Pregenerated sensors for UGCG (Homo sapiens)
Ensembl gene IDs: ENSG00000148154Ensembl transcript IDs: ENST00000374279.4, ENST00000474306.1, ENST00000489355.1, ENST00000490110.5, ENST00000495085.1
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATaGTGGGGAGAAAACAGTGAGGTACAGCATGCATTTACAACCAGC | + |
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Preference number: 1 (lower is better) Translates to: VHHKLSTTWRASLAA*WGENSEVQHAFTTS Trigger: GCTGGTTGTAAATGCATGCTGTACCTCACTGTTTTCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR TCA 90 bp | AGGAGCAAGGAAGGAAAAGATTTAGCTATACTAATTACAGCACAGTaGTTAACAATGGTTCAAGACAGAACCAACAAGAGTTGGTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: RSKEGKDLAILITAQ*LTMVQDRTNKSWSK Trigger: TTTTGACCAACTCTTGTTGGTTCTGTCTTGAACCATTGTTAATCACTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTCCTTGCTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGGAAGACGGGGTGGGCTaGGGGAGGAGCAAGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: CYTLCFDMETVVTQNLKLEDGVG*GRSKEG Trigger: TCCTTCCTTGCTCCTCCCCCAGCCCACCCCGTCTTC...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR TCA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGAAGAAACTTTCTCTACTaGAGGATACTGTCACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SPQVKHNLASKFSGMMGRRNFLY*RILSQS Trigger: ACTCTGTGACAGTATCCTTCAGTAGAGAAAGTTTCT...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTCGGCAGTGCAAAGGATaGCATCAACCAAACTTCATT | + |
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Preference number: 2 (lower is better) Translates to: TVLVYIYKTQEVCPAILVRQCKG*HQPNFI Trigger: AATGAAGTTTGGTTGATGCCATCCTTTGCACTGCCG...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTTTCACTGTGCAACTTTCCTCAGGGAATAATACCCATTCACAGAAAGAACAAAGAAAAGGCTTATaGACTGTCCCTTACATTTTT | + |
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Preference number: 2 (lower is better) Translates to: LVFTVQLSSGNNTHSQKEQRKGL*TVPYIF Trigger: AAAAATGTAAGGGACAGTGCATAAGCCTTTTCTTTG...TTCTTTCTGTGAATGGGTATTATTCCCTGAGGAAAGTTGCACAGTGAAAACCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CCA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGATAAAGTGTATCATTTaGCCAAGACTACAGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLIKCII*PRLQMC Trigger: ACACATCTGTAGTCTTGGCCAAATGATACACTTTAT...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR TCA 72 bp | AAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATaGTGGGGAGAAAACAGTGAGGTACAGCATGCATTT | + |
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Preference number: 3 (lower is better) Translates to: KLSTTWRASLAA*WGENSEVQHAF Trigger: AAATGCATGCTGTACCTCACTGTTTTCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR GCA 72 bp | ACATGTAGTGGGTCACAACCAGACTGGTTTTCACTGTaGAACTTTCCTCAGGGAATAATACCCATTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: TCSGSQPDWFSL*NFPQGIIPIHR Trigger: TCTGTGAATGGGTATTATTCCCTGAGGAAAGTTGCACAGTGAAAACCAGTCTGGTTGTGACCCACTACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CAA 90 bp | CTGGTTTTCACTGTGCAACTTTCCTCAGGGAATAATACCCATTCACAGAAAGAAGTACCTCGCCATGTGTaGTTCACTGCACAAAACCAT | + |
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Preference number: 3 (lower is better) Translates to: LVFTVQLSSGNNTHSQKEVPRHV*FTAQNH Trigger: ATGGTTTTGTGCAGTGAACAACACATGGCGAGGTAC...TTCTTTCTGTGAATGGGTATTATTCCCTGAGGAAAGTTGCACAGTGAAAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR CCA 72 bp | GTAATACACAAGATTACGCTTCGGCAGTGCAAAGGATaGCATCAACCAAACTTCATTAAACAGACCAACAAG | + |
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Preference number: 3 (lower is better) Translates to: VIHKITLRQCKG*HQPNFIKQTNK Trigger: CTTGTTGGTCTGTTTAATGAAGTTTGGTTGATGCCATCCTTTGCACTGCCGAAGCGTAATCTTGTGTATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CAA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAACTGTCACAGAGTTTGTaGCAGAGCATCTATATATAT | + |
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Preference number: 3 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQLSQSL*QSIYIY Trigger: ATATATATAGATGCTCTGCAACAAACTCTGTGACAG...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTCAGAACCAACAAGAGTaGGTCAAAAAGATGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: TVLVYIYKTQEVCPAILVQNQQE*VKKMPS Trigger: TGAAGGCATCTTTTTGACCAACTCTTGTTGGTTCTG...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CAA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGAATAAAGTGTATCATTaGGCCAAGACTACAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: CYTLCFDMETVVTQNLKLNKVYH*AKTTDV Trigger: CACATCTGTAGTCTTGGCCAAATGATACACTTTATT...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGAACCAACAAGAGTTGGTCAAAAAGATGCCTTCAATACATGGCTACAATTAACAAAACCATTCACTTaGGACATGAATAGTCATTCC | + |
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Preference number: 3 (lower is better) Translates to: TEPTRVGQKDAFNTWLQLTKPFT*DMNSHS Trigger: GGAATGACTATTCATGTCCAAAGTGAATGGTTTTGT...TAATTGTAGCCATGTATTGAAGGCATCTTTTTGACCAACTCTTGTTGGTTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTTATGCATCCAAGCCTTaGTTCATAAAGAAAATGCCC | + |
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Preference number: 3 (lower is better) Translates to: TVLVYIYKTQEVCPAILVYASKP*FIKKMP Trigger: GGGCATTTTCTTTATGAACAAAGGCTTGGATGCATA...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CAA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCTAGAACCAATTCTCTaGATTCTCTACTTCCACAAA | + |
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Preference number: 3 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLLEPIL*ILYFHK Trigger: TTTGTGGAAGTAGAGAATCAAGAGAATTGGTTCTAG...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTATACTGTCACAGAGTTaGTTGCAGAGCATCTATATA | + |
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Preference number: 3 (lower is better) Translates to: TVLVYIYKTQEVCPAILVILSQS*LQSIYI Trigger: TATATAGATGCTCTGCAACAAACTCTGTGACAGTAT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| 3UTR TCA 72 bp | GAAGGAAAAGATTTAGCTATACTAATTACAGCACAGTaGTTAACAATGGTTCAAGACAGAACCAACAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: EGKDLAILITAQ*LTMVQDRTNKS Trigger: ACTCTTGTTGGTTCTGTCTTGAACCATTGTTAATCACTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR GCA 90 bp | CATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCCACCCGTAAATGGCGGCTGCGGGTGCTaGGGTCTCCCGGCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HSFYYLLNSKAKLLPPVNGGCGC*GLPALV Trigger: GACCAGAGCCGGGAGACCGCAGCACCCGCAGCCGCC...ATTTACGGGTGGCAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR GCA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGAAAAGCCCTGTCTGTCTaGTACGTAAGGCAGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: SPQVKHNLASKFSGMMGRKALSV*YVRQPV Trigger: CACGGGCTGCCTTACGTAGCAGACAGACAGGGCTTT...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGAGCAAGTTTAGCGGCATaGTGGGGAGAAAACAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPQVKHNLASKFSGMMGRASLAA*WGENSE Trigger: CTCACTGTTTTCTCCCCATCATGCCGCTAAACTTGC...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | CTGGTTTTCACTGTGCAACTTTCCTCAGGGAATAATACCCATTCACAGAAAGAAGAAGACGGGGTGGGCTaGGGGAGGAGCAAGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LVFTVQLSSGNNTHSQKEEDGVG*GRSKEG Trigger: TCCTTCCTTGCTCCTCCCCCAGCCCACCCCGTCTTC...TTCTTTCTGTGAATGGGTATTATTCCCTGAGGAAAGTTGCACAGTGAAAACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGAATAAGTCCTCCTGCTTaGTCCAACACATCTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SPQVKHNLASKFSGMMGRISPPA*SNTSFL Trigger: GAGAAAAGATGTGTTGGATCAAGCAGGAGGACTTAT...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGATCTTCGGCAATGTACTaGGCAAAAGCTATAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SPQVKHNLASKFSGMMGRSSAMY*AKAISP Trigger: AGGACTTATAGCTTTTGCTCAGTACATTGCCGAAGA...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | GGCTGGGGGAGGAGCAAGGAAGGAAAAGATTTAGCTATACTAATTACAGCACAGTCATGGATTCGCGGATaGACCAGGCGACTGCATAAT | + |
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Preference number: 4 (lower is better) Translates to: GWGRSKEGKDLAILITAQSWIRG*TRRLHN Trigger: ATTATGCAGTCGCCTGGTTCATCCGCGAATCCATGA...CTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTCCTTGCTCCTCCCCCAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR GCA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGAGACTGGTTTTCACTGTaGAACTTTCCTCAGGGAATA | + |
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Preference number: 4 (lower is better) Translates to: SPQVKHNLASKFSGMMGRDWFSL*NFPQGI Trigger: TATTCCCTGAGGAAAGTTGCACAGTGAAAACCAGTC...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | GGCTGGGGGAGGAGCAAGGAAGGAAAAGATTTAGCTATACTAATTACAGCACAGTCCCATCTGAACACATaGTGGGCTGCCCATCCAATA | + |
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Preference number: 4 (lower is better) Translates to: GWGRSKEGKDLAILITAQSHLNT*WAAHPI Trigger: TATTGGATGGGCAGCCCACCATGTGTTCAGATGGGA...CTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTCCTTGCTCCTCCCCCAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGAGTCAGTAAGCGTATCTaGAATTACTCTTATTCCACT | + |
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Preference number: 4 (lower is better) Translates to: SPQVKHNLASKFSGMMGRVSKRI*NYSYST Trigger: AGTGGAATAAGAGTAATTCCAGATACGCTTACTGAC...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | GGCTGGGGGAGGAGCAAGGAAGGAAAAGATTTAGCTATACTAATTACAGCACAGGTAGTTTGGTCCACCTaGTCATTCTGGATTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: GWGRSKEGKDLAILITAQVVWST*SFWIET Trigger: AGTTTCAATCCAGAATGATCAGGTGGACCAAACTAC...CTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTCCTTGCTCCTCCCCCAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAACAGTTGCCTTCTTGTTaGGGTGTAATCGGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQQLPSC*GVIGCR Trigger: TCTACACCCGATTACACCTCAACAAGAAGGCAACTG...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR GCA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAAAACTTGAGTGGACATTaGAAACCTCCAACCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQNLSGH*KPPTSV Trigger: GACCGAGGTTGGAGGTTTGCAATGTCCACTCAAGTT...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | GGCTGGGGGAGGAGCAAGGAAGGAAAAGATTTAGCTATACTAATTACAGCACAGTCTGTCCAGCCATTTTaGTTTTGTTGTTACACTGTC | + |
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Preference number: 4 (lower is better) Translates to: GWGRSKEGKDLAILITAQSVQPF*FCCYTV Trigger: GACAGTGTAACAACAAAACCAAAATGGCTGGACAGA...CTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTCCTTGCTCCTCCCCCAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | CTGGTTTTCACTGTGCAACTTTCCTCAGGGAATAATACCCATTCACAGAAAGAAATGGCTGGATCATCATaGTCTTGTACACAAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LVFTVQLSSGNNTHSQKEMAGSS*SCTQRS Trigger: GCTCCTTTGTGTACAAGATCATGATGATCCAGCCAT...TTCTTTCTGTGAATGGGTATTATTCCCTGAGGAAAGTTGCACAGTGAAAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | CATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCCACCCGTAAATCACCCTGGACACCCCTaGGTTGAATGTAGTCAAATA | + |
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Preference number: 4 (lower is better) Translates to: HSFYYLLNSKAKLLPPVNHPGHP*VECSQI Trigger: TATTTGACTACATTCAACTCAGGGGTGTCCAGGGTG...ATTTACGGGTGGCAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAAGCATTGCAACTTGAGTaGACATTGCAAACCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQALQLE*TLQTSN Trigger: GTTGGAGGTTTGCAATGTCCACTCAAGTTGCAATGC...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAATTCCTGTCACACATTTaGAACCAGTTACATTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQFLSHI*NQLHWQ Trigger: CTGCCAATGTAACTGGTTTCAAATGTGTGACAGGAA...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAATTTTGCATTGCAACTTaGGTGGACATTGCAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQFCIAT*VDIANL Trigger: GAGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAA...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAACAAGTACAAACATGGTaGGCAAAGTTCAACTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQQVQTW*AKFNSG Trigger: ACCTGAGTTGAACTTTGCTCACCATGTTTGTACTTG...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCAGAAGAGAGACACCTaGGAGCTTGCTATAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLQKRDT*ELAIRL Trigger: CAGCCTTATAGCAAGCTCCCAGGTGTCTCTCTTCTG...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | CATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCCACCCGTAAATATCTACCCCTTTCAGTaGTTTCAGAAGAGAGACACC | + |
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Preference number: 4 (lower is better) Translates to: HSFYYLLNSKAKLLPPVNIYPFQ*FQKRDT Trigger: GGTGTCTCTCTTCTGAAACCACTGAAAGGGGTAGAT...ATTTACGGGTGGCAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | GGCTGGGGGAGGAGCAAGGAAGGAAAAGATTTAGCTATACTAATTACAGCACAGGGAGCACTTCATATTTaGGATAATCCAATTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GWGRSKEGKDLAILITAQGALHI*DNPIQR Trigger: TCTTTGAATTGGATTATCCCAAATATGAAGTGCTCC...CTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTCCTTGCTCCTCCCCCAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTATACCTGCTCTAAGGTaGCAGCAAAGCCCTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVIPALR*QQSPVC Trigger: ACAGACAGGGCTTTGCTGCCACCTTAGAGCAGGTAT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR CCA 90 bp | CATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCCACCCGTAAATCATCTGAACACATGGTaGGCTGCCCATCCAATAATT | + |
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Preference number: 4 (lower is better) Translates to: HSFYYLLNSKAKLLPPVNHLNTW*AAHPII Trigger: AATTATTGGATGGGCAGCCCACCATGTGTTCAGATG...ATTTACGGGTGGCAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR TCA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGATGGGGAGAAAACAGTaGGGTACAGCATGCATTTAC | + |
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Preference number: 4 (lower is better) Translates to: CYTLCFDMETVVTQNLKLMGRKQ*GTACIY Trigger: GTAAATGCATGCTGTACCTCACTGTTTTCTCCCCAT...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR GCA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGATGATAGCCATGAAATaGATCAGCCACAGCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: CYTLCFDMETVVTQNLKLMIAMK*ISHSTK Trigger: CTTGGTGCTGTGGCTGATGCATTTCATGGCTATCAT...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS-3UTR GCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTAGACACCTGGGAGCTTaGTATAAGGCTGTTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVRHLGA*YKAVCQ Trigger: CTGACAAACAGCCTTATAGCAAGCTCCCAGGTGTCT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTATTACGCTTCGGCAGTaGAAAGGATGGCATCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVITLRQ*KGWHQP Trigger: TGGTTGATGCCATCCTTTGCACTGCCGAAGCGTAAT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CCA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGAAGTTAAGCACAACCTaGCGAGCAAGTTTAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLKLSTT*RASLAA Trigger: TGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTT...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CCA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGCGGCAGTGCAAAGGATaGCATCAACCAAACTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: CYTLCFDMETVVTQNLKLRQCKG*HQPNFI Trigger: AATGAAGTTTGGTTGATGCCATCCTTTGCACTGCCG...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR TCA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAAATTTACAACCAGCGCTaGTCTAGTCTATTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQIYNQR*SSLFCH Trigger: ATGACAAAATAGACTAGATCAGCGCTGGTTGTAAAT...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTTTACACTGTCCATACTaGGATCAGCAGAGAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVLHCPY*DQQRAK Trigger: CTTAGCTCTCTGCTGATCTCAGTATGGACAGTGTAA...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTACTCCACTAGCACACTaGACAAACCTACAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVTPLAH*TNLQNC Trigger: ACAGTTCTGTAGGTTTGTTCAGTGTGCTAGTGGAGT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR GCA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGTTCCTGTGGACAACATaGCATCCAATCCTGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CYTLCFDMETVVTQNLKLFLWTT*HPILKK Trigger: TTTCTTCAGGATTGGATGGCATGTTGTCCACAGGAA...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CCA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAAACATACATCAATGGCTaGATCATCATGATCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQTYING*IIMILY Trigger: GTACAAGATCATGATGATCCAGCCATTGATGTATGT...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTAAACTCAGCCGCTTTTaGTTCATTGCAGTGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVKLSRF*FIAVRP Trigger: TGGTCTCACTGCAATGAACCAAAAGCGGCTGAGTTT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR TCA 90 bp | ACAGAACCAACAAGAGTTGGTCAAAAAGATGCCTTCAATACATGGCTACAATTAAACCATGCCAGGCAATaGCACATGAAAAATACCATA | + |
|
Preference number: 4 (lower is better) Translates to: TEPTRVGQKDAFNTWLQLNHARQ*HMKNTI Trigger: TATGGTATTTTTCATGTGTCATTGCCTGGCATGGTT...TAATTGTAGCCATGTATTGAAGGCATCTTTTTGACCAACTCTTGTTGGTTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| 3UTR CAA 72 bp | GTGATTAACAATGGTTCAAGACAGAACCAACAAGAGTaGGTCAAAAAGATGCCTTCAATACATGGCTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VINNGSRQNQQE*VKKMPSIHGYN Trigger: ATTGTAGCCATGTATTGAAGGCATCTTTTTGACCAACTCTTGTTGGTTCTGTCTTGAACCATTGTTAATCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTCTACACATTATGCTTTaGCATGGAGACTGTAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVLHIML*HGDCSN Trigger: GTTACTACAGTCTCCATGTCAAAGCATAATGTGTAG...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR GCA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGAGCTATAAGTCCTCCTaGTTGATCCAACACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLSYKSS*LIQHIF Trigger: AAAGATGTGTTGGATCAAGCAGGAGGACTTATAGCT...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CCA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGAGAACCAACAAGAGTTaGTCAAAAAGATGCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CYTLCFDMETVVTQNLKLRTNKS*SKRCLQ Trigger: TTGAAGGCATCTTTTTGACCAACTCTTGTTGGTTCT...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTGGCAACAAAGCATTCTaGAATTGGCTCACAAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVGNKAF*NWLTNY Trigger: ATAATTTGTGAGCCAATTTCAGAATGCTTTGTTGCC...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR GCA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGGTCAAATATAAACCATaGCAGGCAATGACACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLVKYKP*QAMTHE Trigger: TTCATGTGTCATTGCCTGGCATGGTTTATATTTGAC...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTAGTTGGTCAAAAAGATaGCTTCAATACATGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: TVLVYIYKTQEVCPAILVSWSKR*LQYMAT Trigger: TGTAGCCATGTATTGAAGGCATCTTTTTGACCAACT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CCA 90 bp | ACAGAACCAACAAGAGTTGGTCAAAAAGATGCCTTCAATACATGGCTACAATTATCTTACATACATCAATaGCTGGATCATCATGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEPTRVGQKDAFNTWLQLSYIHQ*LDHHDL Trigger: AAGATCATGATGATCCAGCCATTGATGTATGTAAGA...TAATTGTAGCCATGTATTGAAGGCATCTTTTTGACCAACTCTTGTTGGTTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CCA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGATAAAGTGTATCATTTaGCCAAGACTACAGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CYTLCFDMETVVTQNLKLIKCII*PRLQMC Trigger: ACACATCTGTAGTCTTGGCCAAATGATACACTTTAT...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| 3UTR CAA 72 bp | ATGATGAACGAACCCAGGTTCCTAGAACCAATTCTCTaGATTCTCTACTTCCACAAAATAAAGTGTATCATT | + |
|
Preference number: 4 (lower is better) Translates to: MMNEPRFLEPIL*ILYFHKIKCII Trigger: AATGATACACTTTATTTTGTGGAAGTAGAGAATCAAGAGAATTGGTTCTAGGAACCTGGGTTCGTTCATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS CCA 90 bp | TCGGCGCGCTCGCGGGCGGCTGCGGGTGCTGCGGTCTCCCGGCTCTaGTCGGGGCGACCGCGGTCCCGCGCTCCGGTTCGCCTCTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SARSRAAAGAAVSRL*SGRPRSRAPVRLSR Trigger: TCGGGAGAGGCGAACCGGAGCGCGGGACCGCGGTCGCCCCGACCAGAGCCGGGAGACCGCAGCACCCGCAGCCGCCCGCGAGCGCGCCGA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGAGTACCTCGCCATGTGTaGTTCACTGCACAAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPQVKHNLASKFSGMMGRVPRHV*FTAQNH Trigger: ATGGTTTTGTGCAGTGAACAACACATGGCGAGGTAC...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGGGAGGAGCAAGGAAGGAAAAGATTTAGCTATACTAATTACAGCACAGCAACTTGAGTGGACATaGCAAACCTCCAACCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GWGRSKEGKDLAILITAQQLEWT*QTSNLG Trigger: ACCGAGGTTGGAGGTTTGCAATGTCCACTCAAGTTG...CTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTCCTTGCTCCTCCCCCAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | TCACCACAAGTTAAGCACAACCTGGCGAGCAAGTTTAGCGGCATGATGGGGAGATATAAGTCCTCCTGCTaGATCCAACACATCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPQVKHNLASKFSGMMGRYKSSC*IQHIFS Trigger: AGAAAAGATGTGTTGGATCAAGCAGGAGGACTTATA...TCTCCCCATCATGCCGCTAAACTTGCTCGCCAGGTTGTGCTTAACTTGTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS CCA 90 bp | ACTGAGAAATTGAATATGAGCCAGAGTTTTGCATTGCAACTTGAGTaGACATTGCAAACCTCCAACCTCGGTCAGCTATCGCTTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TEKLNMSQSFALQLE*TLQTSNLGQLSLWP Trigger: TGGCCAAAGCGATAGCTGACCGAGGTTGGAGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAACTCTGGCTCATATTCAATTTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCCACCCGTAAATCAAACTCAGCCGCTTTaGGTTCATTGCAGTGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: HSFYYLLNSKAKLLPPVNQTQPL*VHCSET Trigger: GGTCTCACTGCAATGAACCAAAAGCGGCTGAGTTTG...ATTTACGGGTGGCAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGGGAGGAGCAAGGAAGGAAAAGATTTAGCTATACTAATTACAGCACAGTATGCATCCAAGCCTTaGTTCATAAAGAAAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWGRSKEGKDLAILITAQYASKP*FIKKMP Trigger: GGGCATTTTCTTTATGAACAAAGGCTTGGATGCATA...CTGTGCTGTAATTAGTATAGCTAAATCTTTTCCTTCCTTGCTCCTCCCCCAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS GCA 90 bp | GCCACCCTGGACACCCCTGAGTTGAATGTAGTCAAATATAAACCATaGCAGGCAATGACACATGAAAAATACCATAATATCCCATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ATLDTPELNVVKYKP*QAMTHEKYHNIPSE Trigger: TTCAGATGGGATATTATGGTATTTTTCATGTGTCATTGCCTGGCATGGTTTATATTTGACTACATTCAACTCAGGGGTGTCCAGGGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCCACCCGTAAATTTGTCAGTTGCCTTCTaGTTGAGGTGTAATCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSFYYLLNSKAKLLPPVNLSVAF*LRCNRV Trigger: CACCCGATTACACCTCAACAAGAAGGCAACTGACAA...ATTTACGGGTGGCAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTTTTCACTGTGCAACTTTCCTCAGGGAATAATACCCATTCACAGAAAGAAGTTTTGCATTGCAACTaGAGTGGACATTGCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LVFTVQLSSGNNTHSQKEVLHCN*SGHCKP Trigger: AGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAAC...TTCTTTCTGTGAATGGGTATTATTCCCTGAGGAAAGTTGCACAGTGAAAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTTTTCACTGTGCAACTTTCCTCAGGGAATAATACCCATTCACAGAAAGAAGTCTGTCCAGCCATTTaGGTTTTGTTGTTACACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVFTVQLSSGNNTHSQKEVCPAI*VLLLHC Trigger: ACAGTGTAACAACAAAACCAAAATGGCTGGACAGAC...TTCTTTCTGTGAATGGGTATTATTCCCTGAGGAAAGTTGCACAGTGAAAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTTTTCACTGTGCAACTTTCCTCAGGGAATAATACCCATTCACAGAAAGAACTGCATAATCAAGTTTaGAAAAACACAGTGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVFTVQLSSGNNTHSQKELHNQV*KNTVCH Trigger: GTGGCACACTGTGTTTTTCAAAACTTGATTATGCAG...TTCTTTCTGTGAATGGGTATTATTCCCTGAGGAAAGTTGCACAGTGAAAACCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGTTTAAAGCTGCCATATaGCCAGTGTTAGCCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLFKAAI*PVLALQ Trigger: CTGCAGGGCTAACACTGGCAATATGGCAGCTTTAAA...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | AAGCATGAAAAAGTTTCTCAGTTAGTACCTCGCCATGTGTTGTTCACTGCACAAATCATCACTCCAAGCTaGCTAAACAAAGAATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KHEKVSQLVPRHVLFTAQIITPS*LNKESL Trigger: GAGAGATTCTTTGTTTAGCAAGCTTGGAGTGATGAT...TTGTGCAGTGAACAACACATGGCGAGGTACTAACTGAGAAACTTTTTCATGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTAGCCAGAGTTTTGCATaGCAACTTGAGTGGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: TVLVYIYKTQEVCPAILVSQSFA*QLEWTL Trigger: CAATGTCCACTCAAGTTGCAATGCAAAACTCTGGCT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTTGGATCATCATGATCTaGTACACAAAGGAGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVLVYIYKTQEVCPAILVWIIMI*YTKEHF Trigger: GAAGTGCTCCTTTGTGTACAAGATCATGATGATCCA...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCCACCCGTAAATAATAAAGTGTATCATTaGGCCAAGACTACAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSFYYLLNSKAKLLPPVNNKVYH*AKTTDV Trigger: CACATCTGTAGTCTTGGCCAAATGATACACTTTATT...ATTTACGGGTGGCAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCAGAACCAACAAGAGTaGGTCAAAAAGATGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLQNQQE*VKKMPS Trigger: TGAAGGCATCTTTTTGACCAACTCTTGTTGGTTCTG...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTCCAGCCATTTTGGTTTaGTTGTTACACTGTCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: TVLVYIYKTQEVCPAILVPAILV*LLHCPY Trigger: GTATGGACAGTGTAACAACAAAACCAAAATGGCTGG...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS TCA 90 bp | CCAACACATCTTTTCTCATTAAACAAGACATTCCTGTCACACATTTaGAACCAGTTACATTGGCAGAGATATAGTATCTTGGATGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PTHLFSLNKTFLSHI*NQLHWQRYSILDVK Trigger: CTTCACATCCAAGATACTATATCTCTGCCAATGTAACTGGTTTCAAATGTGTGACAGGAATGTCTTGTTTAATGAGAAAAGATGTGTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374279.4 ENST00000474306.1 ENST00000495085.1 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCTAGTTTATATTTACAAAACACAAGAAGTCTGTCCAGCCATTTTGGTTATGTTAATTCGTAGTTaGGTCCACCTGATCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVLVYIYKTQEVCPAILVMLIRS*VHLIIL Trigger: CAGAATGATCAGGTGGACCAAACTACGAATTAACAT...AACCAAAATGGCTGGACAGACTTCTTGTGTTTTGTAAATATAAACTAGGACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | GACATGAATAGTCATTCCTTCTATTATCTTCTAAACTCTAAAGCAAAGCTGCTGCTGGACACCCCTGAGTaGAATGTAGTCAAATATAAA | + |
|
Preference number: 5 (lower is better) Translates to: DMNSHSFYYLLNSKAKLLLDTPE*NVVKYK Trigger: TTTATATTTGACTACATTCAACTCAGGGGTGTCCAG...CAGCAGCTTTGCTTTAGAGTTTAGAAGATAATAGAAGGAATGACTATTCATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGCTAGAACCAATTCTCTaGATTCTCTACTTCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: CYTLCFDMETVVTQNLKLLEPIL*ILYFHK Trigger: TTTGTGGAAGTAGAGAATCAAGAGAATTGGTTCTAG...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | TGCTACACATTATGCTTTGACATGGAGACTGTAGTAACTCAGAATTTAAAGCTGCTGTCACAGAGTTTGTaGCAGAGCATCTATATATAT | + |
|
Preference number: 5 (lower is better) Translates to: CYTLCFDMETVVTQNLKLLSQSL*QSIYIY Trigger: ATATATATAGATGCTCTGCAACAAACTCTGTGACAG...CAGCTTTAAATTCTGAGTTACTACAGTCTCCATGTCAAAGCATAATGTGTAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
||
| CDS-3UTR CAA 90 bp | ACAGAACCAACAAGAGTTGGTCAAAAAGATGCCTTCAATACATGGCTACAATTAATACTGTCACAGAGTTaGTTGCAGAGCATCTATATA | + |
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Preference number: 5 (lower is better) Translates to: TEPTRVGQKDAFNTWLQLILSQS*LQSIYI Trigger: TATATAGATGCTCTGCAACAAACTCTGTGACAGTAT...TAATTGTAGCCATGTATTGAAGGCATCTTTTTGACCAACTCTTGTTGGTTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS GCA 72 bp | GCTGTCTTCGGCGCGCTCGCGGGCGGCTGCGGGTGCTaGGGTCTCCCGGCTCTGGTCGGGGCGACCGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: AVFGALAGGCGC*GLPALVGATAV Trigger: GACCGCGGTCGCCCCGACCAGAGCCGGGAGACCGCAGCACCCGCAGCCGCCCGCGAGCGCGCCGAAGACAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS CAA 72 bp | ATGAGCCAGAGTTTTGCATTGCAACTTGAGTGGACATaGCAAACCTCCAACCTCGGTCAGCTATCGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: MSQSFALQLEWT*QTSNLGQLSLW Trigger: CCAAAGCGATAGCTGACCGAGGTTGGAGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAACTCTGGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS CCA 72 bp | ATCTACCCCTTTCAGTGGTTTCAGAAGAGAGACACCTaGGAGCTTGCTATAAGGCTGTTTGTCAGTTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: IYPFQWFQKRDT*ELAIRLFVSCL Trigger: AAGGCAACTGACAAACAGCCTTATAGCAAGCTCCCAGGTGTCTCTCTTCTGAAACCACTGAAAGGGGTAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000374279.4 ENST00000489355.1 ENST00000490110.5 ENST00000495085.1 |
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| CDS CCA 72 bp | TTGAATATGAGCCAGAGTTTTGCATTGCAACTTGAGTaGACATTGCAAACCTCCAACCTCGGTCAGCTATCG | + |
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Preference number: 6 (lower is better) Translates to: LNMSQSFALQLE*TLQTSNLGQLS Trigger: CGATAGCTGACCGAGGTTGGAGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAACTCTGGCTCATATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS TCA 72 bp | GAAATTGAATATGAGCCAGAGTTTTGCATTGCAACTTaGGTGGACATTGCAAACCTCCAACCTCGGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: EIEYEPEFCIAT*VDIANLQPRSA Trigger: AGCTGACCGAGGTTGGAGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAACTCTGGCTCATATTCAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS CAA 72 bp | AGGCAGCCCGTGAACCAAGCCTACTTTTTCTGTCATTaGATTCACCATGTCAGTAAGCGTATCTGGAATTAC | + |
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Preference number: 6 (lower is better) Translates to: RQPVNQAYFFCH*IHHVSKRIWNY Trigger: GTAATTCCAGATACGCTTACTGACATGGTGAATCAAATGACAGAAAAAGTAGGCTTGGTTCACGGGCTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374279.4 ENST00000495085.1 |
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| CDS CAA 90 bp | TTCTGGATTGAAACTGAGAAATTGAATATGAGCCAGAGTTTTGCATaGCAACTTGAGTGGACATTGCAAACCTCCAACCTCGGTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: FWIETEKLNMSQSFA*QLEWTLQTSNLGQL Trigger: TAGCTGACCGAGGTTGGAGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAACTCTGGCTCATATTCAATTTCTCAGTTTCAATCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS GCA 72 bp | GACACCCCTGAGTTGAATGTAGTCAAATATAAACCATaGCAGGCAATGACACATGAAAAATACCATAATATC | + |
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Preference number: 6 (lower is better) Translates to: DTPELNVVKYKP*QAMTHEKYHNI Trigger: GATATTATGGTATTTTTCATGTGTCATTGCCTGGCATGGTTTATATTTGACTACATTCAACTCAGGGGTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS CAA 72 bp | CTTCTTACATACATCAATGGCTGGATCATCATGATCTaGTACACAAAGGAGCACTTCATATTTGGGATAATC | + |
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Preference number: 6 (lower is better) Translates to: LLTYINGWIIMI*YTKEHFIFGII Trigger: GATTATCCCAAATATGAAGTGCTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374279.4 |
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| CDS CAA 72 bp | CTTCTTACATACATCAATGGCTGGATCATCATGATCTaGTACACAAAGGAGCACTTCATACTAGTCAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LLTYINGWIIMI*YTKEHFILVKK Trigger: CTTTTTGACTAGTATGAAGTGCTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAAGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000495085.1 |
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| CDS CAA 90 bp | TGCTGCATTAAGGCTATCACATCTGTGTCTTCTCTATTCTTTTCATaGGTGCTACCGAGAAAAATAAAGGTTTGGGATAATCCAATTCAA | + |
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Preference number: 6 (lower is better) Translates to: CCIKAITSVSSLFFS*VLPRKIKVWDNPIQ Trigger: TTGAATTGGATTATCCCAAACCTTTATTTTTCTCGGTAGCACCAATGAAAAGAATAGAGAAGACACAGATGTGATAGCCTTAATGCAGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490110.5 |
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| CDS CAA 72 bp | CTTCTTACATACATCAATGGCTGGATCATCATGATCTaGTACACAAAGGAGCACTTCATATTAATAAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLTYINGWIIMI*YTKEHFILISA Trigger: AGCACTTATTAATATGAAGTGCTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAAGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490110.5 |
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| CDS TCA 72 bp | CTTTTCTCATTAAACAAGACATTCCTGTCACACATTTaGAACCAGTTACATTGGCAGAGATATAGTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: LFSLNKTFLSHI*NQLHWQRYSIL Trigger: CAAGATACTATATCTCTGCCAATGTAACTGGTTTCAAATGTGTGACAGGAATGTCTTGTTTAATGAGAAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374279.4 ENST00000474306.1 ENST00000495085.1 |
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