Pregenerated sensors for UFM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000120686Ensembl transcript IDs: ENST00000239878.9, ENST00000437952.1, ENST00000464423.1, ENST00000494372.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAAAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATaGGGTCTGTTGTTGGACGAAACATCACTACTATGTCTGTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: IKHSKNIVIWDHGHI*GLLLDETSLLCLWQ Trigger: CTGCCACAGACATAGTAGTGATGTTTCGTCCAACAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR TCA 90 bp | GAACAAATTCTGAGAAATGCTTCCTTAGGCAATTTTGTCACTATGTaGACATCAGAATGTACTTGTACAAACCTAGTTGATGTCACCTAC | + |
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Preference number: 1 (lower is better) Translates to: EQILRNASLGNFVTM*TSECTCTNLVDVTY Trigger: GTAGGTGACATCAACTAGGTTTGTACAAGTACATTCTGATGTTCACATAGTGACAAAATTGCCTAAGGAAGCATTTCTCAGAATTTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGGAGGCAGGAGAAGCCTaGCGACAGAGAGTCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KHSKNIVIWDHGHICGLLEAGEA*RQRVCL Trigger: GAGGCAGACTCTCTGTCGCCAGGCTTCTCCTGCCTC...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGGAACCTACCAACCTAGCCAGTTACAATAACCCCATTTTCTTCTCAACTGCCAGACACAATCCCTaGTTCCAGAGTTCACCATTC | + |
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Preference number: 2 (lower is better) Translates to: GLEPTNLASYNNPIFFSTARHNP*FQSSPF Trigger: GAATGGTGAACTCTGGAAGCAGGGATTGTGTCTGGC...AGTTGAGAAGAAAATGGGGTTATTGTAACTGGCTAGGTTGGTAGGTTCCAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGGAACCTACCAACCTAGCCAGTTACAATAACCCCATTTTCTTCTCAACTTTAGGCTATTTGGTATaGCCTATTGCTCCTAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: GLEPTNLASYNNPIFFSTLGYLV*PIAPRL Trigger: TAGCCTAGGAGCAATAGGCCATACCAAATAGCCTAA...AGTTGAGAAGAAAATGGGGTTATTGTAACTGGCTAGGTTGGTAGGTTCCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGGATTTGCATAGATACTaGTTTCTTCCGGAAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: KHSKNIVIWDHGHICGLLDLHRY*FLPEGQ Trigger: TTGCCCTTCCGGAAGAAATCAGTATCTATGCAAATC...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGGAACCTACCAACCTAGCCAGTTACAATAACCCCATTTTCTTCTCAACTTTGTACAAACCTAGTTaGTGTCACCTACTACAAACT | + |
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Preference number: 2 (lower is better) Translates to: GLEPTNLASYNNPIFFSTLYKPS*CHLLQT Trigger: AGTTTGTAGTAGGTGACATCAACTAGGTTTGTACAA...AGTTGAGAAGAAAATGGGGTTATTGTAACTGGCTAGGTTGGTAGGTTCCAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGGAACCTACCAACCTAGCCAGTTACAATAACCCCATTTTCTTCTCAACTTCCACCATTAAAAGCTaGTATGGGACACCAATTTAT | + |
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Preference number: 2 (lower is better) Translates to: GLEPTNLASYNNPIFFSTSTIKS*YGTPIY Trigger: ATAAATTGGTGTCCCATACCAGCTTTTAATGGTGGA...AGTTGAGAAGAAAATGGGGTTATTGTAACTGGCTAGGTTGGTAGGTTCCAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGTACCTGTTTGTGTTGTaGGGTAGCATCAAAGACTAT | + |
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Preference number: 2 (lower is better) Translates to: KHSKNIVIWDHGHICGLLYLFVL*GSIKDY Trigger: ATAGTCTTTGATGCTACCTCACAACACAAACAGGTA...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR GCA 72 bp | ACATTTCCAGCTCTAAAAAGAGCCAGACACAATCCCTaGTTCCAGAGTTCACCATTCAGAATACAGGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: TFPALKRARHNP*FQSSPFRIQEV Trigger: GACCTCCTGTATTCTGAATGGTGAACTCTGGAAGCAGGGATTGTGTCTGGCTCTTTTTAGAGCTGGAAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR CCA 72 bp | TTGATGTCACCTACTACAAACTTAGGCTATTTGGTATaGCCTATTGCTCCTAGGCTACAAACCTGTAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: LMSPTTNLGYLV*PIAPRLQTCRA Trigger: TGCTCTACAGGTTTGTAGCCTAGGAGCAATAGGCCATACCAAATAGCCTAAGTTTGTAGTAGGTGACATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR TCA 72 bp | CTGAGAAATGCTTCCTTAGGCAATTTTGTCACTATGTaGACATCAGAATGTACTTGTACAAACCTAGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: LRNASLGNFVTM*TSECTCTNLVD Trigger: ATCAACTAGGTTTGTACAAGTACATTCTGATGTTCACATAGTGACAAAATTGCCTAAGGAAGCATTTCTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS-3UTR CCA 90 bp | GGTTTGGAACCTACCAACCTAGCCAGTTACAATAACCCCATTTTCTTCTCAACTTTTGTACGGCAGCCGTaGGTCCGACGTCAGCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: GLEPTNLASYNNPIFFSTFVRQP*VRRQRD Trigger: ATCACGCTGACGTCGGACCCACGGCTGCCGTACAAA...AGTTGAGAAGAAAATGGGGTTATTGTAACTGGCTAGGTTGGTAGGTTCCAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| 3UTR CAA 72 bp | GTAATATGGGACCACGGTCATATATGCGGTCTGTTGTaGGACGAAACATCACTACTATGTCTGTGGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: VIWDHGHICGLL*DETSLLCLWQM Trigger: CATCTGCCACAGACATAGTAGTGATGTTTCGTCCAACAACAGACCGCATATATGACCGTGGTCCCATATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS-3UTR TCA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGATGGTGGTGCCGGAATaGATCCAGAACACACGACAA | + |
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Preference number: 4 (lower is better) Translates to: KHSKNIVIWDHGHICGLLMVVPE*IQNTRQ Trigger: TTGTCGTGTGTTCTGGATTCATTCCGGCACCACCAT...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS-3UTR CCA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGAGGAAACCTTCGACATaGTGGTGCCGGAATGAATCC | + |
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Preference number: 4 (lower is better) Translates to: KHSKNIVIWDHGHICGLLRKPST*WCRNES Trigger: GGATTCATTCCGGCACCACCATGTCGAAGGTTTCCT...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS-3UTR TCA 90 bp | GGTTTGGAACCTACCAACCTAGCCAGTTACAATAACCCCATTTTCTTCTCAACTGATTTGCATAGATACTaGTTTCTTCCGGAAGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GLEPTNLASYNNPIFFSTDLHRY*FLPEGQ Trigger: TTGCCCTTCCGGAAGAAATCAGTATCTATGCAAATC...AGTTGAGAAGAAAATGGGGTTATTGTAACTGGCTAGGTTGGTAGGTTCCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS-3UTR TCA 90 bp | GGTTTGGAACCTACCAACCTAGCCAGTTACAATAACCCCATTTTCTTCTCAACTTACCTGTTTGTGTTGTaGGGTAGCATCAAAGACTAT | + |
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Preference number: 4 (lower is better) Translates to: GLEPTNLASYNNPIFFSTYLFVL*GSIKDY Trigger: ATAGTCTTTGATGCTACCTCACAACACAAACAGGTA...AGTTGAGAAGAAAATGGGGTTATTGTAACTGGCTAGGTTGGTAGGTTCCAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS-3UTR CCA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGTTAGGCTATTTGGTATaGCCTATTGCTCCTAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: KHSKNIVIWDHGHICGLLLGYLV*PIAPRL Trigger: TAGCCTAGGAGCAATAGGCCATACCAAATAGCCTAA...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS-3UTR TCA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGTTGTACAAACCTAGTTaGTGTCACCTACTACAAACT | + |
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Preference number: 4 (lower is better) Translates to: KHSKNIVIWDHGHICGLLLYKPS*CHLLQT Trigger: AGTTTGTAGTAGGTGACATCAACTAGGTTTGTACAA...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS-3UTR GCA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGAAATGGACAGGCATTTaGAAGTACTGTTATGTATCA | + |
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Preference number: 4 (lower is better) Translates to: KHSKNIVIWDHGHICGLLKWTGI*KYCYVS Trigger: TGATACATAACAGTACTTGCAAATGCCTGTCCATTT...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS GCA 90 bp | AACATAAACCTAGTAATGAAGCCACATGGAAATGATGGGTCAAAGTaGATGCAACTCTTAAAGACATTTGAAGCATATTGGCAAACCGCA | + |
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Preference number: 5 (lower is better) Translates to: NINLVMKPHGNDGSK*MQLLKTFEAYWQTA Trigger: TGCGGTTTGCCAATATGCTTCAAATGTCTTTAAGAGTTGCATGCACTTTGACCCATCATTTCCATGTGGCTTCATTACTAGGTTTATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464423.1 ENST00000494372.1 |
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| CDS-3UTR CAA 90 bp | AAGCACAGTAAAAATATAGTAATATGGGACCACGGTCATATATGCGGTCTGTTGAAAATGGACAGGCATTaGCAAGTACTGTTATGTATC | + |
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Preference number: 5 (lower is better) Translates to: KHSKNIVIWDHGHICGLLKMDRH*QVLLCI Trigger: GATACATAACAGTACTTGCAAATGCCTGTCCATTTT...CAACAGACCGCATATATGACCGTGGTCCCATATTACTATATTTTTACTGTGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239878.9 |
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| CDS TCA 72 bp | TGTCAATTGACATATATAACCCCACCCACTCCTCTATaGGTTTTCAAATACTCACCAGCAGTCTGTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CQLTYITPPTPL*VFKYSPAVCAG Trigger: TCCTGCACAGACTGCTGGTGAGTATTTGAAAACTCATAGAGGAGTGGGTGGGGTTATATATGTCAATTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437952.1 |
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| CDS GCA 72 bp | CTAGTAATGAAGCCACATGGAAATGATGGGTCAAAGTaGATGCAACTCTTAAAGACATTTGAAGCATATTGG | + |
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Preference number: 6 (lower is better) Translates to: LVMKPHGNDGSK*MQLLKTFEAYW Trigger: CCAATATGCTTCAAATGTCTTTAAGAGTTGCATGCACTTTGACCCATCATTTCCATGTGGCTTCATTACTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464423.1 ENST00000494372.1 |
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| CDS CCA 72 bp | AAGTGCATGCAACTCTTAAAGACATTTGAAGCATATTaGCAAACCGCATTCCATAAAGGTTGTTCCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: KCMQLLKTFEAY*QTAFHKGCSNF Trigger: GAAGTTGGAACAACCTTTATGGAATGCGGTTTGCCAATATGCTTCAAATGTCTTTAAGAGTTGCATGCACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464423.1 ENST00000494372.1 |
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