Pregenerated sensors for UFC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000143222Ensembl transcript IDs: ENST00000368003.6, ENST00000467540.5, ENST00000473766.5, ENST00000482672.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCCCGTGCCTCCAGAATCGCATGTTGCTCCACCTGGGGGCGGATATAAATTACAGTAGCAGTACTGTTTaGTGTGTGTTTGTTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: PPCLQNRMLLHLGADINYSSSTV*CVFVSS Trigger: GGAAGAAACAAACACACACCAAACAGTACTGCTACT...GTAATTTATATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAGGCACGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| 3UTR-3UTR GCA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCCCCAGCAATGCCTACTaGAGCTACTTAGTAACAACT | + |
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Preference number: 2 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPPSNAY*SYLVTT Trigger: AGTTGTTACTAAGTAGCTGCAGTAGGCATTGCTGGG...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| 3UTR-3UTR GCA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCTTTCTTCCCCAGCAATaGCTACTGCAGCTACTTAGT | + |
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Preference number: 2 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPFLPQQ*LLQLLS Trigger: ACTAAGTAGCTGCAGTAGGCATTGCTGGGGAAGAAA...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR GCA 90 bp | CCCCCGTGCCTCCAGAATCGCATGTTGCTCCACCTGGGGGCGGATATAAATTACTCCAGAATCGCATGTTaGTCCACCTGGGGGCGGATA | + |
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Preference number: 4 (lower is better) Translates to: PPCLQNRMLLHLGADINYSRIAC*STWGRI Trigger: TATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGA...GTAATTTATATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAGGCACGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR CCA 90 bp | CCCCCGTGCCTCCAGAATCGCATGTTGCTCCACCTGGGGGCGGATATAAATTACACACAACACGTCGCGTaGCTTCATCCGCCATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PPCLQNRMLLHLGADINYTQHVA*LHPPSW Trigger: CCAAGATGGCGGATGAAGCCACGCGACGTGTTGTGT...GTAATTTATATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAGGCACGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR GCA 90 bp | CCCCCGTGCCTCCAGAATCGCATGTTGCTCCACCTGGGGGCGGATATAAATTACCCGTCAGGCATATTTTaGCACCCCTGTACATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPCLQNRMLLHLGADINYPSGIF*HPCTSL Trigger: CAAAGATGTACAGGGGTGGCAAAATATGCCTGACGG...GTAATTTATATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAGGCACGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR CCA 90 bp | CCCCCGTGCCTCCAGAATCGCATGTTGCTCCACCTGGGGGCGGATATAAATTACGAGTTCCTTCCTTGTTaGACTCCAGTCGGAACCAAT | + |
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Preference number: 4 (lower is better) Translates to: PPCLQNRMLLHLGADINYEFLPC*TPVGTN Trigger: ATTGGTTCCGACTGGAGTCCAACAAGGAAGGAACTC...GTAATTTATATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAGGCACGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR GCA 90 bp | CCCCCGTGCCTCCAGAATCGCATGTTGCTCCACCTGGGGGCGGATATAAATTACCCCAGCAATGCCTACTaGAGCTACTTAGTAACAACT | + |
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Preference number: 4 (lower is better) Translates to: PPCLQNRMLLHLGADINYPSNAY*SYLVTT Trigger: AGTTGTTACTAAGTAGCTGCAGTAGGCATTGCTGGG...GTAATTTATATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAGGCACGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR GCA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCAAGGTCCCTCTGCCCTaGCTCAGTGGCTTGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPKVPLP*LSGLIL Trigger: AAGAATCAAGCCACTGAGGCAGGGCAGAGGGACCTT...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR GCA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCTTTCAGTTACCCCCGTaGCTCCAGAATCGCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPFQLPP*LQNRML Trigger: CAACATGCGATTCTGGAGGCACGGGGGTAACTGAAA...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR GCA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCATCCAGCTCAGGAACTaGAATTTCTGGGGCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPIQLRN*NFWGSS Trigger: ACTACTGCCCCAGAAATTGCAGTTCCTGAGCTGGAT...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR CCA 90 bp | CCCCCGTGCCTCCAGAATCGCATGTTGCTCCACCTGGGGGCGGATATAAATTACTATTTCAGGAGGTCATaGATATACCAGCATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PPCLQNRMLLHLGADINYYFRRS*IYQHFP Trigger: TGGAAAATGCTGGTATATCCATGACCTCCTGAAATA...GTAATTTATATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAGGCACGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR TCA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCGGAAGCAGCTTTTATTaGTGGGTTATCTCCAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPGSSFY*WVISRN Trigger: GTTTCTGGAGATAACCCATCAATAAAAGCTGCTTCC...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR TCA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCCACAAAGGTTTGAAATaGTCCGTCAGGCATATTTTG | + |
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Preference number: 4 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPHKGLK*SVRHIL Trigger: CAAAATATGCCTGACGGATCATTTCAAACCTTTGTG...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR CCA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCAGTAGCAGTACTGTTTaGTGTGTGTTTGTTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPSSSTV*CVFVSS Trigger: GGAAGAAACAAACACACACCAAACAGTACTGCTACT...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR CAA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCCTCCAGAATCGCATGTaGCTCCACCTGGGGGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPLQNRM*LHLGAD Trigger: ATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAG...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS GCA 90 bp | ACATGTGACAGGGCAGCTTTGGTAGTGGGCGCTAGGATACCAAATTaGCTAACTCATATAAGACTCCCACCCCACACCTCCCAAGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: TCDRAALVVGARIPN*LTHIRLPPHTSQEG Trigger: ACCCTCTTGGGAGGTGTGGGGTGGGAGTCTTATATGAGTTAGGCAATTTGGTATCCTAGCGCCCACTACCAAAGCTGCCCTGTCACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482672.1 |
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| CDS CCA 90 bp | CCCCACACCTCCCAAGAGGGTCTACCTACCGAGTTCCTTCCTTGTTaGACTCCAGTCGGAACCAATCGTTGTCAGCATTCTTGTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PHTSQEGLPTEFLPC*TPVGTNRCQHSCCS Trigger: AGAACAACAAGAATGCTGACAACGATTGGTTCCGACTGGAGTCCAACAAGGAAGGAACTCGGTAGGTAGACCCTCTTGGGAGGTGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482672.1 |
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| CDS CCA 90 bp | TATTCTTCCAGTACTCAAATGATATCTTGGCTTAGGCCACCAGCCTaGGAGACTCATAGGATGGGAACTGGGGAACTCTGGCGCTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: YSSSTQMISWLRPPA*ETHRMGTGELWRCG Trigger: CCCACAGCGCCAGAGTTCCCCAGTTCCCATCCTATGAGTCTCCCAGGCTGGTGGCCTAAGCCAAGATATCATTTGAGTACTGGAAGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482672.1 |
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| CDS-3UTR CAA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCCGAGTTCCTTCCTTGTaGGACTCCAGTCGGAACCAA | + |
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Preference number: 5 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPRVPSL*DSSRNQ Trigger: TTGGTTCCGACTGGAGTCCAACAAGGAAGGAACTCG...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR CAA 90 bp | CCCCCGTGCCTCCAGAATCGCATGTTGCTCCACCTGGGGGCGGATATAAATTACAGGAAGCAGCTTTTATaGATGGGTTATCTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PPCLQNRMLLHLGADINYRKQLL*MGYLQK Trigger: TTTCTGGAGATAACCCATCAATAAAAGCTGCTTCCT...GTAATTTATATCCGCCCCCAGGTGGAGCAACATGCGATTCTGGAGGCACGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR CAA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCTGGTTGCATTTCTCTTaGTGTTGGATGACGCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPWLHFS*CWMTPF Trigger: GAAGGGCGTCATCCAACACAAAGAGAAATGCAACCA...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS-3UTR CAA 90 bp | CATGTTGCTCCACCTGGGGGCGGATATAAATTACCTCTAGATTGTCCAAAGCCCAGTCGGAACCAATCGTaGTCAGCATTCTTGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: HVAPPGGGYKLPLDCPKPSRNQS*SAFLLF Trigger: GAACAACAAGAATGCTGACAACGATTGGTTCCGACT...GGGCTTTGGACAATCTAGAGGTAATTTATATCCGCCCCCAGGTGGAGCAACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368003.6 |
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| CDS GCA 90 bp | TCCCTCCCGCCACGAAGTTCTTCCTTAAGGCTTTCTTTGACTCTTTaGCATCTCCTATTCAGTCCTACCTGTACATCTTTGCTGTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SLPPRSSSLRLSLTL*HLLFSPTCTSLLSF Trigger: GAAAGACAGCAAAGATGTACAGGTAGGACTGAATAGGAGATGGCAAAGAGTCAAAGAAAGCCTTAAGGAAGAACTTCGTGGCGGGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473766.5 |
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| CDS GCA 90 bp | CTTCGAAGAACTTTTCCTTTGCTTATATATAGTCCTGCCTCTAGATaGAGTTATCCTGTAGAAGGATGTTTAACTCCGCAACCTCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: LRRTFPLLIYSPASR*SYPVEGCLTPQPPP Trigger: AGGCGGAGGTTGCGGAGTTAAACATCCTTCTACAGGATAACTGCATCTAGAGGCAGGACTATATATAAGCAAAGGAAAAGTTCTTCGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467540.5 |
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| CDS CAA 72 bp | CTTGGACCAGGGCGCAAGAGAAACGCGGAAGTGGTGTaGCCTGTAGCTTACCTCAAGGCGCCGTCATCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LGPGRKRNAEVV*PVAYLKAPSSL Trigger: TAAAGATGACGGCGCCTTGAGGTAAGCTACAGGCAACACCACTTCCGCGTTTCTCTTGCGCCCTGGTCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467540.5 |
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| CDS GCA 72 bp | AGGGCAGCTTTGGTAGTGGGCGCTAGGATACCAAATTaGCTAACTCATATAAGACTCCCACCCCACACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RAALVVGARIPN*LTHIRLPPHTS Trigger: GGAGGTGTGGGGTGGGAGTCTTATATGAGTTAGGCAATTTGGTATCCTAGCGCCCACTACCAAAGCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482672.1 |
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| CDS CAA 90 bp | ATCCGCCATCTTGGACCAGGGCGCAAGAGAAACGCGGAAGTGGTGTaGCCTGTAGCTTACCTCAAGGCGCCGTCATCTTTATTCCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: IRHLGPGRKRNAEVV*PVAYLKAPSSLFLK Trigger: TTTTAGGAATAAAGATGACGGCGCCTTGAGGTAAGCTACAGGCAACACCACTTCCGCGTTTCTCTTGCGCCCTGGTCCAAGATGGCGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467540.5 |
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| CDS CAA 90 bp | CTGGCGCTGTGGGAGTGGAGACAGCTAACATGTGACAGGGCAGCTTaGGTAGTGGGCGCTAGGATACCAAATTGCCTAACTCATATAAGA | + |
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Preference number: 6 (lower is better) Translates to: LALWEWRQLTCDRAA*VVGARIPNCLTHIR Trigger: TCTTATATGAGTTAGGCAATTTGGTATCCTAGCGCCCACTACCAAAGCTGCCCTGTCACATGTTAGCTGTCTCCACTCCCACAGCGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482672.1 |
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| CDS CCA 72 bp | TCCCAAGAGGGTCTACCTACCGAGTTCCTTCCTTGTTaGACTCCAGTCGGAACCAATCGTTGTCAGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: SQEGLPTEFLPC*TPVGTNRCQHS Trigger: AGAATGCTGACAACGATTGGTTCCGACTGGAGTCCAACAAGGAAGGAACTCGGTAGGTAGACCCTCTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482672.1 |
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| CDS CCA 72 bp | AGTACTCAAATGATATCTTGGCTTAGGCCACCAGCCTaGGAGACTCATAGGATGGGAACTGGGGAACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: STQMISWLRPPA*ETHRMGTGELW Trigger: CCAGAGTTCCCCAGTTCCCATCCTATGAGTCTCCCAGGCTGGTGGCCTAAGCCAAGATATCATTTGAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482672.1 |
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| CDS CAA 72 bp | TGGGAGTGGAGACAGCTAACATGTGACAGGGCAGCTTaGGTAGTGGGCGCTAGGATACCAAATTGCCTAACT | + |
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Preference number: 6 (lower is better) Translates to: WEWRQLTCDRAA*VVGARIPNCLT Trigger: AGTTAGGCAATTTGGTATCCTAGCGCCCACTACCAAAGCTGCCCTGTCACATGTTAGCTGTCTCCACTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482672.1 |
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| CDS CAA 90 bp | CTCCCTCCCGCCACGAAGTTCTTCCTTAAGGCTTTCTTTGACTCTTaGCCATCTCCTATTCAGTCCTACCTGTACATCTTTGCTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LPPATKFFLKAFFDS*PSPIQSYLYIFAVF Trigger: AAAGACAGCAAAGATGTACAGGTAGGACTGAATAGGAGATGGCAAAGAGTCAAAGAAAGCCTTAAGGAAGAACTTCGTGGCGGGAGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473766.5 |
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| CDS GCA 72 bp | AGCGATTCGTGTTTCCTCTTCGAAGAACTTTTCCTTTaGTTATATATAGTCCTGCCTCTAGATGCAGTTATC | + |
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Preference number: 6 (lower is better) Translates to: SDSCFLFEELFL*LYIVLPLDAVI Trigger: GATAACTGCATCTAGAGGCAGGACTATATATAAGCAAAGGAAAAGTTCTTCGAAGAGGAAACACGAATCGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467540.5 |
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