Pregenerated sensors for UFSP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176125Ensembl transcript IDs: ENST00000388761.4, ENST00000672365.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTaGAGGGACACCAGTGGGAGGTACATAGGTGCGTGTCTGGGACCC | + |
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Preference number: 1 (lower is better) Translates to: LSPATFIIDVKSARL*RDTSGRYIGACLGP Trigger: GGGTCCCAGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| 3UTR GCA 72 bp | CAGGCTTTGCAGGGACACCAGTGGGAGGTACATAGGTaGGTGTCTGGGACCCGAGAATCTCAGTTCTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: QALQGHQWEVHR*VSGTRESQFCN Trigger: GTTACAGAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| 3UTR GCA 72 bp | GCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTaGAGGGACACCAGTGGGAGGTACATAGGTGCGTGT | + |
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Preference number: 3 (lower is better) Translates to: ATFIIDVKSARL*RDTSGRYIGAC Trigger: ACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGGGGGACAGGCCCACGTaGACGTCCCTCAGCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CQKRQALQGHQWEVHRCVGDRPT*TSLSGS Trigger: GGAGCCGCTGAGGGACGTCCACGTGGGCCTGTCCCC...CACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | CTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGTCTGGGACCCGAGAATCGCGGGCTGGCCCTCTaGCCACGAGCACAGCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LCRDTSGRYIGACLGPENRGLAL*PRAQRL Trigger: CAGACGCTGTGCTCGTGGCCAGAGGGCCAGCCCGCG...ATTCTCGGGTCCCAGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACGGGTCTTGGGCCAGCTaGCGCAGGACCGGCGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSPATFIIDVKSARLCRDGSWAS*RRTGAQ Trigger: CTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGACCC...GTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | GGGAGGTACATAGGTGCGTGTCTGGGACCCGAGAATCTCAGTTCTGTAACTTCGTTCGGCTCCGGGTCTTaGGCCAGCTGCCGCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: GRYIGACLGPENLSSVTSFGSGS*ASCRRT Trigger: GGTCCTGCGGCAGCTGGCCCAAGACCCGGAGCCGAA...CGAAGTTACAGAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | AGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCGGTACGCCCGCGGGCTaGCCCTCTGGCCACGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SPATFIIDVKSARLCRDTGTPAG*PSGHEH Trigger: GTGCTCGTGGCCAGAGGGCCAGCCCGCGGGCGTACC...GGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR TCA 90 bp | AGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCTGGGGCCCTCCGAAGTaGGCGAGGCAGAGGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SPATFIIDVKSARLCRDTWGPPK*ARQRLA Trigger: GGCCAGCCTCTGCCTCGCTCACTTCGGAGGGCCCCA...GGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | AGTGGGAGGTACATAGGTGCGTGTCTGGGACCCGAGAATCTCAGTTCTGTAACTGAGCGAGGCAGAGGCTaGCCTCCACGCAGCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: SGRYIGACLGPENLSSVTERGRG*PPRSRS Trigger: GGATCGGCTGCGTGGAGGCCAGCCTCTGCCTCGCTC...AGTTACAGAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTCCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | GGACACCAGTGGGAGGTACATAGGTGCGTGTCTGGGACCCGAGAATCTCAGTTCTCCAAGGTGCGCTGCTaGTGTTGGGAGCTAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GHQWEVHRCVSGTRESQFSKVRC*CWELRL Trigger: CAGCCTTAGCTCCCAACAGCAGCAGCGCACCTTGGA...GAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTCCCACTGGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | CTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGTCTGGGACCCGAGAATGTGCGCTGCTGCTGTTaGGAGCTAAGGCTGGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LCRDTSGRYIGACLGPENVRCCC*ELRLVK Trigger: CTTGACCAGCCTTAGCTCCCAACAGCAGCAGCGCAC...ATTCTCGGGTCCCAGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGTGGGGCTTTTTGGAGTaGCCCAGTAGTGAGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CQKRQALQGHQWEVHRCVWGFLE*PSSEGP Trigger: TGGACCCTCACTACTGGGGCACTCCAAAAAGCCCCA...CACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | GAGGTACATAGGTGCGTGTCTGGGACCCGAGAATCTCAGTTCTGTAACTTCGTCGCTGCACTCACCTCTTaGCAGCCCACCCACCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EVHRCVSGTRESQFCNFVAALTS*QPTHPA Trigger: TGCTGGGTGGGTGGGCTGGCAAGAGGTGAGTGCAGC...GACGAAGTTACAGAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | GAGGTACATAGGTGCGTGTCTGGGACCCGAGAATCTCAGTTCTGTAACTTCGTCCTCCCAGCAAGGCCTTaGACCTGGCATCTGCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: EVHRCVSGTRESQFCNFVLPARP*TWHLRP Trigger: GGGACGCAGATGCCAGGTCCAAGGCCTTGCTGGGAG...GACGAAGTTACAGAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | CAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGTCTTTGCAGGGACACCAGTaGGAGGTACATAGGTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: QKRQALQGHQWEVHRCVSLQGHQ*EVHRCV Trigger: CACGCACCTATGTACCTCCCACTGGTGTCCCTGCAA...AGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR TCA 90 bp | CCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTCTCCCCGGGCCTCGTTaGTCACCGCAGGCCGCAATA | + |
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Preference number: 4 (lower is better) Translates to: PATFIIDVKSARLCRDTSLPGPR*SPQAAI Trigger: TATTGCGGCCTGCGGTGATCAACGAGGCCCGGGGAG...ACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | TTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTACACAGCGTCTGCAGAGTaGGGTAGCCGCAGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FIIDVKSARLCRDTSGRYTASAE*GSRSPS Trigger: GCTGGGGCTGCGGCTACCGCACTCTGCAGACGCTGT...GTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | CCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTTGGGCCCCCACCCCCTaGGAAGTGCGAGTAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PATFIIDVKSARLCRDTSWAPTP*EVRVKP Trigger: AGGCTTTACTCGCACTTCGCAGGGGGTGGGGGCCCA...ACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACGTCCTCAGTCCAAGGTaGGCTGCTGCTGTTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LSPATFIIDVKSARLCRDVLSPR*AAAVGS Trigger: GCTCCCAACAGCAGCAGCGCACCTTGGACTGAGGAC...GTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | CTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGTCTGGGACCCGAGAATGGTTGTAGAAGGAGTTaGGGTCAAAGGCTGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: LCRDTSGRYIGACLGPENGCRRS*GQRLHS Trigger: TGAGTGCAGCCTTTGACCCCAACTCCTTCTACAACC...ATTCTCGGGTCCCAGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR TCA 90 bp | CTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTATAGGCTTCCGTGCCTaGCCCTACGCAGACTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLLLMSKAPGFAGTPVGGIGFRA*PYADSQ Trigger: CTGGGAGTCTGCGTAGGGTCAGGCACGGAAGCCTAT...ACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | AGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCGTTGGGGTCAAAGGCTaGACTCACCTCTTGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPATFIIDVKSARLCRDTVGVKG*THLLPA Trigger: GGCTGGCAAGAGGTGAGTGCAGCCTTTGACCCCAAC...GGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | GAGGTACATAGGTGCGTGTCTGGGACCCGAGAATCTCAGTTCTGTAACTTCGTCTGGGAGGTACATAGGTaGGTGTCTGGGACCCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: EVHRCVSGTRESQFCNFVWEVHR*VSGTRE Trigger: TTCTCGGGTCCCAGACACGCACCTATGTACCTCCCA...GACGAAGTTACAGAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | TTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTACGGACATAGGCTTCCGTaGCTGACCCTACGCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: FIIDVKSARLCRDTSGRYGHRLP*LTLRRL Trigger: GAGTCTGCGTAGGGTCAGGCACGGAAGCCTATGTCC...GTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | CCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTCAGTCCAAGGTGCGCTaGTGCTGTTGGGAGCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: PATFIIDVKSARLCRDTSQSKVR*CCWELR Trigger: CCTTAGCTCCCAACAGCAGCAGCGCACCTTGGACTG...ACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR GCA 90 bp | CCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAAAAAGCGCCAGGCTTTaGAGGGACACCAGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PLLLLMSKAPGFAGTPVGKSARL*RDTSGR Trigger: CCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTT...TCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CCA 90 bp | CTCAGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACCAGCCTGTAGTTCACTaGGGCTTTTTGGAGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSPATFIIDVKSARLCRDQPVVH*GFLECP Trigger: GGGGCACTCCAAAAAGCCCCAGTGAACTACAGGCTG...GTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR TCA 90 bp | GAGGTACATAGGTGCGTGTCTGGGACCCGAGAATCTCAGTTCTGTAACTTCGTCTGCCACTTTTATTATTaGTGTCAAAAGCGCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EVHRCVSGTRESQFCNFVCHFYY*CQKRQA Trigger: AGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCA...GACGAAGTTACAGAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS GCA 90 bp | CGCCCGCGGGCTGGCCCTCTGGCCACGAGCACAGCGTCTGCAGAGTaGGGTAGCCGCAGCCCCAGCCGCGGTCGTCCAGGCCGTCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RPRAGPLATSTASAE*GSRSPSRGRPGRRS Trigger: GCTGCGACGGCCTGGACGACCGCGGCTGGGGCTGCGGCTACCGCACTCTGCAGACGCTGTGCTCGTGGCCAGAGGGCCAGCCCGCGGGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS TCA 90 bp | CGCAGGACCGGCGCGCAGACTGGGGACGCGCTCCCCGGGCCTCGTTaGTCACCGCAGGCCGCAATAGGCAGCCACCGACCGGCACCGACC | + |
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Preference number: 5 (lower is better) Translates to: RRTGAQTGDALPGPR*SPQAAIGSHRPAPT Trigger: GGTCGGTGCCGGTCGGTGGCTGCCTATTGCGGCCTGCGGTGATCAACGAGGCCCGGGGAGCGCGTCCCCAGTCTGCGCGCCGGTCCTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CCA 90 bp | CGGCTCCGGGTCTTGGGCCAGCTGCCGCAGGACCGGCGCGCAGACTaGGGACGCGCTCCCCGGGCCTCGTTGATCACCGCAGGCCGCAAT | + |
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Preference number: 5 (lower is better) Translates to: RLRVLGQLPQDRRAD*GRAPRASLITAGRN Trigger: ATTGCGGCCTGCGGTGATCAACGAGGCCCGGGGAGCGCGTCCCCAGTCTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGACCCGGAGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CCA 90 bp | CGCCTGTACGGCGGCCAGTCCAGGTACGCCCGCGGGCTGGCCCTCTaGCCACGAGCACAGCGTCTGCAGAGTGCGGTAGCCGCAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RLYGGQSRYARGLAL*PRAQRLQSAVAAAP Trigger: TGGGGCTGCGGCTACCGCACTCTGCAGACGCTGTGCTCGTGGCCAGAGGGCCAGCCCGCGGGCGTACCTGGACTGGCCGCCGTACAGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS GCA 90 bp | CCTCAGGCTCCAACACTTCCTTTCGGCTCCGGGTCTTGGGCCAGCTaGCGCAGGACCGGCGCGCAGACTGGGGACGCGCTCCCCGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PQAPTLPFGSGSWAS*RRTGAQTGDALPGP Trigger: AGGCCCGGGGAGCGCGTCCCCAGTCTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGACCCGGAGCCGAAAGGAAGTGTTGGAGCCTGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CCA 90 bp | GCGGAGCGACCTCAGGCTCCAACACTTCCTTTCGGCTCCGGGTCTTaGGCCAGCTGCCGCAGGACCGGCGCGCAGACTGGGGACGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: AERPQAPTLPFGSGS*ASCRRTGAQTGDAL Trigger: GAGCGCGTCCCCAGTCTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGACCCGGAGCCGAAAGGAAGTGTTGGAGCCTGAGGTCGCTCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CAA 90 bp | CTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGTCTGGGACCCGAGAATGGCTGCACTCACCTCTaGCCAGCCCACCCACCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LCRDTSGRYIGACLGPENGCTHL*PAHPPS Trigger: GCTGGGTGGGTGGGCTGGCAAGAGGTGAGTGCAGCC...ATTCTCGGGTCCCAGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS TCA 90 bp | GCCCCAGTAGTGAGGGTCCAATACCAGGACATAGGCTTCCGTGCCTaGCCCTACGCAGACTCCCAGCAAGGCCTTGGACCTGGCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: APVVRVQYQDIGFRA*PYADSQQGLGPGIC Trigger: GCAGATGCCAGGTCCAAGGCCTTGCTGGGAGTCTGCGTAGGGTCAGGCACGGAAGCCTATGTCCTGGTATTGGACCCTCACTACTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS GCA 90 bp | AGCCCACCCACCCAGCAGCCTGTAGTTCACTGGGGCTTTTTGGAGTaGCCCAGTAGTGAGGGTCCAATACCAGGACATAGGCTTCCGTGC | + |
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Preference number: 5 (lower is better) Translates to: SPPTQQPVVHWGFLE*PSSEGPIPGHRLPC Trigger: GCACGGAAGCCTATGTCCTGGTATTGGACCCTCACTACTGGGGCACTCCAAAAAGCCCCAGTGAACTACAGGCTGCTGGGTGGGTGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS-3UTR CAA 90 bp | TGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGGGTGCGCTGCTGCTGTaGGGAGCTAAGGCTGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: CQKRQALQGHQWEVHRCVGALLL*GAKAGQ Trigger: TTGACCAGCCTTAGCTCCCAACAGCAGCAGCGCACC...CACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CAA 90 bp | AAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTACATAGGTGCGTGTCTGCAAAAGCGCCAGGCTTaGCAGGGACACCAGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KSARLCRDTSGRYIGACLQKRQA*QGHQWE Trigger: CTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTG...CAGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CAA 90 bp | CTCAGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACGCTCCCCGGGCCTCGTaGATCACCGCAGGCCGCAAT | + |
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Preference number: 5 (lower is better) Translates to: LSPATFIIDVKSARLCRDAPRAS*ITAGRN Trigger: ATTGCGGCCTGCGGTGATCAACGAGGCCCGGGGAGC...GTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS GCA 90 bp | CAAAAGCGCCAGGCTTTGCAGGGACACCAGTGGGAGGTACATAGGTaGGTGTCTGGGACCCGAGAATCTCAGTTCTGTAACTTCGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QKRQALQGHQWEVHR*VSGTRESQFCNFVL Trigger: GAGGACGAAGTTACAGAACTGAGATTCTCGGGTCCCAGACACGCACCTATGTACCTCCCACTGGTGTCCCTGCAAAGCCTGGCGCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CAA 90 bp | CCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACCAGTACTCCCAGCAAGGCCTaGGACCTGGCATCTGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: PATFIIDVKSARLCRDTSTPSKA*DLASAS Trigger: GGACGCAGATGCCAGGTCCAAGGCCTTGCTGGGAGT...ACTGGTGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS-3UTR CAA 90 bp | TCAGCCCTGCCACTTTTATTATTGATGTCAAAAGCGCCAGGCTTTGCAGGGACACTGCCACTTTTATTATaGATGTCAAAAGCGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SALPLLLLMSKAPGFAGTLPLLL*MSKAPG Trigger: GCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAG...TGTCCCTGCAAAGCCTGGCGCTTTTGACATCAATAATAAAAGTGGCAGGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CAA 90 bp | CCGCAGGACCGGCGCGCAGACTGGGGACGCGCTCCCCGGGCCTCGTaGATCACCGCAGGCCGCAATAGGCAGCCACCGACCGGCACCGAC | + |
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Preference number: 6 (lower is better) Translates to: PQDRRADWGRAPRAS*ITAGRNRQPPTGTD Trigger: GTCGGTGCCGGTCGGTGGCTGCCTATTGCGGCCTGCGGTGATCAACGAGGCCCGGGGAGCGCGTCCCCAGTCTGCGCGCCGGTCCTGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS TCA 72 bp | GGCGCGCAGACTGGGGACGCGCTCCCCGGGCCTCGTTaGTCACCGCAGGCCGCAATAGGCAGCCACCGACCG | + |
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Preference number: 6 (lower is better) Translates to: GAQTGDALPGPR*SPQAAIGSHRP Trigger: CGGTCGGTGGCTGCCTATTGCGGCCTGCGGTGATCAACGAGGCCCGGGGAGCGCGTCCCCAGTCTGCGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS GCA 72 bp | GCTGGCCCTCTGGCCACGAGCACAGCGTCTGCAGAGTaGGGTAGCCGCAGCCCCAGCCGCGGTCGTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AGPLATSTASAE*GSRSPSRGRPG Trigger: GCCTGGACGACCGCGGCTGGGGCTGCGGCTACCGCACTCTGCAGACGCTGTGCTCGTGGCCAGAGGGCCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS CCA 72 bp | GTCTTGGGCCAGCTGCCGCAGGACCGGCGCGCAGACTaGGGACGCGCTCCCCGGGCCTCGTTGATCACCGCA | + |
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Preference number: 6 (lower is better) Translates to: VLGQLPQDRRAD*GRAPRASLITA Trigger: TGCGGTGATCAACGAGGCCCGGGGAGCGCGTCCCCAGTCTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CCA 72 bp | GGCGGCCAGTCCAGGTACGCCCGCGGGCTGGCCCTCTaGCCACGAGCACAGCGTCTGCAGAGTGCGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: GGQSRYARGLAL*PRAQRLQSAVA Trigger: GGCTACCGCACTCTGCAGACGCTGTGCTCGTGGCCAGAGGGCCAGCCCGCGGGCGTACCTGGACTGGCCGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS CAA 72 bp | CGGCGCGCAGACTGGGGACGCGCTCCCCGGGCCTCGTaGATCACCGCAGGCCGCAATAGGCAGCCACCGACC | + |
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Preference number: 6 (lower is better) Translates to: RRADWGRAPRAS*ITAGRNRQPPT Trigger: GGTCGGTGGCTGCCTATTGCGGCCTGCGGTGATCAACGAGGCCCGGGGAGCGCGTCCCCAGTCTGCGCGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CCA 72 bp | GCCTGTACGGCGGCCAGTCCAGGTACGCCCGCGGGCTaGCCCTCTGGCCACGAGCACAGCGTCTGCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ACTAASPGTPAG*PSGHEHSVCRV Trigger: CACTCTGCAGACGCTGTGCTCGTGGCCAGAGGGCCAGCCCGCGGGCGTACCTGGACTGGCCGCCGTACAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS CAA 90 bp | CGCGGAGCGACCTCAGGCTCCAACACTTCCTTTCGGCTCCGGGTCTaGGGCCAGCTGCCGCAGGACCGGCGCGCAGACTGGGGACGCGCT | + |
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Preference number: 6 (lower is better) Translates to: RGATSGSNTSFRLRV*GQLPQDRRADWGRA Trigger: AGCGCGTCCCCAGTCTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGACCCGGAGCCGAAAGGAAGTGTTGGAGCCTGAGGTCGCTCCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS GCA 72 bp | CCAACACTTCCTTTCGGCTCCGGGTCTTGGGCCAGCTaGCGCAGGACCGGCGCGCAGACTGGGGACGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: PTLPFGSGSWAS*RRTGAQTGDAL Trigger: GAGCGCGTCCCCAGTCTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGACCCGGAGCCGAAAGGAAGTGTTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CCA 72 bp | CCTCAGGCTCCAACACTTCCTTTCGGCTCCGGGTCTTaGGCCAGCTGCCGCAGGACCGGCGCGCAGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: PQAPTLPFGSGS*ASCRRTGAQTG Trigger: CCCAGTCTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGACCCGGAGCCGAAAGGAAGTGTTGGAGCCTGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CAA 72 bp | ACCTCAGGCTCCAACACTTCCTTTCGGCTCCGGGTCTaGGGCCAGCTGCCGCAGGACCGGCGCGCAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: TSGSNTSFRLRV*GQLPQDRRADW Trigger: CCAGTCTGCGCGCCGGTCCTGCGGCAGCTGGCCCAAGACCCGGAGCCGAAAGGAAGTGTTGGAGCCTGAGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS TCA 72 bp | GTGAGGGTCCAATACCAGGACATAGGCTTCCGTGCCTaGCCCTACGCAGACTCCCAGCAAGGCCTTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: VRVQYQDIGFRA*PYADSQQGLGP Trigger: AGGTCCAAGGCCTTGCTGGGAGTCTGCGTAGGGTCAGGCACGGAAGCCTATGTCCTGGTATTGGACCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS GCA 72 bp | ACCCAGCAGCCTGTAGTTCACTGGGGCTTTTTGGAGTaGCCCAGTAGTGAGGGTCCAATACCAGGACATAGG | + |
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Preference number: 6 (lower is better) Translates to: TQQPVVHWGFLE*PSSEGPIPGHR Trigger: CCTATGTCCTGGTATTGGACCCTCACTACTGGGGCACTCCAAAAAGCCCCAGTGAACTACAGGCTGCTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000388761.4 ENST00000672365.2 |
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| CDS CAA 90 bp | CTCAGTTCTGTAACTTCGTCCTCAGTCCAAGGTGCGCTGCTGCTGTaGGGAGCTAAGGCTGGTCAAGCACAGGTTGTAGAAGGAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LSSVTSSSVQGALLL*GAKAGQAQVVEGVG Trigger: CCCAACTCCTTCTACAACCTGTGCTTGACCAGCCTTAGCTCCCAACAGCAGCAGCGCACCTTGGACTGAGGACGAAGTTACAGAACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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| CDS CAA 72 bp | GTAACTTCGTCCTCAGTCCAAGGTGCGCTGCTGCTGTaGGGAGCTAAGGCTGGTCAAGCACAGGTTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: VTSSSVQGALLL*GAKAGQAQVVE Trigger: TTCTACAACCTGTGCTTGACCAGCCTTAGCTCCCAACAGCAGCAGCGCACCTTGGACTGAGGACGAAGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388761.4 |
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