RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UGDH (Homo sapiens)

Ensembl gene IDs: ENSG00000109814

Ensembl transcript IDs: ENST00000316423.11, ENST00000501493.6, ENST00000503779.5, ENST00000505698.1, ENST00000506179.5, ENST00000507089.5, ENST00000509391.1, ENST00000510490.1, ENST00000510881.5, ENST00000514106.5, ENST00000515021.5, ENST00000515398.1

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTaGCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCAC +
Preference number: 1 (lower is better)
Translates to: LHNASSTSFNILQIC*PAFPHSIGFCWSIH
Trigger: GTGAATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
3UTR-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGCTGAGCCAGGAGAATaGCGTGAACCTGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGAEPGE*REPGKQ
Trigger: CTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGGAGGCCGAGACGGGTaGTTCACAAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGGGRDG*FTRSGD
Trigger: ATCTCCTGACCTTGTGAACCACCCGTCTCGGCCTCC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR TCA 90 bp ATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCCAAGATCAGCTTCTTTaGTGGCATCATCAATATTGG +
Preference number: 2 (lower is better)
Translates to: MRLAQASIYFRSAARPFPQDQLL*WHHQYW
Trigger: CCAATATTGATGATGCCATCAAAGAAGCTGATCTTG...GGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
3UTR-3UTR GCA 90 bp TCTGCTGCCCGCACTGGAACTGTGCTTTTCTCAGTCACAATTTTGTACCCATTTAATATACTTCAGATCTaGTGCCCGGCCTTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: SAARTGTVLFSVTILYPFNILQI*CPAFPH
Trigger: ATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATT...AAATGGGTACAAAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
3UTR-3UTR GCA 90 bp GCGACGGATACTTTCTGCTGCCCGCACTGGAACTGTGCTTTTCTCAGTCACAATTACCCATTTGAGTTTTaGACAATGCGTCTAGCACAA +
Preference number: 2 (lower is better)
Translates to: ATDTFCCPHWNCAFLSHNYPFEF*TMRLAQ
Trigger: TTGTGCTAGACGCATTGTGCAAAACTCAAATGGGTA...ATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510881.5
3UTR-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGCTGAGCCAGGAGAATaGCGTGAACCTGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVAEPGE*REPGKQ
Trigger: CTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGGAGGCCGAGACGGGTaGTTCACAAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVGGRDG*FTRSGD
Trigger: ATCTCCTGACCTTGTGAACCACCCGTCTCGGCCTCC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGTAATCCCAGCACTTTaGGAGGCCGAGACGGGTGGT +
Preference number: 2 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVVIPAL*EAETGG
Trigger: ACCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTAC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGAAAACACTTGGTTCATaGGCCAGGCGTGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVKTLGS*ARRGGS
Trigger: TGAGCCACCACGCCTGGCCCATGAACCAAGTGTTTT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR TCA 90 bp CAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGCAAGATCAGCTTCTTTaGTGGCATCATCAATATTGG +
Preference number: 2 (lower is better)
Translates to: QYTSDLLPGLSPFHRFLLQDQLL*WHHQYW
Trigger: CCAATATTGATGATGCCATCAAAGAAGCTGATCTTG...CAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
3UTR-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTCCTGGCTCACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVSWLTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTGAGCCAGGA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGAATAACCAGGAGGAATaGAGACTGTCCTTCCCTTTA +
Preference number: 2 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGNNQEE*RLSFPL
Trigger: TAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTTCCTTAAAAACACTTaGTTCATGGGCCAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVFLKNT*FMGQAW
Trigger: CCACGCCTGGCCCATGAACCAAGTGTTTTTAAGGAA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
3UTR-3UTR CAA 90 bp TTTTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCATTCCATAGGTTTTaGTTGGAGTATTCACAGAAA +
Preference number: 3 (lower is better)
Translates to: FCTMRLAQASIYFRSAARPFHRF*LEYSQK
Trigger: TTTCTGTGAATACTCCAACAAAAACCTATGGAATGG...CCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGCGCCCCGCTCGATCTaGGCTCCCTCTCGGCGCACG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEAPRSI*APSRRT
Trigger: CGTGCGCCGAGAGGGAGCTCAGATCGAGCGGGGCGC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000507089.5
CDS-3UTR TCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGCGCCCCGCTCGATCTaGGCTCCCTCTCGGCGCACG +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSAPRSI*APSRRT
Trigger: CGTGCGCCGAGAGGGAGCTCAGATCGAGCGGGGCGC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGACAGCACACAGGGCCTaGACAGCTCTCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSETAHRA*TALWPS
Trigger: AGAGGGCCAGAGAGCTGTGCAGGCCCTGTGTGCTGT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTACAGCACACAGGGCCTaGACAGCTCTCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSTAHRA*TALWPS
Trigger: AGAGGGCCAGAGAGCTGTGCAGGCCCTGTGTGCTGT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGCCTGCACAGCTCTCTaGCCCTCTGGAGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEACTAL*PSGVSS
Trigger: GGATGAAACTCCAGAGGGCCAGAGAGCTGTGCAGGC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGCTGAGCCAGGAGAATaGCGTGAACCTGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEAEPGE*REPGKQ
Trigger: CTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp TATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGGCGCCCCGCTCGATCTaGGCTCCCTCTCGGCGCACG +
Preference number: 4 (lower is better)
Translates to: YTSDLLPGLSPFHRFLLEAPRSI*APSRRT
Trigger: CGTGCGCCGAGAGGGAGCTCAGATCGAGCGGGGCGC...CTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503779.5
CDS-3UTR TCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGCCAGGAGAATGGCGTaGACCTGGGAAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSARRMA*TWEAEL
Trigger: AAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGCGACGGATACTTTCTaGTGCCCGCACTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEATDTF*CPHWNC
Trigger: ACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp TCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCGAGGCAAAGGCCGCGTaGGCTCCGCGTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSTSFNILQICCPAFPHSEAKAA*APRLPG
Trigger: GCCTGGCAGACGCGGAGCGCACGCGGCCTTTGCCTC...GGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510881.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGCTGAGCCAGGAGAATaGCGTGAACCTGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSAEPGE*REPGKQ
Trigger: CTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGTAATCCCAGCACTTTaGGAGGCCGAGACGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSVIPAL*EAETGG
Trigger: ACCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTAC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGGTTCTTTAGGTCCTTaGTGGCTGTTCCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEGSLGP*WLFPLP
Trigger: TGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGATACTTCAGATCTGCTaGCCGGCCTTTCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEILQIC*PAFPHS
Trigger: GGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTAT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGACGGATACTTTCTGCTaGCCGCACTGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSETDTFC*PHWNCA
Trigger: AGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGCGACGGATACTTTCTaGTGCCCGCACTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSATDTF*CPHWNC
Trigger: ACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGACGAGCCGGGACACTTaGTCATCCTCTGAAACACCT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSETSRDT*SSSETP
Trigger: AGGTGTTTCAGAGGATGACCAAGTGTCCCGGCTCGT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGGCTCACTGTGTCTTTaGGGTCTGTCGATAGACAGC +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSGSLCL*GLSIDS
Trigger: GCTGTCTATCGACAGACCTCAAAGACACAGTGAGCC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506179.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTACGGATACTTTCTGCTaGCCGCACTGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSTDTFC*PHWNCA
Trigger: AGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTCTCTGGGAACCCAGTaGTCATATACAGCACACAGG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSESLGTQ*SYTAHR
Trigger: CCTGTGTGCTGTATATGAGCACTGGGTTCCCAGAGA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTAGCTCTCTGGCCCTCTaGAGTTTCATCCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSSSLAL*SFIPSN
Trigger: ATTGGAGGGGATGAAACTCCAGAGGGCCAGAGAGCT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTACGAGCCGGGACACTTaGTCATCCTCTGAAACACCT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSTSRDT*SSSETP
Trigger: AGGTGTTTCAGAGGATGACCAAGTGTCCCGGCTCGT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGATGGATCCTTGGAAATaGTCACGAGCCGGGACACTT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEMDPWK*SRAGTL
Trigger: AAGTGTCCCGGCTCGTGACCATTTCCAAGGATCCAT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCTTCATATGGATCCTTaGAAATGGTCACGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSELHMDP*KWSRAG
Trigger: CCCGGCTCGTGACCATTTCCAAGGATCCATATGAAG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGTTTGTAGTTCATTGTaGAGCCCATCCAGGACACGC +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEVCSSL*SPSRTR
Trigger: GCGTGTCCTGGATGGGCTCCACAATGAACTACAAAC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGCGCCCCGCTCGATCTaGGCTCCCTCTCGGCGCACG +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGAPRSI*APSRRT
Trigger: CGTGCGCCGAGAGGGAGCTCAGATCGAGCGGGGCGC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000501493.6
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCACTTGGTCATCCTCTaGAACACCTGGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEHLVIL*NTWMRK
Trigger: CTTTCTCATCCAGGTGTTTCAGAGGATGACCAAGTG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTCCTGGCTCACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSESWLTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTGAGCCAGGA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGAACTGCAAAATTCCTaGAGGATGAGACCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEELQNS*RMRPGM
Trigger: CATCCCAGGTCTCATCCTTCAGGAATTTTGCAGTTC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTCCTCCAACATAGCCTaGACCGATGCAACAGATCTT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSESSNIA*TDATDL
Trigger: AAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTTTCTGCTGCCCGCACTaGAACTGTGCTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSFCCPH*NCAFLS
Trigger: ACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAA...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCTTCATATGGATCCTTaGAAATGGTCACGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSLHMDP*KWSRAG
Trigger: CCCGGCTCGTGACCATTTCCAAGGATCCATATGAAG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGTTTGTAGTTCATTGTaGAGCCCATCCAGGACACGC +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSVCSSL*SPSRTR
Trigger: GCGTGTCCTGGATGGGCTCCACAATGAACTACAAAC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTTCCTTAAAAACACTTaGTTCATGGGCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEFLKNT*FMGQAW
Trigger: CCACGCCTGGCCCATGAACCAAGTGTTTTTAAGGAA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCAACAACCGTTACCCTaGTTTCAGGACACATATGAG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEQQPLP*FQDTYE
Trigger: CTCATATGTGTCCTGAAATCAGGGTAACGGTTGTTG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCACTTGGTCATCCTCTaGAACACCTGGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSHLVIL*NTWMRK
Trigger: CTTTCTCATCCAGGTGTTTCAGAGGATGACCAAGTG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTAATATACTTCAGATCTaGTGCCCGGCCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSNILQI*CPAFPH
Trigger: ATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCCCGCACTGGAACTGTaGTTTTCTCAGTCACAATTT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEPALEL*FSQSQF
Trigger: AAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGGCAAGAAAAGCATTTaGTGCCAGTTTGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEGKKSI*CQFGKL
Trigger: GAGCTTTCCAAACTGGCAGCAAATGCTTTTCTTGCC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGATGGGCACCATCACATaGTTCATATGGATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEMGTIT*FIWILG
Trigger: TCCAAGGATCCATATGAAGCATGTGATGGTGCCCAT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTTTCCTTAAAAACACTTaGTTCATGGGCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSFLKNT*FMGQAW
Trigger: CCACGCCTGGCCCATGAACCAAGTGTTTTTAAGGAA...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp TGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCACAGAAATAAACCCGCTGCCCTGTCCTaGCCGAGGCAAAGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: CPAFPHSIGFCWSIHRNKPAALS*PRQRPR
Trigger: ACGCGGCCTTTGCCTCGGCCAGGACAGGGCAGCGGG...TTTATTTCTGTGAATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510881.5
CDS-3UTR CCA 90 bp GCGACGGATACTTTCTGCTGCCCGCACTGGAACTGTGCTTTTCTCAGTCACAATTTGTACTGGCGGTCGTaGGTCGAGGAGGGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: ATDTFCCPHWNCAFLSHNLYWRS*VEEGSR
Trigger: TCTTGACCCCTCCTCGACCCACGACCGCCAGTACAA...ATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510881.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGAATAACCAGGAGGAATaGAGACTGTCCTTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSENNQEE*RLSFPL
Trigger: TAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTCTCCCTCTTCTCATTaGACTGCAAAATTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSESPSSH*TAKFLK
Trigger: CTTCAGGAATTTTGCAGTTCAATGAGAAGAGGGAGA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCCCGCACTGGAACTGTaGTTTTCTCAGTCACAATTT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSPALEL*FSQSQF
Trigger: AAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGGCAAGAAAAGCATTTaGTGCCAGTTTGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSGKKSI*CQFGKL
Trigger: GAGCTTTCCAAACTGGCAGCAAATGCTTTTCTTGCC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCATTCCAATCGCTGTTaGTACCTCTTCTACATCAGC +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSHSNRC*YLFYIS
Trigger: GCTGATGTAGAAGAGGTAGCAACAGCGATTGGAATG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTATGGGCACCATCACATaGTTCATATGGATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSMGTIT*FIWILG
Trigger: TCCAAGGATCCATATGAAGCATGTGATGGTGCCCAT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGATAACGAGCTACTTCTaGCAAATTCAGAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEITSYF*QIQSLT
Trigger: TGTGAGGCTCTGAATTTGCCAGAAGTAGCTCGTTAT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCAAATAACAACAGCATaGGCACCATCACATGCTTCA +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEQITTA*APSHAS
Trigger: TGAAGCATGTGATGGTGCCCATGCTGTTGTTATTTG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGATTTCAGGACACATATaGGCAATGACACTACATGTG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEISGHI*AMTLHV
Trigger: CACATGTAGTGTCATTGCTCATATGTGTCCTGAAAT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCAAGATCAGCTTCTTTaGTGGCATCATCAATATTGG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEQDQLL*WHHQYW
Trigger: CCAATATTGATGATGCCATCAAAGAAGCTGATCTTG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTCTGAAACACCTGGATaGGAAAGATCCACAACTATT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSESETPG*ERSTTI
Trigger: AATAGTTGTGGATCTTTCTCATCCAGGTGTTTCAGA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGAAAATTCCTGAAGGATaGGACCTGGGATGTTTAATG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEKIPEG*DLGCLM
Trigger: CATTAAACATCCCAGGTCTCATCCTTCAGGAATTTT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTACCCATTTGAGTTTTaGACAATGCGTCTAGCACAA +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEYPFEF*TMRLAQ
Trigger: TTGTGCTAGACGCATTGTGCAAAACTCAAATGGGTA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTGTTTGCATCAAATATaGGACGGATACTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSECLHQI*DGYFLL
Trigger: CAGCAGAAAGTATCCGTCGCATATTTGATGCAAACA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGTTGGGTTTTGTGTTTaGATCAAATATGCGACGGAT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEVGFCV*IKYATD
Trigger: ATCCGTCGCATATTTGATGCAAACACAAAACCCAAC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTTTCAGAACATCCTTTTaGAAACAGCTCCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSFRTSF*KQLPPN
Trigger: GTTTGGTGGGAGCTGTTTCCAAAAGGATGTTCTGAA...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTATAACGAGCTACTTCTaGCAAATTCAGAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSITSYF*QIQSLT
Trigger: TGTGAGGCTCTGAATTTGCCAGAAGTAGCTCGTTAT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGATCACATGCTTCATATaGATCCTTGGAAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEITCFI*ILGNGH
Trigger: GTGACCATTTCCAAGGATCCATATGAAGCATGTGAT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCCACGCATTGATTCTTaGTTCATTGACATCAACAAC +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSPRIDS*FIDINN
Trigger: GTTGTTGATGTCAATGAATCAAGAATCAATGCGTGG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCAAGATCAGCTTCTTTaGTGGCATCATCAATATTGG +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSQDQLL*WHHQYW
Trigger: CCAATATTGATGATGCCATCAAAGAAGCTGATCTTG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGAATTTTGTACCCATTTaGGTTTTGCACAATGCGTCT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSENFVPI*VLHNAS
Trigger: AGACGCATTGTGCAAAACTCAAATGGGTACAAAATT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTTGTTAGGTGGATCTTaGAGACTAAACTTCGGAATT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSELLGGS*RLNFGI
Trigger: AATTCCGAAGTTTAGTCTTCAAGATCCACCTAACAA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTTACCCATTTGAGTTTTaGACAATGCGTCTAGCACAA +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSYPFEF*TMRLAQ
Trigger: TTGTGCTAGACGCATTGTGCAAAACTCAAATGGGTA...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGTTGGGTTTTGTGTTTaGATCAAATATGCGACGGAT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSVGFCV*IKYATD
Trigger: ATCCGTCGCATATTTGATGCAAACACAAAACCCAAC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCCAATTGTTTCAATCTaGAAGCCAATGGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEPIVSI*KPMVCS
Trigger: ACTACAAACCATTGGCTTCCAGATTGAAACAATTGG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR GCA 90 bp CTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTACGGATACTTTCTGCTaGCCGCACTGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: LQICCPAFPHSIGFCWSITDTFC*PHWNCA
Trigger: AGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGT...AATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510881.5
CDS-3UTR GCA 90 bp TTCTGCTGCCCGCACTGGAACTGTGCTTTTCTCAGTCACAATTTTGTACCCATTGCGACGGATACTTTCTaGTGCCCGCACTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: FCCPHWNCAFLSHNFVPIATDTF*CPHWNC
Trigger: ACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGC...AATGGGTACAAAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510881.5
CDS-3UTR CCA 90 bp CAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCACTTCTGCTGCCCGCACTaGAACTGTGCTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: QICCPAFPHSIGFCWSIHFCCPH*NCAFLS
Trigger: ACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAA...GTGAATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CCA 90 bp TTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCTTCTGCTGCCCGCACTaGAACTGTGCTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LHNASSTSFNILQICCPAFCCPH*NCAFLS
Trigger: ACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAA...GGCCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCCTGTAAATTCAAGTTaGGTTTTGTGTTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSEPVNSS*VLCLHQ
Trigger: TTGATGCAAACACAAAACCCAACTTGAATTTACAGG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCCAATTGTTTCAATCTaGAAGCCAATGGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LGRLSQENGVNLGSRACSPIVSI*KPMVCS
Trigger: ACTACAAACCATTGGCTTCCAGATTGAAACAATTGG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGAGGTTTCTTGTTAGGTaGATCTTGAAGACTAAACTT +
Preference number: 4 (lower is better)
Translates to: GRLSQENGVNLGSRACSERFLVR*ILKTKL
Trigger: AAGTTTAGTCTTCAAGATCCACCTAACAAGAAACCT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR TCA 90 bp ATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCCAACAACCGTTACCCTaGTTTCAGGACACATATGAG +
Preference number: 4 (lower is better)
Translates to: MRLAQASIYFRSAARPFPQQPLP*FQDTYE
Trigger: CTCATATGTGTCCTGAAATCAGGGTAACGGTTGTTG...GGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGCCTGCACAGCTCTCTaGCCCTCTGGAGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGACTAL*PSGVSS
Trigger: GGATGAAACTCCAGAGGGCCAGAGAGCTGTGCAGGC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGATTAGCCAGGCACTGTaGCGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGISQAL*RVPVVP
Trigger: TGGGACTACAGGCACCCGCCACAGTGCCTGGCTAAT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGTAATCCCAGCACTTTaGGAGGCCGAGACGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGVIPAL*EAETGG
Trigger: ACCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTAC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp ACTTTCTGCTGCCCGCACTGGAACTGTGCTTTTCTCAGTCACAATTTTGTACCCTCCTCCAACATAGCCTaGACCGATGCAACAGATCTT +
Preference number: 4 (lower is better)
Translates to: TFCCPHWNCAFLSHNFVPSSNIA*TDATDL
Trigger: AAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGA...GGGTACAAAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR GCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGCGACGGATACTTTCTaGTGCCCGCACTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGATDTF*CPHWNC
Trigger: ACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR TCA 90 bp ATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCACAGACAACAACCGTTACCCTaGTTTCAGGACACATATGAG +
Preference number: 4 (lower is better)
Translates to: ICCPAFPHSIGFCWSIHRQQPLP*FQDTYE
Trigger: CTCATATGTGTCCTGAAATCAGGGTAACGGTTGTTG...TCTGTGAATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGGTTCTTTAGGTCCTTaGTGGCTGTTCCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGGSLGP*WLFPLP
Trigger: TGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGCCAGGAGAATGGCGTaGACCTGGGAAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVARRMA*TWEAEL
Trigger: AAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp CAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGAATATACTTCAGATCTaGTGCCCGGCCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QYTSDLLPGLSPFHRFLLNILQI*CPAFPH
Trigger: ATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATT...CAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR GCA 90 bp TATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGCCCGCACTGGAACTGTaGTTTTCTCAGTCACAATTT +
Preference number: 4 (lower is better)
Translates to: YTSDLLPGLSPFHRFLLEPALEL*FSQSQF
Trigger: AAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGG...CTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR GCA 90 bp CTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCACAGAAACCCGCACTGGAACTGTaGTTTTCTCAGTCACAATTT +
Preference number: 4 (lower is better)
Translates to: LLPGLSPFHRFLLEYSQKPALEL*FSQSQF
Trigger: AAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGG...TTTCTGTGAATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGCCTGCACAGCTCTCTaGCCCTCTGGAGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVACTAL*PSGVSS
Trigger: GGATGAAACTCCAGAGGGCCAGAGAGCTGTGCAGGC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGACGAGCCGGGACACTTaGTCATCCTCTGAAACACCT +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGTSRDT*SSSETP
Trigger: AGGTGTTTCAGAGGATGACCAAGTGTCCCGGCTCGT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGATTAGCCAGGCACTGTaGCGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVISQAL*RVPVVP
Trigger: TGGGACTACAGGCACCCGCCACAGTGCCTGGCTAAT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGAAAACACTTGGTTCATaGGCCAGGCGTGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGKTLGS*ARRGGS
Trigger: TGAGCCACCACGCCTGGCCCATGAACCAAGTGTTTT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp TCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCCAAGATCAGCTTCTTTaGTGGCATCATCAATATTGG +
Preference number: 4 (lower is better)
Translates to: SSTSFNILQICCPAFPHSQDQLL*WHHQYW
Trigger: CCAATATTGATGATGCCATCAAAGAAGCTGATCTTG...GGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR GCA 90 bp GAGTTTTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCAATATACTTCAGATCTaGTGCCCGGCCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: EFCTMRLAQASIYFRSAANILQI*CPAFPH
Trigger: ATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATT...GGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR GCA 90 bp TTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCTACCCATTTGAGTTTTaGACAATGCGTCTAGCACAA +
Preference number: 4 (lower is better)
Translates to: LHNASSTSFNILQICCPAYPFEF*TMRLAQ
Trigger: TTGTGCTAGACGCATTGTGCAAAACTCAAATGGGTA...GGCCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGATGGATCCTTGGAAATaGTCACGAGCCGGGACACTT +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGMDPWK*SRAGTL
Trigger: AAGTGTCCCGGCTCGTGACCATTTCCAAGGATCCAT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGCTTCATATGGATCCTTaGAAATGGTCACGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGLHMDP*KWSRAG
Trigger: CCCGGCTCGTGACCATTTCCAAGGATCCATATGAAG...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGACACATATGAGCAATaGCACTACATGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGDTYEQ*HYMWVL
Trigger: GAGGACCCACATGTAGTGTCATTGCTCATATGTGTC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp TATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGCCACGCATTGATTCTTaGTTCATTGACATCAACAAC +
Preference number: 4 (lower is better)
Translates to: YTSDLLPGLSPFHRFLLEPRIDS*FIDINN
Trigger: GTTGTTGATGTCAATGAATCAAGAATCAATGCGTGG...CTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR TCA 90 bp CTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCAAGATCAGCTTCTTTaGTGGCATCATCAATATTGG +
Preference number: 4 (lower is better)
Translates to: LQICCPAFPHSIGFCWSIQDQLL*WHHQYW
Trigger: CCAATATTGATGATGCCATCAAAGAAGCTGATCTTG...AATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGGTTCTTTAGGTCCTTaGTGGCTGTTCCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVGSLGP*WLFPLP
Trigger: TGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGTCCTGGCTCACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGSWLTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTGAGCCAGGA...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGAATATACTTCAGATCTaGTGCCCGGCCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGNILQI*CPAFPH
Trigger: ATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR GCA 90 bp CTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTTACCCATTTGAGTTTTaGACAATGCGTCTAGCACAA +
Preference number: 4 (lower is better)
Translates to: LQICCPAFPHSIGFCWSIYPFEF*TMRLAQ
Trigger: TTGTGCTAGACGCATTGTGCAAAACTCAAATGGGTA...AATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR GCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGACGGATACTTTCTGCTaGCCGCACTGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVTDTFC*PHWNCA
Trigger: AGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGAGCTCTCTGGCCCTCTaGAGTTTCATCCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVSSLAL*SFIPSN
Trigger: ATTGGAGGGGATGAAACTCCAGAGGGCCAGAGAGCT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGACGAGCCGGGACACTTaGTCATCCTCTGAAACACCT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVTSRDT*SSSETP
Trigger: AGGTGTTTCAGAGGATGACCAAGTGTCCCGGCTCGT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGTTCCTTAAAAACACTTaGTTCATGGGCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGFLKNT*FMGQAW
Trigger: CCACGCCTGGCCCATGAACCAAGTGTTTTTAAGGAA...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGCAACAACCGTTACCCTaGTTTCAGGACACATATGAG +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGQQPLP*FQDTYE
Trigger: CTCATATGTGTCCTGAAATCAGGGTAACGGTTGTTG...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp AGCTTCAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTCCACGCATTGATTCTTaGTTCATTGACATCAACAAC +
Preference number: 4 (lower is better)
Translates to: SFNILQICCPAFPHSIGFPRIDS*FIDINN
Trigger: GTTGTTGATGTCAATGAATCAAGAATCAATGCGTGG...AAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR TCA 90 bp ATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTAATTTTGTACCCATTTaGGTTTTGCACAATGCGTCT +
Preference number: 4 (lower is better)
Translates to: ILQICCPAFPHSIGFCWSNFVPI*VLHNAS
Trigger: AGACGCATTGTGCAAAACTCAAATGGGTACAAAATT...ACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR GCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGCCCGCACTGGAACTGTaGTTTTCTCAGTCACAATTT +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGPALEL*FSQSQF
Trigger: AAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGG...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR GCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTCTCTGGGAACCCAGTaGTCATATACAGCACACAGG +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVSLGTQ*SYTAHR
Trigger: CCTGTGTGCTGTATATGAGCACTGGGTTCCCAGAGA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGATGGGCACCATCACATaGTTCATATGGATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGMGTIT*FIWILG
Trigger: TCCAAGGATCCATATGAAGCATGTGATGGTGCCCAT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTTCTGCTGCCCGCACTaGAACTGTGCTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVFCCPH*NCAFLS
Trigger: ACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGCTTCATATGGATCCTTaGAAATGGTCACGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVLHMDP*KWSRAG
Trigger: CCCGGCTCGTGACCATTTCCAAGGATCCATATGAAG...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGTTTGTAGTTCATTGTaGAGCCCATCCAGGACACGC +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVVCSSL*SPSRTR
Trigger: GCGTGTCCTGGATGGGCTCCACAATGAACTACAAAC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp GAGTTTTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCATTTCAGGACACATATaGGCAATGACACTACATGTG +
Preference number: 4 (lower is better)
Translates to: EFCTMRLAQASIYFRSAAISGHI*AMTLHV
Trigger: CACATGTAGTGTCATTGCTCATATGTGTCCTGAAAT...GGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR TCA 90 bp TTTTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGAATTTTGTACCCATTTaGGTTTTGCACAATGCGTCT +
Preference number: 4 (lower is better)
Translates to: FCTMRLAQASIYFRSAARNFVPI*VLHNAS
Trigger: AGACGCATTGTGCAAAACTCAAATGGGTACAAAATT...CCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGCACTTGGTCATCCTCTaGAACACCTGGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVHLVIL*NTWMRK
Trigger: CTTTCTCATCCAGGTGTTTCAGAGGATGACCAAGTG...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGAACTGCAAAATTCCTaGAGGATGAGACCTGGGATG +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVELQNS*RMRPGM
Trigger: CATCCCAGGTCTCATCCTTCAGGAATTTTGCAGTTC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGTCTCCCTCTTCTCATTaGACTGCAAAATTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGSPSSH*TAKFLK
Trigger: CTTCAGGAATTTTGCAGTTCAATGAGAAGAGGGAGA...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTCCTCCAACATAGCCTaGACCGATGCAACAGATCTT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVSSNIA*TDATDL
Trigger: AAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp TTGTACCCATTTGAGTTTTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCTCCTCCAACATAGCCTaGACCGATGCAACAGATCTT +
Preference number: 4 (lower is better)
Translates to: LYPFEFCTMRLAQASIYFSSNIA*TDATDL
Trigger: AAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGA...GAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAAAACTCAAATGGGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR GCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGAATATACTTCAGATCTaGTGCCCGGCCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVNILQI*CPAFPH
Trigger: ATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGATAACGAGCTACTTCTaGCAAATTCAGAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGITSYF*QIQSLT
Trigger: TGTGAGGCTCTGAATTTGCCAGAAGTAGCTCGTTAT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGCAAATAACAACAGCATaGGCACCATCACATGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGQITTA*APSHAS
Trigger: TGAAGCATGTGATGGTGCCCATGCTGTTGTTATTTG...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGATTTCAGGACACATATaGGCAATGACACTACATGTG +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGISGHI*AMTLHV
Trigger: CACATGTAGTGTCATTGCTCATATGTGTCCTGAAAT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGGCAAGAAAAGCATTTaGTGCCAGTTTGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVGKKSI*CQFGKL
Trigger: GAGCTTTCCAAACTGGCAGCAAATGCTTTTCTTGCC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGCATTCCAATCGCTGTTaGTACCTCTTCTACATCAGC +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVHSNRC*YLFYIS
Trigger: GCTGATGTAGAAGAGGTAGCAACAGCGATTGGAATG...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp TCAGTCACAATTTTGTACCCATTTGAGTTTTGCACAATGCGTCTAGCACAAGCTATTTCAGGACACATATaGGCAATGACACTACATGTG +
Preference number: 4 (lower is better)
Translates to: SVTILYPFEFCTMRLAQAISGHI*AMTLHV
Trigger: CACATGTAGTGTCATTGCTCATATGTGTCCTGAAAT...AGCTTGTGCTAGACGCATTGTGCAAAACTCAAATGGGTACAAAATTGTGACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR TCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGAATTTTGTACCCATTTaGGTTTTGCACAATGCGTCT +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGNFVPI*VLHNAS
Trigger: AGACGCATTGTGCAAAACTCAAATGGGTACAAAATT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGAATAACCAGGAGGAATaGAGACTGTCCTTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVNNQEE*RLSFPL
Trigger: TAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTTCAGAACATCCTTTTaGAAACAGCTCCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVFRTSF*KQLPPN
Trigger: GTTTGGTGGGAGCTGTTTCCAAAAGGATGTTCTGAA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGATAACGAGCTACTTCTaGCAAATTCAGAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVITSYF*QIQSLT
Trigger: TGTGAGGCTCTGAATTTGCCAGAAGTAGCTCGTTAT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CCA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGCCAATTGTTTCAATCTaGAAGCCAATGGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGPIVSI*KPMVCS
Trigger: ACTACAAACCATTGGCTTCCAGATTGAAACAATTGG...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGATTTCAGGACACATATaGGCAATGACACTACATGTG +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVISGHI*AMTLHV
Trigger: CACATGTAGTGTCATTGCTCATATGTGTCCTGAAAT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGCCACGCATTGATTCTTaGTTCATTGACATCAACAAC +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVPRIDS*FIDINN
Trigger: GTTGTTGATGTCAATGAATCAAGAATCAATGCGTGG...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTCTGAAACACCTGGATaGGAAAGATCCACAACTATT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVSETPG*ERSTTI
Trigger: AATAGTTGTGGATCTTTCTCATCCAGGTGTTTCAGA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGAAAATTCCTGAAGGATaGGACCTGGGATGTTTAATG +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVKIPEG*DLGCLM
Trigger: CATTAAACATCCCAGGTCTCATCCTTCAGGAATTTT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR GCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTGTTTGCATCAAATATaGGACGGATACTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVCLHQI*DGYFLL
Trigger: CAGCAGAAAGTATCCGTCGCATATTTGATGCAAACA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR GCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGTTGGGTTTTGTGTTTaGATCAAATATGCGACGGAT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVVGFCV*IKYATD
Trigger: ATCCGTCGCATATTTGATGCAAACACAAAACCCAAC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGATCACATGCTTCATATaGATCCTTGGAAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVITCFI*ILGNGH
Trigger: GTGACCATTTCCAAGGATCCATATGAAGCATGTGAT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR TCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGAATTTTGTACCCATTTaGGTTTTGCACAATGCGTCT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVNFVPI*VLHNAS
Trigger: AGACGCATTGTGCAAAACTCAAATGGGTACAAAATT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CCA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGAGGTTTCTTGTTAGGTaGATCTTGAAGACTAAACTT +
Preference number: 4 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVRFLVR*ILKTKL
Trigger: AAGTTTAGTCTTCAAGATCCACCTAACAAGAAACCT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS CCA 90 bp GCGCGGACACTGGGTGGGTGGTGGGCCGAGGCGACCGGAAGGTCCTaGCCGCCTTTCCGGTCTCCTCAGCACCCTGGAGCGCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: ARTLGGWWAEATGRS*PPFRSPQHPGAPPS
Trigger: CGAGGGCGGCGCTCCAGGGTGCTGAGGAGACCGGAAAGGCGGCCAGGACCTTCCGGTCGCCTCGGCCCACCACCCACCCAGTGTCCGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS GCA 90 bp GCTGCCCTGTCCTGGCCGAGGCAAAGGCCGCGTGCGCTCCGCGTCTaGCAGGCTTTAGGGCTGCGCGGACACTGGGTGGGTGGTGGGCCG +
Preference number: 5 (lower is better)
Translates to: AALSWPRQRPRALRV*QALGLRGHWVGGGP
Trigger: CGGCCCACCACCCACCCAGTGTCCGCGCAGCCCTAAAGCCTGGCAGACGCGGAGCGCACGCGGCCTTTGCCTCGGCCAGGACAGGGCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CCA 90 bp CCGCGTGCGCTCCGCGTCTGCCAGGCTTTAGGGCTGCGCGGACACTaGGTGGGTGGTGGGCCGAGGCGACCGGAAGGTCCTGGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: PRALRVCQALGLRGH*VGGGPRRPEGPGRL
Trigger: AAGGCGGCCAGGACCTTCCGGTCGCCTCGGCCCACCACCCACCCAGTGTCCGCGCAGCCCTAAAGCCTGGCAGACGCGGAGCGCACGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CCA 90 bp CCGCGTCTGCCAGGCTTTAGGGCTGCGCGGACACTGGGTGGGTGGTaGGCCGAGGCGACCGGAAGGTCCTGGCCGCCTTTCCGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PRLPGFRAARTLGGW*AEATGRSWPPFRSP
Trigger: AGGAGACCGGAAAGGCGGCCAGGACCTTCCGGTCGCCTCGGCCCACCACCCACCCAGTGTCCGCGCAGCCCTAAAGCCTGGCAGACGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CCA 90 bp GGTCTCCTCAGCACCCTGGAGCGCCGCCCTCGGGTTTCGGTCTCCTaGATCTGCGGGTCGGTCTCGGCGGGCGGATTACTCCTCGCCCAC +
Preference number: 5 (lower is better)
Translates to: GLLSTLERRPRVSVS*ICGSVSAGGLLLAH
Trigger: GTGGGCGAGGAGTAATCCGCCCGCCGAGACCGACCCGCAGATCCAGGAGACCGAAACCCGAGGGCGGCGCTCCAGGGTGCTGAGGAGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS GCA 90 bp CTCAGCACCCTGGAGCGCCGCCCTCGGGTTTCGGTCTCCTGGATCTaGGGGTCGGTCTCGGCGGGCGGATTACTCCTCGCCCACAACCTC +
Preference number: 5 (lower is better)
Translates to: LSTLERRPRVSVSWI*GSVSAGGLLLAHNL
Trigger: GAGGTTGTGGGCGAGGAGTAATCCGCCCGCCGAGACCGACCCGCAGATCCAGGAGACCGAAACCCGAGGGCGGCGCTCCAGGGTGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS GCA 90 bp GAAGGCGGAGGCTTCATTCCCCCGCAGCCAGGCCCTCCTGGATTCTaGCCTCAGCTGCTTCCTAGCTCCCCCTCCCGCTACACAAGGCCC +
Preference number: 5 (lower is better)
Translates to: EGGGFIPPQPGPPGF*PQLLPSSPSRYTRP
Trigger: GGGCCTTGTGTAGCGGGAGGGGGAGCTAGGAAGCAGCTGAGGGCAGAATCCAGGAGGGCCTGGCTGCGGGGGAATGAAGCCTCCGCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510490.1
CDS CCA 90 bp GGTCAAGAATTGTTGTCTAGCAGCCCTCTCCCCGCTGCCCTGTCCTaGCCGAGGCAAAGGCCGCGTGCGCTCCGCGTCTGCCAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: GQELLSSSPLPAALS*PRQRPRALRVCQAL
Trigger: TAAAGCCTGGCAGACGCGGAGCGCACGCGGCCTTTGCCTCGGCCAGGACAGGGCAGCGGGGAGAGGGCTGCTAGACAACAATTCTTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510881.5
ENST00000515398.1
CDS TCA 90 bp CCTCTCGGCGCACGCCCCTCCCTCAGGCTGCCACGCGTTACACTCTaGGTCCCGGGCCTGAGCCCGTATTTAAAGGCTTTTGCCTGCGAA +
Preference number: 5 (lower is better)
Translates to: PLGARPSLRLPRVTL*VPGLSPYLKAFACE
Trigger: TTCGCAGGCAAAAGCCTTTAAATACGGGCTCAGGCCCGGGACTCAGAGTGTAACGCGTGGCAGCCTGAGGGAGGGGCGTGCGCCGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510490.1
ENST00000515021.5
CDS GCA 90 bp TCCCTGGCGAGAGAGGCGGGACCCCCACGCCCTCCTGGCGCTCTTTaGAGAGATGTTCCTCAGGCCCAATCCGGGATTTGGGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: SLAREAGPPRPPGAL*RDVPQAQSGIWDVC
Trigger: ACAGACATCCCAAATCCCGGATTGGGCCTGAGGAACATCTCTGCAAAGAGCGCCAGGAGGGCGTGGGGGTCCCGCCTCTCTCGCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505698.1
CDS TCA 90 bp GACCCACCGCTTCTGGGAAAGAGGCGCCTCCCGTCAGGAGGATGCTaGGTTCCTCATGACTGGACCAGTGAGTGTCCACTCCCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: DPPLLGKRRLPSGGC*VPHDWTSECPLPGP
Trigger: GGGACCAGGGAGTGGACACTCACTGGTCCAGTCATGAGGAACTCAGCATCCTCCTGACGGGAGGCGCCTCTTTCCCAGAAGCGGTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS GCA 90 bp CGTTACACTCTGAGTCCCGGGCCTGAGCCCGTATTTAAAGGCTTTTaGCTGCGAAGGCGGAGGCTTCATTCCCCCGCAGCCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RYTLSPGPEPVFKGF*LRRRRLHSPAARPS
Trigger: GGAGGGCCTGGCTGCGGGGGAATGAAGCCTCCGCCTTCGCAGGCAAAAGCCTTTAAATACGGGCTCAGGCCCGGGACTCAGAGTGTAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510490.1
ENST00000515021.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTGTAATCCCAGCACTTaGGGAGGCCGAGACGGGTGG +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSECNPST*GGRDGW
Trigger: CCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTACA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS TCA 90 bp GATTGTACGCTTCTGGGAAAGAGGCGCCTCCCGTCAGGAGGATGCTaGGTTCCTCATGACTGGACCAGTGAGTGTCCACTCCCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: DCTLLGKRRLPSGGC*VPHDWTSECPLPGP
Trigger: GGGACCAGGGAGTGGACACTCACTGGTCCAGTCATGAGGAACTCAGCATCCTCCTGACGGGAGGCGCCTCTTTCCCAGAAGCGTACAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505698.1
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGGGTTCTTTAGGTCCTaGATGGCTGTTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEGFFRS*MAVPSA
Trigger: GGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGGGTTCTTTAGGTCCTaGATGGCTGTTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSGFFRS*MAVPSA
Trigger: GGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGCTTCATATGGATCCTaGGAAATGGTCACGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEASYGS*EMVTSR
Trigger: CCGGCTCGTGACCATTTCCAAGGATCCATATGAAGC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGCCAGAAACTCAGGGTaGGACAGCACCTGTAAATTC +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEARNSG*DSTCKF
Trigger: GAATTTACAGGTGCTGTCCAACCCTGAGTTTCTGGC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGCTTCATATGGATCCTaGGAAATGGTCACGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSASYGS*EMVTSR
Trigger: CCGGCTCGTGACCATTTCCAAGGATCCATATGAAGC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGCATTTGCTGCCAGTTaGGAAAGCTCTGAAGACCAA +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEAFAAS*ESSEDQ
Trigger: TTGGTCTTCAGAGCTTTCCAAACTGGCAGCAAATGC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCTACATCAGCTCCTGTaGCTTCACACAGAGCACTTA +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSELHQLL*LHTEHL
Trigger: TAAGTGCTCTGTGTGAAGCAACAGGAGCTGATGTAG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCCATTCCAATCGCTGTaGCTACCTCTTCTACATCAG +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEPFQSL*LPLLHQ
Trigger: CTGATGTAGAAGAGGTAGCAACAGCGATTGGAATGG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGATGGTTTGTAGTTCATaGTGGAGCCCATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEMVCSS*WSPSRT
Trigger: TGTCCTGGATGGGCTCCACAATGAACTACAAACCAT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGCATTTGCTGCCAGTTaGGAAAGCTCTGAAGACCAA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSAFAAS*ESSEDQ
Trigger: TTGGTCTTCAGAGCTTTCCAAACTGGCAGCAAATGC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGGGCAAGAAAAGCATTaGCTGCCAGTTTGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSGQEKH*LPVWKA
Trigger: AGCTTTCCAAACTGGCAGCAAATGCTTTTCTTGCCC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCTACATCAGCTCCTGTaGCTTCACACAGAGCACTTA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSLHQLL*LHTEHL
Trigger: TAAGTGCTCTGTGTGAAGCAACAGGAGCTGATGTAG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCCATTCCAATCGCTGTaGCTACCTCTTCTACATCAG +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSPFQSL*LPLLHQ
Trigger: CTGATGTAGAAGAGGTAGCAACAGCGATTGGAATGG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTATGGTTTGTAGTTCATaGTGGAGCCCATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSMVCSS*WSPSRT
Trigger: TGTCCTGGATGGGCTCCACAATGAACTACAAACCAT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS GCA 90 bp ATCTTTTCTCTGGGAACCCAGTGCTCATATACAGCACACAGGGCCTaGACAGCTCTCTGGCCCTCTGGAGTTTCATCCCCTCCAATCAGT +
Preference number: 5 (lower is better)
Translates to: IFSLGTQCSYTAHRA*TALWPSGVSSPPIS
Trigger: ACTGATTGGAGGGGATGAAACTCCAGAGGGCCAGAGAGCTGTGCAGGCCCTGTGTGCTGTATATGAGCACTGGGTTCCCAGAGAAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCTGGCTTTTAGAAACTaGTTTCCAATTCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSELAFRN*FPILWS
Trigger: GGACCAGAGAATTGGAAACAAGTTTCTAAAAGCCAG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGTCTCCCTCTTCTCATaGAACTGCAAAATTCCTGAA +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEVSLFS*NCKIPE
Trigger: TTCAGGAATTTTGCAGTTCAATGAGAAGAGGGAGAC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS GCA 90 bp GAAGACCAAGTATTAGTGGTGAGGATCTTTTCTCTGGGAACCCAGTaGTCATATACAGCACACAGGGCCTGCACAGCTCTCTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: EDQVLVVRIFSLGTQ*SYTAHRACTALWPS
Trigger: AGAGGGCCAGAGAGCTGTGCAGGCCCTGTGTGCTGTATATGAGCACTGGGTTCCCAGAGAAAAGATCCTCACCACTAATACTTGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGGGAGAATTCCACGCATaGATTCTTGATTCATTGACA +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEGEFHA*ILDSLT
Trigger: TGTCAATGAATCAAGAATCAATGCGTGGAATTCTCC...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCTGGCTTTTAGAAACTaGTTTCCAATTCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSLAFRN*FPILWS
Trigger: GGACCAGAGAATTGGAAACAAGTTTCTAAAAGCCAG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGAAGATCCACAACTATTaGTTCCCTAGGTACTTTTGG +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEKIHNY*FPRYFW
Trigger: CCAAAAGTACCTAGGGAACAAATAGTTGTGGATCTT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGTCTCCCTCTTCTCATaGAACTGCAAAATTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSVSLFS*NCKIPE
Trigger: TTCAGGAATTTTGCAGTTCAATGAGAAGAGGGAGAC...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS TCA 90 bp TTTCATCCCCTCCAATCAGTACTCTGTCTGGGTTCTTTAGGTCCTTaGTGGCTGTTCCCTCTGCCAGAAACTCAGGGTTGGACAGCACCT +
Preference number: 5 (lower is better)
Translates to: FHPLQSVLCLGSLGP*WLFPLPETQGWTAP
Trigger: AGGTGCTGTCCAACCCTGAGTTTCTGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCCAGACAGAGTACTGATTGGAGGGGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS TCA 90 bp TTTCATCCCCTCCAATCAGTACTCTGTCTGGGTTCTTTAGGTCCTTaGTGGCTGTTCCCTCTGCCAGAAACTCAGGGTTGGACAGCACAG +
Preference number: 5 (lower is better)
Translates to: FHPLQSVLCLGSLGP*WLFPLPETQGWTAQ
Trigger: CTGTGCTGTCCAACCCTGAGTTTCTGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCCAGACAGAGTACTGATTGGAGGGGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501493.6
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGTTGATTCTTGATTCATaGACATCAACAACCGTTACC +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSELILDS*TSTTVT
Trigger: GGTAACGGTTGTTGATGTCAATGAATCAAGAATCAA...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCCATTCCATAGGTTTTaGTTGGAGTATTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEPFHRF*LEYSQK
Trigger: TTTCTGTGAATACTCCAACAAAAACCTATGGAATGG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCAATTTTGTACCCATTaGAGTTTTGCACAATGCGTC +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSQFCTH*SFAQCV
Trigger: GACGCATTGTGCAAAACTCAAATGGGTACAAAATTG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGACCTGTAAATTCAAGTaGGGTTTTGTGTTTGCATCA +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSETCKFK*GFVFAS
Trigger: TGATGCAAACACAAAACCCAACTTGAATTTACAGGT...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTAAGATCCACAACTATTaGTTCCCTAGGTACTTTTGG +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSKIHNY*FPRYFW
Trigger: CCAAAAGTACCTAGGGAACAAATAGTTGTGGATCTT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTACACCTTTTTGCCAATaGTTTCAATCTGGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSTPFCQ*FQSGSQ
Trigger: TTGGCTTCCAGATTGAAACAATTGGCAAAAAGGTGT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCATATGGAATTCTCTTaGAAGACACCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: GRLSQENGVNLGSRACSEHMEFS*KTPFCQ
Trigger: TTGGCAAAAAGGTGTCTTCAAAGAGAATTCCATATG...CTCACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCTTGTTAGGTGGATCTaGAAGACTAAACTTCGGAAT +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSLVRWI*KTKLRN
Trigger: ATTCCGAAGTTTAGTCTTCAAGATCCACCTAACAAG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS GCA 90 bp CATGTCCCACTCAGTGCAAATAACAACAGCATGGGCACCATCACATaGTTCATATGGATCCTTGGAAATGGTCACGAGCCGGGACACTTG +
Preference number: 5 (lower is better)
Translates to: HVPLSANNNSMGTIT*FIWILGNGHEPGHL
Trigger: CAAGTGTCCCGGCTCGTGACCATTTCCAAGGATCCATATGAAGCATGTGATGGTGCCCATGCTGTTGTTATTTGCACTGAGTGGGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CCA 90 bp CTCAGTGCAAATAACAACAGCATGGGCACCATCACATGCTTCATATaGATCCTTGGAAATGGTCACGAGCCGGGACACTTGGTCATCCTC +
Preference number: 5 (lower is better)
Translates to: LSANNNSMGTITCFI*ILGNGHEPGHLVIL
Trigger: GAGGATGACCAAGTGTCCCGGCTCGTGACCATTTCCAAGGATCCATATGAAGCATGTGATGGTGCCCATGCTGTTGTTATTTGCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTTTGATTCTTGATTCATaGACATCAACAACCGTTACC +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSLILDS*TSTTVT
Trigger: GGTAACGGTTGTTGATGTCAATGAATCAAGAATCAA...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCCATTCCATAGGTTTTaGTTGGAGTATTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSPFHRF*LEYSQK
Trigger: TTTCTGTGAATACTCCAACAAAAACCTATGGAATGG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTACCTGTAAATTCAAGTaGGGTTTTGTGTTTGCATCA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSTCKFK*GFVFAS
Trigger: TGATGCAAACACAAAACCCAACTTGAATTTACAGGT...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCATATGGAATTCTCTTaGAAGACACCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSHMEFS*KTPFCQ
Trigger: TTGGCAAAAAGGTGTCTTCAAAGAGAATTCCATATG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTCATTTCTTAAGGGATTaGAAGAAACTCAAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: LGRLSQENGVNLGSRACSHFLRD*KKLKGS
Trigger: TGAGCCTTTGAGTTTCTTCAAATCCCTTAAGAAATG...ACTGCAAGCTCTGCTTCCCAGGTTCACGCCATTCTCCTGGCTCAGCCTCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506179.5
CDS-3UTR CAA 90 bp CTTCAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGAGGGGTCAAGAATTGTaGTCTAGCAGCCCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: LQYTSDLLPGLSPFHRFLRGQEL*SSSPLP
Trigger: GGGGAGAGGGCTGCTAGACAACAATTCTTGACCCCT...CAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510881.5
CDS CCA 90 bp TTGCCAATTGTTTCAATCTGGAAGCCAATGGTTTGTAGTTCATTGTaGAGCCCATCCAGGACACGCCGTCCATCGAAGATAAAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: LPIVSIWKPMVCSSL*SPSRTRRPSKIKAG
Trigger: GCCAGCCTTTATCTTCGATGGACGGCGTGTCCTGGATGGGCTCCACAATGAACTACAAACCATTGGCTTCCAGATTGAAACAATTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp GTTTTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGAGGAGGGGTCAAGAATaGTTGTCTAGCAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: VLHNASSTSFNILQICCPRRGQE*LSSSPL
Trigger: GAGAGGGCTGCTAGACAACAATTCTTGACCCCTCCT...CGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510881.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGTGTAATCCCAGCACTTaGGGAGGCCGAGACGGGTGG +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVCNPST*GGRDGW
Trigger: CCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTACA...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS TCA 90 bp ATGGTCACGAGCCGGGACACTTGGTCATCCTCTGAAACACCTGGATaGGAAAGATCCACAACTATTTGTTCCCTAGGTACTTTTGGATCA +
Preference number: 5 (lower is better)
Translates to: MVTSRDTWSSSETPG*ERSTTICSLGTFGS
Trigger: TGATCCAAAAGTACCTAGGGAACAAATAGTTGTGGATCTTTCTCATCCAGGTGTTTCAGAGGATGACCAAGTGTCCCGGCTCGTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGCTTCATATGGATCCTaGGAAATGGTCACGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGASYGS*EMVTSR
Trigger: CCGGCTCGTGACCATTTCCAAGGATCCATATGAAGC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGCCAGAAACTCAGGGTaGGACAGCACCTGTAAATTC +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGARNSG*DSTCKF
Trigger: GAATTTACAGGTGCTGTCCAACCCTGAGTTTCTGGC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGAGGCTCACTGTGTCTTaGAGGTCTGTCGATAGACAG +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGRLTVS*RSVDRQ
Trigger: CTGTCTATCGACAGACCTCAAAGACACAGTGAGCCT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506179.5
CDS GCA 90 bp ACAGCACCTGTAAATTCAAGTTGGGTTTTGTGTTTGCATCAAATATaGGACGGATACTTTCTGCTGCCCGCACTGGAACTGTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TAPVNSSWVLCLHQI*DGYFLLPALELCFS
Trigger: AGAAAAGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGCATATTTGATGCAAACACAAAACCCAACTTGAATTTACAGGTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
ENST00000515021.5
CDS CCA 90 bp GTTGCTTCACACAGAGCACTTATGGAGTTAATGCTGCTTATTCTCTaGGCAAGAAAAGCATTTGCTGCCAGTTTGGAAAGCTCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: VASHRALMELMLLIL*ARKAFAASLESSED
Trigger: GTCTTCAGAGCTTTCCAAACTGGCAGCAAATGCTTTTCTTGCCCAGAGAATAAGCAGCATTAACTCCATAAGTGCTCTGTGTGAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CCA 90 bp TCCAATTCCTTAAACATGTCCCACTCAGTGCAAATAACAACAGCATaGGCACCATCACATGCTTCATATGGATCCTTGGAAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: SNSLNMSHSVQITTA*APSHASYGSLEMVT
Trigger: CGTGACCATTTCCAAGGATCCATATGAAGCATGTGATGGTGCCCATGCTGTTGTTATTTGCACTGAGTGGGACATGTTTAAGGAATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp TTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCCCATTCCATAGGTTTTaGTTGGAGTATTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: LHNASSTSFNILQICCPAPFHRF*LEYSQK
Trigger: TTTCTGTGAATACTCCAACAAAAACCTATGGAATGG...GGCCGGGCAGCAGATCTGAAGTATATTGAAGCTTGTGCTAGACGCATTGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CAA 90 bp CTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCACAGAAACAATTTTGTACCCATTaGAGTTTTGCACAATGCGTC +
Preference number: 5 (lower is better)
Translates to: LLPGLSPFHRFLLEYSQKQFCTH*SFAQCV
Trigger: GACGCATTGTGCAAAACTCAAATGGGTACAAAATTG...TTTCTGTGAATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGGGGCAAGAAAAGCATTaGCTGCCAGTTTGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGGQEKH*LPVWKA
Trigger: AGCTTTCCAAACTGGCAGCAAATGCTTTTCTTGCCC...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGCTACATCAGCTCCTGTaGCTTCACACAGAGCACTTA +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGLHQLL*LHTEHL
Trigger: TAAGTGCTCTGTGTGAAGCAACAGGAGCTGATGTAG...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGCCATTCCAATCGCTGTaGCTACCTCTTCTACATCAG +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGPFQSL*LPLLHQ
Trigger: CTGATGTAGAAGAGGTAGCAACAGCGATTGGAATGG...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGATGGTTTGTAGTTCATaGTGGAGCCCATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGMVCSS*WSPSRT
Trigger: TGTCCTGGATGGGCTCCACAATGAACTACAAACCAT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp ATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTTTGATTCTTGATTCATaGACATCAACAACCGTTACC +
Preference number: 5 (lower is better)
Translates to: ILQICCPAFPHSIGFCWSLILDS*TSTTVT
Trigger: GGTAACGGTTGTTGATGTCAATGAATCAAGAATCAA...ACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CAA 90 bp ATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCACAGATTGATTCTTGATTCATaGACATCAACAACCGTTACC +
Preference number: 5 (lower is better)
Translates to: ICCPAFPHSIGFCWSIHRLILDS*TSTTVT
Trigger: GGTAACGGTTGTTGATGTCAATGAATCAAGAATCAA...TCTGTGAATACTCCAACAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CAA 90 bp CTTTCTGCTGCCCGCACTGGAACTGTGCTTTTCTCAGTCACAATTTTGTACCCACCATTCCATAGGTTTTaGTTGGAGTATTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: LSAARTGTVLFSVTILYPPFHRF*LEYSQK
Trigger: TTTCTGTGAATACTCCAACAAAAACCTATGGAATGG...TGGGTACAAAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CAA 90 bp CTTCAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGCAATTTTGTACCCATTaGAGTTTTGCACAATGCGTC +
Preference number: 5 (lower is better)
Translates to: LQYTSDLLPGLSPFHRFLQFCTH*SFAQCV
Trigger: GACGCATTGTGCAAAACTCAAATGGGTACAAAATTG...CAAAAACCTATGGAATGGGGAAAGGCCGGGCAGCAGATCTGAAGTATATTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS GCA 90 bp ACACATATGAGCAATGACACTACATGTGGGTCCTCCAACATAGCCTaGACCGATGCAACAGATCTTCTTAATTTCAAACATGATTGTACC +
Preference number: 5 (lower is better)
Translates to: THMSNDTTCGSSNIA*TDATDLLNFKHDCT
Trigger: GGTACAATCATGTTTGAAATTAAGAAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGACCCACATGTAGTGTCATTGCTCATATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000503779.5
CDS GCA 90 bp ACACATATGAGCAATGACACTACATGTGGGTCCTCCAACATAGCCTaGACCGATGCAACAGATCTTCTTAATTTCAAACATGATTGTACG +
Preference number: 5 (lower is better)
Translates to: THMSNDTTCGSSNIA*TDATDLLNFKHDCT
Trigger: CGTACAATCATGTTTGAAATTAAGAAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGACCCACATGTAGTGTCATTGCTCATATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505698.1
CDS CCA 90 bp GTAGTCATTCATGTCTATGACCTGCTGCCAATAACGAGCTACTTCTaGCAAATTCAGAGCCTCACAGAGATAAACCAAATTCAGAACATC +
Preference number: 5 (lower is better)
Translates to: VVIHVYDLLPITSYF*QIQSLTEINQIQNI
Trigger: GATGTTCTGAATTTGGTTTATCTCTGTGAGGCTCTGAATTTGCCAGAAGTAGCTCGTTATTGGCAGCAGGTCATAGACATGAATGACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGCATTTGCTGCCAGTTaGGAAAGCTCTGAAGACCAA +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVAFAAS*ESSEDQ
Trigger: TTGGTCTTCAGAGCTTTCCAAACTGGCAGCAAATGC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGGGCAAGAAAAGCATTaGCTGCCAGTTTGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVGQEKH*LPVWKA
Trigger: AGCTTTCCAAACTGGCAGCAAATGCTTTTCTTGCCC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS GCA 90 bp ACACATATGAGCAATGACACTACATGTGGGTCCTCCAACATAGCCTaGACCGATGCAACAGATCTTCTTAATTTCAAACATGATTGTACT +
Preference number: 5 (lower is better)
Translates to: THMSNDTTCGSSNIA*TDATDLLNFKHDCT
Trigger: AGTACAATCATGTTTGAAATTAAGAAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGACCCACATGTAGTGTCATTGCTCATATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506179.5
ENST00000509391.1
ENST00000510490.1
ENST00000510881.5
ENST00000514106.5
CDS GCA 90 bp ACACATATGAGCAATGACACTACATGTGGGTCCTCCAACATAGCCTaGACCGATGCAACAGATCTTCTTAATTTCAAACATGATTGTAGA +
Preference number: 5 (lower is better)
Translates to: THMSNDTTCGSSNIA*TDATDLLNFKHDCR
Trigger: TCTACAATCATGTTTGAAATTAAGAAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGACCCACATGTAGTGTCATTGCTCATATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515021.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGCAATTTTGTACCCATTaGAGTTTTGCACAATGCGTC +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGQFCTH*SFAQCV
Trigger: GACGCATTGTGCAAAACTCAAATGGGTACAAAATTG...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGAAGATCCACAACTATTaGTTCCCTAGGTACTTTTGG +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGKIHNY*FPRYFW
Trigger: CCAAAAGTACCTAGGGAACAAATAGTTGTGGATCTT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp CTGGGATGTTTAATGCAAACTGTACATTCTCAGCAGAGCACAAGTATCAAAGGGACACCTTTTTGCCAATaGTTTCAATCTGGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: LGCLMQTVHSQQSTSIKGTPFCQ*FQSGSQ
Trigger: TTGGCTTCCAGATTGAAACAATTGGCAAAAAGGTGT...CCCTTTGATACTTGTGCTCTGCTGAGAATGTACAGTTTGCATTAAACATCCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS TCA 90 bp TGGCTCATAAATAGGAAGTGTAGGAGAATTCCACGCATTGATTCTTaGTTCATTGACATCAACAACCGTTACCCTGATTTCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: WLINRKCRRIPRIDS*FIDINNRYPDFRTH
Trigger: ATGTGTCCTGAAATCAGGGTAACGGTTGTTGATGTCAATGAATCAAGAATCAATGCGTGGAATTCTCCTACACTTCCTATTTATGAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000505698.1
ENST00000506179.5
ENST00000509391.1
ENST00000514106.5
ENST00000515021.5
CDS TCA 90 bp GTCCTCATAAATAGGAAGTGTAGGAGAATTCCACGCATTGATTCTTaGTTCATTGACATCAACAACCGTTACCCTGATTTCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: VLINRKCRRIPRIDS*FIDINNRYPDFRTH
Trigger: ATGTGTCCTGAAATCAGGGTAACGGTTGTTGATGTCAATGAATCAAGAATCAATGCGTGGAATTCTCCTACACTTCCTATTTATGAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503779.5
ENST00000510881.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGCTGGCTTTTAGAAACTaGTTTCCAATTCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVLAFRN*FPILWS
Trigger: GGACCAGAGAATTGGAAACAAGTTTCTAAAAGCCAG...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGGTCTCCCTCTTCTCATaGAACTGCAAAATTCCTGAA +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVVSLFS*NCKIPE
Trigger: TTCAGGAATTTTGCAGTTCAATGAGAAGAGGGAGAC...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS TCA 90 bp ACTAAACTTCGGAATTTCACCAGAAGGAGCATATGGAATTCTCTTTaGAGACACCTTTTTGCCAATTGTTTCAATCTGGAAGCCAATGGT +
Preference number: 5 (lower is better)
Translates to: TKLRNFTRRSIWNSL*RHLFANCFNLEANG
Trigger: ACCATTGGCTTCCAGATTGAAACAATTGGCAAAAAGGTGTCTTCAAAGAGAATTCCATATGCTCCTTCTGGTGAAATTCCGAAGTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGCAATTTTGTACCCATTaGAGTTTTGCACAATGCGTC +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVQFCTH*SFAQCV
Trigger: GACGCATTGTGCAAAACTCAAATGGGTACAAAATTG...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGCTTGTTAGGTGGATCTaGAAGACTAAACTTCGGAAT +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVLVRWI*KTKLRN
Trigger: ATTCCGAAGTTTAGTCTTCAAGATCCACCTAACAAG...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGACCTGTAAATTCAAGTaGGGTTTTGTGTTTGCATCA +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVTCKFK*GFVFAS
Trigger: TGATGCAAACACAAAACCCAACTTGAATTTACAGGT...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316423.11
ENST00000506179.5
CDS-3UTR CAA 90 bp ACAAACAAACCAATAACCAGGAGGAATGAAGACTGTCCTTCCCTTTATAATGTGCATATGGAATTCTCTTaGAAGACACCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: TNKPITRRNEDCPSLYNVHMEFS*KTPFCQ
Trigger: TTGGCAAAAAGGTGTCTTCAAAGAGAATTCCATATG...CACATTATAAAGGGAAGGACAGTCTTCATTCCTCCTGGTTATTGGTTTGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
CDS TCA 90 bp AAAAATGGCAATCTCTACACTTTAGGTTTCTTGTTAGGTGGATCTTaGAGACTAAACTTCGGAATTTCACCAGAAGGAGCATATGGAATT +
Preference number: 5 (lower is better)
Translates to: KNGNLYTLGFLLGGS*RLNFGISPEGAYGI
Trigger: AATTCCATATGCTCCTTCTGGTGAAATTCCGAAGTTTAGTCTTCAAGATCCACCTAACAAGAAACCTAAAGTGTAGAGATTGCCATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS GCA 72 bp CCCCGCTGCCCTGTCCTGGCCGAGGCAAAGGCCGCGTaGGCTCCGCGTCTGCCAGGCTTTAGGGCTGCGCGG +
Preference number: 6 (lower is better)
Translates to: PRCPVLAEAKAA*APRLPGFRAAR
Trigger: CCGCGCAGCCCTAAAGCCTGGCAGACGCGGAGCGCACGCGGCCTTTGCCTCGGCCAGGACAGGGCAGCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CCA 72 bp TACTGGGAGCATCCCGCCCGGGCGGCGGGGCCAGCCTaGGAGCGGCGCTTACCCACTTCCCAGCAGCAAGCG +
Preference number: 6 (lower is better)
Translates to: YWEHPARAAGPA*ERRLPTSQQQA
Trigger: CGCTTGCTGCTGGGAAGTGGGTAAGCGCCGCTCCCAGGCTGGCCCCGCCGCCCGGGCGGGATGCTCCCAGTA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510490.1
CDS CCA 72 bp CTGCCAGGCTTTAGGGCTGCGCGGACACTGGGTGGGTaGTGGGCCGAGGCGACCGGAAGGTCCTGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: LPGFRAARTLGG*WAEATGRSWPP
Trigger: AGGCGGCCAGGACCTTCCGGTCGCCTCGGCCCACCACCCACCCAGTGTCCGCGCAGCCCTAAAGCCTGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS GCA 72 bp CTGGAGCGCCGCCCTCGGGTTTCGGTCTCCTGGATCTaGGGGTCGGTCTCGGCGGGCGGATTACTCCTCGCC +
Preference number: 6 (lower is better)
Translates to: LERRPRVSVSWI*GSVSAGGLLLA
Trigger: GGCGAGGAGTAATCCGCCCGCCGAGACCGACCCGCAGATCCAGGAGACCGAAACCCGAGGGCGGCGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS GCA 72 bp TCCTGGCCGAGGCAAAGGCCGCGTGCGCTCCGCGTCTaGCAGGCTTTAGGGCTGCGCGGACACTGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: SWPRQRPRALRV*QALGLRGHWVG
Trigger: ACCCACCCAGTGTCCGCGCAGCCCTAAAGCCTGGCAGACGCGGAGCGCACGCGGCCTTTGCCTCGGCCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CCA 72 bp CCAGGCTTTAGGGCTGCGCGGACACTGGGTGGGTGGTaGGCCGAGGCGACCGGAAGGTCCTGGCCGCCTTTC +
Preference number: 6 (lower is better)
Translates to: PGFRAARTLGGW*AEATGRSWPPF
Trigger: GAAAGGCGGCCAGGACCTTCCGGTCGCCTCGGCCCACCACCCACCCAGTGTCCGCGCAGCCCTAAAGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CCA 72 bp CTCCGCGTCTGCCAGGCTTTAGGGCTGCGCGGACACTaGGTGGGTGGTGGGCCGAGGCGACCGGAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LRVCQALGLRGH*VGGGPRRPEGP
Trigger: AGGACCTTCCGGTCGCCTCGGCCCACCACCCACCCAGTGTCCGCGCAGCCCTAAAGCCTGGCAGACGCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CCA 72 bp CATGACTGGACCAGTGAGTGTCCACTCCCTGGTCCCTaGCGAGAGAGGCGGGACCCCCACGCCCTCCTGGCG +
Preference number: 6 (lower is better)
Translates to: HDWTSECPLPGP*RERRDPHALLA
Trigger: CGCCAGGAGGGCGTGGGGGTCCCGCCTCTCTCGCCAGGGACCAGGGAGTGGACACTCACTGGTCCAGTCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505698.1
CDS CCA 72 bp AGCACCCTGGAGCGCCGCCCTCGGGTTTCGGTCTCCTaGATCTGCGGGTCGGTCTCGGCGGGCGGATTACTC +
Preference number: 6 (lower is better)
Translates to: STLERRPRVSVS*ICGSVSAGGLL
Trigger: GAGTAATCCGCCCGCCGAGACCGACCCGCAGATCCAGGAGACCGAAACCCGAGGGCGGCGCTCCAGGGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CAA 72 bp CTGGCTGGCGGTCGTGGGTCGAGGAGGGGTCAAGAATaGTTGTCTAGCAGCCCTCTCCCCGCTGCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: LAGGRGSRRGQE*LSSSPLPAALS
Trigger: GGACAGGGCAGCGGGGAGAGGGCTGCTAGACAACAATTCTTGACCCCTCCTCGACCCACGACCGCCAGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515398.1
CDS CAA 90 bp GTCCCTGGCGAGAGAGGCGGGACCCCCACGCCCTCCTGGCGCTCTTaGCAGAGATGTTCCTCAGGCCCAATCCGGGATTTGGGATGTCTG +
Preference number: 6 (lower is better)
Translates to: VPGERGGTPTPSWRS*QRCSSGPIRDLGCL
Trigger: CAGACATCCCAAATCCCGGATTGGGCCTGAGGAACATCTCTGCAAAGAGCGCCAGGAGGGCGTGGGGGTCCCGCCTCTCTCGCCAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505698.1
CDS CAA 72 bp GAGAGAGGCGGGACCCCCACGCCCTCCTGGCGCTCTTaGCAGAGATGTTCCTCAGGCCCAATCCGGGATTTG +
Preference number: 6 (lower is better)
Translates to: ERGGTPTPSWRS*QRCSSGPIRDL
Trigger: CAAATCCCGGATTGGGCCTGAGGAACATCTCTGCAAAGAGCGCCAGGAGGGCGTGGGGGTCCCGCCTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505698.1
CDS CAA 72 bp TGTACTGGCGGTCGTGGGTCGAGGAGGGGTCAAGAATaGTTGTCTAGCAGCCCTCTCCCCGCTGCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: CTGGRGSRRGQE*LSSSPLPAALS
Trigger: GGACAGGGCAGCGGGGAGAGGGCTGCTAGACAACAATTCTTGACCCCTCCTCGACCCACGACCGCCAGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510881.5
ENST00000514106.5
CDS TCA 72 bp CTTCTGGGAAAGAGGCGCCTCCCGTCAGGAGGATGCTaGGTTCCTCATGACTGGACCAGTGAGTGTCCACTC +
Preference number: 6 (lower is better)
Translates to: LLGKRRLPSGGC*VPHDWTSECPL
Trigger: GAGTGGACACTCACTGGTCCAGTCATGAGGAACTCAGCATCCTCCTGACGGGAGGCGCCTCTTTCCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505698.1
ENST00000515398.1
CDS CCA 72 bp TACAGCACACAGGGCCTGCACAGCTCTCTGGCCCTCTaGAGTTTCATCCCCTCCAATCAGTACTCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: YSTQGLHSSLAL*SFIPSNQYSVW
Trigger: CCAGACAGAGTACTGATTGGAGGGGATGAAACTCCAGAGGGCCAGAGAGCTGTGCAGGCCCTGTGTGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CCA 72 bp TGCTCATATACAGCACACAGGGCCTGCACAGCTCTCTaGCCCTCTGGAGTTTCATCCCCTCCAATCAGTACT +
Preference number: 6 (lower is better)
Translates to: CSYTAHRACTAL*PSGVSSPPIST
Trigger: AGTACTGATTGGAGGGGATGAAACTCCAGAGGGCCAGAGAGCTGTGCAGGCCCTGTGTGCTGTATATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CAA 72 bp ACAGCATGGGCACCATCACATGCTTCATATGGATCCTaGGAAATGGTCACGAGCCGGGACACTTGGTCATCC +
Preference number: 6 (lower is better)
Translates to: TAWAPSHASYGS*EMVTSRDTWSS
Trigger: GGATGACCAAGTGTCCCGGCTCGTGACCATTTCCAAGGATCCATATGAAGCATGTGATGGTGCCCATGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS TCA 72 bp CTCCAATCAGTACTCTGTCTGGGTTCTTTAGGTCCTTaGTGGCTGTTCCCTCTGCCAGAAACTCAGGGTTGG +
Preference number: 6 (lower is better)
Translates to: LQSVLCLGSLGP*WLFPLPETQGW
Trigger: CCAACCCTGAGTTTCTGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCCAGACAGAGTACTGATTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS GCA 72 bp GTATTAGTGGTGAGGATCTTTTCTCTGGGAACCCAGTaGTCATATACAGCACACAGGGCCTGCACAGCTCTC +
Preference number: 6 (lower is better)
Translates to: VLVVRIFSLGTQ*SYTAHRACTAL
Trigger: GAGAGCTGTGCAGGCCCTGTGTGCTGTATATGAGCACTGGGTTCCCAGAGAAAAGATCCTCACCACTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS GCA 72 bp CTCAGTGCAAATAACAACAGCATGGGCACCATCACATaGTTCATATGGATCCTTGGAAATGGTCACGAGCCG +
Preference number: 6 (lower is better)
Translates to: LSANNNSMGTIT*FIWILGNGHEP
Trigger: CGGCTCGTGACCATTTCCAAGGATCCATATGAAGCATGTGATGGTGCCCATGCTGTTGTTATTTGCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CCA 72 bp GTTTCAATCTGGAAGCCAATGGTTTGTAGTTCATTGTaGAGCCCATCCAGGACACGCCGTCCATCGAAGATA +
Preference number: 6 (lower is better)
Translates to: VSIWKPMVCSSL*SPSRTRRPSKI
Trigger: TATCTTCGATGGACGGCGTGTCCTGGATGGGCTCCACAATGAACTACAAACCATTGGCTTCCAGATTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CAA 72 bp ATTGTTTCAATCTGGAAGCCAATGGTTTGTAGTTCATaGTGGAGCCCATCCAGGACACGCCGTCCATCGAAG +
Preference number: 6 (lower is better)
Translates to: IVSIWKPMVCSS*WSPSRTRRPSK
Trigger: CTTCGATGGACGGCGTGTCCTGGATGGGCTCCACAATGAACTACAAACCATTGGCTTCCAGATTGAAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CAA 90 bp CAAATAACAACAGCATGGGCACCATCACATGCTTCATATGGATCCTaGGAAATGGTCACGAGCCGGGACACTTGGTCATCCTCTGAAACA +
Preference number: 6 (lower is better)
Translates to: QITTAWAPSHASYGS*EMVTSRDTWSSSET
Trigger: TGTTTCAGAGGATGACCAAGTGTCCCGGCTCGTGACCATTTCCAAGGATCCATATGAAGCATGTGATGGTGCCCATGCTGTTGTTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CAA 90 bp ACTCAGGGTTGGACAGCACCTGTAAATTCAAGTTGGGTTTTGTGTTaGCATCAAATATGCGACGGATACTTTCTGCTGCCCGCACTGGAA +
Preference number: 6 (lower is better)
Translates to: TQGWTAPVNSSWVLC*HQICDGYFLLPALE
Trigger: TTCCAGTGCGGGCAGCAGAAAGTATCCGTCGCATATTTGATGCAAACACAAAACCCAACTTGAATTTACAGGTGCTGTCCAACCCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
ENST00000515021.5
CDS TCA 72 bp AGCCGGGACACTTGGTCATCCTCTGAAACACCTGGATaGGAAAGATCCACAACTATTTGTTCCCTAGGTACT +
Preference number: 6 (lower is better)
Translates to: SRDTWSSSETPG*ERSTTICSLGT
Trigger: AGTACCTAGGGAACAAATAGTTGTGGATCTTTCTCATCCAGGTGTTTCAGAGGATGACCAAGTGTCCCGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS GCA 72 bp TGTGTTTGCATCAAATATGCGACGGATACTTTCTGCTaGCCGCACTGGAACTGTGCTTTTCTCAGTCACAAT +
Preference number: 6 (lower is better)
Translates to: CVCIKYATDTFC*PHWNCAFLSHN
Trigger: ATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGCATATTTGATGCAAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
ENST00000514106.5
ENST00000515021.5
CDS GCA 72 bp TTTTGTGTTTGCATCAAATATGCGACGGATACTTTCTaGTGCCCGCACTGGAACTGTGCTTTTCTCAGTCAC +
Preference number: 6 (lower is better)
Translates to: FCVCIKYATDTF*CPHWNCAFLSH
Trigger: GTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGCATATTTGATGCAAACACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
ENST00000514106.5
ENST00000515021.5
CDS CCA 72 bp ATCAAATATGCGACGGATACTTTCTGCTGCCCGCACTaGAACTGTGCTTTTCTCAGTCACAATTTTGTACCC +
Preference number: 6 (lower is better)
Translates to: IKYATDTFCCPH*NCAFLSHNFVP
Trigger: GGGTACAAAATTGTGACTGAGAAAAGCACAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGCATATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
ENST00000514106.5
ENST00000515021.5
CDS CAA 72 bp ACTTGTTTCCAATTCTCTGGTCCATTCCAATCGCTGTaGCTACCTCTTCTACATCAGCTCCTGTTGCTTCAC +
Preference number: 6 (lower is better)
Translates to: TCFQFSGPFQSL*LPLLHQLLLLH
Trigger: GTGAAGCAACAGGAGCTGATGTAGAAGAGGTAGCAACAGCGATTGGAATGGACCAGAGAATTGGAAACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS GCA 72 bp GTAAATTCAAGTTGGGTTTTGTGTTTGCATCAAATATaGGACGGATACTTTCTGCTGCCCGCACTGGAACTG +
Preference number: 6 (lower is better)
Translates to: VNSSWVLCLHQI*DGYFLLPALEL
Trigger: CAGTTCCAGTGCGGGCAGCAGAAAGTATCCGTCGCATATTTGATGCAAACACAAAACCCAACTTGAATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
ENST00000515021.5
CDS CAA 72 bp TGGACAGCACCTGTAAATTCAAGTTGGGTTTTGTGTTaGCATCAAATATGCGACGGATACTTTCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: WTAPVNSSWVLC*HQICDGYFLLP
Trigger: GGGCAGCAGAAAGTATCCGTCGCATATTTGATGCAAACACAAAACCCAACTTGAATTTACAGGTGCTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000506179.5
ENST00000507089.5
ENST00000515021.5
CDS GCA 72 bp AGCAATGACACTACATGTGGGTCCTCCAACATAGCCTaGACCGATGCAACAGATCTTCTTAATTTCAAACAT +
Preference number: 6 (lower is better)
Translates to: SNDTTCGSSNIA*TDATDLLNFKH
Trigger: ATGTTTGAAATTAAGAAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGACCCACATGTAGTGTCATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000503779.5
ENST00000505698.1
ENST00000506179.5
ENST00000509391.1
ENST00000510490.1
ENST00000510881.5
ENST00000514106.5
ENST00000515021.5
CDS CCA 72 bp CATGTCTATGACCTGCTGCCAATAACGAGCTACTTCTaGCAAATTCAGAGCCTCACAGAGATAAACCAAATT +
Preference number: 6 (lower is better)
Translates to: HVYDLLPITSYF*QIQSLTEINQI
Trigger: AATTTGGTTTATCTCTGTGAGGCTCTGAATTTGCCAGAAGTAGCTCGTTATTGGCAGCAGGTCATAGACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS CAA 72 bp AGTGTAGGAGAATTCCACGCATTGATTCTTGATTCATaGACATCAACAACCGTTACCCTGATTTCAGGACAC +
Preference number: 6 (lower is better)
Translates to: SVGEFHALILDS*TSTTVTLISGH
Trigger: GTGTCCTGAAATCAGGGTAACGGTTGTTGATGTCAATGAATCAAGAATCAATGCGTGGAATTCTCCTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000503779.5
ENST00000505698.1
ENST00000506179.5
ENST00000509391.1
ENST00000510490.1
ENST00000510881.5
ENST00000514106.5
ENST00000515021.5
CDS CAA 72 bp CAATCTCTACACTTTAGGTTTCTTGTTAGGTGGATCTaGAAGACTAAACTTCGGAATTTCACCAGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: QSLHFRFLVRWI*KTKLRNFTRRS
Trigger: GCTCCTTCTGGTGAAATTCCGAAGTTTAGTCTTCAAGATCCACCTAACAAGAAACCTAAAGTGTAGAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5
CDS TCA 72 bp AATAGGAAGTGTAGGAGAATTCCACGCATTGATTCTTaGTTCATTGACATCAACAACCGTTACCCTGATTTC +
Preference number: 6 (lower is better)
Translates to: NRKCRRIPRIDS*FIDINNRYPDF
Trigger: GAAATCAGGGTAACGGTTGTTGATGTCAATGAATCAAGAATCAATGCGTGGAATTCTCCTACACTTCCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000503779.5
ENST00000505698.1
ENST00000506179.5
ENST00000509391.1
ENST00000510490.1
ENST00000510881.5
ENST00000514106.5
ENST00000515021.5
CDS CCA 72 bp AAATGGCAATCTCTACACTTTAGGTTTCTTGTTAGGTaGATCTTGAAGACTAAACTTCGGAATTTCACCAGA +
Preference number: 6 (lower is better)
Translates to: KWQSLHFRFLVR*ILKTKLRNFTR
Trigger: TCTGGTGAAATTCCGAAGTTTAGTCTTCAAGATCCACCTAACAAGAAACCTAAAGTGTAGAGATTGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316423.11
ENST00000501493.6
ENST00000506179.5
ENST00000507089.5