCCCCCTCCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SIILGLVLSALNGQFHAICSQGL*SPLLGH
Trigger: ATGGCCAAGGAGGGGGCTGCAGAGGCCCTGGCTGCA...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTAAGGTGTGGCACTCCTaGCCAGCCGGCTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVKVWHS*PAGLSA
Trigger: TGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTT...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCGGCTCTAGCTGGCCCTaGTTTCCGAGACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RIKCSESKGVALLPSRLIGSSWP*FPRQCS
Trigger: GCTGCACTGTCTCGGAAAGCAGGGCCAGCTAGAGCC...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATGCAGATGGAGTCGGATaGTGGGGCCTCATGCCCACT +
Preference number: 4 (lower is better)
Translates to: TQERTFCLQILKLLTSGDADGVG*WGLMPT
Trigger: AGTGGGCATGAGGCCCCAGCATCCGACTCCATCTGC...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATATGCCAGTGCTGCTGTaGCCTGCAGCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYMPVLL*PAAWQM
Trigger: CATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCAT...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTCCCATCTTTCCAGCTaGTCTGAACAGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLSHLSS*SEQRGR
Trigger: CCTGCCCCTCTGTTCAGAGCAGCTGGAAAGATGGGA...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp CAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATCCGTCCACAGCTAGCCTCTaGACTGCTGGGTATCTGGGA +
Preference number: 4 (lower is better)
Translates to: QERTFCLQILKLLTSGDPSTASL*TAGYLG
Trigger: TCCCAGATACCCAGCAGTGCAGAGGCTAGCTGTGGA...CGGATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGAAGGCTGGTGCACGTTaGAAGACAGAGCGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQKAGAR*KTERAC
Trigger: ACAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTT...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CAA 72 bp ACGAGAAACTGGGAAAAGGCACACTTCCGCCCACAGTaGTGGACAGCAGCAGTCACCCGTCTGAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: TRNWEKAHFRPQ*WTAAVTRLNAF
Trigger: GAAAGCATTCAGACGGGTGACTGCTGCTGTCCACAACTGTGGGCGGAAGTGTGCCTTTTCCCAGTTTCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GTCTGGAAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATTGTGCAGGCTGCGCCAGTaGGAGGCCGACACGCGCCTT +
Preference number: 4 (lower is better)
Translates to: VWKLRSCNCQTFKGAISLCRLRQ*EADTRL
Trigger: AAGGCGCGTGTCGGCCTCTCACTGGCGCAGCCTGCA...CAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAACAAAGGGCATTCCATTaGACAGCACAACGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSEQRAFH*TAQRAE
Trigger: CTCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTG...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGGATCTGTAGCTGTTTaGTCTCTTGGTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKGSVAV*SLGRSP
Trigger: AGGACTACGACCAAGAGATCAAACAGCTACAGATCC...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCTCTTTCCAGCTGCTCTaGACAGAGGGGCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGSFQLL*TEGQGG
Trigger: CCCGCCCTGCCCCTCTGTTCAGAGCAGCTGGAAAGA...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGGCTGTGACAGGCTTTaGTCTCAATCAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKGCDRL*SQSNAT
Trigger: AGTGGCATTTGATTGAGATCAAAGCCTGTCACAGCC...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCCGCTCGCGTCTCCCTTaGAGCCCATGCCCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: KLKCSLQYCMIVGIIGTVRSRLP*SPCPGR
Trigger: ACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCG...GACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR GCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGGTCTACGGCATAGTCTaGCTCAGAGGGCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLVYGIV*LRGLDV
Trigger: AACATCCAGCCCTCTGAGGCAGACTATGCCGTAGAC...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGTGTGTTCATCAACTCTaGTGTGGTCTCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKCVHQL*CGLMCR
Trigger: CCTGCACATGAGACCACAGCAGAGTTGATGAACACA...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCTGCAGCCAGGGCCTCTaGAGCCCCCTCCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: HQSTEVRIKCSESKGVALCSQGL*SPLLGH
Trigger: ATGGCCAAGGAGGGGGCTGCAGAGGCCCTGGCTGCA...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTAAGGTGTGGCACTCCTaGCCAGCCGGCTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEAKVWHS*PAGLSA
Trigger: TGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTT...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCTTTCCCTACCCTCACTaGAACCCACCCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: STQGLGPHNQMKTHSGRAFPYPH*NPPPSW
Trigger: CCAGGATGGGGGTGGGTTGCAGTGAGGGTAGGGAAA...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGAAGTGCTGCTGTGCCCTaGAGCCTGGCAGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRSAAVP*SLADGV
Trigger: GACTCCATCTGCCAGGCTGCAGGGCACAGCAGCACT...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGCAGCCATTCTGAGGTaGCTTTTCAGTCTCTTATCC +
Preference number: 4 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKAAILR*LFSLLS
Trigger: GGATAAGAGACTGAAAAGGCACCTCAGAATGGCTGC...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATGCTCACTGCAACCTCTaGCTCCTGGGTTCAGGCGAT +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYAHCNL*LLGSGD
Trigger: ATCGCCTGAACCCAGGAGGCAGAGGTTGCAGTGAGC...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCCCATGCCCGGGCCGTaGTCAGTCCGCCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRPMPGP*SVRHSA
Trigger: GGCACTGTGGCGGACTGACCACGGCCCGGGCATGGG...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR CCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATGCCCGGCTAAATGACTaGCCCAGTACCCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYARLND*PSTLTS
Trigger: GGAAGTCAGGGTACTGGGCCAGTCATTTAGCCGGGC...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAAAGGGCACAAGGATGTTaGCGTAAACCTGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSERAQGC*RKPGGV
Trigger: CACACCTCCAGGTTTACGCCAACATCCTTGTGCCCT...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCCTGACCCTGACGGGCTaGATGCGAGAGGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGLTLTG*MREGLS
Trigger: ACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAAGGGACTAAAGGCAAATaGGGCTTCACGATGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSEGTKGK*GFTMQR
Trigger: TCGCTGCATCGTGAAGCCCCATTTGCCTTTAGTCCC...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTACTGCAGCCTGGCAGATaGAGTCGGATGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALLQPGR*SRMLGP
Trigger: AGGCCCCAGCATCCGACTCCATCTGCCAGGCTGCAG...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTTCCGCCCACAGTTGTaGACAGCAGCAGTCACCCGT +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYFRPQL*TAAVTR
Trigger: ACGGGTGACTGCTGCTGTCCACAACTGTGGGCGGAA...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 72 bp GGGTATCTGGGAAAGACTCAGGAGAGGACCTTTTGCTaGCAAATCCTCAAACTCCTGACCTCGGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: GYLGKTQERTFC*QILKLLTSGDP
Trigger: CGGATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGTCTTTCCCAGATACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp CAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCTGCAGGCTGCGCCAGTaGGAGGCCGACACGCGCCTT +
Preference number: 4 (lower is better)
Translates to: QKLKCSLQYCMIVGIIGTCRLRQ*EADTRL
Trigger: AAGGCGCGTGTCGGCCTCTCACTGGCGCAGCCTGCA...GGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR TCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTTTCGGTTCTAAGTTCTaGGCTCACAGCTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SIPPTENSAMSAPAARASFGSKF*AHSCFC
Trigger: ACAAAAACAGCTGTGAGCTCAGAACTTAGAACCGAA...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAACCTTCGGCCTCAGTTTaGTTGCACTGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSEPSASV*LHCVCL
Trigger: AAGACAGACACAGTGCAATCAAACTGAGGCCGAAGG...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCTCTGTGCTTCTCTGGTaGCAGGGTCAACGACAGCCA +
Preference number: 4 (lower is better)
Translates to: STQGLGPHNQMKTHSGRASVLLW*QGQRQP
Trigger: TGGCTGTCGTTGACCCTGTCACCAGAGAAGCACAGA...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTCAATGGTGTCCACAATaGCCGGGTTGGCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVQWCPQ*PGWLKF
Trigger: GAACTTCAGCCAACCCGGTCATTGTGGACACCATTG...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTCAATGGTGTCCACAATaGCCGGGTTGGCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLQWCPQ*PGWLKF
Trigger: GAACTTCAGCCAACCCGGTCATTGTGGACACCATTG...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCTGAGGGCATTTGTAGAGAAAAGTCCAAGGCAATGTCCCCTGGGTCTGAGAGACTTGGTACTGTCCCCTaGGTCTGTCACCAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SEGICREKSKAMSPGSERLGTVP*VCHQQL
Trigger: TAGCTGCTGGTGACAGACTCAGGGGACAGTACCAAG...TCTCTCAGACCCAGGGGACATTGCCTTGGACTTTTCTCTACAAATGCCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCACGATGCAGCGACATaGAGACAGAACTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYHDAAT*RQNWCG
Trigger: CCCACACCAGTTCTGTCTTCATGTCGCTGCATCGTG...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAAAAGGTCCTTCAGGATaGCTGGGAGGCTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSKGPSG*LGGFLG
Trigger: GCCTAGGAAGCCTCCCAGTCATCCTGAAGGACCTTT...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTCTGGTCTTGAACTCCTaGCCTCATGATCCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: MREGLSMAVFSKETGSRLLVLNS*PHDPSA
Trigger: GGCGGACGGATCATGAGGTCAGGAGTTCAAGACCAG...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCATCTCAGGGTGATGTCTaGCTGTCCAAGTCACGGGGT +
Preference number: 4 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSSQGDV*LSKSRG
Trigger: ACCCCGTGACTTGGACAGTCAGACATCACCCTGAGA...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTGTCAGTCCGCCACAGTaGCAGAGACAACGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTVSPPQ*QRQRQG
Trigger: GCCCTGGCGTTGTCTCTGGCACTGTGGCGGACTGAC...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGAAAGAGGGCAGACAATaGGGTGCTCGTCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: EVRIKCSESKGVALLPSRKEGRQ*GARLEG
Trigger: TCCCTCAAGACGAGCACCGCATTGTCTGCCCTCTTT...CCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGCGCCAAAGGCAACCTaGAGGGCTCACATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVAPKAT*RAHIKG
Trigger: TCCTTTTATGTGAGCCCTGCAGGTTGCCTTTGGCGC...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGGATGCTGGGGCCTCATaGCCACTTAGGCCAATAACA +
Preference number: 4 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQDAGAS*PLRPIT
Trigger: TGTTATTGGCCTAAGTGGGCATGAGGCCCCAGCATC...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGTGTCTATGCCAGTGCTaGTGTGCCCTGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLCLCQC*CALQPG
Trigger: GCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACA...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACGCCTGTCTATGCCAGTaGTGCTGTGCCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYACLCQ*CCALQP
Trigger: AGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGC...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAATTGCCAGGCTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSIARLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCAGCCTGGCAAT...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTGCAGCAGTCTTGCCTTaGGAATCCAAGATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: SIPPTENSAMSAPAARASAAVLP*ESKIVN
Trigger: ATTTACTATCTTGGATTCCCAAGGCAAGACTGCTGC...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTGAGGTGTGTGGACCTTaGACAGAGCTTCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTEVCGP*TELPPA
Trigger: GGCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTC...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCTGCAGCCTGGCAGATaGAGTCGGATGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTLQPGR*SRMLGP
Trigger: AGGCCCCAGCATCCGACTCCATCTGCCAGGCTGCAG...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTCAGTTCCTTTCACCTaGGTATCATCCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQSVPFT*VSSLAL
Trigger: CAAGGCCAAGGATGATACTCAGGTGAAAGGAACTGA...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGCAGCAGTCTGGAAACTaGGATCTTGCAACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLQQSGN*DLATAK
Trigger: TTTGGCAGTTGCAAGATCTCAGTTTCCAGACTGCTG...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCTACTCTACCACATCTTaGTCATGGGGCAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSYSTTS*SWGSSP
Trigger: GGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTA...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAACTGGCCCAGTACCCTaGCTTCCAGAACCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPTGPVP*LPEPVA
Trigger: GGCTACAGGTTCTGGAAGTCAGGGTACTGGGCCAGT...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTGCACTGGCCCAGTACCCTaGCTTCCAGAACCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: KQAKYVRKGWCTLEDRACTGPVP*LPEPVA
Trigger: GGCTACAGGTTCTGGAAGTCAGGGTACTGGGCCAGT...GCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATTTTCGCCCGGCTAAATaGCTGGCCCAGTACCCTGAC +
Preference number: 4 (lower is better)
Translates to: EVEIVLIKELTILQWPNDFRPAK*LAQYPD
Trigger: GTCAGGGTACTGGGCCAGTCATTTAGCCGGGCGAAA...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAGGATGCGAGAGGGGCTaGGTATGGCTGTATTCAGTA +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLGCERG*VWLYSV
Trigger: TACTGAATACAGCCATACTCAGCCCCTCTCGCATCC...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGGATGCGAGAGGGGCTaGGTATGGCTGTATTCAGTA +
Preference number: 4 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEAGCERG*VWLYSV
Trigger: TACTGAATACAGCCATACTCAGCCCCTCTCGCATCC...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCCCTGGCTTAGGAGGGTaGGGGCACAGTATCCATCTG +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGPGLGG*GHSIHL
Trigger: CAGATGGATACTGTGCCCTCACCCTCCTAAGCCAGG...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTAGCGGCAGTGCAGGCTaGGCCAGTGAGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRSGSAG*ASERPT
Trigger: TGTCGGCCTCTCACTGGCGCAGCCTGCACTGCCGCT...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR GCA 90 bp ACAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCTCCCTTGCAGCCCATaGCCGGGCCGTGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: TETEMQPPILHDSRNNRYLPCSP*PGRGQS
Trigger: GGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAG...GTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR GCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCTGGAGGTTCATCAGCTaGTATCTGCTGGAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSWRFIS*YLLEGL
Trigger: CAAGCCTTCCAGCAGATAGCAGCTGATGAACCTCCA...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTGCAGCCAGGGCCTCTaGAGCCCCCTCCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYCSQGL*SPLLGH
Trigger: ATGGCCAAGGAGGGGGCTGCAGAGGCCCTGGCTGCA...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTGCTTCAGAACATCCCTaGAGTACACGGCATGAGACA +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLASEHP*STRHET
Trigger: TGTCTCATGCCGTGTACTGCAGGGATGTTCTGAAGC...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATAGGAGCAAGTCTCTGTaGTTCTCTGGTGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: TQERTFCLQILKLLTSGDRSKSL*FSGDRV
Trigger: GACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCT...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGAAGGAGCAAGTCTCTGTaGTTCTCTGGTGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: RIKRCGTPAQPAYQQLYRRSKSL*FSGDRV
Trigger: GACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCT...TCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGACAATCCGCACAGCTaGTTCCAGTTTCGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVDNPHS*FQFRLF
Trigger: AAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTC...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAAGGTGTGGCACTCCTaGCCAGCCGGCTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: QSFNPKDPVATRVQKSESKVWHS*PAGLSA
Trigger: TGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTT...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTTGCTTTCCGAGACAGTaGAGCATGTGTGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVCFPRQ*SMCVLL
Trigger: CAAGAGCACACACATGCTGCACTGTCTCGGAAAGCA...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGAATGGGGCTTCACGATaGAGCGACATGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLNGASR*SDMKTE
Trigger: TTCTGTCTTCATGTCGCTGCATCGTGAAGCCCCATT...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCAGGTGTAAGCCACTGTaGCTGACCGGAAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSRCKPL*LTGNCF
Trigger: GAAACAGTTTCCGGTCAGGCACAGTGGCTTACACCT...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCAAGCAGGCAGCCACTTaGCACAGACTTTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSKQAAT*HRLCSL
Trigger: CAAACTGCAAAGTCTGTGGCAAGTGGCTGCCTGCTT...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAACCACGCCCGGCGCTTaGAAATACCGACCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPTTPGA*KYRPQS
Trigger: ACTCTGTGGTCGGTATTTGCAAGCGCCGGGCGTGGT...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GGTTTGGGTCTTTCAGAGGCTGTCAGTAGAAGAGCCTCAAGGGTATCAGATTCACACAGGGTCGCCTTGTaGCCCAAACCCTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GLGLSEAVSRRASRVSDSHRVAL*PKPSLC
Trigger: ACAAAGAGAGGGTTTGGGGCACAAGGCGACCCTGTG...TGAATCTGATACCCTTGAGGCTCTTCTACTGACAGCCTCTGAAAGACCCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTGCCATGGTGGCTCTAGCTaGCCCTGCTTTCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: KQAKYVRKGWCTLEDRACHGGSS*PCFPRQ
Trigger: CTGTCTCGGAAAGCAGGGCCAGCTAGAGCCACCATG...GCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGCTGTGCCCTGCAGCCTaGCAGATGGAGTCGGATGCT +
Preference number: 4 (lower is better)
Translates to: IQWPPEYRSQNQMLRIKRLCPAA*QMESDA
Trigger: AGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAG...CCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCATGGGGAAAGGTGCTATaGGGGCCAGCATTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSWGKVL*GPAFGK
Trigger: CTTTCCAAATGCTGGCCCCCATAGCACCTTTCCCCA...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGCTTGGTAGAAAGACATaGGGAAAGGTGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQLGRKT*GKVLWG
Trigger: CCCCCATAGCACCTTTCCCCATGTCTTTCTACCAAG...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTAATAATCCCAGCACTTTaGGGGGCCGATGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALIIPAL*GADAGG
Trigger: TCCACCCGCATCGGCCCCCCAAAGTGCTGGGATTAT...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 72 bp CCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCTaGACAAGGTTCAGAACACGAGGGCTTGACCGGACA +
Preference number: 4 (lower is better)
Translates to: PHNQMKTHSGRA*TRFRTRGLDRT
Trigger: TGTCCGGTCAAGCCCTCGTGTTCTGAACCTTGTCAAGGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 72 bp GACAGCCTGAGGGAATGGGACCCTCTACTCAATTCATaGACTTCCTGCTTCTACTGCCTCCCAGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: DSLREWDPLLNS*TSCFYCLPEVS
Trigger: TGACACTTCTGGGAGGCAGTAGAAGCAGGAAGTCAATGAATTGAGTAGAGGGTCCCATTCCCTCAGGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAATCCTTTTGGTTGCGCTaGCAGAAGAGCATCCACCTT +
Preference number: 4 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLESFWLR*QKSIHL
Trigger: AAGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGA...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCACCAAAGCCATTCTTaGGGGAGGGATTTAATTGGC +
Preference number: 4 (lower is better)
Translates to: EVRIKCSESKGVALLPSRHQSHS*GRDLIG
Trigger: GCCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTG...CCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR TCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAAGTTTCTTTCTCCTTCTaGAAGCGGATCTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSEVSFSF*KRICSC
Trigger: ACAGCTACAGATCCGCTTTCAGAAGGAGAAAGAAAC...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR TCA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGAATTCTTCACGTTTCTaGGGACCTTCTCGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQNSSRF*GPSRLG
Trigger: ACCAAGCCGAGAAGGTCCTCAGAAACGTGAAGAATT...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR TCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAAGGCCGCAGGTAAACTaGGGTAAGGAAGAACATGGT +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLRPQVN*GKEEHG
Trigger: ACCATGTTCTTCCTTACCTCAGTTTACCTGCGGCCT...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCTGAGGGCATTTGTAGAGAAAAGTCCAAGGCAATGTCCCCTGGGTCTGAGAGAAGGCCGCAGGTAAACTaGGGTAAGGAAGAACATGGT +
Preference number: 4 (lower is better)
Translates to: SEGICREKSKAMSPGSERRPQVN*GKEEHG
Trigger: ACCATGTTCTTCCTTACCTCAGTTTACCTGCGGCCT...TCTCTCAGACCCAGGGGACATTGCCTTGGACTTTTCTCTACAAATGCCCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCAGCAAAGTATGCCCTaGGGGGCAACACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLQQSMP*GATLAV
Trigger: CACAGCCAGTGTTGCCCCTCAGGGCATACTTTGCTG...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAGGCAGAGGTTGAAGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: QSFNPKDPVATRVQKSESRQRLK*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTTCAACCTCTGCCT...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTAGGGCAGATCACCACCTaGGGTCAGGAGTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALGQITT*GQEFEI
Trigger: GATCTCAAACTCCTGACCTCAGGTGGTGATCTGCCC...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTGTCCCCACAATCAGATaGAAACTCATTCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLVPTIR*KLIQAE
Trigger: CTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGAC...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGGTCAGGAGAATCTCTTaGACCCGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMVRRIS*TREAEA
Trigger: AGCCTCTGCCTCCCGGGTTCAAGAGATTCTCCTGAC...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp TCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTCTTGGAAACTGAGATCTTaGAACTGCCAAACCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SIPPTENSAMSAPAARASWKLRS*NCQTFK
Trigger: TTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCA...AGAGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCGCCACTCCAGCATCTTaGATCCCATCAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSATPAS*IPSTSS
Trigger: TGAAGATGTTGATGGGATGCAAGATGCTGGAGTGGC...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGAGAGCTGCCCAGATTaGTCTGGAGATCTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSESCPD*SGDLSV
Trigger: AACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTC...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGGGATCTCCTTTTGGTTaGGCTGACAGAAGAGCATCC +
Preference number: 4 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQGSPFG*ADRRAS
Trigger: GGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCC...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAGGATCTCCTTTTGGTTaGGCTGACAGAAGAGCATCC +
Preference number: 4 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLEGSPFG*ADRRAS
Trigger: GGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCC...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGGGCAGGGTGGGCATCTaGAGTGCAGCGCAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALGRVGI*SAAQAA
Trigger: TGCGGCCTGCGCTGCACTGCAGATGCCCACCCTGCC...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAATGGGGCTTCACGATaGAGCGACATGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLNGASR*SDMKTE
Trigger: TTCTGTCTTCATGTCGCTGCATCGTGAAGCCCCATT...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCATGCCAGTGCTGCTGTaGCCTGCAGCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTMPVLL*PAAWQM
Trigger: CATCTGCCAGGCTGCAGGGCACAGCAGCACTGGCAT...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp TTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTGAGCGTGCCTGTCTATaGCAGTGCTGCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: FNPKDPVATRVQKSESNAERACL*QCCCAL
Trigger: CAGGGCACAGCAGCACTGGCATAGACAGGCACGCTC...AGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACGAGCGTGCCTGTCTATaGCAGTGCTGCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: IHDILYHILIMGQFTQVHERACL*QCCCAL
Trigger: CAGGGCACAGCAGCACTGGCATAGACAGGCACGCTC...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp ATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGCCAGGAGGCAGAGGTTaGAGTGAGCCAAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: IQWPPEYRSQNQMLRIKRPGGRG*SEPRSH
Trigger: GTGTGACCTTGGCTCACTGCAACCTCTGCCTCCTGG...CCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGTCAGCTGCTATCTGCTaGAAGGCTTGGATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQSAAIC*KAWIVA
Trigger: AGCTACAATCCAAGCCTTCCAGCAGATAGCAGCTGA...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGCCTGAGTATCATCCTTaGCCTTGTACTCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQPEYHP*PCTQCS
Trigger: AGAGCACTGAGTACAAGGCCAAGGATGATACTCAGG...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGTCTGCCTCAGAGGGCTaGATGTTCAGCTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: EVRIKCSESKGVALLPSRSASEG*MFSFKT
Trigger: TGTTTTGAAGCTGAACATCCAGCCCTCTGAGGCAGA...CCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATAAGTACACCGCTCTTTaGAAGAAGGTGGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TQERTFCLQILKLLTSGDKYTAL*KKVVVS
Trigger: GGAGACCACCACCTTCTTCCAAAGAGCGGTGTACTT...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTCTGCCCAGATTGCTCTaGAGATCTGAGTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLLPRLL*RSECSH
Trigger: ATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCCAAGCTCCTGGGTTaGCTTTCAGCTGAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLSKLLG*LSAESS
Trigger: GCTACTTTCAGCTGAAAGCCAACCCAGGAGCTTGGA...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCAGAATCAAAAGGTGTaGCACTCCTGCCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMQNQKV*HSCPAG
Trigger: GCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTG...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCCAGAATCAAAAGGTGTaGCACTCCTGCCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSQNQKV*HSCPAG
Trigger: GCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTG...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCAACCCACCCCCATCCTaGCCCAAAATTAATTTGCCC +
Preference number: 4 (lower is better)
Translates to: STQGLGPHNQMKTHSGRANPPPS*PKINLP
Trigger: GGGCAAATTAATTTTGGGCCAGGATGGGGGTGGGTT...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp TTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCTGTGCCCTGCAGCCTaGCAGATGGAGTCGGATGCT +
Preference number: 4 (lower is better)
Translates to: FNPKDPVATRVQKSESNALCPAA*QMESDA
Trigger: AGCATCCGACTCCATCTGCCAGGCTGCAGGGCACAG...AGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGAAAATTAACCAGGCATaGTGGCAGGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: EVRIKCSESKGVALLPSRKINQA*WQAPVI
Trigger: GATTACAGGCGCCTGCCACCATGCCTGGTTAATTTT...CCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp TTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTTTTGGGAGGCCGAGGTaGGCAGATCACCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: FNPKDPVATRVQKSESNAFGRPR*ADHHLR
Trigger: CCTCAGGTGGTGATCTGCCCACCTCGGCCTCCCAAA...AGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTGTAGAGCAGGTTTCCTaGCTAAAGGAAACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPAVEQVS*LKETLG
Trigger: TCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTAC...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCGACAGCCTGAGGGAATaGGACCCTCTACTCAATTCA +
Preference number: 4 (lower is better)
Translates to: STQGLGPHNQMKTHSGRADSLRE*DPLLNS
Trigger: TGAATTGAGTAGAGGGTCCCATTCCCTCAGGCTGTC...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 72 bp GGTGATGAAGTTCTTAGCAGCGTTGGAAGTCTGAGTTaGGAGAGCTGCCCAGATTGCTCTGGAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GDEVLSSVGSLS*ESCPDCSGDLS
Trigger: ACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTGCTAAGAACTTCATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGAATTCTGCTGGAGGGGTaGCAGAAACTGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRILLEG*QKLKCS
Trigger: GCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGAAT...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTGGCTTGGATTGTAGCTaGGTAAGAACGAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: MREGLSMAVFSKETGSRLGLDCS*VRTKGQ
Trigger: CTGTCCCTTCGTTCTTACTCAGCTACAATCCAAGCC...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTACCAAAGAGGAACCCCTaGACCTCATCAATAGGATCA +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLPKRNP*TSSIGS
Trigger: TGATCCTATTGATGAGGTTCAGGGGTTCCTCTTTGG...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACGCAGCGTTGGAAGTCTaGGTTTGGAGAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: IHDILYHILIMGQFTQVHAALEV*VWRAAQ
Trigger: CTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTGC...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp ACTGGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCATCCTTTTGGTTGCGCTaGCAGAAGAGCATCCACCTT +
Preference number: 4 (lower is better)
Translates to: TGTRFLDLLLVALTEEHPSFWLR*QKSIHL
Trigger: AAGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGA...TGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTACGGGGCCATTTGTACTaGACAAGCTCATACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLRGHLY*TSSYWK
Trigger: TTTCCAGTATGAGCTTGTTCAGTACAAATGGCCCCG...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCTGAGGGCATTTGTAGAGAAAAGTCCAAGGCAATGTCCCCTGGGTCTGAGAGACACCAAAGCCATTCTTaGGGGAGGGATTTAATTGGC +
Preference number: 4 (lower is better)
Translates to: SEGICREKSKAMSPGSERHQSHS*GRDLIG
Trigger: GCCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTG...TCTCTCAGACCCAGGGGACATTGCCTTGGACTTTTCTCTACAAATGCCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCACCAAAGCCATTCTTaGGGGAGGGATTTAATTGGC +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYHQSHS*GRDLIG
Trigger: GCCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTG...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR TCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAGGATCTGTAGCTGTTTaGTCTCTTGGTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLGSVAV*SLGRSP
Trigger: AGGACTACGACCAAGAGATCAAACAGCTACAGATCC...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR TCA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAATTCTTCACGTTTCTaGGGACCTTCTCGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RIKCSESKGVALLPSRLINSSRF*GPSRLG
Trigger: ACCAAGCCGAGAAGGTCCTCAGAAACGTGAAGAATT...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR TCA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCCACTTGGTCTTCCTCTaGGGTACAAATCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: RIKCSESKGVALLPSRLIHLVFL*GTNPTE
Trigger: CTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTG...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCCAGCAAAGTATGCCCTaGGGGGCAACACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTQQSMP*GATLAV
Trigger: CACAGCCAGTGTTGCCCCTCAGGGCATACTTTGCTG...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTCTCTACTCAATTCATTaGCTTCCTGCTTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLLYSIH*LPASTA
Trigger: GGCAGTAGAAGCAGGAAGTCAATGAATTGAGTAGAG...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCACACCAGAGGGTAAACTaGGTCACGGTAGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: GHELYLLSTSRLLTHEIAHQRVN*VTVEAE
Trigger: TTCCGCCTCTACCGTGACTCAGTTTACCCTCTGGTG...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp AATCGGTACCGTCATGATCTGATGATCCAATATTTTGACTGGCTTCTACAAAATAGCGGCAGTGCAGGCTaGGCCAGTGAGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: NRYRHDLMIQYFDWLLQNSGSAG*ASERPT
Trigger: TGTCGGCCTCTCACTGGCGCAGCCTGCACTGCCGCT...ATTTTGTAGAAGCCAGTCAAAATATTGGATCATCAGATCATGACGGTACCGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR GCA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTGCTGTGGTCTCATGTaGAGGATCAACTATGAAAAC +
Preference number: 4 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQCCGLM*RINYEN
Trigger: GTTTTCATAGTTGATCCTGCACATGAGACCACAGCA...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATGCATCATACAGTAACTaGCGTCCAGAAGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYASYSN*RPEGLS
Trigger: TGATAGCCCTTCTGGACGGCAGTTACTGTATGATGC...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGAGCTTCAGAACATCCCTaGAGTACACGGCATGAGACA +
Preference number: 4 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRASEHP*STRHET
Trigger: TGTCTCATGCCGTGTACTGCAGGGATGTTCTGAAGC...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAACTTCTCTTTGTACAGTaGTCCCGTTTCTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSELLFVQ*SRFFLL
Trigger: AAGGAGAAAGAAACGGGAGCACTGTACAAAGAGAAG...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCATTTTCTTCCAGTTaGTGCTGCCATTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLSFSSS*CCHSTL
Trigger: GAGGGTGGAATGGCAGCAGCAACTGGAAGAAAATGA...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGAGTGCAGCATGTGTGTaGTCTTGGGTGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMSAACV*SWVWAP
Trigger: TGGTGCCCACACCCAAGAGCACACACATGCTGCACT...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGAGTGCAGCATGTGTGTaGTCTTGGGTGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLSAACV*SWVWAP
Trigger: TGGTGCCCACACCCAAGAGCACACACATGCTGCACT...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATGGCCCAAAATTAATTTaGCCAGCCACTGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: TQERTFCLQILKLLTSGDGPKLI*PATAPN
Trigger: GTTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCC...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCGATGCTGGGGCCTCATaGCCACTTAGGCCAATAACA +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGDAGAS*PLRPIT
Trigger: TGTTATTGGCCTAAGTGGGCATGAGGCCCCAGCATC...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTGTCTATGCCAGTGCTaGTGTGCCCTGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYCLCQC*CALQPG
Trigger: GCCAGGCTGCAGGGCACAGCAGCACTGGCATAGACA...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATGCCTGTCTATGCCAGTaGTGCTGTGCCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYACLCQ*CCALQP
Trigger: AGGCTGCAGGGCACAGCAGCACTGGCATAGACAGGC...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCAGTGACACCAGGACATaGACAGCACACAGAGAATAT +
Preference number: 4 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSSDTRT*TAHREY
Trigger: ATATTCTCTGTGTGCTGTGCATGTCCTGGTGTCACT...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCTGAGATTGTGCCACTaGACTCCACTCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RVQKSESNAQNQKVWHSCLRLCH*TPLQPE
Trigger: CTCAGGCTGGAGTGGAGTGCAGTGGCACAATCTCAG...GCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAACATTCCTGTCCCACTaGAACCTTCCACAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPTFLSH*NLPQLA
Trigger: GGCTAGCTGTGGAAGGTTGCAGTGGGACAGGAATGT...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGTCAGCTGCTATCTGCTaGAAGGCTTGGATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQSAAIC*KAWIVA
Trigger: AGCTACAATCCAAGCCTTCCAGCAGATAGCAGCTGA...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTGCTGGCGGTGAAAATTaGAAAATTCCTCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPAAGGEN*KIPQSQ
Trigger: TTGGCTCTGAGGAATTTTCCAATTTTCACCGCCAGC...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCTCCTGAGTATCATCCTTaGCCTTGTACTCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GTRFLDLLLVALTEEHPPPEYHP*PCTQCS
Trigger: AGAGCACTGAGTACAAGGCCAAGGATGATACTCAGG...AGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCTGCCTCAGAGGGCTaGATGTTCAGCTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLSASEG*MFSFKT
Trigger: TGTTTTGAAGCTGAACATCCAGCCCTCTGAGGCAGA...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGAAGTACACCGCTCTTTaGAAGAAGGTGGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQKYTAL*KKVVVS
Trigger: GGAGACCACCACCTTCTTCCAAAGAGCGGTGTACTT...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp CTGACCCTGACGGGCTGGATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGCATCATAGATTTCCTTaGAGGACATTCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LTLTGWMREGLSMAVFSKHHRFP*RTFLSL
Trigger: CAAAGAAAGGAATGTCCTCCAAGGAAATCTATGATG...CTTACTGAATACAGCCATACTCAGCCCCTCTCGCATCCAGCCCGTCAGGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAACTGCCCAGATTGCTCTaGAGATCTGAGTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLELPRLL*RSECSH
Trigger: ATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp AGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGAATCCCAAAGATCCAGTaGCCACCAGAGTACAGAAGT +
Preference number: 4 (lower is better)
Translates to: RIKRCGTPAQPAYQQLYRIPKIQ*PPEYRS
Trigger: ACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGAT...TCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATATCCCAAAGATCCAGTaGCCACCAGAGTACAGAAGT +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYIPKIQ*PPEYRS
Trigger: ACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGAT...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp AAGTTTTTCCTGATCTGCCGAATAACACCAGGAAAGGTGGGTCGAAGCAACTCTAAACCTGGAGGTGTGTaGACCTTGGACAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KFFLICRITPGKVGRSNSKPGGV*TLDRAS
Trigger: GGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTT...AGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAATGCACCTAATGCGTTaGAAGAGAAGGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPMHLMR*KRRWGG
Trigger: CCCTCCCCACCTTCTCTTCCAACGCATTAGGTGCAT...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGAACCCACCCCCATCCTaGCCCAAAATTAATTTGCCC +
Preference number: 4 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQNPPPS*PKINLP
Trigger: GGGCAAATTAATTTTGGGCCAGGATGGGGGTGGGTT...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCAAGACAGAACTGGTGTaGGCGCCAAAGGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: HQSTEVRIKCSESKGVALKTELV*APKATC
Trigger: GCAGGTTGCCTTTGGCGCCCACACCAGTTCTGTCTT...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAAAAGACAGAACTGGTGTaGGCGCCAAAGGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQKTELV*APKATC
Trigger: GCAGGTTGCCTTTGGCGCCCACACCAGTTCTGTCTT...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAATATGTAAGAAAAGGCTaGTGCACGTTGGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSEYVRKG*CTLEDR
Trigger: TCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATA...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTCATCAATATATTACCTaGCTTAGGAGGGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPAHQYIT*LRRVRA
Trigger: TGCCCTCACCCTCCTAAGCCAGGTAATATATTGATG...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TCTGAGGGCATTTGTAGAGAAAAGTCCAAGGCAATGTCCCCTGGGTCTGAGAGAATGGGGGCCAGCATTTaGAAAGCATATATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SEGICREKSKAMSPGSERMGASI*KAYIPV
Trigger: CACTGGGATATATGCTTTCCAAATGCTGGCCCCCAT...TCTCTCAGACCCAGGGGACATTGCCTTGGACTTTTCTCTACAAATGCCCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCGGTCCTAGGCCATTCTaGAAGCAAGCTGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGGPRPF*KQAGFC
Trigger: GCAAAACCCAGCTTGCTTCCAGAATGGCCTAGGACC...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCCAAACACAGGACTCTaGCATATCCCCACACCCCCA +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMPNTGL*HIPTPP
Trigger: TGGGGGTGTGGGGATATGCCAGAGTCCTGTGTTTGG...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACCCGTGTTGGCCAGGATaGTCTCTATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYPCWPG*SLSLDL
Trigger: GAGGTCAAGAGATAGAGACCATCCTGGCCAACACGG...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCTGTCCCTAGCTCTTaGCCCTCTACTCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLPVPSS*PSTQGL
Trigger: AAGTCCCTGAGTAGAGGGCCAAGAGCTAGGGACAGG...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 72 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTaGGAAGACAGAGCGTGCCTGTCTATGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KQAKYVRKGWCT*EDRACLSMPVL
Trigger: CAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CAA 72 bp GGGGGCCAGCATTTGGAAAGCATATATCCCAGTGACTaGAGTATTTGCTATGCAACCTCCTGGACGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GGQHLESIYPSD*SICYATSWTRN
Trigger: GTTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAGTCACTGGGATATATGCTTTCCAAATGCTGGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 72 bp TTGATCATGGGGCAGTTCACCCAAGTACACCGCTCTTaGGAAGAAGGTGGTGGTCTCCAGGATTTTATGCAT +
Preference number: 4 (lower is better)
Translates to: LIMGQFTQVHRS*EEGGGLQDFMH
Trigger: ATGCATAAAATCCTGGAGACCACCACCTTCTTCCAAAGAGCGGTGTACTTGGGTGAACTGCCCCATGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 72 bp CAGCGTTGGAAGTCTGAGTTTGGAGAGCTGCCCAGATaGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: QRWKSEFGELPR*LWRSECSHSLS
Trigger: AGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 72 bp AGATTGGCCATAACAATGGTGTCCACAATGACCGGGTaGGCTGAAGTTCCTAAGGTAAACTGTAGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: RLAITMVSTMTG*AEVPKVNCSPR
Trigger: ACGGGGACTACAGTTTACCTTAGGAACTTCAGCCAACCCGGTCATTGTGGACACCATTGTTATGGCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAACAGCCACAGAACAGTaGGTACAACCAGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: QSFNPKDPVATRVQKSESTATEQ*VQPELP
Trigger: TGGGAGTTCTGGTTGTACTCACTGTTCTGTGGCTGT...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAGGCTTGGATTGTAGCTaGGTAAGAACGAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: QSFNPKDPVATRVQKSESGLDCS*VRTKGQ
Trigger: CTGTCCCTTCGTTCTTACTCAGCTACAATCCAAGCC...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATCCGGATATAAGCTGGCGGTaGAAATTGGAAAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: QERTFCLQILKLLTSGDPDISWR*KLENSS
Trigger: TGAGGAATTTTCCAATTTTCACCGCCAGCTTATATC...CGGATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp AGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGAGCCTGCATTGCTTTTTaGTATAAGCTGGCGGTGAAA +
Preference number: 4 (lower is better)
Translates to: RIKRCGTPAQPAYQQLYRACIAF*YKLAVK
Trigger: TTTCACCGCCAGCTTATATCAAAAAGCAATGCAGGC...TCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACCGCTCTCAGCAGTCTGGAAACTaGGATCTTGCAACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: DILYHILIMGQFTQVHRSQQSGN*DLATAK
Trigger: TTTGGCAGTTGCAAGATCTCAGTTTCCAGACTGCTG...AGAGCGGTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTGCAGCGTTGGAAGTCTaGGTTTGGAGAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRAALEV*VWRAAQ
Trigger: CTGGGCAGCTCTCCAAACTCAGACTTCCAACGCTGC...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTAGGTGGAAATCGTCTTaGTTAAAGAGCTCACTATCC +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPARWKSS*LKSSLS
Trigger: GGATAGTGAGCTCTTTAATCAAGACGATTTCCACCT...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATCCGTTCATGTTTATCAGCTaGGCCAAAACCAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: QERTFCLQILKLLTSGDPFMFIS*AKTKSK
Trigger: TTTGCTCTTGGTTTTGGCTCAGCTGATAAACATGAA...CGGATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGGTGAACAGTGGAGACTaGGGCATATCCAAAAATTTT +
Preference number: 4 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQVNSGD*GISKNF
Trigger: AAAATTTTTGGATATGCCTCAGTCTCCACTGTTCAC...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGAGATCATATGGTGTTCTaGCAGATTCTACCATCCAGC +
Preference number: 4 (lower is better)
Translates to: RIKRCGTPAQPAYQQLYRDHMVF*QILPSS
Trigger: GCTGGATGGTAGAATCTGTCAGAACACCATATGATC...TCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGTTTCTTTCTCCTTCTaGAAGCGGATCTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSVSFSF*KRICSC
Trigger: ACAGCTACAGATCCGCTTTCAGAAGGAGAAAGAAAC...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR TCA 90 bp CACCTGAGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACAATTCTTCACGTTTCTaGGGACCTTCTCGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HLSIILGLVLSALNGQFHNSSRF*GPSRLG
Trigger: ACCAAGCCGAGAAGGTCCTCAGAAACGTGAAGAATT...GTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTAGCACCAAACCAGCCTTaGCACACAATTGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALAPNQP*HTIVGW
Trigger: CCAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGC...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACGAACCTTCCTACTCCTaGCATTTTCCCTACCCTCAC +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYEPSYS*HFPYPH
Trigger: GTGAGGGTAGGGAAAATGTCAGGAGTAGGAAGGTTC...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGATAAGAGGCAATGAGTaGCACCAGGACATGCACAGC +
Preference number: 4 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLIRGNE*HQDMHS
Trigger: GCTGTGCATGTCCTGGTGTCACTCATTGCCTCTTAT...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AAGTTTTTCCTGATCTGCCGAATAACACCAGGAAAGGTGGGTCGAAGCAACTCTTGGAGGTTCATCAGCTaGTATCTGCTGGAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KFFLICRITPGKVGRSNSWRFIS*YLLEGL
Trigger: CAAGCCTTCCAGCAGATAGCAGCTGATGAACCTCCA...AGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAACTGAGATCTTGCAACTaGCAAACCTTTAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLELRSCN*QTFKGA
Trigger: GGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAG...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAAGTCTACGGCATAGTCTaGCTCAGAGGGCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQVYGIV*LRGLDV
Trigger: AACATCCAGCCCTCTGAGGCAGACTATGCCGTAGAC...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACCAGGGGGAGAATCAGTaGCATCGTGGCTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYQGENQ*HRGCKF
Trigger: GAATTTACAGCCACGATGGCACTGATTCTCCCCCTG...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTTTCGTTCACCATATCTaGCTTCTTCTGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVFVHHI*LLLNLH
Trigger: GTGAAGGTTCAGAAGAAGGCAGATATGGTGAACGAA...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGTTCACCAGCAAAGTATaGCCTGAGGGGCAACACTGG +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMFTSKV*PEGQHW
Trigger: CCAGTGTTGCCCCTCAGGGCATACTTTGCTGGTGAA...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACGCAGATGGAGTCGGATaGTGGGGCCTCATGCCCACT +
Preference number: 4 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNADGVG*WGLMPT
Trigger: AGTGGGCATGAGGCCCCAGCATCCGACTCCATCTGC...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCTTGGAAGACAGAGCGTaGCTGTCTATGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HQSTEVRIKCSESKGVALLEDRA*LSMPVL
Trigger: CAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAA...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGTTGGAAGACAGAGCGTaGCTGTCTATGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLLEDRA*LSMPVL
Trigger: CAGCACTGGCATAGACAGGCACGCTCTGTCTTCCAA...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCTTCATCAACTCTGCTGTaGTCTCATGTGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: GTRFLDLLLVALTEEHPPSSTLL*SHVQDQ
Trigger: TTGATCCTGCACATGAGACCACAGCAGAGTTGATGA...AGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTGATAGTTCATACTATTaGCTACAGCAGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPADSSYY*LQQQSC
Trigger: GCAAGACTGCTGCTGTAGCCAATAGTATGAACTATC...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTCTCACTATCCTCCAGTaGCCCAATGATCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: MREGLSMAVFSKETGSRLLTILQ*PNDPSI
Trigger: AATGGAAGGATCATTGGGCCACTGGAGGATAGTGAG...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CACCTGAGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACCTCACTATCCTCCAGTaGCCCAATGATCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: HLSIILGLVLSALNGQFHLTILQ*PNDPSI
Trigger: AATGGAAGGATCATTGGGCCACTGGAGGATAGTGAG...GTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTCCAGTTTCGGCTCTTTaGTCATCGGATTATTACACA +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVPVSAL*SSDYYT
Trigger: TGTGTAATAATCCGATGACCAAAGAGCCGAAACTGG...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp ATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGAGGGCACAAGGATGTTaGCGTAAACCTGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: IQWPPEYRSQNQMLRIKRRAQGC*RKPGGV
Trigger: CACACCTCCAGGTTTACGCCAACATCCTTGTGCCCT...CCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCAATGCACCTAATGCGTTaGAAGAGAAGGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GHELYLLSTSRLLTHEIAMHLMR*KRRWGG
Trigger: CCCTCCCCACCTTCTCTTCCAACGCATTAGGTGCAT...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTGGGACTAAAGGCAAATaGGGCTTCACGATGCAGCGA +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTGTKGK*GFTMQR
Trigger: TCGCTGCATCGTGAAGCCCCATTTGCCTTTAGTCCC...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTACATCAATATATTACCTaGCTTAGGAGGGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLHQYIT*LRRVRA
Trigger: TGCCCTCACCCTCCTAAGCCAGGTAATATATTGATG...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAATCCTGGACGAGAAACTaGGAAAAGGCACACTTCCGC +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQSWTRN*EKAHFR
Trigger: GCGGAAGTGTGCCTTTTCCCAGTTTCTCGTCCAGGA...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAGCACACAGAGAATATaGTCTACTCTTGTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLSTQRI*STLVFP
Trigger: AGGGAAGACAAGAGTAGACCATATTCTCTGTGTGCT...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAACCACGAATAACTGGTTaGTTGGAAAACATGGTACTT +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSEPRITG*LENMVL
Trigger: AAGTACCATGTTTTCCAACCAACCAGTTATTCGTGG...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCATTCTGCTGGAGGGGTaGCAGAAACTGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: HQSTEVRIKCSESKGVALILLEG*QKLKCS
Trigger: GCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGAAT...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGGGATTTTATGCATTGTaGTGGTTTCTAACTCATCAG +
Preference number: 4 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQGFYAL*WFLTHQ
Trigger: CTGATGAGTTAGAAACCATCACAATGCATAAAATCC...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGGGATTTTATGCATTGTaGTGGTTTCTAACTCATCAG +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLGFYAL*WFLTHQ
Trigger: CTGATGAGTTAGAAACCATCACAATGCATAAAATCC...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCATACTCTACCACATCTTaGTCATGGGGCAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESYSTTS*SWGSSP
Trigger: GGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTA...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGCATTTGGCTGATTCATaGTATACTCTACCACATCTT +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLHLADS*YTLPHL
Trigger: AAGATGTGGTAGAGTATATCATGAATCAGCCAAATG...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGGAACAACATTTGGCTaGTTCATGATATACTCTACC +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVGTTFG*FMIYST
Trigger: GGTAGAGTATATCATGAATCAGCCAAATGTTGTTCC...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCCTGCAGTACACGGCATaGGACAAAATGAAATCCATT +
Preference number: 4 (lower is better)
Translates to: RIKCSESKGVALLPSRLILQYTA*DKMKSI
Trigger: AATGGATTTCATTTTGTCTCATGCCGTGTACTGCAG...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATAGGTGGAAATCGTCTTaGTTAAAGAGCTCACTATCC +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYRWKSS*LKSSLS
Trigger: GGATAGTGAGCTCTTTAATCAAGACGATTTCCACCT...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTCCTTTTGGTTGCGCTaGCAGAAGAGCATCCACCTT +
Preference number: 4 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSSFWLR*QKSIHL
Trigger: AAGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGA...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGTCCTCACCTTGTTATAGATATGTGTCAGAGTCTGGAAGGCATGATAATCATTCTGTGCTTCTCTGGTaGCAGGGTCAACGACAGCCA +
Preference number: 4 (lower is better)
Translates to: QSSPCYRYVSESGRHDNHSVLLW*QGQRQP
Trigger: TGGCTGTCGTTGACCCTGTCACCAGAGAAGCACAGA...ATGATTATCATGCCTTCCAGACTCTGACACATATCTATAACAAGGTGAGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGAGATCATATGGTGTTCTaGCAGATTCTACCATCCAGC +
Preference number: 4 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRDHMVF*QILPSS
Trigger: GCTGGATGGTAGAATCTGTCAGAACACCATATGATC...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTATAGTGCACTGATATaGTACTTTCGCCCGGCTAAA +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYYSALI*YFRPAK
Trigger: TTTAGCCGGGCGAAAGTATCATATCAGTGCACTATA...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTTATTGGGCAGATCTTaGTCAAGATTTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPALLGRS*SRFERL
Trigger: CAGCCTTTCAAATCTTGATCAAGATCTGCCCAATAA...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CACCTGAGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACTGCCATTCCACCCTCTaGCTAGAAGAATGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: HLSIILGLVLSALNGQFHCHSTL*LEECSL
Trigger: TAAAGAGCATTCTTCTAGTCAGAGGGTGGAATGGCA...GTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp ACAGGAGTCTTGGTATTCTTCAGCACGGATAGCATCATTATGCGAAGAAATCTTCACGATGCAGCGACATaGAGACAGAACTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TGVLVFFSTDSIIMRRNLHDAAT*RQNWCG
Trigger: CCCACACCAGTTCTGTCTTCATGTCGCTGCATCGTG...AAGATTTCTTCGCATAATGATGCTATCCGTGCTGAAGAATACCAAGACTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAAGCATATATCCCAGTaGCTTGAGTATTTGCTATGC +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLKHISQ*LEYLLC
Trigger: GCATAGCAAATACTCAAGTCACTGGGATATATGCTT...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAAGTCTCCACTATGGCATaGTTGAGAGAGAAAATAATT +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSEVSTMA*LREKII
Trigger: AATTATTTTCTCTCTCAATCATGCCATAGTGGAGAC...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAATTGTCACTCTCAGGGTaGTGTCTGACTGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQLSLSG*CLTVQV
Trigger: GACTTGGACAGTCAGACATCACCCTGAGAGTGACAA...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACCCTCCAGGTCGGGGTaGAGATCTCTTAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQPSRSG*RSLNFP
Trigger: TGGAAAATTAAGAGATCTGCACCCCGACCTGGAGGG...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATCCGTGGAAACTGAGATCTTaGAACTGCCAAACCTTTAAA +
Preference number: 4 (lower is better)
Translates to: QERTFCLQILKLLTSGDPWKLRS*NCQTFK
Trigger: TTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCA...CGGATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTTCTATTCCCAATCTATaGAGACCCTCCATTACCCGA +
Preference number: 4 (lower is better)
Translates to: MREGLSMAVFSKETGSRLSIPNL*RPSITR
Trigger: TCGGGTAATGGAGGGTCTGCATAGATTGGGAATAGA...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATATGTGTTCATCAACTCTaGTGTGGTCTCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SIILGLVLSALNGQFHAICVHQL*CGLMCR
Trigger: CCTGCACATGAGACCACAGCAGAGTTGATGAACACA...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAAGAGAGCTGCCCAGATTaGTCTGGAGATCTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQESCPD*SGDLSV
Trigger: AACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTC...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTCAAATCAATGGTTTTTaGCCTTTTCTTAGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPAQINGF*PFLRGV
Trigger: GACGCCTCTAAGAAAAGGGCAAAAACCATTGATTTG...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp GAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCAAATCAATGGTTTTTaGCCTTTTCTTAGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: EVRIKCSESKGVALLPSRQINGF*PFLRGV
Trigger: GACGCCTCTAAGAAAAGGGCAAAAACCATTGATTTG...CCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAGACAATCCGCACAGCTaGTTCCAGTTTCGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQDNPHS*FQFRLF
Trigger: AAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTC...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATAGGCCCAAAATTAATTTaGCCAGCCACTGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: SIILGLVLSALNGQFHAIGPKLI*PATAPN
Trigger: GTTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCC...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCGGCACAGTATCCATCTaGACCCTCTCCTCGTATTTT +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGGTVSI*TLSSYF
Trigger: AAAATACGAGGAGAGGGTGCAGATGGATACTGTGCC...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATAGGCACAGTATCCATCTaGACCCTCTCCTCGTATTTT +
Preference number: 4 (lower is better)
Translates to: SIILGLVLSALNGQFHAIGTVSI*TLSSYF
Trigger: AAAATACGAGGAGAGGGTGCAGATGGATACTGTGCC...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGCGAACGCAGAGATTCTaGAGACATTTAAAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQRTQRF*RHLKAQ
Trigger: TTGGGCTTTTAAATGTCTGCAGAATCTCTGCGTTCG...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGCTGCTAAAAACTCACTaGCTTCTAACAACAATGGAG +
Preference number: 4 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQLLKTH*LLTTME
Trigger: CTCCATTGTTGTTAGAAGCCAGTGAGTTTTTAGCAG...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTTTTCACCAATCACTGTaGTGTTTACCTCAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLFHQSL*CLPQFL
Trigger: AAGGAACTGAGGTAAACACCACAGTGATTGGTGAAA...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTCGTGGAACAACATTTaGCTGATTCATGATATACTC +
Preference number: 4 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQSWNNI*LIHDIL
Trigger: GAGTATATCATGAATCAGCCAAATGTTGTTCCACGA...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGCCTAGAATTGATTCGTaGAACAACATTTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLPRIDS*NNIWLI
Trigger: AATCAGCCAAATGTTGTTCCACGAATCAATTCTAGG...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGCTGCCCAGATTGCTCTaGAGATCTGAGTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLLPRLL*RSECSH
Trigger: ATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGTCCAAGCTCCTGGGTTaGCTTTCAGCTGAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMSKLLG*LSAESS
Trigger: GCTACTTTCAGCTGAAAGCCAACCCAGGAGCTTGGA...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTCCAGTTTCGGCTCTTTaGTCATCGGATTATTACACA +
Preference number: 4 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEAPVSAL*SSDYYT
Trigger: TGTGTAATAATCCGATGACCAAAGAGCCGAAACTGG...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAAAAACTGTTTTTCAAATaGGGTGATTTCCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GVALLPSRLISSCIDRSEKLFFK*GDFLSF
Trigger: GAAGGACAGGAAATCACCCCATTTGAAAAACAGTTT...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACATCCCAAAGATCCAGTaGCCACCAGAGTACAGAAGT +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYIPKIQ*PPEYRS
Trigger: ACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGAT...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACCATGGTGGCTCTAGCTaGCCCTGCTTTCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNHGGSS*PCFPRQ
Trigger: CTGTCTCGGAAAGCAGGGCCAGCTAGAGCCACCATG...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTGATTATAAAAGAGGATaGCCAGTTCTGGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLDYKRG*PVLVFL
Trigger: AAGGAAGACCAGAACTGGCCATCCTCTTTTATAATC...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTATGTAAGAAAAGGCTaGTGCACGTTGGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYYVRKG*CTLEDR
Trigger: TCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATA...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTAAAATTACACAACAATaGGACAGGCGCGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: MREGLSMAVFSKETGSRLKITQQ*DRRGGS
Trigger: TGAACCACCGCGCCTGTCCCATTGTTGTGTAATTTT...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp GGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCTTCATCAGCTGCTATCTaGCTTCTAACAACAATGGAG +
Preference number: 4 (lower is better)
Translates to: GTRFLDLLLVALTEEHPPSSAAI*LLTTME
Trigger: CTCCATTGTTGTTAGAAGCCAGATAGCAGCTGATGA...AGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438277.5
CDS-3UTR TCA 90 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTGCAGGGGTGACAGAAACTaGAATGCAGCCTCCAATATT +
Preference number: 4 (lower is better)
Translates to: KQAKYVRKGWCTLEDRACRGDRN*NAASNI
Trigger: AATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCT...GCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCTGCTGGAGGGGTGACAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGGGTGACAGAAACTaGAATGCAGCCTCCAATATT +
Preference number: 4 (lower is better)
Translates to: SAGGVTETEMQPPILHDSRGDRN*NAASNI
Trigger: AATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCT...ACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR TCA 90 bp GGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCTGACGAGGGATATCTGTaGTCTCCTTTGAACAATAAA +
Preference number: 4 (lower is better)
Translates to: GTRFLDLLLVALTEEHPPDEGYL*SPLNNK
Trigger: TTTATTGTTCAAAGGAGATCACAGATATCCCTCGTC...AGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGAGATATAAGCTGGCGGTaGAAATTGGAAAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: RIKRCGTPAQPAYQQLYRDISWR*KLENSS
Trigger: TGAGGAATTTTCCAATTTTCACCGCCAGCTTATATC...TCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCCCAAAGAGGAACCCCTaGACCTCATCAATAGGATCA +
Preference number: 4 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSPKRNP*TSSIGS
Trigger: TGATCCTATTGATGAGGTTCAGGGGTTCCTCTTTGG...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCATGATCTGATGATCCAAAGGGCATTCCATTaGACAGCACAACGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PPILHDSRNNRYRHDLMIQRAFH*TAQRAE
Trigger: CTCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTG...GATCATCAGATCATGACGGTACCGATTATTCCTACTATCATGCAATATTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp ACCTCATCAATAGGATCATTTTCACCAATCACTGTGGTGTTTACCTCAGTTCCTCAAAGGGCATTCCATTaGACAGCACAACGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TSSIGSFSPITVVFTSVPQRAFH*TAQRAE
Trigger: CTCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTG...AGGAACTGAGGTAAACACCACAGTGATTGGTGAAAATGATCCTATTGATGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAGGAACAACATTTGGCTaGTTCATGATATACTCTACC +
Preference number: 4 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLEGTTFG*FMIYST
Trigger: GGTAGAGTATATCATGAATCAGCCAAATGTTGTTCC...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTTGTTACTGGATTTCTaGTGTTTGATGGCATCATAC +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPALLLDF*CLMASY
Trigger: GTATGATGCCATCAAACATCAGAAATCCAGTAACAA...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGACTGCAGTACACGGCATaGGACAAAATGAAATCCATT +
Preference number: 4 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRLQYTA*DKMKSI
Trigger: AATGGATTTCATTTTGTCTCATGCCGTGTACTGCAG...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGCTGCAGTACACGGCATaGGACAAAATGAAATCCATT +
Preference number: 4 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQLQYTA*DKMKSI
Trigger: AATGGATTTCATTTTGTCTCATGCCGTGTACTGCAG...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp TCTGAGGGCATTTGTAGAGAAAAGTCCAAGGCAATGTCCCCTGGGTCTGAGAGATTCATGTTTATCAGCTaGGCCAAAACCAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SEGICREKSKAMSPGSERFMFIS*AKTKSK
Trigger: TTTGCTCTTGGTTTTGGCTCAGCTGATAAACATGAA...TCTCTCAGACCCAGGGGACATTGCCTTGGACTTTTCTCTACAAATGCCCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCACGGGGCCATTTGTACTaGACAAGCTCATACTGGAAA +
Preference number: 4 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESRGHLY*TSSYWK
Trigger: TTTCCAGTATGAGCTTGTTCAGTACAAATGGCCCCG...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCACTTGGTCTTCCTCTaGGGTACAAATCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: HQSTEVRIKCSESKGVALHLVFL*GTNPTE
Trigger: CTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTG...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGCCTGGCTTAGGAGGGTaGGGGCACAGTATCCATCTG +
Preference number: 4 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALPGLGG*GHSIHL
Trigger: CAGATGGATACTGTGCCCTCACCCTCCTAAGCCAGG...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTGCTGCATGTCACTCTaGCATATCACATTATTTCAT +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPACCMSL*HITLFH
Trigger: ATGAAATAATGTGATATGTCAGAGTGACATGCAGCA...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATACATTTCCATTCCCATaGAATGCAATACCACAGTAC +
Preference number: 4 (lower is better)
Translates to: TQERTFCLQILKLLTSGDTFPFP*NAIPQY
Trigger: GTACTGTGGTATTGCATTTCATGGGAATGGAAATGT...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTTGCAGCCTCCAATATTaGATGATAGTAGGAATAATC +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVCSLQY*MIVGII
Trigger: GATTATTCCTACTATCATGCAATATTGGAGGCTGCA...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCAATTTAAACAAATTCTaGTGGAGGGGTGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSNLNKF*WRGDRN
Trigger: GTTTCTGTCACCCCTCCAGCAGAATTTGTTTAAATT...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGGTGCTCTCTACAAGATaGTTTCTGAGTTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQVLSTR*FLSSFN
Trigger: GTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCAC...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATGTGCTCTCTACAAGATaGTTTCTGAGTTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYVLSTR*FLSSFN
Trigger: GTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCAC...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ACCTCATCAATAGGATCATTTTCACCAATCACTGTGGTGTTTACCTCAGTTCCTGTCTACGGCATAGTCTaGCTCAGAGGGCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: TSSIGSFSPITVVFTSVPVYGIV*LRGLDV
Trigger: AACATCCAGCCCTCTGAGGCAGACTATGCCGTAGAC...AGGAACTGAGGTAAACACCACAGTGATTGGTGAAAATGATCCTATTGATGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp ATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGCTCATAGTAGCCTCTTaGTTCCTTCCGATTCCGATC +
Preference number: 4 (lower is better)
Translates to: IQWPPEYRSQNQMLRIKRLIVAS*FLPIPI
Trigger: GATCGGAATCGGAAGGAAGCAAGAGGCTACTATGAG...CCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCGCATCATACAGTAACTaGCGTCCAGAAGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: RVQKSESNAQNQKVWHSCASYSN*RPEGLS
Trigger: TGATAGCCCTTCTGGACGGCAGTTACTGTATGATGC...GCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCGAGAGCTGCCCAGATTaGTCTGGAGATCTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTESCPD*SGDLSV
Trigger: AACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTC...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGATTCGTTCACCATATCTaGCTTCTTCTGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRFVHHI*LLLNLH
Trigger: GTGAAGGTTCAGAAGAAGGCAGATATGGTGAACGAA...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp TTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTGACAATCCGCACAGCTaGTTCCAGTTTCGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FNPKDPVATRVQKSESNADNPHS*FQFRLF
Trigger: AAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTC...AGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTCATTTTCTTCCAGTTaGTGCTGCCATTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSSFSSS*CCHSTL
Trigger: GAGGGTGGAATGGCAGCAGCAACTGGAAGAAAATGA...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AATCGGTACCGTCATGATCTGATGATCCAATATTTTGACTGGCTTCTACAAAATTTTCCCTACCCTCACTaGAACCCACCCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: NRYRHDLMIQYFDWLLQNFPYPH*NPPPSW
Trigger: CCAGGATGGGGGTGGGTTGCAGTGAGGGTAGGGAAA...ATTTTGTAGAAGCCAGTCAAAATATTGGATCATCAGATCATGACGGTACCGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp AAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCTTCACCAGCAAAGTATaGCCTGAGGGGCAACACTGG +
Preference number: 4 (lower is better)
Translates to: KLKCSLQYCMIVGIIGTVFTSKV*PEGQHW
Trigger: CCAGTGTTGCCCCTCAGGGCATACTTTGCTGGTGAA...GACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTCTTGAGTATTTGCTATaGAACCTCCTGGACGAGAAA +
Preference number: 4 (lower is better)
Translates to: MREGLSMAVFSKETGSRLLEYLL*NLLDEK
Trigger: TTTCTCGTCCAGGAGGTTGCATAGCAAATACTCAAG...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp AAGTTTTTCCTGATCTGCCGAATAACACCAGGAAAGGTGGGTCGAAGCAACTCTATTCGAGCAGCAGTCTaGAAACTGAGATCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: KFFLICRITPGKVGRSNSIRAAV*KLRSCN
Trigger: GTTGCAAGATCTCAGTTTCCAGACTGCTGCTCGAAT...AGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp GGTTTGGGTCTTTCAGAGGCTGTCAGTAGAAGAGCCTCAAGGGTATCAGATTCATTTGGAAGAAGGTGGTaGTCTCCAGGATTTTATGCA +
Preference number: 4 (lower is better)
Translates to: GLGLSEAVSRRASRVSDSFGRRW*SPGFYA
Trigger: TGCATAAAATCCTGGAGACCACCACCTTCTTCCAAA...TGAATCTGATACCCTTGAGGCTCTTCTACTGACAGCCTCTGAAAGACCCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp GATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACCGCTCTCTCTTTGGAAGAAGGTaGTGGTCTCCAGGATTTTAT +
Preference number: 4 (lower is better)
Translates to: DILYHILIMGQFTQVHRSLFGRR*WSPGFY
Trigger: ATAAAATCCTGGAGACCACCACCTTCTTCCAAAGAG...AGAGCGGTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTCGTGGAACAACATTTaGCTGATTCATGATATACTC +
Preference number: 4 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPASWNNI*LIHDIL
Trigger: GAGTATATCATGAATCAGCCAAATGTTGTTCCACGA...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACTGGTACTCGATTCTTaGATCTCCTTTTGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQLVLDS*ISFWLR
Trigger: GCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAG...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TCTGAGGGCATTTGTAGAGAAAAGTCCAAGGCAATGTCCCCTGGGTCTGAGAGAATTTCACAGGAGTCTTaGTATTCTTCAGCACGGATA +
Preference number: 4 (lower is better)
Translates to: SEGICREKSKAMSPGSERISQES*YSSARI
Trigger: TATCCGTGCTGAAGAATACCAAGACTCCTGTGAAAT...TCTCTCAGACCCAGGGGACATTGCCTTGGACTTTTCTCTACAAATGCCCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAAGGGAGGGATTTAATTaGCACCTGATGAATCATGTT +
Preference number: 4 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSREGFN*HLMNHV
Trigger: AACATGATTCATCAGGTGCCAATTAAATCCCTCCCT...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAGATTATAAAAGAGGATaGCCAGTTCTGGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLDYKRG*PVLVFL
Trigger: AAGGAAGACCAGAACTGGCCATCCTCTTTTATAATC...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGTTCACTGCGGTTGGGTaGGGAATAAGTGTAATATTT +
Preference number: 4 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQFTAVG*GISVIF
Trigger: AAATATTACACTTATTCCCCACCCAACCGCAGTGAA...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp ACAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACAAGGCTGGTGCACGTTaGAAGACAGAGCGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TETEMQPPILHDSRNNRYKAGAR*KTERAC
Trigger: ACAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTT...GTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACTCTACTCAGGGACTTaGTCCCCACAATCAGATGAA +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQLYSGT*SPQSDE
Trigger: TTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGAG...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAAAGGGGTGACAGAAACTaGAATGCAGCCTCCAATATT +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQRGDRN*NAASNI
Trigger: AATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCT...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCATTCTGCTGGAGGGGTaGCAGAAACTGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: KLKCSLQYCMIVGIIGTVILLEG*QKLKCS
Trigger: GCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGAAT...GACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR TCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCCCAAAGAGGAACCCCTaGACCTCATCAATAGGATCA +
Preference number: 4 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTPKRNP*TSSIGS
Trigger: TGATCCTATTGATGAGGTTCAGGGGTTCCTCTTTGG...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAATCTTCTCCAGGACACTaGCCACATGTTCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQSSPGH*PHVQLS
Trigger: TGAAAGTTGAACATGTGGTCAGTGTCCTGGAGAAGA...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACAGGTGGAAATCGTCTTaGTTAAAGAGCTCACTATCC +
Preference number: 4 (lower is better)
Translates to: IKELTILQWPNDPSIADHRWKSS*LKSSLS
Trigger: GGATAGTGAGCTCTTTAATCAAGACGATTTCCACCT...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGCTGAGGTTTTTAAGATaGTATTTTCGAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQLRFLR*YFRGGG
Trigger: TCCACCTCCTCGAAAATATCATCTTAAAAACCTCAG...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AGCAGAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCTCTGTGCTTCTCTGGTaGCAGGGTCAACGACAGCCA +
Preference number: 4 (lower is better)
Translates to: SRINPQNAIHFYIRIFLLSVLLW*QGQRQP
Trigger: TGGCTGTCGTTGACCCTGTCACCAGAGAAGCACAGA...GAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCATCTGTTCGTACAATCTaGTCAGCATCCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESSVRTI*SASTNR
Trigger: CCTGTTTGTGGATGCTGATCAGATTGTACGAACAGA...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAGTTTCTTTCTCCTTCTaGAAGCGGATCTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESVSFSF*KRICSC
Trigger: ACAGCTACAGATCCGCTTTCAGAAGGAGAAAGAAAC...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR TCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAATGCCATTCCACCCTCTaGCTAGAAGAATGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQCHSTL*LEECSL
Trigger: TAAAGAGCATTCTTCTAGTCAGAGGGTGGAATGGCA...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAACAGTTTCCAGAGTTTaGACATTCAGCACAATCAAT +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLTVSRV*TFSTIN
Trigger: ATTGATTGTGCTGAATGTTCAAACTCTGGAAACTGT...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTTCGAAATGCAACAATaGCAGATGTACAACTTTACC +
Preference number: 4 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYFEMQQ*QMYNFT
Trigger: GGTAAAGTTGTACATCTGTCATTGTTGCATTTCGAA...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGATGCAGCCTCCAATATTaGATGATAGTAGGAATAATC +
Preference number: 4 (lower is better)
Translates to: RIKRCGTPAQPAYQQLYRCSLQY*MIVGII
Trigger: GATTATTCCTACTATCATGCAATATTGGAGGCTGCA...TCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAAATTTAAACAAATTCTaGTGGAGGGGTGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLNLNKF*WRGDRN
Trigger: GTTTCTGTCACCCCTCCAGCAGAATTTGTTTAAATT...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGGTGCCATTTCATTGGTaGTCTCTACAAGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLVPFHW*SLQDAF
Trigger: GAAAGCATCTTGTAGAGAGCACCAATGAAATGGCAC...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCTGAGATCTTGCAACTaGCAAACCTTTAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLLRSCN*QTFKGA
Trigger: GGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAG...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTGCGCCACGAATTATATCTaGTATCAACCTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KQAKYVRKGWCTLEDRACATNYI*YQPPGC
Trigger: ACAACCTGGAGGTTGATAGCAGATATAATTCGTGGC...GCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACGCCACTCCAGCATCTTaGATCCCATCAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: IHDILYHILIMGQFTQVHATPAS*IPSTSS
Trigger: TGAAGATGTTGATGGGATGCAAGATGCTGGAGTGGC...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTCTCCAGGATTTTATaGATTGTGATGGTTTCTAAC +
Preference number: 4 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEAVSRIL*IVMVSN
Trigger: GTTAGAAACCATCACAATGCATAAAATCCTGGAGAC...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GTCTGGAAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATTGGCATCATACAGTAACTaGCGTCCAGAAGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: VWKLRSCNCQTFKGAISLASYSN*RPEGLS
Trigger: TGATAGCCCTTCTGGACGGCAGTTACTGTATGATGC...CAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTGCTTCAGAACATCCCTaGAGTACACGGCATGAGACA +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRASEHP*STRHET
Trigger: TGTCTCATGCCGTGTACTGCAGGGATGTTCTGAAGC...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATATTATGGGATCTCCTTTTGGTTaGGCTGACAGAAGAGCATCC +
Preference number: 4 (lower is better)
Translates to: HQLCCGLMCRINYENHIMGSPFG*ADRRAS
Trigger: GGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCC...CATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTGTAGAGATGACCAGATaGAACGGAGAAAATATTAAT +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLVEMTR*NGENIN
Trigger: ATTAATATTTTCTCCGTTGCATCTGGTCATCTCTAC...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTTTGATCTCAATCAAATaGCACTGTACACAGAACATA +
Preference number: 4 (lower is better)
Translates to: VRIKCSESKGVALLPSRLLISIK*HCTQNI
Trigger: TATGTTCTGTGTACAGTGGCATTTGATTGAGATCAA...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTGTTCAATTCGAAATaGAACAATGACAGATGTACA +
Preference number: 4 (lower is better)
Translates to: NAQNQKVWHSCPAGLSAVVFNSK*NNDRCT
Trigger: TGTACATCTGTCATTGTTGCATTTCGAATTGAACAC...AACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTACTTCCTGCTTCTACTaGCTCCCAGAAGTGTCATTT +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTTSCFY*LPEVSF
Trigger: AAATGACACTTCTGGGAGGCAGTAGAAGCAGGAAGT...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTGCAATTCATTGACTTCCTaGTTCTACTGCCTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: KQAKYVRKGWCTLEDRACNSLTS*FYCLPE
Trigger: TTCTGGGAGGCAGTAGAAGCAGGAAGTCAATGAATT...GCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCAGGAGAGGACCTTTTaGTTGCAAATCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMQERTF*LQILKL
Trigger: GAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTG...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAACATTTAAAAGCCCAATaGTGTTCCCAAGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQHLKAQ*CSQARG
Trigger: GCCTCTTGCTTGGGAACAGCATTGGGCTTTTAAATG...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCATGGAGGTTCATCAGCTaGTATCTGGCTTCTAACAAC +
Preference number: 4 (lower is better)
Translates to: GHELYLLSTSRLLTHEIAWRFIS*YLASNN
Trigger: GTTGTTAGAAGCCAGATAGCAGCTGATGAACCTCCA...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438277.5
CDS-3UTR CCA 90 bp AGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCGCTGGCGGTGAAAATTaGAAAATTCCTCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RVQKSESNAQNQKVWHSCAGGEN*KIPQSQ
Trigger: TTGGCTCTGAGGAATTTTCCAATTTTCACCGCCAGC...GCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAAGGTGCCATTTCATTaGTGCTCTCTACAAGATGCT +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYKVPFH*CSLQDA
Trigger: AGCATCTTGTAGAGAGCACCAATGAAATGGCACCTT...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATTCGAGCAGCAGTCTaGAAACTGAGATCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQIRAAV*KLRSCN
Trigger: GTTGCAAGATCTCAGTTTCCAGACTGCTGCTCGAAT...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCATCATCAACTCTGCTGTaGTCTCATGTGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESSSTLL*SHVQDQ
Trigger: TTGATCCTGCACATGAGACCACAGCAGAGTTGATGA...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATAAGTACACCGCTCTTTaGAAGAAGGTGGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYKYTAL*KKVVVS
Trigger: GGAGACCACCACCTTCTTCCAAAGAGCGGTGTACTT...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCGCAGCAGTCTTGCCTTaGGAATCCAAGATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGAAVLP*ESKIVN
Trigger: ATTTACTATCTTGGATTCCCAAGGCAAGACTGCTGC...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATAGCAGCAGTCTTGCCTTaGGAATCCAAGATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: SIILGLVLSALNGQFHAIAAVLP*ESKIVN
Trigger: ATTTACTATCTTGGATTCCCAAGGCAAGACTGCTGC...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATGATAGTTCATACTATTaGCTACAGCAGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: EVEIVLIKELTILQWPNDDSSYY*LQQQSC
Trigger: GCAAGACTGCTGCTGTAGCCAATAGTATGAACTATC...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTACATCATAGATTTCCTTaGAGGACATTCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLHHRFP*RTFLSL
Trigger: CAAAGAAAGGAATGTCCTCCAAGGAAATCTATGATG...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAAAACTGTTTTTCAAATaGGGTGATTTCCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLKLFFK*GDFLSF
Trigger: GAAGGACAGGAAATCACCCCATTTGAAAAACAGTTT...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGAAAGGATCAGCCACTTaGTCTTCCTCTGAGGTACAA +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLKGSAT*SSSEVQ
Trigger: TTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTT...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCAAAAGGATCAGCCACTTaGTCTTCCTCTGAGGTACAA +
Preference number: 4 (lower is better)
Translates to: GHELYLLSTSRLLTHEIAKGSAT*SSSEVQ
Trigger: TTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTT...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTATTCTGGAAGCAAGCTaGGTTTTGCATTATTCAGAG +
Preference number: 4 (lower is better)
Translates to: MREGLSMAVFSKETGSRLILEAS*VLHYSE
Trigger: CTCTGAATAATGCAAAACCCAGCTTGCTTCCAGAAT...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
3UTR CAA 72 bp CAGCCACTGCACCAAACCAGCCTTGACACACAATTGTaGGTTGGATTTCAATTAAACAATGCACCTAATGCG +
Preference number: 4 (lower is better)
Translates to: QPLHQTSLDTQL*VGFQLNNAPNA
Trigger: CGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGCAGTGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CAA 72 bp GCCCAGCCACTGCACCAAACCAGCCTTGACACACAATaGTTGGTTGGATTTCAATTAAACAATGCACCTAAT +
Preference number: 4 (lower is better)
Translates to: AQPLHQTSLDTQ*LVGFQLNNAPN
Trigger: ATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGCAGTGGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CAA 72 bp GGAGGGGTGACAGAAACTGAAATGCAGCCTCCAATATaGCATGATAGTAGGAATAATCGGTACCGTCATGAT +
Preference number: 4 (lower is better)
Translates to: GGVTETEMQPPI*HDSRNNRYRHD
Trigger: ATCATGACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
3UTR CAA 72 bp AACATTTGGCTGATTCATGATATACTCTACCACATCTaGATCATGGGGCAGTTCACCCAAGTACACCGCTCT +
Preference number: 4 (lower is better)
Translates to: NIWLIHDILYHI*IMGQFTQVHRS
Trigger: AGAGCGGTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAATCAGCCAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 72 bp GGGACAATCCGCACAGCTGCTTCCAGTTTCGGCTCTTaGGTCATCGGATTATTACACAAATCAATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GTIRTAASSFGS*VIGLLHKSMVF
Trigger: AAAAACCATTGATTTGTGTAATAATCCGATGACCAAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATATCTGTGATCTCCTTTaGACAATAAAGGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: EVEIVLIKELTILQWPNDICDLL*TIKVWV
Trigger: GACCCAAACCTTTATTGTTCAAAGGAGATCACAGAT...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATGACGAGGGATATCTGTaGTCTCCTTTGAACAATAAA +
Preference number: 4 (lower is better)
Translates to: EVEIVLIKELTILQWPNDDEGYL*SPLNNK
Trigger: TTTATTGTTCAAAGGAGATCACAGATATCCCTCGTC...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AAGTTTTTCCTGATCTGCCGAATAACACCAGGAAAGGTGGGTCGAAGCAACTCTGATATAAGCTGGCGGTaGAAATTGGAAAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: KFFLICRITPGKVGRSNSDISWR*KLENSS
Trigger: TGAGGAATTTTCCAATTTTCACCGCCAGCTTATATC...AGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCTACAAGATGCTTTCTaGGTTCTTTCAACTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTLQDAF*VLSTVP
Trigger: AGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAG...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAACTACAAGATGCTTTCTaGGTTCTTTCAACTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQLQDAF*VLSTVP
Trigger: AGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAG...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAATTCGGTTCTAAGTTCTaGGCTCACAGCTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQFGSKF*AHSCFC
Trigger: ACAAAAACAGCTGTGAGCTCAGAACTTAGAACCGAA...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACTACTCTACCACATCTTaGTCATGGGGCAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNYSTTS*SWGSSP
Trigger: GGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTA...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GGTTTGGGTCTTTCAGAGGCTGTCAGTAGAAGAGCCTCAAGGGTATCAGATTCACATTTGGCTGATTCATaGTATACTCTACCACATCTT +
Preference number: 4 (lower is better)
Translates to: GLGLSEAVSRRASRVSDSHLADS*YTLPHL
Trigger: AAGATGTGGTAGAGTATATCATGAATCAGCCAAATG...TGAATCTGATACCCTTGAGGCTCTTCTACTGACAGCCTCTGAAAGACCCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATATTCATGTTTATCAGCTaGGCCAAAACCAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SIILGLVLSALNGQFHAIFMFIS*AKTKSK
Trigger: TTTGCTCTTGGTTTTGGCTCAGCTGATAAACATGAA...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGTGAACAGTGGAGACTaGGGCATATCCAAAAATTTT +
Preference number: 4 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPVNSGD*GISKNF
Trigger: AAAATTTTTGGATATGCCTCAGTCTCCACTGTTCAC...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCATATAGTGCACTGATATaGTACTTTCGCCCGGCTAAA +
Preference number: 4 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESYSALI*YFRPAK
Trigger: TTTAGCCGGGCGAAAGTATCATATCAGTGCACTATA...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCATCTTGATCAAGATTTaGAAGGCTGTTAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSILIKI*KAVRVL
Trigger: CAGGACCCTAACAGCCTTTCAAATCTTGATCAAGAT...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTATCTTGATCAAGATTTaGAAGGCTGTTAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTILIKI*KAVRVL
Trigger: CAGGACCCTAACAGCCTTTCAAATCTTGATCAAGAT...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCATGATCTGATGATCGGATCTGTAGCTGTTTaGTCTCTTGGTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: PPILHDSRNNRYRHDLMIGSVAV*SLGRSP
Trigger: AGGACTACGACCAAGAGATCAAACAGCTACAGATCC...GATCATCAGATCATGACGGTACCGATTATTCCTACTATCATGCAATATTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGTCCTCACCTTGTTATAGATATGTGTCAGAGTCTGGAAGGCATGATAATCATAATGTCCCCTGGGTCTaGGAGAAAAATCCTACGCAA +
Preference number: 4 (lower is better)
Translates to: QSSPCYRYVSESGRHDNHNVPWV*EKNPTQ
Trigger: TTGCGTAGGATTTTTCTCTCAGACCCAGGGGACATT...ATGATTATCATGCCTTCCAGACTCTGACACATATCTATAACAAGGTGAGGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTAGGCAGAGGTTGCAGTaGGCCAAGGTCACACCATTG +
Preference number: 4 (lower is better)
Translates to: NLYPLGISGIYPEISITTRQRLQ*AKVTPL
Trigger: CAATGGTGTGACCTTGGCTCACTGCAACCTCTGCCT...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGTGGAAATCTCAATGGTaGCAAGTAAGGCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMWKSQW*QVRQGI
Trigger: TATGCCTTGCCTTACTTGTCACCATTGAGATTTCCA...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp ACAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCCCTCCAGGTCGGGGTaGAGATCTCTTAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: TETEMQPPILHDSRNNRYPSRSG*RSLNFP
Trigger: TGGAAAATTAAGAGATCTGCACCCCGACCTGGAGGG...GTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTGTGCCATTTCATTGGTaGTCTCTACAAGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTVPFHW*SLQDAF
Trigger: GAAAGCATCTTGTAGAGAGCACCAATGAAATGGCAC...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCCTGAGATCTTGCAACTaGCAAACCTTTAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTLRSCN*QTFKGA
Trigger: GGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAG...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGTGCTGTGGTCTCATGTaGAGGATCAACTATGAAAAC +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLCCGLM*RINYEN
Trigger: GTTTTCATAGTTGATCCTGCACATGAGACCACAGCA...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATATTATGTGTGTTCATCAACTCTaGTGTGGTCTCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HQLCCGLMCRINYENHIMCVHQL*CGLMCR
Trigger: CCTGCACATGAGACCACAGCAGAGTTGATGAACACA...CATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGAATCAATCCCCAAAATaGTATTCACTTCTACATACG +
Preference number: 4 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQNQSPK*YSLLHT
Trigger: CGTATGTAGAAGTGAATAGCATTTTGGGGATTGATT...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp AGCAGAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCAGGAGCAAGTCTCTGTaGTTCTCTGGTGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: SRINPQNAIHFYIRIFLLRSKSL*FSGDRV
Trigger: GACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCT...GAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATCATATCCAAAAATTTTaGGATTGGACCCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: TQERTFCLQILKLLTSGDHIQKF*DWTLSK
Trigger: TTTGCTAAGGGTCCAATCGCAAAATTTTTGGATATG...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAACATATCCAAAAATTTTaGGATTGGACCCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLEHIQKF*DWTLSK
Trigger: TTTGCTAAGGGTCCAATCGCAAAATTTTTGGATATG...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp GAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGCAGGGGGAGAATCAGTaGCATCGTGGCTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: ESIPKMLFTSTYGYFFSRQGENQ*HRGCKF
Trigger: GAATTTACAGCCACGATGGCACTGATTCTCCCCCTG...CCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTTCTCTTTGTACAGTaGTCCCGTTTCTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HQSTEVRIKCSESKGVALLLFVQ*SRFFLL
Trigger: AAGGAGAAAGAAACGGGAGCACTGTACAAAGAGAAG...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCCTGAGTATCATCCTTaGCCTTGTACTCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRPEYHP*PCTQCS
Trigger: AGAGCACTGAGTACAAGGCCAAGGATGATACTCAGG...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTAAGGTGCCATTTCATTaGTGCTCTCTACAAGATGCT +
Preference number: 4 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTKVPFH*CSLQDA
Trigger: AGCATCTTGTAGAGAGCACCAATGAAATGGCACCTT...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTCTGCCTCAGAGGGCTaGATGTTCAGCTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYSASEG*MFSFKT
Trigger: TGTTTTGAAGCTGAACATCCAGCCCTCTGAGGCAGA...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCTCTTTGGAAGAAGGTaGTGGTCTCCAGGATTTTAT +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLLFGRR*WSPGFY
Trigger: ATAAAATCCTGGAGACCACCACCTTCTTCCAAAGAG...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAATTTCACAGGAGTCTTaGTATTCTTCAGCACGGATA +
Preference number: 4 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPISQES*YSSARI
Trigger: TATCCGTGCTGAAGAATACCAAGACTCCTGTGAAAT...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGATGAATCATGTTATTaGGCAGATCTTGATCAAGAT +
Preference number: 4 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSDESCY*ADLDQD
Trigger: ATCTTGATCAAGATCTGCCCAATAACATGATTCATC...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATAAGGGAGGGATTTAATTaGCACCTGATGAATCATGTT +
Preference number: 4 (lower is better)
Translates to: SIILGLVLSALNGQFHAIREGFN*HLMNHV
Trigger: AACATGATTCATCAGGTGCCAATTAAATCCCTCCCT...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp CCACGAATAACTGGTTGGTTGGAAAACATGGTACTTGATAATCTTTTGTTGTCAAAACCTGGAGGTGTGTaGACCTTGGACAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PRITGWLENMVLDNLLLSKPGGV*TLDRAS
Trigger: GGAAGCTCTGTCCAAGGTCCACACACCTCCAGGTTT...TGACAACAAAAGATTATCAAGTACCATGTTTTCCAACCAACCAGTTATTCGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGATCTGTGATCTCCTTTaGACAATAAAGGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMICDLL*TIKVWV
Trigger: GACCCAAACCTTTATTGTTCAAAGGAGATCACAGAT...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCAATCTGTGATCTCCTTTaGACAATAAAGGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GHELYLLSTSRLLTHEIAICDLL*TIKVWV
Trigger: GACCCAAACCTTTATTGTTCAAAGGAGATCACAGAT...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGGACGAGGGATATCTGTaGTCTCCTTTGAACAATAAA +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLDEGYL*SPLNNK
Trigger: TTTATTGTTCAAAGGAGATCACAGATATCCCTCGTC...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGTCCTCACCTTGTTATAGATATGTGTCAGAGTCTGGAAGGCATGATAATCATGCCTGCATTGCTTTTTaGTATAAGCTGGCGGTGAAA +
Preference number: 4 (lower is better)
Translates to: QSSPCYRYVSESGRHDNHACIAF*YKLAVK
Trigger: TTTCACCGCCAGCTTATATCAAAAAGCAATGCAGGC...ATGATTATCATGCCTTCCAGACTCTGACACATATCTATAACAAGGTGAGGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp TGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTTCTGTCCCAGCAGTCTGGAAACTaGGATCTTGCAACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: CHIFFYPKLLNMRFYFLSQQSGN*DLATAK
Trigger: TTTGGCAGTTGCAAGATCTCAGTTTCCAGACTGCTG...GGACAGAAAATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCCATTTGGCTGATTCATaGTATACTCTACCACATCTT +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGHLADS*YTLPHL
Trigger: AAGATGTGGTAGAGTATATCATGAATCAGCCAAATG...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCATGGATTTCTGATGTTTaGTGGCATCATACAGTAACT +
Preference number: 4 (lower is better)
Translates to: QSFNPKDPVATRVQKSESWISDV*WHHTVT
Trigger: AGTTACTGTATGATGCCATCAAACATCAGAAATCCA...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCTGGATTTCTGATGTTTaGTGGCATCATACAGTAACT +
Preference number: 4 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGWISDV*WHHTVT
Trigger: AGTTACTGTATGATGCCATCAAACATCAGAAATCCA...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp ATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATCCTTCCATTGCTGATCACTTGTTACTGGATTTCTaGTGTTTGATGGCATCATAC +
Preference number: 4 (lower is better)
Translates to: IKELTILQWPNDPSIADHLLLDF*CLMASY
Trigger: GTATGATGCCATCAAACATCAGAAATCCAGTAACAA...GTGATCAGCAATGGAAGGATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCACTGAGGTTTTTAAGATaGTATTTTCGAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESLRFLR*YFRGGG
Trigger: TCCACCTCCTCGAAAATATCATCTTAAAAACCTCAG...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CCACGAATAACTGGTTGGTTGGAAAACATGGTACTTGATAATCTTTTGTTGTCACCTTCGGCCTCAGTTTaGTTGCACTGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PRITGWLENMVLDNLLLSPSASV*LHCVCL
Trigger: AAGACAGACACAGTGCAATCAAACTGAGGCCGAAGG...TGACAACAAAAGATTATCAAGTACCATGTTTTCCAACCAACCAGTTATTCGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp CATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATATTATGTCTGTTCGTACAATCTaGTCAGCATCCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: HQLCCGLMCRINYENHIMSVRTI*SASTNR
Trigger: CCTGTTTGTGGATGCTGATCAGATTGTACGAACAGA...CATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp CAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGTATATCCCAGTGACTTaGGTATTTGCTATGCAACCT +
Preference number: 4 (lower is better)
Translates to: QSTEVRIKCSESKGVALLYIPVT*VFAMQP
Trigger: AGGTTGCATAGCAAATACTCAAGTCACTGGGATATA...CAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR TCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCTTTCCCATTACTTGTaGACACTGGGGTGTACAATC +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRLSHYL*TLGCTI
Trigger: GATTGTACACCCCAGTGTTCACAAGTAATGGGAAAG...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430075.5
CDS-3UTR GCA 90 bp GTCTGGAAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATTGGTGCCATTTCATTGGTaGTCTCTACAAGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: VWKLRSCNCQTFKGAISLVPFHW*SLQDAF
Trigger: GAAAGCATCTTGTAGAGAGCACCAATGAAATGGCAC...CAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGTGGAAACTGAGATCTTaGAACTGCCAAACCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLWKLRS*NCQTFK
Trigger: TTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCA...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CACCTGAGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACAGCTTCAAAACATTATaGAGAGAAAGGCCTTCTATT +
Preference number: 4 (lower is better)
Translates to: HLSIILGLVLSALNGQFHSFKTL*RERPSI
Trigger: AATAGAAGGCCTTTCTCTGCATAATGTTTTGAAGCT...GTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GTCTGGAAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATTGTGCTGTGGTCTCATGTaGAGGATCAACTATGAAAAC +
Preference number: 4 (lower is better)
Translates to: VWKLRSCNCQTFKGAISLCCGLM*RINYEN
Trigger: GTTTTCATAGTTGATCCTGCACATGAGACCACAGCA...CAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp TGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTTCTGTCCGCCACTCCAGCATCTTaGATCCCATCAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: CHIFFYPKLLNMRFYFLSATPAS*IPSTSS
Trigger: TGAAGATGTTGATGGGATGCAAGATGCTGGAGTGGC...GGACAGAAAATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACCGCTCTAATCAATCCCCAAAATaGTATTCACTTCTACATACG +
Preference number: 4 (lower is better)
Translates to: DILYHILIMGQFTQVHRSNQSPK*YSLLHT
Trigger: CGTATGTAGAAGTGAATAGCATTTTGGGGATTGATT...AGAGCGGTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACCTCATAGTAGCCTCTTaGTTCCTTCCGATTCCGATC +
Preference number: 4 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNLIVAS*FLPIPI
Trigger: GATCGGAATCGGAAGGAAGCAAGAGGCTACTATGAG...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACGTCTCCAGGATTTTATaGATTGTGATGGTTTCTAAC +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYVSRIL*IVMVSN
Trigger: GTTAGAAACCATCACAATGCATAAAATCCTGGAGAC...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACGAAGTCAGAATCAAATaGTCAGAATCAAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYEVRIK*SESKGV
Trigger: CACACCTTTTGATTCTGAGCATTTGATTCTGACTTC...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR GCA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTGCGCCAAAGGCAACCTaGAGGGCTCACATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: NLYPLGISGIYPEISITTAPKAT*RAHIKG
Trigger: TCCTTTTATGTGAGCCCTGCAGGTTGCCTTTGGCGC...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATGCTGGCGGTGAAAATTaGAAAATTCCTCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYAGGEN*KIPQSQ
Trigger: TTGGCTCTGAGGAATTTTCCAATTTTCACCGCCAGC...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAATTTCACCAATCACTGTaGTGTTTACCTCAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQFHQSL*CLPQFL
Trigger: AAGGAACTGAGGTAAACACCACAGTGATTGGTGAAA...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTATTCGAGCAGCAGTCTaGAAACTGAGATCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRIRAAV*KLRSCN
Trigger: GTTGCAAGATCTCAGTTTCCAGACTGCTGCTCGAAT...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp TTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCTCTTTGGAAGAAGGTaGTGGTCTCCAGGATTTTAT +
Preference number: 4 (lower is better)
Translates to: FNPKDPVATRVQKSESNALFGRR*WSPGFY
Trigger: ATAAAATCCTGGAGACCACCACCTTCTTCCAAAGAG...AGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AAGTTTTTCCTGATCTGCCGAATAACACCAGGAAAGGTGGGTCGAAGCAACTCTTCGTGGAACAACATTTaGCTGATTCATGATATACTC +
Preference number: 4 (lower is better)
Translates to: KFFLICRITPGKVGRSNSSWNNI*LIHDIL
Trigger: GAGTATATCATGAATCAGCCAAATGTTGTTCCACGA...AGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGCCTAGAATTGATTCGTaGAACAACATTTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLPRIDS*NNIWLI
Trigger: AATCAGCCAAATGTTGTTCCACGAATCAATTCTAGG...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp AAGTTTTTCCTGATCTGCCGAATAACACCAGGAAAGGTGGGTCGAAGCAACTCTCCTAGAATTGATTCGTaGAACAACATTTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: KFFLICRITPGKVGRSNSPRIDS*NNIWLI
Trigger: AATCAGCCAAATGTTGTTCCACGAATCAATTCTAGG...AGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACCTGGTACTCGATTCTTaGATCTCCTTTTGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNLVLDS*ISFWLR
Trigger: GCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAG...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAAATTTCACAGGAGTCTTaGTATTCTTCAGCACGGATA +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQISQES*YSSARI
Trigger: TATCCGTGCTGAAGAATACCAAGACTCCTGTGAAAT...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGAGGGAGGGATTTAATTaGCACCTGATGAATCATGTT +
Preference number: 4 (lower is better)
Translates to: IQWPPEYRSQNQMLRIKRREGFN*HLMNHV
Trigger: AACATGATTCATCAGGTGCCAATTAAATCCCTCCCT...CCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAAACTGTTTTTCAAATaGGGTGATTTCCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QSFNPKDPVATRVQKSESKLFFK*GDFLSF
Trigger: GAAGGACAGGAAATCACCCCATTTGAAAAACAGTTT...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTTCACTGCGGTTGGGTaGGGAATAAGTGTAATATTT +
Preference number: 4 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSFTAVG*GISVIF
Trigger: AAATATTACACTTATTCCCCACCCAACCGCAGTGAA...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTGGTAACATCATTTTCTaGGGCATTTGGTTAATTTTG +
Preference number: 4 (lower is better)
Translates to: MREGLSMAVFSKETGSRLGNIIF*GIWLIL
Trigger: CAAAATTAACCAAATGCCCCAGAAAATGATGTTACC...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAATTACCACGAATAACTaGTTGGTTGGAAAACATGGT +
Preference number: 4 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPITTNN*LVGKHG
Trigger: ACCATGTTTTCCAACCAACCAGTTATTCGTGGTAAT...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp CCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCATGATCTGATGATCACTCTACTCCACAGCTaGCTTCTAACAACAATGGAG +
Preference number: 4 (lower is better)
Translates to: PPILHDSRNNRYRHDLMITLLHS*LLTTME
Trigger: CTCCATTGTTGTTAGAAGCCAGCTGTGGAGTAGAGT...GATCATCAGATCATGACGGTACCGATTATTCCTACTATCATGCAATATTGGAGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430075.5
3UTR CAA 72 bp TCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATaGGTGCTCTCTACAAGATGCTTTCTGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SCNCQTFKGAIS*VLSTRCFLSSF
Trigger: GAAAGAACTCAGAAAGCATCTTGTAGAGAGCACCAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
3UTR CAA 72 bp TGTCAGAGTCTGGAAGGCATGATAATCATCCACTTCTaGGGCAACATAATTATATGCTCTAAGAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: CQSLEGMIIIHF*GNIIICSKNSH
Trigger: GTGGCTGTTCTTAGAGCATATAATTATGTTGCCCAAGAAGTGGATGATTATCATGCCTTCCAGACTCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp TGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTTCTGTCCGCCTGCATTGCTTTTTaGTATAAGCTGGCGGTGAAA +
Preference number: 4 (lower is better)
Translates to: CHIFFYPKLLNMRFYFLSACIAF*YKLAVK
Trigger: TTTCACCGCCAGCTTATATCAAAAAGCAATGCAGGC...GGACAGAAAATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAATTGGTAGGAAAATTCTaGCTAAGATCCTTCATGACA +
Preference number: 4 (lower is better)
Translates to: FTESKGSATWSSSEVQIQLVGKF*LRSFMT
Trigger: TGTCATGAAGGATCTTAGTCAGAATTTTCCTACCAA...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCATTGGTAGGAAAATTCTaGCTAAGATCCTTCATGACA +
Preference number: 4 (lower is better)
Translates to: GHELYLLSTSRLLTHEIALVGKF*LRSFMT
Trigger: TGTCATGAAGGATCTTAGTCAGAATTTTCCTACCAA...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGTCTTCTCCAGGACACTaGCCACATGTTCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: ESIPKMLFTSTYGYFFSRSSPGH*PHVQLS
Trigger: TGAAAGTTGAACATGTGGTCAGTGTCCTGGAGAAGA...CCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCGGAACAACATTTGGCTaGTTCATGATATACTCTACC +
Preference number: 4 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTGTTFG*FMIYST
Trigger: GGTAGAGTATATCATGAATCAGCCAAATGTTGTTCC...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTTGTTACTGGATTTCTaGTGTTTGATGGCATCATAC +
Preference number: 4 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSLLLDF*CLMASY
Trigger: GTATGATGCCATCAAACATCAGAAATCCAGTAACAA...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp TGTGTTCATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATCTGAGGTTTTTAAGATaGTATTTTCGAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CVHQLCCGLMCRINYENHLRFLR*YFRGGG
Trigger: TCCACCTCCTCGAAAATATCATCTTAAAAACCTCAG...ATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATGAACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCGAGCACCATCCAAATTaGAATCTCTTAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: HQSTEVRIKCSESKGVALEHHPN*NLLTLS
Trigger: TGAAAGAGTTAAGAGATTTCAATTTGGATGGTGCTC...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCTTATTGGGCAGATCTTaGTCAAGATTTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTLLGRS*SRFERL
Trigger: CAGCCTTTCAAATCTTGATCAAGATCTGCCCAATAA...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR TCA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTGCACCAAACCAGCCTTaGCACACAATTGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSTSSESLTTKIKPILSGAPNQP*HTIVGW
Trigger: CCAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGC...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp AGCAGAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCTCATAGTAGCCTCTTaGTTCCTTCCGATTCCGATC +
Preference number: 4 (lower is better)
Translates to: SRINPQNAIHFYIRIFLLLIVAS*FLPIPI
Trigger: GATCGGAATCGGAAGGAAGCAAGAGGCTACTATGAG...GAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAGTCTCCAGGATTTTATaGATTGTGATGGTTTCTAAC +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQVSRIL*IVMVSN
Trigger: GTTAGAAACCATCACAATGCATAAAATCCTGGAGAC...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp AGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCGGATAGCATCATTATaGGAAGAAATCTTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: RVQKSESNAQNQKVWHSCRIASL*EEIFRR
Trigger: TCTACGAAAGATTTCTTCGCATAATGATGCTATCCG...GCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp GAGGTGGAAATCGTCTTGATTAAAGAGCTCACTATCCTCCAGTGGCCCAATGATTCTGATCCTCTAACATaGAATATCAGAACTTGGATT +
Preference number: 4 (lower is better)
Translates to: EVEIVLIKELTILQWPNDSDPLT*NIRTWI
Trigger: AATCCAAGTTCTGATATTGCATGTTAGAGGATCAGA...ATCATTGGGCCACTGGAGGATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438277.5
CDS-3UTR CCA 90 bp CAGTCCTCACCTTGTTATAGATATGTGTCAGAGTCTGGAAGGCATGATAATCATAAGGTGCCATTTCATTaGTGCTCTCTACAAGATGCT +
Preference number: 4 (lower is better)
Translates to: QSSPCYRYVSESGRHDNHKVPFH*CSLQDA
Trigger: AGCATCTTGTAGAGAGCACCAATGAAATGGCACCTT...ATGATTATCATGCCTTCCAGACTCTGACACATATCTATAACAAGGTGAGGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp CCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCATGATCTGATGATCTTTGGAAGAAGGTGGTaGTCTCCAGGATTTTATGCA +
Preference number: 4 (lower is better)
Translates to: PPILHDSRNNRYRHDLMIFGRRW*SPGFYA
Trigger: TGCATAAAATCCTGGAGACCACCACCTTCTTCCAAA...GATCATCAGATCATGACGGTACCGATTATTCCTACTATCATGCAATATTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGCTCACTATCCTCCAGTaGCCCAATGATCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALLTILQ*PNDPSI
Trigger: AATGGAAGGATCATTGGGCCACTGGAGGATAGTGAG...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR TCA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTTCAGTTCCTTTCACCTaGGTATCATCCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PSTSSESLTTKIKPILSGSVPFT*VSSLAL
Trigger: CAAGGCCAAGGATGATACTCAGGTGAAAGGAACTGA...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACTGGATTTCTGATGTTTaGTGGCATCATACAGTAACT +
Preference number: 4 (lower is better)
Translates to: IHDILYHILIMGQFTQVHWISDV*WHHTVT
Trigger: AGTTACTGTATGATGCCATCAAACATCAGAAATCCA...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAAGCTTCAAAACATTATaGAGAGAAAGGCCTTCTATT +
Preference number: 4 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQSFKTL*RERPSI
Trigger: AATAGAAGGCCTTTCTCTGCATAATGTTTTGAAGCT...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCGTAGAGATGACCAGATaGAACGGAGAAAATATTAAT +
Preference number: 4 (lower is better)
Translates to: HQSTEVRIKCSESKGVALVEMTR*NGENIN
Trigger: ATTAATATTTTCTCCGTTGCATCTGGTCATCTCTAC...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp TTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCGGATAGCATCATTATaGGAAGAAATCTTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: FNPKDPVATRVQKSESNARIASL*EEIFRR
Trigger: TCTACGAAAGATTTCTTCGCATAATGATGCTATCCG...AGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR GCA 90 bp TTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTGAAGTCAGAATCAAATaGTCAGAATCAAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FNPKDPVATRVQKSESNAEVRIK*SESKGV
Trigger: CACACCTTTTGATTCTGAGCATTTGATTCTGACTTC...AGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CCA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTCTGGTACTCGATTCTTaGATCTCCTTTTGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: NLYPLGISGIYPEISITTLVLDS*ISFWLR
Trigger: GCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAG...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGGATGAATCATGTTATTaGGCAGATCTTGATCAAGAT +
Preference number: 4 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMDESCY*ADLDQD
Trigger: ATCTTGATCAAGATCTGCCCAATAACATGATTCATC...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCATTACTTGTGAACACTaGGGTGTACAATCTCACTCT +
Preference number: 4 (lower is better)
Translates to: QKLKCSLQYCMIVGIIGTITCEH*GVQSHS
Trigger: AGAGTGAGATTGTACACCCCAGTGTTCACAAGTAAT...GGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430075.5
CDS-3UTR TCA 90 bp AGCAGAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCTTCGGTTCTAAGTTCTaGGCTCACAGCTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SRINPQNAIHFYIRIFLLFGSKF*AHSCFC
Trigger: ACAAAAACAGCTGTGAGCTCAGAACTTAGAACCGAA...GAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTTCTTCTCCAGGACACTaGCCACATGTTCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: NLYPLGISGIYPEISITTSSPGH*PHVQLS
Trigger: TGAAAGTTGAACATGTGGTCAGTGTCCTGGAGAAGA...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR GCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTTGCAGCCTCCAATATTaGATGATAGTAGGAATAATC +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRCSLQY*MIVGII
Trigger: GATTATTCCTACTATCATGCAATATTGGAGGCTGCA...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR GCA 90 bp GAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTAATTTAAACAAATTCTaGTGGAGGGGTGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: ETEMQPPILHDSRNNRYRNLNKF*WRGDRN
Trigger: GTTTCTGTCACCCCTCCAGCAGAATTTGTTTAAATT...ACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR GCA 90 bp TGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTTCTGTCCGTGCTCTCTACAAGATaGTTTCTGAGTTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: CHIFFYPKLLNMRFYFLSVLSTR*FLSSFN
Trigger: GTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCAC...GGACAGAAAATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTTCTATTCCCAATCTATaGAGACCCTCCATTACCCGA +
Preference number: 4 (lower is better)
Translates to: PSTSSESLTTKIKPILSGSIPNL*RPSITR
Trigger: TCGGGTAATGGAGGGTCTGCATAGATTGGGAATAGA...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GTCTGGAAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATTGAATCAATCCCCAAAATaGTATTCACTTCTACATACG +
Preference number: 4 (lower is better)
Translates to: VWKLRSCNCQTFKGAISLNQSPK*YSLLHT
Trigger: CGTATGTAGAAGTGAATAGCATTTTGGGGATTGATT...CAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACCAAATCAATGGTTTTTaGCCTTTTCTTAGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNQINGF*PFLRGV
Trigger: GACGCCTCTAAGAAAAGGGCAAAAACCATTGATTTG...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CAGTCCTCACCTTGTTATAGATATGTGTCAGAGTCTGGAAGGCATGATAATCATGAAGTCAGAATCAAATaGTCAGAATCAAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: QSSPCYRYVSESGRHDNHEVRIK*SESKGV
Trigger: CACACCTTTTGATTCTGAGCATTTGATTCTGACTTC...ATGATTATCATGCCTTCCAGACTCTGACACATATCTATAACAAGGTGAGGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CCA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTTCATCAACTCTGCTGTaGTCTCATGTGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: PSTSSESLTTKIKPILSGSSTLL*SHVQDQ
Trigger: TTGATCCTGCACATGAGACCACAGCAGAGTTGATGA...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGTTTGGAAGAAGGTGGTaGTCTCCAGGATTTTATGCA +
Preference number: 4 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALFGRRW*SPGFYA
Trigger: TGCATAAAATCCTGGAGACCACCACCTTCTTCCAAA...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
3UTR CAA 72 bp ATAGTTCATACTATTGGCTACAGCAGCAGTCTTGCCTaGGGAATCCAAGATAGTAAATCTAGCATAATCATC +
Preference number: 4 (lower is better)
Translates to: IVHTIGYSSSLA*GIQDSKSSIII
Trigger: GATGATTATGCTAGATTTACTATCTTGGATTCCCAAGGCAAGACTGCTGCTGTAGCCAATAGTATGAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTCTACAAGATGCTTTCTaGGTTCTTTCAACTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PSTSSESLTTKIKPILSGLQDAF*VLSTVP
Trigger: AGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAG...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGGGATTTTATGCATTGTaGTGGTTTCTAACTCATCAG +
Preference number: 4 (lower is better)
Translates to: ESIPKMLFTSTYGYFFSRGFYAL*WFLTHQ
Trigger: CTGATGAGTTAGAAACCATCACAATGCATAAAATCC...CCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACGAGCACCATCCAAATTaGAATCTCTTAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNEHHPN*NLLTLS
Trigger: TGAAAGAGTTAAGAGATTTCAATTTGGATGGTGCTC...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR GCA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTGCCACGAATTATATCTaGTATCAACCTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PSTSSESLTTKIKPILSGATNYI*YQPPGC
Trigger: ACAACCTGGAGGTTGATAGCAGATATAATTCGTGGC...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CCA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTGATAGTTCATACTATTaGCTACAGCAGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: NLYPLGISGIYPEISITTDSSYY*LQQQSC
Trigger: GCAAGACTGCTGCTGTAGCCAATAGTATGAACTATC...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CCA 90 bp TGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATTTTCTGTCCCATCATAGATTTCCTTaGAGGACATTCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: CHIFFYPKLLNMRFYFLSHHRFP*RTFLSL
Trigger: CAAAGAAAGGAATGTCCTCCAAGGAAATCTATGATG...GGACAGAAAATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR TCA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGTTGGTAGGAAAATTCTaGCTAAGATCCTTCATGACA +
Preference number: 4 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALLVGKF*LRSFMT
Trigger: TGTCATGAAGGATCTTAGTCAGAATTTTCCTACCAA...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CCA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTTTTCACCAATCACTGTaGTGTTTACCTCAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PSTSSESLTTKIKPILSGFHQSL*CLPQFL
Trigger: AAGGAACTGAGGTAAACACCACAGTGATTGGTGAAA...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR GCA 90 bp AATCGGTACCGTCATGATCTGATGATCCAATATTTTGACTGGCTTCTACAAAATAGCTTCAAAACATTATaGAGAGAAAGGCCTTCTATT +
Preference number: 4 (lower is better)
Translates to: NRYRHDLMIQYFDWLLQNSFKTL*RERPSI
Trigger: AATAGAAGGCCTTTCTCTGCATAATGTTTTGAAGCT...ATTTTGTAGAAGCCAGTCAAAATATTGGATCATCAGATCATGACGGTACCGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS TCA 90 bp GGGCAGGGCGGGGCGAGGCGGCAGCGGCAGTGCAGGCTGCGCCAGTaGGAGGCCGACACGCGCCTTTCCCGCGGCTCGACTCAACACCCA +
Preference number: 5 (lower is better)
Translates to: GQGGARRQRQCRLRQ*EADTRLSRGSTQHP
Trigger: TGGGTGTTGAGTCGAGCCGCGGGAAAGGCGCGTGTCGGCCTCTCACTGGCGCAGCCTGCACTGCCGCTGCCGCCTCGCCCCGCCCTGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000430075.5
ENST00000438277.5
CDS GCA 90 bp TCACCGGCAGCGCACCCGCGGCACACGCACCGCTCGCGTCTCCCTTaGAGCCCATGCCCGGGCCGTGGTCAGTCCGCCACAGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: SPAAHPRHTHRSRLP*SPCPGRGQSATVPE
Trigger: CTCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGTGCGTGTGCCGCGGGTGCGCTGCCGGTGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS GCA 90 bp GCGCACCCGCGGCACACGCACCGCTCGCGTCTCCCTTGCAGCCCATaGCCGGGCCGTGGTCAGTCCGCCACAGTGCCAGAGACAACGCCA +
Preference number: 5 (lower is better)
Translates to: AHPRHTHRSRLPCSP*PGRGQSATVPETTP
Trigger: TGGCGTTGTCTCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGTGCGTGTGCCGCGGGTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS CCA 90 bp GCACACGCACCGCTCGCGTCTCCCTTGCAGCCCATGCCCGGGCCGTaGTCAGTCCGCCACAGTGCCAGAGACAACGCCAGGGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: AHAPLASPLQPMPGP*SVRHSARDNARAGR
Trigger: CCGCCCTGCCCTGGCGTTGTCTCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGTGCGTGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS GCA 90 bp CTCCCATTTTATAGCAAACTCCGCTCGCGTCTCCCTTGCAGCCCATaGCCGGGCCGTGGTCAGTCCGCCACAGTGCCAGAGACAACGCCA +
Preference number: 5 (lower is better)
Translates to: LPFYSKLRSRLPCSP*PGRGQSATVPETTP
Trigger: TGGCGTTGTCTCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGAGTTTGCTATAAAATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430075.5
ENST00000438277.5
CDS-3UTR CAA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATCCGCTCGCGTCTCCCTaGCAGCCCATGCCCGGGCCG +
Preference number: 5 (lower is better)
Translates to: TQERTFCLQILKLLTSGDPLASP*QPMPGP
Trigger: CGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGG...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAACCGCTCGCGTCTCCCTaGCAGCCCATGCCCGGGCCG +
Preference number: 5 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLEPLASP*QPMPGP
Trigger: CGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGG...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS TCA 90 bp GGGCGCTCGCGAATAGGGGAAGGGATAGGACACCAGAGGGTAAACTaGGTCACGGTAGAGGCGGAAGCTCAATGTGACAGGGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: GRSRIGEGIGHQRVN*VTVEAEAQCDRGTG
Trigger: CCCTGTGCCCCTGTCACATTGAGCTTCCGCCTCTACCGTGACTCAGTTTACCCTCTGGTGTCCTATCCCTTCCCCTATTCGCGAGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp GTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCACCGCTCGCGTCTCCCTaGCAGCCCATGCCCGGGCCG +
Preference number: 5 (lower is better)
Translates to: VQKSESNAQNQKVWHSCPPLASP*QPMPGP
Trigger: CGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGG...TGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS TCA 90 bp ACACCAGAGGGTAAACTGAGTCACGGTAGAGGCGGAAGCTCAATGTaGCAGGGGCACAGGGTCGCCTTGTGCCCCAAACCCTCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: TPEGKLSHGRGGSSM*QGHRVALCPKPSLC
Trigger: ACAAAGAGAGGGTTTGGGGCACAAGGCGACCCTGTGCCCCTGTCACATTGAGCTTCCGCCTCTACCGTGACTCAGTTTACCCTCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCGGAGGTGTGTGGACCTaGGACAGAGCTTCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: RIKCSESKGVALLPSRLIGGVWT*DRASAG
Trigger: GCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCC...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATCCGAATGCGGTGCTCGTCTaGAGGGAGCCTGACCCTGAC +
Preference number: 5 (lower is better)
Translates to: QERTFCLQILKLLTSGDPNAVLV*REPDPD
Trigger: GTCAGGGTCAGGCTCCCTCAAGACGAGCACCGCATT...CGGATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCCACCACGCCCGGCGCTaGCAAATACCGACCACAGAG +
Preference number: 5 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSHHARR*QIPTTE
Trigger: CTCTGTGGTCGGTATTTGCAAGCGCCGGGCGTGGTG...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTGCTCATAGTAGCCTCTaGCTTCCTTCCGATTCCGAT +
Preference number: 5 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPAHSSL*LPSDSD
Trigger: ATCGGAATCGGAAGGAAGCAAGAGGCTACTATGAGC...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTTCAAAGGGCATTCCATaGAACAGCACAACGGGCAGA +
Preference number: 5 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPSKGIP*NSTTGR
Trigger: TCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTGA...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCGTCCTGACTCAGACCTaGGTACTGTCCCCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSVLTQT*VLSPES
Trigger: AGACTCAGGGGACAGTACCAAGGTCTGAGTCAGGAC...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTAGGAGGTGTGTGGACCTaGGACAGAGCTTCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALGGVWT*DRASAG
Trigger: GCCGGCGGAAGCTCTGTCCAAGGTCCACACACCTCC...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AATAATCGGTACCGTCATGATCTGATGATCCAATATTTTGACTGGCTTCTACAACCGCTCGCGTCTCCCTaGCAGCCCATGCCCGGGCCG +
Preference number: 5 (lower is better)
Translates to: NNRYRHDLMIQYFDWLLQPLASP*QPMPGP
Trigger: CGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGG...TTGTAGAAGCCAGTCAAAATATTGGATCATCAGATCATGACGGTACCGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000430075.5
CDS-3UTR CAA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTTCAACCTCCAGGTTGTaGACCCATGAAATAGCAGGA +
Preference number: 5 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPSTSRL*THEIAG
Trigger: TCCTGCTATTTCATGGGTCAACAACCTGGAGGTTGA...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTTTCTTGGATCTCCTTTaGGTTGCGCTGACAGAAGAG +
Preference number: 5 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPFLDLL*VALTEE
Trigger: CTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAA...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp AATCCATTCCCCCAACAGAGAACTCCGCAATGTCAGCTCCTGCAGCCAGGGCCTACTGGTACTCGATTCTaGGATCTCCTTTTGGTTGCG +
Preference number: 5 (lower is better)
Translates to: NPFPQQRTPQCQLLQPGPTGTRF*DLLLVA
Trigger: CGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT...AGGCCCTGGCTGCAGGAGCTGACATTGCGGAGTTCTCTGTTGGGGGAATGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp GGGTCAGTAGAGCAGGTTTCCTGGCTAAAGGAAACTCTGGGAGTTCTTTCCTCCGTCCTGACTCAGACCTaGGTACTGTCCCCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: GSVEQVSWLKETLGVLSSVLTQT*VLSPES
Trigger: AGACTCAGGGGACAGTACCAAGGTCTGAGTCAGGAC...GGAGGAAAGAACTCCCAGAGTTTCCTTTAGCCAGGAAACCTGCTCTACTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTCACTTCCGCCCACAGTaGTGGACAGCAGCAGTCACC +
Preference number: 5 (lower is better)
Translates to: MREGLSMAVFSKETGSRLHFRPQ*WTAAVT
Trigger: GGTGACTGCTGCTGTCCACAACTGTGGGCGGAAGTG...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGGCTGAGGCAGGAGAATaGTTTGAACTTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQAEAGE*FELGRQ
Trigger: CTGCCTCCCAAGTTCAAACAATTCTCCTGCCTCAGC...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCCCTGAGGTCAGGAGTTaGAGATCAGCCTGGCCAACC +
Preference number: 5 (lower is better)
Translates to: RIKCSESKGVALLPSRLIPEVRS*RSAWPT
Trigger: GGTTGGCCAGGCTGATCTCAAACTCCTGACCTCAGG...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS GCA 90 bp GATCTCTTGGTCGTAGTCCTGCCACTCCGGGACAATCCGCACAGCTaGTTCCAGTTTCGGCTCTTTGGTCATCGGATTATTACACAGAAG +
Preference number: 5 (lower is better)
Translates to: DLLVVVLPLRDNPHS*FQFRLFGHRIITQK
Trigger: CTTCTGTGTAATAATCCGATGACCAAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTCCCGGAGTGGCAGGACTACGACCAAGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465836.1
CDS-3UTR CAA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATGGAGAGCTGCCCAGATaGCTCTGGAGATCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYGELPR*LWRSEC
Trigger: ACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCC...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGGAGAGCTGCCCAGATaGCTCTGGAGATCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEAGELPR*LWRSEC
Trigger: ACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCC...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCCCAATGATCCTTCCATaGCTGATCACTGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSPMILP*LITALC
Trigger: ACAGAGGGCAGTGATCAGCAATGGAAGGATCATTGG...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCTCCACAATGACCGGGTaGGCTGAAGTTCCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSSTMTG*AEVPKV
Trigger: TACCTTAGGAACTTCAGCCAACCCGGTCATTGTGGA...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp CAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTCTTGGATCTCCTTTaGGTTGCGCTGACAGAAGAG +
Preference number: 5 (lower is better)
Translates to: QMLRIKRCGTPAQPAYQQFLDLL*VALTEE
Trigger: CTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAA...CTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGGAGGACCTTCTCGGCTaGGTTCTTTTGTCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLEDLLG*VLLSSL
Trigger: AAGAGAAGACAAAAGAACCAAGCCGAGAAGGTCCTC...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp ATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGAATGCGGTGCTCGTCTaGAGGGAGCCTGACCCTGAC +
Preference number: 5 (lower is better)
Translates to: IQWPPEYRSQNQMLRIKRNAVLV*REPDPD
Trigger: GTCAGGGTCAGGCTCCCTCAAGACGAGCACCGCATT...CCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TCTGCTGGAGGGGTGACAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAAAGGCTGGTGCACGTaGGAAGACAGAGCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SAGGVTETEMQPPILHDSKGWCT*EDRACL
Trigger: CAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTTT...ACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTCATTCAGGCAGAGCCTaGACAAGGTTCAGAACACGA +
Preference number: 5 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPAHSGRA*TRFRTR
Trigger: TCGTGTTCTGAACCTTGTCAAGGCTCTGCCTGAATG...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCCCCAAACCCTCTCTTaGTCCACGAGGCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: HQSTEVRIKCSESKGVALPQTLS*STRPPH
Trigger: GTGAGGAGGCCTCGTGGACAAAGAGAGGGTTTGGGG...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATACTCTACCACATCTaGATCATGGGGCAGTTCACC +
Preference number: 5 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQILYHI*IMGQFT
Trigger: GGTGAACTGCCCCATGATCAAGATGTGGTAGAGTAT...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGCTACAGCAGCAGTCTaGCCTTGGGAATCCAAGATA +
Preference number: 5 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEAATAAV*PWESKI
Trigger: TATCTTGGATTCCCAAGGCAAGACTGCTGCTGTAGC...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTCCCTCCTTGGCCATTTaGGTGATGAAGTTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: VRIKCSESKGVALLPSRLPSLAI*VMKFLA
Trigger: TGCTAAGAACTTCATCACCAAAATGGCCAAGGAGGG...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TCTGAGGGCATTTGTAGAGAAAAGTCCAAGGCAATGTCCCCTGGGTCTGAGAGACCAATGATCCTTCCATaGCTGATCACTGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: SEGICREKSKAMSPGSERPMILP*LITALC
Trigger: ACAGAGGGCAGTGATCAGCAATGGAAGGATCATTGG...TCTCTCAGACCCAGGGGACATTGCCTTGGACTTTTCTCTACAAATGCCCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GAGCATCCACCTTCATTACCAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTTCCTTCGGCCTCAGTTaGATTGCACTGTGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: EHPPSLPSRLPHLLLPEASFGLS*IALCLS
Trigger: AGACAGACACAGTGCAATCAAACTGAGGCCGAAGGA...AGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTGGTAATGAAGGTGGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp ATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGGAGGACCTTCTCGGCTaGGTTCTTTTGTCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: IKRCGTPAQPAYQQLYRQEDLLG*VLLSSL
Trigger: AAGAGAAGACAAAAGAACCAAGCCGAGAAGGTCCTC...CTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTGCACCAAACCAGCCTaGACACACAATTGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPACTKPA*THNCWL
Trigger: CAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGCA...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGAAAGGCTGGTGCACGTaGGAAGACAGAGCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMKGWCT*EDRACL
Trigger: CAGGCACGCTCTGTCTTCCAACGTGCACCAGCCTTT...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCAGGCAGGAGAATTGTTaGAACTTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: STQGLGPHNQMKTHSGRARQENC*NLGGRG
Trigger: ACCTCTGCCTCCCAAGTTCAAACAATTCTCCTGCCT...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp GACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAATACTCTACCACATCTaGATCATGGGGCAGTTCACC +
Preference number: 5 (lower is better)
Translates to: DNQSQLNRRSQDSSSSLEILYHI*IMGQFT
Trigger: GGTGAACTGCCCCATGATCAAGATGTGGTAGAGTAT...TTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp GAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGAGCAGCAGTCTTGCCTaGGGAATCCAAGATAGTAAA +
Preference number: 5 (lower is better)
Translates to: EVRIKCSESKGVALLPSRSSSLA*GIQDSK
Trigger: TTTACTATCTTGGATTCCCAAGGCAAGACTGCTGCT...CCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCCCTCCTTGGCCATTTaGGTGATGAAGTTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYPSLAI*VMKFLA
Trigger: TGCTAAGAACTTCATCACCAAAATGGCCAAGGAGGG...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAGCAAGTCTCTGTGCTTCTCTGGTGACAGGGTCAACGACAGCGAGGTGGAAATCGTCTaGATTAAAGAGCTCACTATC +
Preference number: 5 (lower is better)
Translates to: QEQRSKSLCFSGDRVNDSEVEIV*IKELTI
Trigger: GATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC...GCTGTCGTTGACCCTGTCACCAGAGAAGCACAGAGACTTGCTCCTTTGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATACTGGTACTCGATTCTaGGATCTCCTTTTGGTTGCG +
Preference number: 5 (lower is better)
Translates to: TQERTFCLQILKLLTSGDTGTRF*DLLLVA
Trigger: CGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp GATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACCGCTCTTCCTTCGGCCTCAGTTaGATTGCACTGTGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: DILYHILIMGQFTQVHRSSFGLS*IALCLS
Trigger: AGACAGACACAGTGCAATCAAACTGAGGCCGAAGGA...AGAGCGGTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CACCTGAGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACACGCTGTTTTTCAGTTaGTTGATGAAGCCACCGGGG +
Preference number: 5 (lower is better)
Translates to: HLSIILGLVLSALNGQFHTLFFS*LMKPPG
Trigger: CCCCGGTGGCTTCATCAACAAACTGAAAAACAGCGT...GTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp GGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGACAGATCAGAATCTTTTGTCTTCTCTTaGTACAGTGCTCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: GVALLPSRLISSCIDRSESFVFS*YSAPVS
Trigger: AGAAACGGGAGCACTGTACAAAGAGAAGACAAAAGA...TTCTGATCTGTCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCACCTAATGCGTaGGAAGAGAAGGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: QSFNPKDPVATRVQKSESNAPNA*EEKVGR
Trigger: CCTCCCCACCTTCTCTTCCAACGCATTAGGTGCATT...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTGGCCCAAAATTAATTaGCCCAGCCACTGCACCAAA +
Preference number: 5 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYWPKIN*PSHCTK
Trigger: TTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCCA...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTATGGGGGCCAGCATTaGGAAAGCATATATCCCAGT +
Preference number: 5 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYYGGQH*ESIYPS
Trigger: ACTGGGATATATGCTTTCCAAATGCTGGCCCCCATA...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp GTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTTCAGGAGAGGACCTTTaGCTTGCAAATCCTCAAACT +
Preference number: 5 (lower is better)
Translates to: VRIKCSESKGVALLPSRLSGEDL*LANPQT
Trigger: AGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGA...AAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp GGATTGGCAGTTCATAAATACTCTCAGATTCATGTTTATCAGCTGAGCCAAAACGGGCACAGGGTCGCCTaGTGCCCCAAACCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GLAVHKYSQIHVYQLSQNGHRVA*CPKPSL
Trigger: AAGAGAGGGTTTGGGGCACAAGGCGACCCTGTGCCC...GTTTTGGCTCAGCTGATAAACATGAATCTGAGAGTATTTATGAACTGCCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp ATGCGAGAGGGGCTGAGTATGGCTGTATTCAGTAAGGAAACTGGTAGCAGACTTTCAACCTCCAGGTTGTaGACCCATGAAATAGCAGGA +
Preference number: 5 (lower is better)
Translates to: MREGLSMAVFSKETGSRLSTSRL*THEIAG
Trigger: TCCTGCTATTTCATGGGTCAACAACCTGGAGGTTGA...AAGTCTGCTACCAGTTTCCTTACTGAATACAGCCATACTCAGCCCCTCTCGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACGCTCATAGTAGCCTCTaGCTTCCTTCCGATTCCGAT +
Preference number: 5 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYAHSSL*LPSDSD
Trigger: ATCGGAATCGGAAGGAAGCAAGAGGCTACTATGAGC...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TTTCTTAACATACATCATGCACGTAATCTTCGCTCTCCCAAGAGGCATTCACCCCAAGTACACCGCTCTTaGGAAGAAGGTGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: FLNIHHARNLRSPKRHSPQVHRS*EEGGGL
Trigger: GAGACCACCACCTTCTTCCAAAGAGCGGTGTACTTG...GGGTGAATGCCTCTTGGGAGAGCGAAGATTACGTGCATGATGTATGTTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGGCTACAGCAGCAGTCTaGCCTTGGGAATCCAAGATA +
Preference number: 5 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLATAAV*PWESKI
Trigger: TATCTTGGATTCCCAAGGCAAGACTGCTGCTGTAGC...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCGTTGGAAGTCTGAGTTaGGAGAGCTGCCCAGATTGC +
Preference number: 5 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSVGSLS*ESCPDC
Trigger: GCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAAC...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CTGCCCAGATTGCTCTGGAGATCTGAGTGTTCTCATAGCTTATCTCTTTGGCAGCCCTCCTTGGCCATTTaGGTGATGAAGTTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: LPRLLWRSECSHSLSLWQPSLAI*VMKFLA
Trigger: TGCTAAGAACTTCATCACCAAAATGGCCAAGGAGGG...CTGCCAAAGAGATAAGCTATGAGAACACTCAGATCTCCAGAGCAATCTGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGTCCTTCGGCCTCAGTTaGATTGCACTGTGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLSFGLS*IALCLS
Trigger: AGACAGACACAGTGCAATCAAACTGAGGCCGAAGGA...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCTCCTGTAAAGCCCCATTaGAAGGAATCCCAAAATCCA +
Preference number: 5 (lower is better)
Translates to: GTRFLDLLLVALTEEHPPPVKPH*KESQNP
Trigger: TGGATTTTGGGATTCCTTCAAATGGGGCTTTACAGG...AGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp AGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTAATTTCACAGGAGTCTaGGTATTCTTCAGCACGGAT +
Preference number: 5 (lower is better)
Translates to: SQNQMLRIKRCGTPAQPANFTGV*VFFSTD
Trigger: ATCCGTGCTGAAGAATACCAAGACTCCTGTGAAATT...AGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATACACCAAAGCCATTCTaGAGGGAGGGATTTAATTGG +
Preference number: 5 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYTPKPF*REGFNW
Trigger: CCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTGT...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATTCCAGTTTCGGCTCTTaGGTCATCGGATTATTACAC +
Preference number: 5 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYSSFGS*VIGLLH
Trigger: GTGTAATAATCCGATGACCAAAGAGCCGAAACTGGA...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGAATGCACCTAATGCGTaGGAAGAGAAGGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMNAPNA*EEKVGR
Trigger: CCTCCCCACCTTCTCTTCCAACGCATTAGGTGCATT...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCCAGCTACTCAGGAGGTaGAGTCAGGAGAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGQLLRR*SQENLL
Trigger: CAAGAGATTCTCCTGACTCAACCTCCTGAGTAGCTG...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp GAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCATTGAACAATAAAGGTTaGGGTCTTTCAGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: ESNAQNQKVWHSCPAGLSLNNKG*GLSEAV
Trigger: GACAGCCTCTGAAAGACCCAAACCTTTATTGTTCAA...TGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTGCTCATAGTAGCCTCTaGCTTCCTTCCGATTCCGAT +
Preference number: 5 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTAHSSL*LPSDSD
Trigger: ATCGGAATCGGAAGGAAGCAAGAGGCTACTATGAGC...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTCAAAGGGCATTCCATaGAACAGCACAACGGGCAGA +
Preference number: 5 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSSKGIP*NSTTGR
Trigger: TCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTGA...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AGCATCAGGGGGAGAATCAGTGCCATCGTGGCTGTAAATTCTATAAATATCTTCCAAGTACACCGCTCTTaGGAAGAAGGTGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SIRGRISAIVAVNSINIFQVHRS*EEGGGL
Trigger: GAGACCACCACCTTCTTCCAAAGAGCGGTGTACTTG...GAAGATATTTATAGAATTTACAGCCACGATGGCACTGATTCTCCCCCTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp TGTGTTCATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATCAAGTACACCGCTCTTaGGAAGAAGGTGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: CVHQLCCGLMCRINYENHQVHRS*EEGGGL
Trigger: GAGACCACCACCTTCTTCCAAAGAGCGGTGTACTTG...ATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATGAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp AGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAATGATCCTTCCATaGCTGATCACTGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: RVQKSESNAQNQKVWHSCPMILP*LITALC
Trigger: ACAGAGGGCAGTGATCAGCAATGGAAGGATCATTGG...GCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCGAGGTGGAAATCGTCTaGATTAAAGAGCTCACTATC +
Preference number: 5 (lower is better)
Translates to: RIKCSESKGVALLPSRLIEVEIV*IKELTI
Trigger: GATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGATTGCTTTTGAAGTTGTaGAGGACGATAACCACCTCA +
Preference number: 5 (lower is better)
Translates to: RIKRCGTPAQPAYQQLYRLLLKL*RTITTS
Trigger: TGAGGTGGTTATCGTCCTCAACAACTTCAAAAGCAA...TCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCTCTTTTGTCTTCTCTTaGTACAGTGCTCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: RIKCSESKGVALLPSRLISFVFS*YSAPVS
Trigger: AGAAACGGGAGCACTGTACAAAGAGAAGACAAAAGA...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp GGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCACCTCCGGCTTATCAGCAGTaGTATAGACAGATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GTRFLDLLLVALTEEHPPPAYQQ*YRQIRK
Trigger: TTTTCTGATCTGTCTATACAACTGCTGATAAGCCGG...AGGTGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACTCATTTTCTTCCAGTaGCTGCTGCCATTCCACCCT +
Preference number: 5 (lower is better)
Translates to: FTESKGSATWSSSEVQIQLIFFQ*LLPFHP
Trigger: AGGGTGGAATGGCAGCAGCAACTGGAAGAAAATGAG...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGTGGCCCAAAATTAATTaGCCCAGCCACTGCACCAAA +
Preference number: 5 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLWPKIN*PSHCTK
Trigger: TTTGGTGCAGTGGCTGGGCAAATTAATTTTGGGCCA...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTAGAATATGGTCTACTCTaGTCTTCCCTGCACAGATTA +
Preference number: 5 (lower is better)
Translates to: SESNAQNQKVWHSCPAGLEYGLL*SSLHRL
Trigger: TAATCTGTGCAGGGAAGACAAGAGTAGACCATATTC...TAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp ATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGAACAGTTTCCAGAGTTaGAACATTCAGCACAATCAA +
Preference number: 5 (lower is better)
Translates to: MLRIKRCGTPAQPAYQQLNSFQS*NIQHNQ
Trigger: TTGATTGTGCTGAATGTTCAAACTCTGGAAACTGTT...CAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGATTTATAGCAAACTCCTaGCCAAGAAGACCACTGAGG +
Preference number: 5 (lower is better)
Translates to: KANSTGEAKIRAAVWKLRFIANS*PRRPLR
Trigger: CCTCAGTGGTCTTCTTGGCAAGGAGTTTGCTATAAA...TCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS TCA 90 bp TCTGCTAAAAACTCACTAGCCAAAGGAAGACTTTCCCATTACTTGTaGACACTGGGGTGTACAATCTCACTCTACTCCACAGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SAKNSLAKGRLSHYL*TLGCTISLYSTAGF
Trigger: GAAGCCAGCTGTGGAGTAGAGTGAGATTGTACACCCCAGTGTTCACAAGTAATGGGAAAGTCTTCCTTTGGCTAGTGAGTTTTTAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430075.5
CDS-3UTR CAA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCATCAACCTCCAGGTTGTaGACCCATGAAATAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GHELYLLSTSRLLTHEIASTSRL*THEIAG
Trigger: TCCTGCTATTTCATGGGTCAACAACCTGGAGGTTGA...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTACTATCAACCTCCAGGTaGTTGACCCATGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALLSTSR*LTHEIA
Trigger: TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAG...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAAATACTCTACCACATCTaGATCATGGGGCAGTTCACC +
Preference number: 5 (lower is better)
Translates to: FTESKGSATWSSSEVQIQILYHI*IMGQFT
Trigger: GGTGAACTGCCCCATGATCAAGATGTGGTAGAGTAT...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATAAGCAGCAGTCTTGCCTaGGGAATCCAAGATAGTAAA +
Preference number: 5 (lower is better)
Translates to: SIILGLVLSALNGQFHAISSSLA*GIQDSK
Trigger: TTTACTATCTTGGATTCCCAAGGCAAGACTGCTGCT...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCATTCTTGGATCTCCTTTaGGTTGCGCTGACAGAAGAG +
Preference number: 5 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESFLDLL*VALTEE
Trigger: CTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAA...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCCCTTAGCAAAACTATaGTCTGAAGTGAAAGAAATC +
Preference number: 5 (lower is better)
Translates to: EVRIKCSESKGVALLPSRPLAKL*SEVKEI
Trigger: GATTTCTTTCACTTCAGACAATAGTTTTGCTAAGGG...CCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp ACTGGTACTCGATTCTTGGATCTCCTTTTGGTTGCGCTGACAGAAGAGCATCCATCCACAAACAGGAACTaGTCAACAACTAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: TGTRFLDLLLVALTEEHPSTNRN*STTSGK
Trigger: TTTCCCACTAGTTGTTGACAAGTTCCTGTTTGTGGA...TGGATGCTCTTCTGTCAGCGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAACACCAAAGCCATTCTaGAGGGAGGGATTTAATTGG +
Preference number: 5 (lower is better)
Translates to: QSFNPKDPVATRVQKSESTPKPF*REGFNW
Trigger: CCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTGT...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp CTAGAAGAATGCTCTTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGACACCAAAGCCATTCTaGAGGGAGGGATTTAATTGG +
Preference number: 5 (lower is better)
Translates to: LEECSLQSPKDQPLGLPLTPKPF*REGFNW
Trigger: CCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTGT...CAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAAGAGCATTCTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAACAGAGCTTTATCCAGTTTCGGCTCTTaGGTCATCGGATTATTACAC +
Preference number: 5 (lower is better)
Translates to: PKDQPLGLPLRYKSNRALSSFGS*VIGLLH
Trigger: GTGTAATAATCCGATGACCAAAGAGCCGAAACTGGA...TAAAGCTCTGTTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCTCCAGTTTCGGCTCTTaGGTCATCGGATTATTACAC +
Preference number: 5 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGSSFGS*VIGLLH
Trigger: GTGTAATAATCCGATGACCAAAGAGCCGAAACTGGA...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCGAGGACCTTCTCGGCTaGGTTCTTTTGTCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: HQSTEVRIKCSESKGVALEDLLG*VLLSSL
Trigger: AAGAGAAGACAAAAGAACCAAGCCGAGAAGGTCCTC...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp ATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGCACCAAACCAGCCTaGACACACAATTGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: IQWPPEYRSQNQMLRIKRCTKPA*THNCWL
Trigger: CAACCAACAATTGTGTGTCAAGGCTGGTTTGGTGCA...CCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp TCTACTCAGGGACTTGGTCCCCACAATCAGATGAAAACTCATTCAGGCAGAGCCTTAAACATAAGAGGCTaGGTAGAAAGACATGGGGAA +
Preference number: 5 (lower is better)
Translates to: STQGLGPHNQMKTHSGRALNIRG*VERHGE
Trigger: TTCCCCATGTCTTTCTACCAAGCCTCTTATGTTTAA...GGCTCTGCCTGAATGAGTTTTCATCTGATTGTGGGGACCAAGTCCCTGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp TGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCCCTCTACTCAATTCATaGACTTCCTGCTTCTACTGC +
Preference number: 5 (lower is better)
Translates to: WPPEYRSQNQMLRIKRCGPLLNS*TSCFYC
Trigger: GCAGTAGAAGCAGGAAGTCAATGAATTGAGTAGAGG...GCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTGAGAGGACCTTTTGCTaGCAAATCCTCAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTERTFC*QILKLL
Trigger: CAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTC...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CAAATACCGACCACAGAGTTTAACCTTCATGGGCTCCTTCTAGGAAGCAGGCAGCGAATAACTGGTTGGTaGGAAAACATGGTACTTGAT +
Preference number: 5 (lower is better)
Translates to: QIPTTEFNLHGLLLGSRQRITGW*ENMVLD
Trigger: ATCAAGTACCATGTTTTCCAACCAACCAGTTATTCG...CTGCCTGCTTCCTAGAAGGAGCCCATGAAGGTTAAACTCTGTGGTCGGTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATATGCAGCCTCCAATATaGCATGATAGTAGGAATAAT +
Preference number: 5 (lower is better)
Translates to: TQERTFCLQILKLLTSGDMQPPI*HDSRNN
Trigger: ATTATTCCTACTATCATGCAATATTGGAGGCTGCAT...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATATTGAACAATAAAGGTTaGGGTCTTTCAGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SIILGLVLSALNGQFHAILNNKG*GLSEAV
Trigger: GACAGCCTCTGAAAGACCCAAACCTTTATTGTTCAA...TATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTGTATCATCCTTGGCCTaGTACTCAGTGCTCTTAATG +
Preference number: 5 (lower is better)
Translates to: PPEYRSQNQMLRIKRCGTVSSLA*YSVLLM
Trigger: CATTAAGAGCACTGAGTACAAGGCCAAGGATGATAC...AGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp ACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCCTATCAACCTCCAGGTaGTTGACCCATGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: TRVQKSESNAQNQKVWHSLSTSR*LTHEIA
Trigger: TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAG...GGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCACTATCAACCTCCAGGTaGTTGACCCATGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: GHELYLLSTSRLLTHEIALSTSR*LTHEIA
Trigger: TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAG...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp AAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCTCAAAGGGCATTCCATaGAACAGCACAACGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KLKCSLQYCMIVGIIGTVSKGIP*NSTTGR
Trigger: TCTGCCCGTTGTGCTGTTCAATGGAATGCCCTTTGA...GACGGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCAGCAGCAGTCTTGCCTaGGGAATCCAAGATAGTAAA +
Preference number: 5 (lower is better)
Translates to: HQSTEVRIKCSESKGVALSSSLA*GIQDSK
Trigger: TTTACTATCTTGGATTCCCAAGGCAAGACTGCTGCT...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCATGATCTGATGATCGCTACAGCAGCAGTCTaGCCTTGGGAATCCAAGATA +
Preference number: 5 (lower is better)
Translates to: PPILHDSRNNRYRHDLMIATAAV*PWESKI
Trigger: TATCTTGGATTCCCAAGGCAAGACTGCTGCTGTAGC...GATCATCAGATCATGACGGTACCGATTATTCCTACTATCATGCAATATTGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGGGAGAGCTGCCCAGATaGCTCTGGAGATCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALGELPR*LWRSEC
Trigger: ACACTCAGATCTCCAGAGCAATCTGGGCAGCTCTCC...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGGTTGGAAGTCTGAGTTaGGAGAGCTGCCCAGATTGC +
Preference number: 5 (lower is better)
Translates to: ESIPKMLFTSTYGYFFSRVGSLS*ESCPDC
Trigger: GCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAAC...CCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATGTCAGAAAGTTTGGATaGGCAGTTCATAAATACTCT +
Preference number: 5 (lower is better)
Translates to: QNQMLRIKRCGTPAQPAYVRKFG*AVHKYS
Trigger: AGAGTATTTATGAACTGCCAATCCAAACTTTCTGAC...ATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCCTGTAAAGCCCCATTaGAAGGAATCCCAAAATCCA +
Preference number: 5 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMPVKPH*KESQNP
Trigger: TGGATTTTGGGATTCCTTCAAATGGGGCTTTACAGG...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCTATGTCATCTTTATCTaGCTTCACTTCCTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: RIKCSESKGVALLPSRLIYVIFI*LHFLSL
Trigger: AAGACTGAGGAAGTGAAGCAAGATAAAGATGACATA...GATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATTTCACAGGAGTCTaGGTATTCTTCAGCACGGAT +
Preference number: 5 (lower is better)
Translates to: QSFNPKDPVATRVQKSESNFTGV*VFFSTD
Trigger: ATCCGTGCTGAAGAATACCAAGACTCCTGTGAAATT...TGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp ACTCAGGAGAGGACCTTTTGCTTGCAAATCCTCAAACTCCTGACCTCGGGTGATAGCCTTGACACACAATaGTTGGTTGGATTTCAATTA +
Preference number: 5 (lower is better)
Translates to: TQERTFCLQILKLLTSGDSLDTQ*LVGFQL
Trigger: TAATTGAAATCCAACCAACAATTGTGTGTCAAGGCT...ATCACCCGAGGTCAGGAGTTTGAGGATTTGCAAGCAAAAGGTCCTCTCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTGCCAAGGTCACACCATaGTACTCCACCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: NLYPLGISGIYPEISITTAKVTP*YSTLGN
Trigger: GTTGCCCAGGGTGGAGTACAATGGTGTGACCTTGGC...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCTGCTTTCTGCTGTTGTaGTTAAGAGACGTTATGCCC +
Preference number: 5 (lower is better)
Translates to: HQSTEVRIKCSESKGVALCFLLL*LRDVMP
Trigger: GGGCATAACGTCTCTTAACAACAACAGCAGAAAGCA...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AGAATCAAAAGGTGTGGCACTCCTGCCCAGCCGGCTTATCAGCAGTTGTATAGATTTTGCTTTCTGCTGTaGTTGTTAAGAGACGTTATG +
Preference number: 5 (lower is better)
Translates to: RIKRCGTPAQPAYQQLYRFCFLL*LLRDVM
Trigger: CATAACGTCTCTTAACAACAACAGCAGAAAGCAAAA...TCTATACAACTGCTGATAAGCCGGCTGGGCAGGAGTGCCACACCTTTTGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCATTGAACAATAAAGGTTaGGGTCTTTCAGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESLNNKG*GLSEAV
Trigger: GACAGCCTCTGAAAGACCCAAACCTTTATTGTTCAA...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AGCAGAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCGTTGGAAGTCTGAGTTaGGAGAGCTGCCCAGATTGC +
Preference number: 5 (lower is better)
Translates to: SRINPQNAIHFYIRIFLLVGSLS*ESCPDC
Trigger: GCAATCTGGGCAGCTCTCCAAACTCAGACTTCCAAC...GAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CATCAACTCTGCTGTGGTCTCATGTGCAGGATCAACTATGAAAACCATATTATGACTGGTACTCGATTCTaGGATCTCCTTTTGGTTGCG +
Preference number: 5 (lower is better)
Translates to: HQLCCGLMCRINYENHIMTGTRF*DLLLVA
Trigger: CGCAACCAAAAGGAGATCCAAGAATCGAGTACCAGT...CATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp AGGTACAAATCCAACAGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACGGCATGTCAGAAAGTTaGGATTGGCAGTTCATAAAT +
Preference number: 5 (lower is better)
Translates to: RYKSNRALIPKIQWPPEYGMSES*DWQFIN
Trigger: ATTTATGAACTGCCAATCCAAACTTTCTGACATGCC...GTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCTGTTGGATTTGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTGCGGAGCACCATCCAAATaGAAATCTCTTAACTCTTTC +
Preference number: 5 (lower is better)
Translates to: KQAKYVRKGWCTLEDRACGAPSK*KSLNSF
Trigger: GAAAGAGTTAAGAGATTTCAATTTGGATGGTGCTCC...GCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCACCGGCTTATCAGCAGTaGTATAGACAGATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: QRSSGHQSTEVRIKCSESPAYQQ*YRQIRK
Trigger: TTTTCTGATCTGTCTATACAACTGCTGATAAGCCGG...TGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000418197.1
CDS-3UTR CAA 90 bp CAAGTCGCTTGCCACATCTTCTTCTACCCGAAGCTGTTGAATATGAGATTTTATGTATCATCCTTGGCCTaGTACTCAGTGCTCTTAATG +
Preference number: 5 (lower is better)
Translates to: QVACHIFFYPKLLNMRFYVSSLA*YSVLLM
Trigger: CATTAAGAGCACTGAGTACAAGGCCAAGGATGATAC...ATAAAATCTCATATTCAACAGCTTCGGGTAGAAGAAGATGTGGCAAGCGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp AGCATCAGGGGGAGAATCAGTGCCATCGTGGCTGTAAATTCTATAAATATCTTCGAGGTGGAAATCGTCTaGATTAAAGAGCTCACTATC +
Preference number: 5 (lower is better)
Translates to: SIRGRISAIVAVNSINIFEVEIV*IKELTI
Trigger: GATAGTGAGCTCTTTAATCAAGACGATTTCCACCTC...GAAGATATTTATAGAATTTACAGCCACGATGGCACTGATTCTCCCCCTGATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp GCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAATGGGCATGTCAGAAAGTTaGGATTGGCAGTTCATAAAT +
Preference number: 5 (lower is better)
Translates to: ALIPKIQWPPEYRSQNQMGMSES*DWQFIN
Trigger: ATTTATGAACTGCCAATCCAAACTTTCTGACATGCC...CATTTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp GGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCAGGCATGTCAGAAAGTTaGGATTGGCAGTTCATAAAT +
Preference number: 5 (lower is better)
Translates to: GHELYLLSTSRLLTHEIAGMSES*DWQFIN
Trigger: ATTTATGAACTGCCAATCCAAACTTTCTGACATGCC...TGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CACCAGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCATTTTGCTTTTGAAGTaGTTGAGGACGATAACCACC +
Preference number: 5 (lower is better)
Translates to: HQSTEVRIKCSESKGVALILLLK*LRTITT
Trigger: GGTGGTTATCGTCCTCAACAACTTCAAAAGCAAAAT...GAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AAACAGGCAAAATATGTAAGAAAAGGCTGGTGCACGTTGGAAGACAGAGCGTGCTATGTCATCTTTATCTaGCTTCACTTCCTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: KQAKYVRKGWCTLEDRACYVIFI*LHFLSL
Trigger: AAGACTGAGGAAGTGAAGCAAGATAAAGATGACATA...GCACGCTCTGTCTTCCAACGTGCACCAGCCTTTTCTTACATATTTTGCCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CCACGAATAACTGGTTGGTTGGAAAACATGGTACTTGATAATCTTTTGTTGTCACTCATTTTCTTCCAGTaGCTGCTGCCATTCCACCCT +
Preference number: 5 (lower is better)
Translates to: PRITGWLENMVLDNLLLSLIFFQ*LLPFHP
Trigger: AGGGTGGAATGGCAGCAGCAACTGGAAGAAAATGAG...TGACAACAAAAGATTATCAAGTACCATGTTTTCCAACCAACCAGTTATTCGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp TTTACAGAGTCCAAAGGATCAGCCACTTGGTCTTCCTCTGAGGTACAAATCCAAATATATCCCAGTGACTaGAGTATTTGCTATGCAACC +
Preference number: 5 (lower is better)
Translates to: FTESKGSATWSSSEVQIQIYPSD*SICYAT
Trigger: GGTTGCATAGCAAATACTCAAGTCACTGGGATATAT...TTGGATTTGTACCTCAGAGGAAGACCAAGTGGCTGATCCTTTGGACTCTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCGTCAGAAAGTTTGGATaGGCAGTTCATAAATACTCT +
Preference number: 5 (lower is better)
Translates to: RVQKSESNAQNQKVWHSCVRKFG*AVHKYS
Trigger: AGAGTATTTATGAACTGCCAATCCAAACTTTCTGAC...GCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTTCCACAATGACCGGGTaGGCTGAAGTTCCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: NLYPLGISGIYPEISITTSTMTG*AEVPKV
Trigger: TACCTTAGGAACTTCAGCCAACCCGGTCATTGTGGA...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACCTTGCTTTTGAAGTTGTaGAGGACGATAACCACCTCA +
Preference number: 5 (lower is better)
Translates to: QKLKCSLQYCMIVGIIGTLLLKL*RTITTS
Trigger: TGAGGTGGTTATCGTCCTCAACAACTTCAAAAGCAA...GGTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp AATCTGTATCCTCTAGGCATTTCAGGTATATACCCTGAAATATCAATAACCACTACGCTGTTTTTCAGTTaGTTGATGAAGCCACCGGGG +
Preference number: 5 (lower is better)
Translates to: NLYPLGISGIYPEISITTTLFFS*LMKPPG
Trigger: CCCCGGTGGCTTCATCAACAAACTGAAAAACAGCGT...AGTGGTTATTGATATTTCAGGGTATATACCTGAAATGCCTAGAGGATACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AGAGTACAGAAGTCAGAATCAAATGCTCAGAATCAAAAGGTGTGGCACTCCTGCCATGACAAGCTTTATTaGATTAACTCCAATCATCCC +
Preference number: 5 (lower is better)
Translates to: RVQKSESNAQNQKVWHSCHDKLY*INSNHP
Trigger: GGGATGATTGGAGTTAATCAAATAAAGCTTGTCATG...GCAGGAGTGCCACACCTTTTGATTCTGAGCATTTGATTCTGACTTCTGTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp AGAGCTTTAATCCCAAAGATCCAGTGGCCACCAGAGTACAGAAGTCAGAATCAAGAAACGTTTACTGTGTaGAGCAGACCTTATTTTCAT +
Preference number: 5 (lower is better)
Translates to: RALIPKIQWPPEYRSQNQETFTV*SRPYFH
Trigger: ATGAAAATAAGGTCTGCTCAACACAGTAAACGTTTC...TTGATTCTGACTTCTGTACTCTGGTGGCCACTGGATCTTTGGGATTAAAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGGTATCATCCTTGGCCTaGTACTCAGTGCTCTTAATG +
Preference number: 5 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALVSSLA*YSVLLM
Trigger: CATTAAGAGCACTGAGTACAAGGCCAAGGATGATAC...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp ATTCATGATATACTCTACCACATCTTGATCATGGGGCAGTTCACCCAAGTACACGTCAGAAAGTTTGGATaGGCAGTTCATAAATACTCT +
Preference number: 5 (lower is better)
Translates to: IHDILYHILIMGQFTQVHVRKFG*AVHKYS
Trigger: AGAGTATTTATGAACTGCCAATCCAAACTTTCTGAC...GTGTACTTGGGTGAACTGCCCCATGATCAAGATGTGGTAGAGTATATCATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376723.7
ENST00000438277.5
CDS-3UTR CAA 90 bp CCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGACACTGACCCCCTTAGCAAAACTATaGTCTGAAGTGAAAGAAATC +
Preference number: 5 (lower is better)
Translates to: PKMLFTSTYGYFFSRTLTPLAKL*SEVKEI
Trigger: GATTTCTTTCACTTCAGACAATAGTTTTGCTAAGGG...GGTCAGTGTCCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp CCTCCAATATTGCATGATAGTAGGAATAATCGGTACCGTCATGATCTGATGATCATTTTGCTTTTGAAGTaGTTGAGGACGATAACCACC +
Preference number: 5 (lower is better)
Translates to: PPILHDSRNNRYRHDLMIILLLK*LRTITT
Trigger: GGTGGTTATCGTCCTCAACAACTTCAAAAGCAAAAT...GATCATCAGATCATGACGGTACCGATTATTCCTACTATCATGCAATATTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp ACAGAAACTGAAATGCAGCCTCCAATATTGCATGATAGTAGGAATAATCGGTACTCTTTTGTCTTCTCTTaGTACAGTGCTCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: TETEMQPPILHDSRNNRYSFVFS*YSAPVS
Trigger: AGAAACGGGAGCACTGTACAAAGAGAAGACAAAAGA...GTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp AATAATCGGTACCGTCATGATCTGATGATCCAATATTTTGACTGGCTTCTACAAAATTTCACAGGAGTCTaGGTATTCTTCAGCACGGAT +
Preference number: 5 (lower is better)
Translates to: NNRYRHDLMIQYFDWLLQNFTGV*VFFSTD
Trigger: ATCCGTGCTGAAGAATACCAAGACTCCTGTGAAATT...TTGTAGAAGCCAGTCAAAATATTGGATCATCAGATCATGACGGTACCGATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGTCCACAAACAGGAACTaGTCAACAACTAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALSTNRN*STTSGK
Trigger: TTTCCCACTAGTTGTTGACAAGTTCCTGTTTGTGGA...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CTTGACACACAATTGTTGGTTGGATTTCAATTAAACAATGCACCTAATGCGTTGCCGGCTTATCAGCAGTaGTATAGACAGATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LDTQLLVGFQLNNAPNALPAYQQ*YRQIRK
Trigger: TTTTCTGATCTGTCTATACAACTGCTGATAAGCCGG...CAACGCATTAGGTGCATTGTTTAATTGAAATCCAACCAACAATTGTGTGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS-3UTR CAA 90 bp CCACGAATAACTGGTTGGTTGGAAAACATGGTACTTGATAATCTTTTGTTGTCAACCACGAATAACTGGTaGGTTGGAAAACATGGTACT +
Preference number: 5 (lower is better)
Translates to: PRITGWLENMVLDNLLLSTTNNW*VGKHGT
Trigger: AGTACCATGTTTTCCAACCAACCAGTTATTCGTGGT...TGACAACAAAAGATTATCAAGTACCATGTTTTCCAACCAACCAGTTATTCGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259253.11
CDS-3UTR CAA 90 bp GAATCAATCCCCAAAATGCTATTCACTTCTACATACGGATATTTCTTCTCCAGGAGCCTTGACACACAATaGTTGGTTGGATTTCAATTA +
Preference number: 5 (lower is better)
Translates to: ESIPKMLFTSTYGYFFSRSLDTQ*LVGFQL
Trigger: TAATTGAAATCCAACCAACAATTGTGTGTCAAGGCT...CCTGGAGAAGAAATATCCGTATGTAGAAGTGAATAGCATTTTGGGGATTGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS-3UTR CAA 90 bp CCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAGTGGTGGAGCACCATCCAAATaGAAATCTCTTAACTCTTTC +
Preference number: 5 (lower is better)
Translates to: PSTSSESLTTKIKPILSGGAPSK*KSLNSF
Trigger: GAAAGAGTTAAGAGATTTCAATTTGGATGGTGCTCC...ACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS TCA 72 bp GGGGCGAGGCGGCAGCGGCAGTGCAGGCTGCGCCAGTaGGAGGCCGACACGCGCCTTTCCCGCGGCTCGACT +
Preference number: 6 (lower is better)
Translates to: GARRQRQCRLRQ*EADTRLSRGST
Trigger: AGTCGAGCCGCGGGAAAGGCGCGTGTCGGCCTCTCACTGGCGCAGCCTGCACTGCCGCTGCCGCCTCGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000430075.5
ENST00000438277.5
CDS GCA 72 bp GCAGCCCATGCCCGGGCCGTGGTCAGTCCGCCACAGTaGCAGAGACAACGCCAGGGCAGGGCGGGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: AAHARAVVSPPQ*QRQRQGRAGRG
Trigger: GCCTCGCCCCGCCCTGCCCTGGCGTTGTCTCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000430075.5
ENST00000438277.5
CDS GCA 72 bp GCGCACCCGCGGCACACGCACCGCTCGCGTCTCCCTTaGAGCCCATGCCCGGGCCGTGGTCAGTCCGCCACA +
Preference number: 6 (lower is better)
Translates to: AHPRHTHRSRLP*SPCPGRGQSAT
Trigger: TGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGTGCGTGTGCCGCGGGTGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS CAA 72 bp AGCGCACCCGCGGCACACGCACCGCTCGCGTCTCCCTaGCAGCCCATGCCCGGGCCGTGGTCAGTCCGCCAC +
Preference number: 6 (lower is better)
Translates to: SAPAAHAPLASP*QPMPGPWSVRH
Trigger: GTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGTGCGTGTGCCGCGGGTGCGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS CAA 90 bp GTCACCGGCAGCGCACCCGCGGCACACGCACCGCTCGCGTCTCCCTaGCAGCCCATGCCCGGGCCGTGGTCAGTCCGCCACAGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: VTGSAPAAHAPLASP*QPMPGPWSVRHSAR
Trigger: TCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGTGCGTGTGCCGCGGGTGCGCTGCCGGTGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS GCA 72 bp CGGCACACGCACCGCTCGCGTCTCCCTTGCAGCCCATaGCCGGGCCGTGGTCAGTCCGCCACAGTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: RHTHRSRLPCSP*PGRGQSATVPE
Trigger: CTCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGTGCGTGTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259253.11
ENST00000376723.7
CDS CCA 72 bp CCGCTCGCGTCTCCCTTGCAGCCCATGCCCGGGCCGTaGTCAGTCCGCCACAGTGCCAGAGACAACGCCAGG +
Preference number: 6 (lower is better)
Translates to: PLASPLQPMPGP*SVRHSARDNAR
Trigger: CCTGGCGTTGTCTCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259253.11
ENST00000376723.7
ENST00000430075.5
ENST00000438277.5
CDS GCA 72 bp TATAGCAAACTCCGCTCGCGTCTCCCTTGCAGCCCATaGCCGGGCCGTGGTCAGTCCGCCACAGTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: YSKLRSRLPCSP*PGRGQSATVPE
Trigger: CTCTGGCACTGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGAGTTTGCTATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430075.5
ENST00000438277.5
CDS GCA 72 bp CTCCCATTTTATAGCAAACTCCGCTCGCGTCTCCCTTaGAGCCCATGCCCGGGCCGTGGTCAGTCCGCCACA +
Preference number: 6 (lower is better)
Translates to: LPFYSKLRSRLP*SPCPGRGQSAT
Trigger: TGTGGCGGACTGACCACGGCCCGGGCATGGGCTGCAAGGGAGACGCGAGCGGAGTTTGCTATAAAATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430075.5
ENST00000438277.5
CDS TCA 72 bp GGTAAACTGAGTCACGGTAGAGGCGGAAGCTCAATGTaGCAGGGGCACAGGGTCGCCTTGTGCCCCAAACCC +
Preference number: 6 (lower is better)
Translates to: GKLSHGRGGSSM*QGHRVALCPKP
Trigger: GGGTTTGGGGCACAAGGCGACCCTGTGCCCCTGTCACATTGAGCTTCCGCCTCTACCGTGACTCAGTTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376723.7
CDS CAA 72 bp GGGACAATCCGCACAGCTGCTTCCAGTTTCGGCTCTTaGGTCATCGGATTATTACACAGAAGCAATATGGTA +
Preference number: 6 (lower is better)
Translates to: GTIRTAASSFGS*VIGLLHRSNMV
Trigger: TACCATATTGCTTCTGTGTAATAATCCGATGACCAAAGAGCCGAAACTGGAAGCAGCTGTGCGGATTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465836.1
CDS CAA 90 bp GCACAACGGGCAGAGGTCCAACTCCAGTCTGCTCATAGTAGCCTCTaGCTTCCTGAAACACAAGTAACCACAAAAACAGTATATTTTTGC +
Preference number: 6 (lower is better)
Translates to: AQRAEVQLQSAHSSL*LPETQVTTKTVYFC
Trigger: GCAAAAATATACTGTTTTTGTGGTTACTTGTGTTTCAGGAAGCAAGAGGCTACTATGAGCAGACTGGAGTTGGACCTCTGCCCGTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488439.1
CDS CAA 72 bp GCAGAGGTCCAACTCCAGTCTGCTCATAGTAGCCTCTaGCTTCCTGAAACACAAGTAACCACAAAAACAGTA +
Preference number: 6 (lower is better)
Translates to: AEVQLQSAHSSL*LPETQVTTKTV
Trigger: TACTGTTTTTGTGGTTACTTGTGTTTCAGGAAGCAAGAGGCTACTATGAGCAGACTGGAGTTGGACCTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488439.1
CDS TCA 72 bp AACTCACTAGCCAAAGGAAGACTTTCCCATTACTTGTaGACACTGGGGTGTACAATCTCACTCTACTCCACA +
Preference number: 6 (lower is better)
Translates to: NSLAKGRLSHYL*TLGCTISLYST
Trigger: TGTGGAGTAGAGTGAGATTGTACACCCCAGTGTTCACAAGTAATGGGAAAGTCTTCCTTTGGCTAGTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430075.5
CDS CCA 72 bp TTCACACCAAAGCCATTCTTGAGGGAGGGATTTAATTaGCACCTGATGAATCATGTTATTGGGCAGATCCTT +
Preference number: 6 (lower is better)
Translates to: FTPKPFLREGFN*HLMNHVIGQIL
Trigger: AAGGATCTGCCCAATAACATGATTCATCAGGTGCCAATTAAATCCCTCCCTCAAGAATGGCTTTGGTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418197.1
CDS CCA 72 bp AAGAATCATCTTTCTTTGTCAGATAGTTCATACTATTaGCTACAGCAGCAGTCTTGCCTTGGGAATCCAAGA +
Preference number: 6 (lower is better)
Translates to: KNHLSLSDSSYY*LQQQSCLGNPR
Trigger: TCTTGGATTCCCAAGGCAAGACTGCTGCTGTAGCCAATAGTATGAACTATCTGACAAAGAAAGATGATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488439.1