RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UEVLD (Homo sapiens)

Ensembl gene IDs: ENSG00000151116

Ensembl transcript IDs: ENST00000300038.7, ENST00000320750.10, ENST00000379387.8, ENST00000396196.6, ENST00000396197.8, ENST00000535340.5, ENST00000535484.5, ENST00000539569.1, ENST00000540917.5, ENST00000541984.5, ENST00000543987.5

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGACACTGTGTTGACTATAATGTCCCAGAGCTGGGACAAGGGCTCTaGACATATCCACATTGCTCTGTACCACATCAAGGTACGACTGAG +
Preference number: 1 (lower is better)
Translates to: GHCVDYNVPELGQGL*TYPHCSVPHQGTTE
Trigger: CTCAGTCGTACCTTGATGTGGTACAGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAGCTCTGGGACATTATAGTCAACACAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR TCA 90 bp CTGTCAACCATGTCAGCTACTGATAGTCCAACAGACCAGGATCTTTaGCCTTTTACTCTTAGCAGTTCCATGGCTCTGTTGGACAGCTGC +
Preference number: 1 (lower is better)
Translates to: LSTMSATDSPTDQDL*PFTLSSSMALLDSC
Trigger: GCAGCTGTCCAACAGAGCCATGGAACTGCTAAGAGTAAAAGGTCAAAGATCCTGGTCTGTTGGACTATCAGTAGCTGACATGGTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR TCA 90 bp GCTCTGAACATATCCACATTGCTCTGTACCACATCAAGGTACGACTaGGAACTACCCAAAGAGTTGACTGTGAAGATCACCACCTTGGAA +
Preference number: 1 (lower is better)
Translates to: ALNISTLLCTTSRYD*ELPKELTVKITTLE
Trigger: TTCCAAGGTGGTGATCTTCACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAATGTGGATATGTTCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR TCA 90 bp CGTGCCTCATCAGATGATGATAGAGAATACATGGGAAGTTCCTCTTaGAACTTGGCAATCATTTCTTTAATTAATCCAACAATGACAGAT +
Preference number: 1 (lower is better)
Translates to: RASSDDDREYMGSSS*NLAIISLINPTMTD
Trigger: ATCTGTCATTGTTGGATTAATTAAAGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCATGTATTCTCTATCATCATCTGATGAGGCACG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR CAA 90 bp GGTCATGATTTCCACTGGTTGAGATGCAACGAGCAGGACACTGTGTaGACTATAATGTCCCAGAGCTGGGACAAGGGCTCTGAACATATC +
Preference number: 2 (lower is better)
Translates to: GHDFHWLRCNEQDTV*TIMSQSWDKGSEHI
Trigger: GATATGTTCAGAGCCCTTGTCCCAGCTCTGGGACATTATAGTCAACACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR GCA 90 bp CGATCTCTGCTCACTGCAAGCTCCACCTACCGGGTTCACGCCATTCTCTTGCCTATGAATGTTTACCCCTaGTGTAGATTTAAAGAACAG +
Preference number: 2 (lower is better)
Translates to: RSLLTASSTYRVHAILLPMNVYP*CRFKEQ
Trigger: CTGTTCTTTAAATCTACAGCAGGGGTAAACATTCAT...AGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
3UTR-3UTR GCA 90 bp ATACCCTTTGCTGAAATTGCTAATGTGCAGGCAATACCGAGTTCTCCACCTCCAGCTAGCAAGTCTACCTaGCGTGCCTCATCAGATGAT +
Preference number: 2 (lower is better)
Translates to: IPFAEIANVQAIPSSPPPASKST*RASSDD
Trigger: ATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGC...TGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR CCA 90 bp TTGAGATGCAACGAGCAGGACACTGTGTTGACTATAATGTCCCAGAGCTGGGACCTTCAGATACTCCATTaGTTCCAAGGATGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: LRCNEQDTVLTIMSQSWDLQILH*FQGCKA
Trigger: TGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG...GTCCCAGCTCTGGGACATTATAGTCAACACAGTGTCCTGCTCGTTGCATCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR TCA 90 bp CAACCATGTCAGCTACTGATAGTCCAACAGACCAGGATCTTTGACCTTTTACTCATGATTTCCACTGGTTaGGATGCAACGAGCAGGACA +
Preference number: 2 (lower is better)
Translates to: QPCQLLIVQQTRIFDLLLMISTG*DATSRT
Trigger: TGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCAT...GAGTAAAAGGTCAAAGATCCTGGTCTGTTGGACTATCAGTAGCTGACATGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR TCA 90 bp GTTCCATGGCTCTGTTGGACAGCTGCACTTGAGAGGTATGACTCACTACTTCTTATGTTACATAGGTCATaGTTTCCACTGGTTGAGATG +
Preference number: 2 (lower is better)
Translates to: VPWLCWTAALERYDSLLLMLHRS*FPLVEM
Trigger: CATCTCAACCAGTGGAAATCATGACCTATGTAACAT...AAGAAGTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR TCA 90 bp TTACAATACTGTCAACCATGTCAGCTACTGATAGTCCAACAGACCAGGATCTTTCTTGGCCACTCCATGTaGGCACTTTGTCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: LQYCQPCQLLIVQQTRIFLGHSM*ALCLLL
Trigger: AAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAG...AAAGATCCTGGTCTGTTGGACTATCAGTAGCTGACATGGTTGACAGTATTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR TCA 90 bp AGCATTAGTTTGCCTATTTCCTCTTTACTAGGATGTGTCTGCCCTTATAAACCCGATGCACACTGCAGATaGATGTTTACCCCTGCTGTA +
Preference number: 2 (lower is better)
Translates to: SISLPISSLLGCVCPYKPDAHCR*MFTPAV
Trigger: TACAGCAGGGGTAAACATTCATCTGCAGTGTGCATC...GGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
3UTR-3UTR GCA 90 bp ATTGCTCTGTACCACATCAAGGTACGACTGAGAACTACCCAAAGAGTTGACTGTCTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTC +
Preference number: 2 (lower is better)
Translates to: IALYHIKVRLRTTQRVDCLKLLM*RQYRVL
Trigger: GAGAACTCGGTATTGCCTGCACATTAGCAATTTCAG...ACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATTTGGAGACTGTGGATTaGGGATGCACTGCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYLETVD*GCTALE
Trigger: CTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAA...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
3UTR-3UTR GCA 90 bp GGCCTTCCAGAGGGCAAAGACTATTATTCATCTTCGAATAGTCAAATTCTAACATTGCCTAGGCTGGAGTaGAGTAGCATGATCATAGCT +
Preference number: 2 (lower is better)
Translates to: GLPEGKDYYSSSNSQILTLPRLE*SSMIIA
Trigger: AGCTATGATCATGCTACTGCACTCCAGCCTAGGCAA...TGTTAGAATTTGACTATTCGAAGATGAATAATAGTCTTTGCCCTCTGGAAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
3UTR-3UTR CCA 90 bp TGTACTCAGTTTCCATGTTACATAGGTCATGATTTCCACTGGTTGAGATGCAACTGTTGTTGGAGACTGTaGATTGAGGATGCACTGCTT +
Preference number: 2 (lower is better)
Translates to: CTQFPCYIGHDFHWLRCNCCWRL*IEDALL
Trigger: AAGCAGTGCATCCTCAATCCACAGTCTCCAACAACA...GTTGCATCTCAACCAGTGGAAATCATGACCTATGTAACATGGAAACTGAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR TCA 90 bp CCATGTCAGCTACTGATAGTCCAACAGACCAGGATCTTTGACCTTTTACTCTTAATGGGAAGTTCCTCTTaGAACTTGGCAATCATTTCT +
Preference number: 2 (lower is better)
Translates to: PCQLLIVQQTRIFDLLLLMGSSS*NLAIIS
Trigger: AGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCAT...TAAGAGTAAAAGGTCAAAGATCCTGGTCTGTTGGACTATCAGTAGCTGACATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR CAA 90 bp CTGCTTTGGAGTTTCTCAGTAACTGTATCTTCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: LLWSFSVTVSSFSVV*ITSDTPLVPRMQGK
Trigger: TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAAGAAGATACAGTTACTGAGAAACTCCAAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
3UTR-3UTR CCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATAGTTTTAACTGTTGTTaGAGACTGTGGATTGAGGAT +
Preference number: 2 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYSFNCC*RLWIED
Trigger: ATCCTCAATCCACAGTCTCCAACAACAGTTAAAACT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
3UTR CAA 90 bp ACTGTATCTTCTTTCAGTGTGGTTTTGATAACTTCAGATACTCCATaGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATTT +
Preference number: 2 (lower is better)
Translates to: TVSSFSVVLITSDTP*VPRMQGKLKNTSLF
Trigger: AAATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAAGAAGATACAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR GCA 72 bp GCCTGTCTGCAATACCCTTTGCTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTCCACCTCCAACCACAG +
Preference number: 3 (lower is better)
Translates to: ACLQYPLLKLLM*RQYRVLHLQPQ
Trigger: CTGTGGTTGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTATTGCAGACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR CAA 90 bp TACCCTTTGCTGAAATTGCTAATGTGCAGGCAATACCGAGTTCTCCACCTCCAACCCAGCTCTTTGAATTaGTATCTGAAACACCTTCAG +
Preference number: 3 (lower is better)
Translates to: YPLLKLLMCRQYRVLHLQPSSLN*YLKHLQ
Trigger: CTGAAGGTGTTTCAGATACAAATTCAAAGAGCTGGG...TTGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR CAA 90 bp TCCACATTAGGAAGGTTGAAGATTTCAAGGTCCATCGTGGCTCCTTTAGTCCCTTGTCTGCAATACCCTTaGCTGAAATTGCTAATGTGC +
Preference number: 3 (lower is better)
Translates to: STLGRLKISRSIVAPLVPCLQYP*LKLLMC
Trigger: GCACATTAGCAATTTCAGCAAAGGGTATTGCAGACA...AGGGACTAAAGGAGCCACGATGGACCTTGAAATCTTCAACCTTCCTAATGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR TCA 72 bp ATATCCACATTGCTCTGTACCACATCAAGGTACGACTaGGAACTACCCAAAGAGTTGACTGTGAAGATCACC +
Preference number: 3 (lower is better)
Translates to: ISTLLCTTSRYD*ELPKELTVKIT
Trigger: GGTGATCTTCACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAATGTGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR CCA 72 bp CCTGCCGTGCCTCATCAGATGATGATAGAGAATACATaGGAAGTTCCTCTTGAAACTTGGCAATCATTTCTT +
Preference number: 3 (lower is better)
Translates to: PAVPHQMMIENT*EVPLETWQSFL
Trigger: AAGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCATGTATTCTCTATCATCATCTGATGAGGCACGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATGTTGGAGACTGTGGATaGAGGATGCACTGCTTTGGA +
Preference number: 3 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYVGDCG*RMHCFG
Trigger: TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAAC...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
3UTR-3UTR CAA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAGTTGGAGACTGTGGATaGAGGATGCACTGCTTTGGA +
Preference number: 3 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKVGDCG*RMHCFG
Trigger: TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAAC...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
3UTR-3UTR CAA 90 bp ATTGCTCTGTACCACATCAAGGTACGACTGAGAACTACCCAAAGAGTTGACTGTTCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCA +
Preference number: 3 (lower is better)
Translates to: IALYHIKVRLRTTQRVDCSFSVV*ITSDTP
Trigger: TGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA...ACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR TCA 72 bp TTCTCCTTGCTCGCCAATAACCCATACTTCTTTGCCTaGAGTCTGTGCCTTCAAAACATTTGTAATAATATA +
Preference number: 3 (lower is better)
Translates to: FSLLANNPYFFA*SLCLQNICNNI
Trigger: TATATTATTACAAATGTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTATTGGCGAGCAAGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
3UTR-3UTR CAA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTTCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCA +
Preference number: 3 (lower is better)
Translates to: DLHHKANQETLYFNQAVCSFSVV*ITSDTP
Trigger: TGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
3UTR TCA 72 bp TTTGCTTATGGTTCCACTAATATCACAATTAGTTTATaGGATGTTGGAGATCTTGTAATACTCCAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: FAYGSTNITISL*DVGDLVILQEE
Trigger: CTCTTCCTGGAGTATTACAAGATCTCCAACATCTCATAAACTAATTGTGATATTAGTGGAACCATAAGCAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396197.8
ENST00000543987.5
CDS-3UTR GCA 90 bp CGATCTCTGCTCACTGCAAGCTCCACCTACCGGGTTCACGCCATTCTCTTGCCTGCTAGCAAGTCTACCTaGCGTGCCTCATCAGATGAT +
Preference number: 4 (lower is better)
Translates to: RSLLTASSTYRVHAILLPASKST*RASSDD
Trigger: ATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGC...AGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
3UTR CAA 72 bp TTCCACTGGTTGAGATGCAACGAGCAGGACACTGTGTaGACTATAATGTCCCAGAGCTGGGACAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FHWLRCNEQDTV*TIMSQSWDKGS
Trigger: AGAGCCCTTGTCCCAGCTCTGGGACATTATAGTCAACACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR GCA 90 bp CGATCTCTGCTCACTGCAAGCTCCACCTACCGGGTTCACGCCATTCTCTTGCCTAGGGCAAATATATTCTaGCTTGAGCATCCACATGTT +
Preference number: 4 (lower is better)
Translates to: RSLLTASSTYRVHAILLPRANIF*LEHPHV
Trigger: AACATGTGGATGCTCAAGGCAGAATATATTTGCCCT...AGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR GCA 90 bp GGCCTTCCAGAGGGCAAAGACTATTATTCATCTTCGAATAGTCAAATTCTAACACCTGACCTCGTGATCTaGCCGCCTCAGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: GLPEGKDYYSSSNSQILTPDLVI*PPQPPK
Trigger: CTTGGGAGGCTGAGGCGGGCAGATCACGAGGTCAGG...TGTTAGAATTTGACTATTCGAAGATGAATAATAGTCTTTGCCCTCTGGAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR TCA 90 bp CACATCAAGGTACGACTGAGAACTACCCAAAGAGTTGACTGTGAAGATCACCACCTTGGCCACTCCATGTaGGCACTTTGTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HIKVRLRTTQRVDCEDHHLGHSM*ALCLLL
Trigger: AAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAG...GTGGTGATCTTCACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR GCA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAAACCTTCTTCCGGACTTaGTGCAGGACGGAAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKTFFRT*CRTEAA
Trigger: AGCGGCTTCCGTCCTGCAGCAAGTCCGGAAGAAGGT...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543987.5
CDS-3UTR GCA 90 bp GTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTTTCTTCCGGACTTGCTaGAGGACGGAAGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: VVLITSDTPLVPRMQGKLFFRTC*RTEAAE
Trigger: CTCAGCGGCTTCCGTCCTGCAGCAAGTCCGGAAGAA...AAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543987.5
CDS-3UTR CCA 90 bp TTAGCAGTTCCATGGCTCTGTTGGACAGCTGCACTTGAGAGGTATGACTCACTAGGTCATGATTTCCACTaGTTGAGATGCAACGAGCAG +
Preference number: 4 (lower is better)
Translates to: LAVPWLCWTAALERYDSLGHDFH*LRCNEQ
Trigger: CTGCTCGTTGCATCTCAACCAGTGGAAATCATGACC...TAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAACTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR TCA 90 bp CAACCATGTCAGCTACTGATAGTCCAACAGACCAGGATCTTTGACCTTTTACTCTTGGAGACTGTGGATTaGGGATGCACTGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QPCQLLIVQQTRIFDLLLLETVD*GCTALE
Trigger: CTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAA...GAGTAAAAGGTCAAAGATCCTGGTCTGTTGGACTATCAGTAGCTGACATGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR GCA 90 bp CTGTACCACATCAAGGTACGACTGAGAACTACCCAAAGAGTTGACTGTGAAGATGCTAGCAAGTCTACCTaGCGTGCCTCATCAGATGAT +
Preference number: 4 (lower is better)
Translates to: LYHIKVRLRTTQRVDCEDASKST*RASSDD
Trigger: ATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGC...ATCTTCACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTGGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR GCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTTCGCCCAGGCTGGAGTaGAGTGGCGCGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSSPRLE*SGAISA
Trigger: AGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCGA...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR TCA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAGGGGGAGCGAAAGGGTaGGAATCCAAAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQGGAKG*ESKIQK
Trigger: TTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCC...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCGGGGGAGCGAAAGGGTaGGAATCCAAAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGGGAKG*ESKIQK
Trigger: TTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCC...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CACATCAAGGTACGACTGAGAACTACCCAAAGAGTTGACTGTGAAGATCACCACACATCAAGGTACGACTaGGAACTACCCAAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: HIKVRLRTTQRVDCEDHHTSRYD*ELPKEL
Trigger: CAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGT...GTGGTGATCTTCACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR TCA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAACTGGGACAAGGGCTCTaGACATATCCACATTGCTCT +
Preference number: 4 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQLGQGL*TYPHCS
Trigger: AGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAG...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TACCCTTTGCTGAAATTGCTAATGTGCAGGCAATACCGAGTTCTCCACCTCCAACCATACTTCTTTGCCTaGAGTCTGTGCCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: YPLLKLLMCRQYRVLHLQPYFFA*SLCLQN
Trigger: GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGG...TTGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR TCA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAACTTGGCCACTCCATGTaGGCACTTTGTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQLGHSM*ALCLLL
Trigger: AAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAG...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAATTGGAGACTGTGGATTaGGGATGCACTGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQLETVD*GCTALE
Trigger: CTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAA...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp GTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTCCACAGTTAGGTCCCTaGACTTGTACTCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: VVLITSDTPLVPRMQGKLPQLGP*TCTPDS
Trigger: GCTGTCTGGAGTACAAGTTCAGGGACCTAACTGTGG...AAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535484.5
CDS-3UTR GCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAACCTTCTTCCGGACTTaGTGCAGGACGGAAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKTFFRT*CRTEAA
Trigger: AGCGGCTTCCGTCCTGCAGCAAGTCCGGAAGAAGGT...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396197.8
ENST00000543987.5
CDS-3UTR GCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAGCGATCTCTGCTCACTaGAAGCTCCACCTACCGGGT +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKAISAH*KLHLPG
Trigger: ACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCGC...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CCA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAAGTTCCATGGCTCTGTTaGACAGCTGCACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKVPWLC*TAALER
Trigger: CCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAAC...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR TCA 90 bp ATCAAAGTTTTAACTGTTGTTGGAGACTGTGGATTGAGGATGCACTGCTTTGGACTGGGACAAGGGCTCTaGACATATCCACATTGCTCT +
Preference number: 4 (lower is better)
Translates to: IKVLTVVGDCGLRMHCFGLGQGL*TYPHCS
Trigger: AGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAG...TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCGATGCACACTGCAGATaGATGTTTACCCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGDAHCR*MFTPAV
Trigger: TACAGCAGGGGTAAACATTCATCTGCAGTGTGCATC...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTCCTGCCTCACCCTCCTaGGTAGCTGGAACTACAGGT +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCPASPS*VAGTTG
Trigger: ACCTGTAGTTCCAGCTACTCAGGAGGGTGAGGCAGG...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR GCA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAAGCTAGCAAGTCTACCTaGCGTGCCTCATCAGATGAT +
Preference number: 4 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKASKST*RASSDD
Trigger: ATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGC...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp CACATCAAGGTACGACTGAGAACTACCCAAAGAGTTGACTGTGAAGATCACCACCTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: HIKVRLRTTQRVDCEDHHLKLLM*RQYRVL
Trigger: GAGAACTCGGTATTGCCTGCACATTAGCAATTTCAG...GTGGTGATCTTCACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR GCA 90 bp ATCAAAGTTTTAACTGTTGTTGGAGACTGTGGATTGAGGATGCACTGCTTTGGATTCCACTGGTTGAGATaGAACGAGCAGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: IKVLTVVGDCGLRMHCFGFHWLR*NEQDTV
Trigger: CACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAA...TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp AGCATTAGTTTGCCTATTTCCTCTTTACTAGGATGTGTCTGCCCTTATAAACCCTTCCACTGGTTGAGATaGAACGAGCAGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: SISLPISSLLGCVCPYKPFHWLR*NEQDTV
Trigger: CACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAA...GGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR GCA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTTCCACTGGTTGAGATaGAACGAGCAGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTFHWLR*NEQDTV
Trigger: CACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAA...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp GTTCCATGGCTCTGTTGGACAGCTGCACTTGAGAGGTATGACTCACTACTTCTTTCCGATCACTCGATTTaGAGGAAATGTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VPWLCWTAALERYDSLLLSDHSI*RKCTQF
Trigger: AAACTGAGTACATTTCCTGCAAATCGAGTGATCGGA...AAGAAGTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR GCA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACCCCTCTCACCACTATaGAGGATCCAACCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKPLSPL*RIQPSF
Trigger: AAAAGACGGTTGGATCCTGCATAGTGGTGAGAGGGG...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535484.5
CDS-3UTR CCA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTCTTAGCAGTTCCATaGCTCTGTTGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKLLAVP*LCWTAA
Trigger: TGCAGCTGTCCAACAGAGCCATGGAACTGCTAAGAG...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGAGCCTTCCGAGTAGCTaGGACTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKSLPSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAGTCCCAGCTACTCGGAAGGCT...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CCA 90 bp AGCATTAGTTTGCCTATTTCCTCTTTACTAGGATGTGTCTGCCCTTATAAACCCACCCTCCTGAGTAGCTaGAACTACAGGTGCACATCA +
Preference number: 4 (lower is better)
Translates to: SISLPISSLLGCVCPYKPTLLSS*NYRCTS
Trigger: TGATGTGCACCTGTAGTTCCAGCTACTCAGGAGGGT...GGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
3UTR CAA 72 bp GCAGACAAATCTTTGCTGATCTCCACATTAGGAAGGTaGAAGATTTCAAGGTCCATCGTGGCTCCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: ADKSLLISTLGR*KISRSIVAPLV
Trigger: GACTAAAGGAGCCACGATGGACCTTGAAATCTTCAACCTTCCTAATGTGGAGATCAGCAAAGATTTGTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR TCA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACATCAAGGTACGACTaGGAACTACCCAAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQTSRYD*ELPKEL
Trigger: CAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGT...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTGGGACAAGGGCTCTaGACATATCCACATTGCTCT +
Preference number: 4 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSLGQGL*TYPHCS
Trigger: AGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAG...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAAATGATTTCCACTGGTTaGGATGCAACGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKMISTG*DATSRT
Trigger: TGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCAT...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAACCATACTTCTTTGCCTaGAGTCTGTGCCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQPYFFA*SLCLQN
Trigger: GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGG...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTTGGCCACTCCATGTaGGCACTTTGTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSLGHSM*ALCLLL
Trigger: AAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAG...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCATTGGAGACTGTGGATTaGGGATGCACTGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSLETVD*GCTALE
Trigger: CTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAA...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ATCAAAGTTTTAACTGTTGTTGGAGACTGTGGATTGAGGATGCACTGCTTTGGAGATGCACACTGCAGATaGATGTTTACCCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: IKVLTVVGDCGLRMHCFGDAHCR*MFTPAV
Trigger: TACAGCAGGGGTAAACATTCATCTGCAGTGTGCATC...TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATTTCCACTGGTTGAGATaGAACGAGCAGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: QILHWFQGCKANLKTLHYFHWLR*NEQDTV
Trigger: CACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAA...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp AGCATTAGTTTGCCTATTTCCTCTTTACTAGGATGTGTCTGCCCTTATAAACCCGGTCATGATTTCCACTaGTTGAGATGCAACGAGCAG +
Preference number: 4 (lower is better)
Translates to: SISLPISSLLGCVCPYKPGHDFH*LRCNEQ
Trigger: CTGCTCGTTGCATCTCAACCAGTGGAAATCATGACC...GGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CCA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAAGGTCATGATTTCCACTaGTTGAGATGCAACGAGCAG +
Preference number: 4 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKGHDFH*LRCNEQ
Trigger: CTGCTCGTTGCATCTCAACCAGTGGAAATCATGACC...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCCTTCAGATACTCCATTaGTTCCAAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGLQILH*FQGCKA
Trigger: TGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CCA 90 bp GCAGAGGCAGACAAATCTTTGCTGATCTCCACATTAGGAAGGTTGAAGATTTCATGTTGTTGGAGACTGTaGATTGAGGATGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: AEADKSLLISTLGRLKISCCWRL*IEDALL
Trigger: AAGCAGTGCATCCTCAATCCACAGTCTCCAACAACA...TGAAATCTTCAACCTTCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATGTTCCATGGCTCTGTTaGACAGCTGCACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYVPWLC*TAALER
Trigger: CCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAAC...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379387.8
ENST00000396197.8
CDS-3UTR TCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAGGGGGAGCGAAAGGGTaGGAATCCAAAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKGGAKG*ESKIQK
Trigger: TTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCC...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTGGGGGAGCGAAAGGGTaGGAATCCAAAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTGGAKG*ESKIQK
Trigger: TTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCC...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTACATCAAGGTACGACTaGGAACTACCCAAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTTSRYD*ELPKEL
Trigger: CAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGT...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp AGCATTAGTTTGCCTATTTCCTCTTTACTAGGATGTGTCTGCCCTTATAAACCCACATCAAGGTACGACTaGGAACTACCCAAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SISLPISSLLGCVCPYKPTSRYD*ELPKEL
Trigger: CAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGT...GGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTGGGACAAGGGCTCTaGACATATCCACATTGCTCT +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYLGQGL*TYPHCS
Trigger: AGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAG...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACCTGGGACAAGGGCTCTaGACATATCCACATTGCTCT +
Preference number: 4 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNLGQGL*TYPHCS
Trigger: AGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAG...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATATGATTTCCACTGGTTaGGATGCAACGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: QILHWFQGCKANLKTLHYMISTG*DATSRT
Trigger: TGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCAT...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAACTTGGCCACTCCATGTaGGCACTTTGTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKLGHSM*ALCLLL
Trigger: AAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAG...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTTGGCCACTCCATGTaGGCACTTTGTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYLGHSM*ALCLLL
Trigger: AAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAG...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTAGATGCACACTGCAGATaGATGTTTACCCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLDAHCR*MFTPAV
Trigger: TACAGCAGGGGTAAACATTCATCTGCAGTGTGCATC...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAAAAGTGTGTGTACTCTaGACTGTATCATCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQKVCVL*TVSSGE
Trigger: CTCTCCTGATGATACAGTTCAGAGTACACACACTTT...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543987.5
CDS-3UTR GCA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAGCTAGCAAGTCTACCTaGCGTGCCTCATCAGATGAT +
Preference number: 4 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKASKST*RASSDD
Trigger: ATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGC...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAATTCCACTGGTTGAGATaGAACGAGCAGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKFHWLR*NEQDTV
Trigger: CACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAA...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTAGGTCATGATTTCCACTaGTTGAGATGCAACGAGCAG +
Preference number: 4 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLGHDFH*LRCNEQ
Trigger: CTGCTCGTTGCATCTCAACCAGTGGAAATCATGACC...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TTTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCTTCAGATACTCCATTaGTTCCAAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: FQCGFDNFRYSIGSKDARLQILH*FQGCKA
Trigger: TGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG...CCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ATCAAAGTTTTAACTGTTGTTGGAGACTGTGGATTGAGGATGCACTGCTTTGGACTTCAGATACTCCATTaGTTCCAAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: IKVLTVVGDCGLRMHCFGLQILH*FQGCKA
Trigger: TGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG...TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ATCAAAGTTTTAACTGTTGTTGGAGACTGTGGATTGAGGATGCACTGCTTTGGATGTTGTTGGAGACTGTaGATTGAGGATGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: IKVLTVVGDCGLRMHCFGCCWRL*IEDALL
Trigger: AAGCAGTGCATCCTCAATCCACAGTCTCCAACAACA...TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTGTTCCATGGCTCTGTTaGACAGCTGCACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSVPWLC*TAALER
Trigger: CCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAAC...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379387.8
ENST00000396197.8
CDS-3UTR CCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAACTCTTAGCAGTTCCATaGCTCTGTTGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKLLAVP*LCWTAA
Trigger: TGCAGCTGTCCAACAGAGCCATGGAACTGCTAAGAG...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379387.8
ENST00000396197.8
CDS-3UTR TCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGGGGGGAGCGAAAGGGTaGGAATCCAAAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKGGAKG*ESKIQK
Trigger: TTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCC...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTCTGGGACAAGGGCTCTaGACATATCCACATTGCTCT +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSLGQGL*TYPHCS
Trigger: AGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAG...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATATGATTTCCACTGGTTaGGATGCAACGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYMISTG*DATSRT
Trigger: TGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCAT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAATGATTTCCACTGGTTaGGATGCAACGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKMISTG*DATSRT
Trigger: TGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCAT...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAATGTTACATAGGTCATaGTTTCCACTGGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQMLHRS*FPLVEM
Trigger: CATCTCAACCAGTGGAAATCATGACCTATGTAACAT...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTACCATACTTCTTTGCCTaGAGTCTGTGCCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLPYFFA*SLCLQN
Trigger: GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGG...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGTTGGAGACTGTGGATTaGGGATGCACTGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKLETVD*GCTALE
Trigger: CTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAA...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTTTGGAGACTGTGGATTaGGGATGCACTGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCLETVD*GCTALE
Trigger: CTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAA...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTTTGGAGACTGTGGATTaGGGATGCACTGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSLETVD*GCTALE
Trigger: CTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAA...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATGATGCACACTGCAGATaGATGTTTACCCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYDAHCR*MFTPAV
Trigger: TACAGCAGGGGTAAACATTCATCTGCAGTGTGCATC...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCGCTGCCTGGTATATATaGAGTGTTGATGTTAACTGT +
Preference number: 4 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGAAWYI*SVDVNC
Trigger: ACAGTTAACATCAACACTTCATATATACCAGGCAGC...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543987.5
CDS-3UTR TCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTGGGAGGTGGTGGTGGTaGTATTGCTTCTTGACTTAC +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSGRWWW*YCFLTY
Trigger: GTAAGTCAAGAAGCAATATCACCACCACCACCTCCC...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR GCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTGCTAGCAAGTCTACCTaGCGTGCCTCATCAGATGAT +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCASKST*RASSDD
Trigger: ATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGC...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTGCTAGCAAGTCTACCTaGCGTGCCTCATCAGATGAT +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSASKST*RASSDD
Trigger: ATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGC...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp GTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTCTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VVLITSDTPLVPRMQGKLLKLLM*RQYRVL
Trigger: GAGAACTCGGTATTGCCTGCACATTAGCAATTTCAG...AAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR GCA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTCTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTLKLLM*RQYRVL
Trigger: GAGAACTCGGTATTGCCTGCACATTAGCAATTTCAG...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR GCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTTTCCACTGGTTGAGATaGAACGAGCAGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCFHWLR*NEQDTV
Trigger: CACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAA...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACATAATGTCCCAGAGCTaGGACAAGGGCTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNIMSQS*DKGSEH
Trigger: ATGTTCAGAGCCCTTGTCCCAGCTCTGGGACATTAT...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAATAATGTCCCAGAGCTaGGACAAGGGCTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKIMSQS*DKGSEH
Trigger: ATGTTCAGAGCCCTTGTCCCAGCTCTGGGACATTAT...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTGGTCATGATTTCCACTaGTTGAGATGCAACGAGCAG +
Preference number: 4 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTGHDFH*LRCNEQ
Trigger: CTGCTCGTTGCATCTCAACCAGTGGAAATCATGACC...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTCTCTTAGCAGTTCCATaGCTCTGTTGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCLLAVP*LCWTAA
Trigger: TGCAGCTGTCCAACAGAGCCATGGAACTGCTAAGAG...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379387.8
ENST00000396197.8
CDS-3UTR CCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAGCAATCTTGAACTTCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKAILNF*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCAGAAGTTCAAGATTGC...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CCA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACAATGATGAGGCAGAATaGATCACCCCTCTCACCACT +
Preference number: 4 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNNDEAE*ITPLTT
Trigger: AGTGGTGAGAGGGGTGATCCATTCTGCCTCATCATT...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535484.5
CDS-3UTR TCA 90 bp AGCATTAGTTTGCCTATTTCCTCTTTACTAGGATGTGTCTGCCCTTATAAACCCAAATATATTCTGCCTTaGGCATCCACATGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: SISLPISSLLGCVCPYKPKYILP*ASTCFP
Trigger: CGGAAAACATGTGGATGCTCAAGGCAGAATATATTT...GGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR TCA 90 bp ATCAAAGTTTTAACTGTTGTTGGAGACTGTGGATTGAGGATGCACTGCTTTGGAAAATATATTCTGCCTTaGGCATCCACATGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: IKVLTVVGDCGLRMHCFGKYILP*ASTCFP
Trigger: CGGAAAACATGTGGATGCTCAAGGCAGAATATATTT...TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGATGGGAAGTTCCTCTTaGAACTTGGCAATCATTTCT +
Preference number: 4 (lower is better)
Translates to: FQCGFDNFRYSIGSKDARMGSSS*NLAIIS
Trigger: AGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCAT...CCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGATGATTTCCACTGGTTaGGATGCAACGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKMISTG*DATSRT
Trigger: TGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCAT...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTCCATACTTCTTTGCCTaGAGTCTGTGCCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTPYFFA*SLCLQN
Trigger: GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGG...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCCATACTTCTTTGCCTaGAGTCTGTGCCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYPYFFA*SLCLQN
Trigger: GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGG...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp GAGGATGCACTGCTTTGGAGTTTCTCAGTAACTGTATCTTCTTTCAGTGTGGTTCTCAGTGGTCTGTTGTaGGGATTCAGTAAAATAATA +
Preference number: 4 (lower is better)
Translates to: EDALLWSFSVTVSSFSVVLSGLL*GFSKII
Trigger: TATTATTTTACTGAATCCTCACAACAGACCACTGAG...AACCACACTGAAAGAAGATACAGTTACTGAGAAACTCCAAAGCAGTGCATCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543987.5
CDS-3UTR GCA 90 bp GTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAGGGCAAATATATTCTaGCTTGAGCATCCACATGTT +
Preference number: 4 (lower is better)
Translates to: VVLITSDTPLVPRMQGKLRANIF*LEHPHV
Trigger: AACATGTGGATGCTCAAGGCAGAATATATTTGCCCT...AAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp TTTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGAGGGCAAATATATTCTaGCTTGAGCATCCACATGTT +
Preference number: 4 (lower is better)
Translates to: FQCGFDNFRYSIGSKDARRANIF*LEHPHV
Trigger: AACATGTGGATGCTCAAGGCAGAATATATTTGCCCT...CCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGTTGCCTAGGCTGGAGTaGAGTAGCATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKLPRLE*SSMIIA
Trigger: AGCTATGATCATGCTACTGCACTCCAGCCTAGGCAA...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CCA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTCCCATATTTGCAGTTaGCTTCAAGAAGCAAATAGG +
Preference number: 4 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTSHICS*LQEANR
Trigger: CCTATTTGCTTCTTGAAGCCAACTGCAAATATGGGA...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGGGTCATGATTTCCACTaGTTGAGATGCAACGAGCAG +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKGHDFH*LRCNEQ
Trigger: CTGCTCGTTGCATCTCAACCAGTGGAAATCATGACC...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTTCAGATACTCCATTaGTTCCAAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYLQILH*FQGCKA
Trigger: TGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAACTTCAGATACTCCATTaGTTCCAAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKLQILH*FQGCKA
Trigger: TGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CCA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAATGTTGTTGGAGACTGTaGATTGAGGATGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKCCWRL*IEDALL
Trigger: AAGCAGTGCATCCTCAATCCACAGTCTCCAACAACA...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAATGTTGTTGGAGACTGTaGATTGAGGATGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKCCWRL*IEDALL
Trigger: AAGCAGTGCATCCTCAATCCACAGTCTCCAACAACA...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATTGTTGTTGGAGACTGTaGATTGAGGATGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYCCWRL*IEDALL
Trigger: AAGCAGTGCATCCTCAATCCACAGTCTCCAACAACA...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
3UTR CAA 72 bp TTGTCTTCTCCTTGCTCGCCAATAACCCATACTTCTTaGCCTGAAGTCTGTGCCTTCAAAACATTTGTAATA +
Preference number: 4 (lower is better)
Translates to: LSSPCSPITHTS*PEVCAFKTFVI
Trigger: TATTACAAATGTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTATTGGCGAGCAAGGAGAAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR TCA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCAAAATATATTCTGCCTTaGGCATCCACATGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSKYILP*ASTCFP
Trigger: CGGAAAACATGTGGATGCTCAAGGCAGAATATATTT...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATAAATATATTCTGCCTTaGGCATCCACATGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: QILHWFQGCKANLKTLHYKYILP*ASTCFP
Trigger: CGGAAAACATGTGGATGCTCAAGGCAGAATATATTT...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTAATGGGAAGTTCCTCTTaGAACTTGGCAATCATTTCT +
Preference number: 4 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLMGSSS*NLAIIS
Trigger: AGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCAT...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTACATCAAGGTACGACTaGGAACTACCCAAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCTSRYD*ELPKEL
Trigger: CAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGT...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGACATCAAGGTACGACTaGGAACTACCCAAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKTSRYD*ELPKEL
Trigger: CAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGT...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGCCATACTTCTTTGCCTaGAGTCTGTGCCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKPYFFA*SLCLQN
Trigger: GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGG...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTCCATACTTCTTTGCCTaGAGTCTGTGCCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSPYFFA*SLCLQN
Trigger: GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGG...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAAAAGTGTGTGTACTCTaGACTGTATCATCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKKVCVL*TVSSGE
Trigger: CTCTCCTGATGATACAGTTCAGAGTACACACACTTT...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396197.8
ENST00000543987.5
CDS-3UTR TCA 90 bp GGCCTTCCAGAGGGCAAAGACTATTATTCATCTTCGAATAGTCAAATTCTAACAGCTGCCTGGTATATATaGAGTGTTGATGTTAACTGT +
Preference number: 4 (lower is better)
Translates to: GLPEGKDYYSSSNSQILTAAWYI*SVDVNC
Trigger: ACAGTTAACATCAACACTTCATATATACCAGGCAGC...TGTTAGAATTTGACTATTCGAAGATGAATAATAGTCTTTGCCCTCTGGAAGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR TCA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACGTATCTGAAACACCCTaGTACATCACAGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNVSETP*YITGIV
Trigger: CACAATTCCTGTGATGTATCAGGGTGTTTCAGATAC...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541984.5
CDS-3UTR GCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYLKLLM*RQYRVL
Trigger: GAGAACTCGGTATTGCCTGCACATTAGCAATTTCAG...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAACTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKLKLLM*RQYRVL
Trigger: GAGAACTCGGTATTGCCTGCACATTAGCAATTTCAG...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCATCCGATCACTCGATTTaGAGGAAATGTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSSDHSI*RKCTQF
Trigger: AAACTGAGTACATTTCCTGCAAATCGAGTGATCGGA...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTCTTCAGATACTCCATTaGTTCCAAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCLQILH*FQGCKA
Trigger: TGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTCTTCAGATACTCCATTaGTTCCAAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSLQILH*FQGCKA
Trigger: TGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TTTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGAGTTTTAACTGTTGTTaGAGACTGTGGATTGAGGAT +
Preference number: 4 (lower is better)
Translates to: FQCGFDNFRYSIGSKDARSFNCC*RLWIED
Trigger: ATCCTCAATCCACAGTCTCCAACAACAGTTAAAACT...CCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAATTACTTCTACATTGTaGCCTTCCAGAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKITSTL*PSRGQR
Trigger: TCTTTGCCCTCTGGAAGGCCACAATGTAGAAGTAAT...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATAAATATATTCTGCCTTaGGCATCCACATGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYKYILP*ASTCFP
Trigger: CGGAAAACATGTGGATGCTCAAGGCAGAATATATTT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAATGGGAAGTTCCTCTTaGAACTTGGCAATCATTTCT +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKMGSSS*NLAIIS
Trigger: AGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCAT...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp GATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATTTATGGGAAGTTCCTCTTaGAACTTGGCAATCATTTCT +
Preference number: 4 (lower is better)
Translates to: DTPLVPRMQGKLKNTSLFMGSSS*NLAIIS
Trigger: AGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCAT...AAATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATATGGGAAGTTCCTCTTaGAACTTGGCAATCATTTCT +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYMGSSS*NLAIIS
Trigger: AGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCAT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTATGTTACATAGGTCATaGTTTCCACTGGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTMLHRS*FPLVEM
Trigger: CATCTCAACCAGTGGAAATCATGACCTATGTAACAT...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACATGTTACATAGGTCATaGTTTCCACTGGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNMLHRS*FPLVEM
Trigger: CATCTCAACCAGTGGAAATCATGACCTATGTAACAT...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATATGTTACATAGGTCATaGTTTCCACTGGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYMLHRS*FPLVEM
Trigger: CATCTCAACCAGTGGAAATCATGACCTATGTAACAT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAGGTGATATTGCTTCTTaGCTTACACTGGGATTTACA +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKGDIAS*LTLGFT
Trigger: TGTAAATCCCAGTGTAAGTCAAGAAGCAATATCACC...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR GCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAAGGGCAAATATATTCTaGCTTGAGCATCCACATGTT +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKRANIF*LEHPHV
Trigger: AACATGTGGATGCTCAAGGCAGAATATATTTGCCCT...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTCTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCLKLLM*RQYRVL
Trigger: GAGAACTCGGTATTGCCTGCACATTAGCAATTTCAG...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCCGATCACTCGATTTaGAGGAAATGTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTSDHSI*RKCTQF
Trigger: AAACTGAGTACATTTCCTGCAAATCGAGTGATCGGA...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR GCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATTCCGATCACTCGATTTaGAGGAAATGTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYSDHSI*RKCTQF
Trigger: AAACTGAGTACATTTCCTGCAAATCGAGTGATCGGA...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAATCCGATCACTCGATTTaGAGGAAATGTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKSDHSI*RKCTQF
Trigger: AAACTGAGTACATTTCCTGCAAATCGAGTGATCGGA...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGGGTTGTATGGATAAGTaGCCCTTAATAGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKGCMDK*PLIAKT
Trigger: AGTCTTGGCTATTAAGGGGCACTTATCCATACAACC...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CCA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATAGTTTTAACTGTTGTTaGAGACTGTGGATTGAGGAT +
Preference number: 4 (lower is better)
Translates to: QILHWFQGCKANLKTLHYSFNCC*RLWIED
Trigger: ATCCTCAATCCACAGTCTCCAACAACAGTTAAAACT...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGAAAGTAATCCTTTCATaGTGTACAGGACCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKKVILS*CTGPQL
Trigger: AAGCTGGGGTCCTGTACACCATGAAAGGATTACTTT...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CCA 90 bp AGCATTAGTTTGCCTATTTCCTCTTTACTAGGATGTGTCTGCCCTTATAAACCCTCAGTTAACTCTGGTTaGAATCTTTCCAAGCATATT +
Preference number: 4 (lower is better)
Translates to: SISLPISSLLGCVCPYKPSVNSG*NLSKHI
Trigger: AATATGCTTGGAAAGATTCCAACCAGAGTTAACTGA...GGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
3UTR CAA 72 bp TCTTTCAGTGTGGTTTTGATAACTTCAGATACTCCATaGGTTCCAAGGATGCAAGGCAAACTTAAAAACACT +
Preference number: 4 (lower is better)
Translates to: SFSVVLITSDTP*VPRMQGKLKNT
Trigger: AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
3UTR CAA 72 bp AGTTTCTCAGTAACTGTATCTTCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCATTGGTTCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: SFSVTVSSFSVV*ITSDTPLVPRM
Trigger: CATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAAGAAGATACAGTTACTGAGAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
3UTR CAA 72 bp TCAAGGAAATATCTGATACAGAGAATTACTTCTACATaGTGGCCTTCCAGAGGGCAAAGACTATTATTCATC +
Preference number: 4 (lower is better)
Translates to: SRKYLIQRITST*WPSRGQRLLFI
Trigger: GATGAATAATAGTCTTTGCCCTCTGGAAGGCCACAATGTAGAAGTAATTCTCTGTATCAGATATTTCCTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR TCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTATGGGAAGTTCCTCTTaGAACTTGGCAATCATTTCT +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCMGSSS*NLAIIS
Trigger: AGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCAT...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTATGTTACATAGGTCATaGTTTCCACTGGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCMLHRS*FPLVEM
Trigger: CATCTCAACCAGTGGAAATCATGACCTATGTAACAT...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR TCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAACTCAGTGGTCTGTTGTaGGGATTCAGTAAAATAATA +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKLSGLL*GFSKII
Trigger: TATTATTTTACTGAATCCTCACAACAGACCACTGAG...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396197.8
ENST00000543987.5
CDS-3UTR GCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGAGGGCAAATATATTCTaGCTTGAGCATCCACATGTT +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKRANIF*LEHPHV
Trigger: AACATGTGGATGCTCAAGGCAGAATATATTTGCCCT...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTTCCGATCACTCGATTTaGAGGAAATGTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCSDHSI*RKCTQF
Trigger: AAACTGAGTACATTTCCTGCAAATCGAGTGATCGGA...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATGGCTTTAAAGTAAGGTaGTTGGCTTTCATTCATAAT +
Preference number: 4 (lower is better)
Translates to: QILHWFQGCKANLKTLHYGFKVR*LAFIHN
Trigger: ATTATGAATGAAAGCCAAGCACCTTACTTTAAAGCC...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543987.5
CDS-3UTR CCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGTCCCATATTTGCAGTTaGCTTCAAGAAGCAAATAGG +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKSHICS*LQEANR
Trigger: CCTATTTGCTTCTTGAAGCCAACTGCAAATATGGGA...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTTCCCATATTTGCAGTTaGCTTCAAGAAGCAAATAGG +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCSHICS*LQEANR
Trigger: CCTATTTGCTTCTTGAAGCCAACTGCAAATATGGGA...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAGTTTTAACTGTTGTTaGAGACTGTGGATTGAGGAT +
Preference number: 4 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKSFNCC*RLWIED
Trigger: ATCCTCAATCCACAGTCTCCAACAACAGTTAAAACT...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACAGTTTTAACTGTTGTTaGAGACTGTGGATTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNSFNCC*RLWIED
Trigger: ATCCTCAATCCACAGTCTCCAACAACAGTTAAAACT...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCCTCCTAACTCCATCTaGATTAACCTATTATATGCT +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYPPNSI*INLLYA
Trigger: AGCATATAATAGGTTAATCCAGATGGAGTTAGGAGG...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR GCA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAATGAATGTTTACCCCTaGTGTAGATTTAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKMNVYP*CRFKEQ
Trigger: CTGTTCTTTAAATCTACAGCAGGGGTAAACATTCAT...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATATGAATGTTTACCCCTaGTGTAGATTTAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYMNVYP*CRFKEQ
Trigger: CTGTTCTTTAAATCTACAGCAGGGGTAAACATTCAT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGAGTTTTAACTGTTGTTaGAGACTGTGGATTGAGGAT +
Preference number: 4 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKSFNCC*RLWIED
Trigger: ATCCTCAATCCACAGTCTCCAACAACAGTTAAAACT...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAGTTTTAACTGTTGTTaGAGACTGTGGATTGAGGAT +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCSFNCC*RLWIED
Trigger: ATCCTCAATCCACAGTCTCCAACAACAGTTAAAACT...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTATGAATGTTTACCCCTaGTGTAGATTTAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCMNVYP*CRFKEQ
Trigger: CTGTTCTTTAAATCTACAGCAGGGGTAAACATTCAT...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR GCA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTGGCTTTAAAGTAAGGTaGTTGGCTTTCATTCATAAT +
Preference number: 4 (lower is better)
Translates to: HHKANQETLYFNQAVCKSGFKVR*LAFIHN
Trigger: ATTATGAATGAAAGCCAAGCACCTTACTTTAAAGCC...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396197.8
ENST00000543987.5
CDS-3UTR CCA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTCTTCTTGACTTACACTaGGATTTACAACATGATTAC +
Preference number: 4 (lower is better)
Translates to: DLHHKANQETLYFNQAVCLLDLH*DLQHDY
Trigger: GTAATCATGTTGTAAATCCCAGTGTAAGTCAAGAAG...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp CGATCTCTGCTCACTGCAAGCTCCACCTACCGGGTTCACGCCATTCTCTTGCCTTCCCTGAACTTGTACTaGCCAAGCAGCCGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: RSLLTASSTYRVHAILLPSLNLY*PSSRLR
Trigger: CCTGAGACGGCTGCTTGGCAAGTACAAGTTCAGGGA...AGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp CGATCTCTGCTCACTGCAAGCTCCACCTACCGGGTTCACGCCATTCTCTTGCCTGAGGCAGACAAATCTTaGCTGATCTCCACATTAGGA +
Preference number: 5 (lower is better)
Translates to: RSLLTASSTYRVHAILLPEADKS*LISTLG
Trigger: TCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTC...AGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp TTAGCAGTTCCATGGCTCTGTTGGACAGCTGCACTTGAGAGGTATGACTCACTATCCCTGAACTTGTACTaGCCAAGCAGCCGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: LAVPWLCWTAALERYDSLSLNLY*PSSRLR
Trigger: CCTGAGACGGCTGCTTGGCAAGTACAAGTTCAGGGA...TAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAACTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp CGATCTCTGCTCACTGCAAGCTCCACCTACCGGGTTCACGCCATTCTCTTGCCTCAAATATATTCTGCCTaGAGCATCCACATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RSLLTASSTYRVHAILLPQIYSA*SIHMFS
Trigger: GGAAAACATGTGGATGCTCAAGGCAGAATATATTTG...AGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp TTAGCAGTTCCATGGCTCTGTTGGACAGCTGCACTTGAGAGGTATGACTCACTACTCCATGTGAGCACTTaGTCTTCTCCTTGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: LAVPWLCWTAALERYDSLLHVST*SSPCSP
Trigger: TGGCGAGCAAGGAGAAGACAAAGTGCTCACATGGAG...TAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAACTGCTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp GCTGATCTCCACATTAGGAAGGTTGAAGATTTCAAGGTCCATCGTGGCTCCTTTGTTAGGTCCCTGAACTaGTACTTGCCAAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: ADLHIRKVEDFKVHRGSFVRSLN*YLPSSR
Trigger: ACGGCTGCTTGGCAAGTACAAGTTCAGGGACCTAAC...AAAGGAGCCACGATGGACCTTGAAATCTTCAACCTTCCTAATGTGGAGATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp CGATCTCTGCTCACTGCAAGCTCCACCTACCGGGTTCACGCCATTCTCTTGCCTTCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCA +
Preference number: 5 (lower is better)
Translates to: RSLLTASSTYRVHAILLPSFSVV*ITSDTP
Trigger: TGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA...AGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp AGGTTGAAGATTTCAAGGTCCATCGTGGCTCCTTTAGTCCCTTCTGAGAGGTCTGTTGGAGACTGTGGATaGAGGATGCACTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: RLKISRSIVAPLVPSERSVGDCG*RMHCFG
Trigger: TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAAC...AGACCTCTCAGAAGGGACTAAAGGAGCCACGATGGACCTTGAAATCTTCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTAGACCTTCTTCCGGACTaGCTGCAGGACGGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLDLLPD*LQDGSR
Trigger: GCGGCTTCCGTCCTGCAGCAAGTCCGGAAGAAGGTC...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543987.5
CDS-3UTR CAA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAAGACCTTCTTCCGGACTaGCTGCAGGACGGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKDLLPD*LQDGSR
Trigger: GCGGCTTCCGTCCTGCAGCAAGTCCGGAAGAAGGTC...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396197.8
ENST00000543987.5
CDS-3UTR CAA 90 bp CAGTTTCCATGTTACATAGGTCATGATTTCCACTGGTTGAGATGCAACGAGCAGACTCACTACTTCTTCTaGGCCACTCCATGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: QFPCYIGHDFHWLRCNEQTHYFF*ATPCEH
Trigger: GTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAGT...CTGCTCGTTGCATCTCAACCAGTGGAAATCATGACCTATGTAACATGGAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp ATCAAAGTTTTAACTGTTGTTGGAGACTGTGGATTGAGGATGCACTGCTTTGGAGTTAGGTCCCTGAACTaGTACTTGCCAAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: IKVLTVVGDCGLRMHCFGVRSLN*YLPSSR
Trigger: ACGGCTGCTTGGCAAGTACAAGTTCAGGGACCTAAC...TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000543987.5
CDS-3UTR CAA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTCCATGTGAGCACTTaGTCTTCTCCTTGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKLHVST*SSPCSP
Trigger: TGGCGAGCAAGGAGAAGACAAAGTGCTCACATGGAG...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACCTCCATGTGAGCACTTaGTCTTCTCCTTGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: LQILHWFQGCKANLKTLHLHVST*SSPCSP
Trigger: TGGCGAGCAAGGAGAAGACAAAGTGCTCACATGGAG...GTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCGTTGGAGACTGTGGATaGAGGATGCACTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGVGDCG*RMHCFG
Trigger: TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAAC...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAGTTGGAGACTGTGGATaGAGGATGCACTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQVGDCG*RMHCFG
Trigger: TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAAC...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCCCCTTTGTCTTCTCCTaGCTCGCCAATAACCCATAC +
Preference number: 5 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGPFVFS*LANNPY
Trigger: GTATGGGTTATTGGCGAGCAAGGAGAAGACAAAGGG...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541984.5
CDS-3UTR CAA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCCCTGAACTTGTACTaGCCAAGCAGCCGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTSLNLY*PSSRLR
Trigger: CCTGAGACGGCTGCTTGGCAAGTACAAGTTCAGGGA...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TACCCTTTGCTGAAATTGCTAATGTGCAGGCAATACCGAGTTCTCCACCTCCAATGTCTGCAATACCCTTaGCTGAAATTGCTAATGTGC +
Preference number: 5 (lower is better)
Translates to: YPLLKLLMCRQYRVLHLQCLQYP*LKLLMC
Trigger: GCACATTAGCAATTTCAGCAAAGGGTATTGCAGACA...TTGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp GAAATTGCTAATGTGCAGGCAATACCGAGTTCTCCACCTCCAACCACAGTAATTCTGAACATATCCACATaGCTCTGTACCACATCAAGG +
Preference number: 5 (lower is better)
Translates to: EIANVQAIPSSPPPTTVILNIST*LCTTSR
Trigger: CCTTGATGTGGTACAGAGCAATGTGGATATGTTCAG...AATTACTGTGGTTGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTCATGATTTCCACTGGTaGAGATGCAACGAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTHDFHW*RCNEQD
Trigger: GTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATG...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTCCATGTGAGCACTTaGTCTTCTCCTTGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSLHVST*SSPCSP
Trigger: TGGCGAGCAAGGAGAAGACAAAGTGCTCACATGGAG...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTGTTGGACAGCTGCACTaGAGAGGTATGACTCACTAC +
Preference number: 5 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTVGQLH*RGMTHY
Trigger: GTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAAC...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTTCCCTGAACTTGTACTaGCCAAGCAGCCGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSSLNLY*PSSRLR
Trigger: CCTGAGACGGCTGCTTGGCAAGTACAAGTTCAGGGA...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000543987.5
CDS-3UTR CAA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGTCCCTGAACTTGTACTaGCCAAGCAGCCGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKSLNLY*PSSRLR
Trigger: CCTGAGACGGCTGCTTGGCAAGTACAAGTTCAGGGA...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000543987.5
CDS-3UTR CAA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTGTTAGGTCCCTGAACTaGTACTTGCCAAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTVRSLN*YLPSSR
Trigger: ACGGCTGCTTGGCAAGTACAAGTTCAGGGACCTAAC...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAGTTAGGTCCCTGAACTaGTACTTGCCAAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKVRSLN*YLPSSR
Trigger: ACGGCTGCTTGGCAAGTACAAGTTCAGGGACCTAAC...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ATTGCTCTGTACCACATCAAGGTACGACTGAGAACTACCCAAAGAGTTGACTGTCCCAGCTCTTTGAATTaGTATCTGAAACACCTTCAG +
Preference number: 5 (lower is better)
Translates to: IALYHIKVRLRTTQRVDCPSSLN*YLKHLQ
Trigger: CTGAAGGTGTTTCAGATACAAATTCAAAGAGCTGGG...ACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCCTGAACATATCCACATaGCTCTGTACCACATCAAGG +
Preference number: 5 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGLNIST*LCTTSR
Trigger: CCTTGATGTGGTACAGAGCAATGTGGATATGTTCAG...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACATGATTTCCACTGGTaGAGATGCAACGAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSHDFHW*RCNEQD
Trigger: GTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATG...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATCATGATTTCCACTGGTaGAGATGCAACGAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: QILHWFQGCKANLKTLHYHDFHW*RCNEQD
Trigger: GTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATG...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTACATGATTTCCACTGGTaGAGATGCAACGAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLHDFHW*RCNEQD
Trigger: GTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATG...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCATAACCCATACTTCTTaGCCTGAAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGITHTS*PEVCAF
Trigger: GAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTAT...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAATAACCCATACTTCTTaGCCTGAAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: QCGFDNFRYSIGSKDARQITHTS*PEVCAF
Trigger: GAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTAT...TTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTCACTTTGTCTTCTCCTaGCTCGCCAATAACCCATAC +
Preference number: 5 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTHFVFS*LANNPY
Trigger: GTATGGGTTATTGGCGAGCAAGGAGAAGACAAAGTG...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAACTCCATGTGAGCACTTaGTCTTCTCCTTGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKLHVST*SSPCSP
Trigger: TGGCGAGCAAGGAGAAGACAAAGTGCTCACATGGAG...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GGCCTTCCAGAGGGCAAAGACTATTATTCATCTTCGAATAGTCAAATTCTAACAACTCACTACTTCTTCTaGGCCACTCCATGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GLPEGKDYYSSSNSQILTTHYFF*ATPCEH
Trigger: GTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAGT...TGTTAGAATTTGACTATTCGAAGATGAATAATAGTCTTTGCCCTCTGGAAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATACTCACTACTTCTTCTaGGCCACTCCATGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: QILHWFQGCKANLKTLHYTHYFF*ATPCEH
Trigger: GTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAGT...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCAGTTGGACAGCTGCACTaGAGAGGTATGACTCACTAC +
Preference number: 5 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSVGQLH*RGMTHY
Trigger: GTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAAC...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTAGCAGTTCCATGGCTCTGTTGGACAGCTGCACTTGAGAGGTATGACTCACTATCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCA +
Preference number: 5 (lower is better)
Translates to: LAVPWLCWTAALERYDSLSFSVV*ITSDTP
Trigger: TGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA...TAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAACTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTAGTTGGAGACTGTGGATaGAGGATGCACTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLVGDCG*RMHCFG
Trigger: TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAAC...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTGTTAGGTCCCTGAACTaGTACTTGCCAAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSVRSLN*YLPSSR
Trigger: ACGGCTGCTTGGCAAGTACAAGTTCAGGGACCTAAC...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000543987.5
CDS-3UTR CAA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTGTTAGGTCCCTGAACTaGTACTTGCCAAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: DLHHKANQETLYFNQAVCVRSLN*YLPSSR
Trigger: ACGGCTGCTTGGCAAGTACAAGTTCAGGGACCTAAC...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000543987.5
CDS-3UTR CAA 90 bp GAGGATGCACTGCTTTGGAGTTTCTCAGTAACTGTATCTTCTTTCAGTGTGGTTCTAAGATTCCCATATTaGCAGTTGGCTTCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: EDALLWSFSVTVSSFSVVLRFPY*QLASRS
Trigger: GCTTCTTGAAGCCAACTGCAAATATGGGAATCTTAG...AACCACACTGAAAGAAGATACAGTTACTGAGAAACTCCAAAGCAGTGCATCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAGGATGGCTCCAGTTTaGGAGATAGGGCAAATATAT +
Preference number: 5 (lower is better)
Translates to: FSVVLITSDTPLVPRMQGRMAPV*EIGQIY
Trigger: ATATATTTGCCCTATCTCCAAAACTGGAGCCATCCT...GCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTACAATACTGTCAACCATGTCAGCTACTGATAGTCCAACAGACCAGGATCTTTGAGGCAGACAAATCTTaGCTGATCTCCACATTAGGA +
Preference number: 5 (lower is better)
Translates to: LQYCQPCQLLIVQQTRIFEADKS*LISTLG
Trigger: TCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTC...AAAGATCCTGGTCTGTTGGACTATCAGTAGCTGACATGGTTGACAGTATTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAAGAGGCAGACAAATCTTaGCTGATCTCCACATTAGGA +
Preference number: 5 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKEADKS*LISTLG
Trigger: TCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTC...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTGAGGCAGACAAATCTTaGCTGATCTCCACATTAGGA +
Preference number: 5 (lower is better)
Translates to: VVLITSDTPLVPRMQGKLEADKS*LISTLG
Trigger: TCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTC...AAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp AGCATTAGTTTGCCTATTTCCTCTTTACTAGGATGTGTCTGCCCTTATAAACCCCTGAACATATCCACATaGCTCTGTACCACATCAAGG +
Preference number: 5 (lower is better)
Translates to: SISLPISSLLGCVCPYKPLNIST*LCTTSR
Trigger: CCTTGATGTGGTACAGAGCAATGTGGATATGTTCAG...GGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp GAGGATGCACTGCTTTGGAGTTTCTCAGTAACTGTATCTTCTTTCAGTGTGGTTTTCCGATCACTCGATTaGCAGGAAATGTACTCAGTT +
Preference number: 5 (lower is better)
Translates to: EDALLWSFSVTVSSFSVVFRSLD*QEMYSV
Trigger: AACTGAGTACATTTCCTGCAAATCGAGTGATCGGAA...AACCACACTGAAAGAAGATACAGTTACTGAGAAACTCCAAAGCAGTGCATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATCACTTTGTCTTCTCCTaGCTCGCCAATAACCCATAC +
Preference number: 5 (lower is better)
Translates to: QILHWFQGCKANLKTLHYHFVFS*LANNPY
Trigger: GTATGGGTTATTGGCGAGCAAGGAGAAGACAAAGTG...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTACACTTTGTCTTCTCCTaGCTCGCCAATAACCCATAC +
Preference number: 5 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLHFVFS*LANNPY
Trigger: GTATGGGTTATTGGCGAGCAAGGAGAAGACAAAGTG...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTCTCCATGTGAGCACTTaGTCTTCTCCTTGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSLHVST*SSPCSP
Trigger: TGGCGAGCAAGGAGAAGACAAAGTGCTCACATGGAG...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTACTCACTACTTCTTCTaGGCCACTCCATGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTTHYFF*ATPCEH
Trigger: GTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAGT...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATGTTGGACAGCTGCACTaGAGAGGTATGACTCACTAC +
Preference number: 5 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYVGQLH*RGMTHY
Trigger: GTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAAC...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTGTTGGACAGCTGCACTaGAGAGGTATGACTCACTAC +
Preference number: 5 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTVGQLH*RGMTHY
Trigger: GTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAAC...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GGCCTTCCAGAGGGCAAAGACTATTATTCATCTTCGAATAGTCAAATTCTAACAGTGGTGGTGGTGATATaGCTTCTTGACTTACACTGG +
Preference number: 5 (lower is better)
Translates to: GLPEGKDYYSSSNSQILTVVVVI*LLDLHW
Trigger: CCAGTGTAAGTCAAGAAGCAATATCACCACCACCAC...TGTTAGAATTTGACTATTCGAAGATGAATAATAGTCTTTGCCCTCTGGAAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp TTTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGGTTAGGTCCCTGAACTaGTACTCCAGACAGCTTAAA +
Preference number: 5 (lower is better)
Translates to: FQCGFDNFRYSIGSKDARVRSLN*YSRQLK
Trigger: TTTAAGCTGTCTGGAGTACAAGTTCAGGGACCTAAC...CCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535484.5
CDS-3UTR CAA 90 bp GAGGATGCACTGCTTTGGAGTTTCTCAGTAACTGTATCTTCTTTCAGTGTGGTTCAAATATATTCTGCCTaGAGCATCCACATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: EDALLWSFSVTVSSFSVVQIYSA*SIHMFS
Trigger: GGAAAACATGTGGATGCTCAAGGCAGAATATATTTG...AACCACACTGAAAGAAGATACAGTTACTGAGAAACTCCAAAGCAGTGCATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAAAGGATGGCTCCAGTTTaGGAGATAGGGCAAATATAT +
Preference number: 5 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKRMAPV*EIGQIY
Trigger: ATATATTTGCCCTATCTCCAAAACTGGAGCCATCCT...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ATCAAAGTTTTAACTGTTGTTGGAGACTGTGGATTGAGGATGCACTGCTTTGGACCCAGCTCTTTGAATTaGTATCTGAAACACCTTCAG +
Preference number: 5 (lower is better)
Translates to: IKVLTVVGDCGLRMHCFGPSSLN*YLKHLQ
Trigger: CTGAAGGTGTTTCAGATACAAATTCAAAGAGCTGGG...TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTCCCAGCTCTTTGAATTaGTATCTGAAACACCTTCAG +
Preference number: 5 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTPSSLN*YLKHLQ
Trigger: CTGAAGGTGTTTCAGATACAAATTCAAAGAGCTGGG...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTTACCCTTTGCTGAAATaGCTAATGTGCAGGCAATAC +
Preference number: 5 (lower is better)
Translates to: VVLITSDTPLVPRMQGKLYPLLK*LMCRQY
Trigger: GTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTA...AAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp AGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAATGTCTGCAATACCCTTaGCTGAAATTGCTAATGTGC +
Preference number: 5 (lower is better)
Translates to: SVVLITSDTPLVPRMQGKCLQYP*LKLLMC
Trigger: GCACATTAGCAATTTCAGCAAAGGGTATTGCAGACA...TTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTCATGATTTCCACTGGTaGAGATGCAACGAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: DLHHKANQETLYFNQAVCHDFHW*RCNEQD
Trigger: GTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATG...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTAATAACCCATACTTCTTaGCCTGAAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLITHTS*PEVCAF
Trigger: GAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTAT...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATATAACCCATACTTCTTaGCCTGAAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: QILHWFQGCKANLKTLHYITHTS*PEVCAF
Trigger: GAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTAT...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAACACTTTGTCTTCTCCTaGCTCGCCAATAACCCATAC +
Preference number: 5 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKHFVFS*LANNPY
Trigger: GTATGGGTTATTGGCGAGCAAGGAGAAGACAAAGTG...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTACTCACTACTTCTTCTaGGCCACTCCATGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSTHYFF*ATPCEH
Trigger: GTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAGT...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTACTCACTACTTCTTCTaGGCCACTCCATGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: DLHHKANQETLYFNQAVCTHYFF*ATPCEH
Trigger: GTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAGT...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTGTTGGACAGCTGCACTaGAGAGGTATGACTCACTAC +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSVGQLH*RGMTHY
Trigger: GTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAAC...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTGTTGGAGACTGTGGATaGAGGATGCACTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSVGDCG*RMHCFG
Trigger: TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAAC...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGGTTGGAGACTGTGGATaGAGGATGCACTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKVGDCG*RMHCFG
Trigger: TCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAAC...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTCCCAGCTCTTTGAATTaGTATCTGAAACACCCTGAT +
Preference number: 5 (lower is better)
Translates to: CGFDNFRYSIGSKDARQTPSSLN*YLKHPD
Trigger: ATCAGGGTGTTTCAGATACAAATTCAAAGAGCTGGG...AGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541984.5
CDS-3UTR CAA 90 bp GGCCTTCCAGAGGGCAAAGACTATTATTCATCTTCGAATAGTCAAATTCTAACACTAAGATTCCCATATTaGCAGTTGGCTTCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: GLPEGKDYYSSSNSQILTLRFPY*QLASRS
Trigger: GCTTCTTGAAGCCAACTGCAAATATGGGAATCTTAG...TGTTAGAATTTGACTATTCGAAGATGAATAATAGTCTTTGCCCTCTGGAAGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp TTTCAGTGTGGTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAATATATTCTGCCTaGAGCATCCACATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FQCGFDNFRYSIGSKDARQIYSA*SIHMFS
Trigger: GGAAAACATGTGGATGCTCAAGGCAGAATATATTTG...CCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCATGTCTGCAATACCCTTaGCTGAAATTGCTAATGTGC +
Preference number: 5 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSCLQYP*LKLLMC
Trigger: GCACATTAGCAATTTCAGCAAAGGGTATTGCAGACA...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTGAACATATCCACATaGCTCTGTACCACATCAAGG +
Preference number: 5 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYLNIST*LCTTSR
Trigger: CCTTGATGTGGTACAGAGCAATGTGGATATGTTCAG...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAACTGAACATATCCACATaGCTCTGTACCACATCAAGG +
Preference number: 5 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKLNIST*LCTTSR
Trigger: CCTTGATGTGGTACAGAGCAATGTGGATATGTTCAG...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCATTCCGATCACTCGATTaGCAGGAAATGTACTCAGTT +
Preference number: 5 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSFRSLD*QEMYSV
Trigger: AACTGAGTACATTTCCTGCAAATCGAGTGATCGGAA...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATTTCCGATCACTCGATTaGCAGGAAATGTACTCAGTT +
Preference number: 5 (lower is better)
Translates to: QILHWFQGCKANLKTLHYFRSLD*QEMYSV
Trigger: AACTGAGTACATTTCCTGCAAATCGAGTGATCGGAA...ATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATATAACCCATACTTCTTaGCCTGAAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYITHTS*PEVCAF
Trigger: GAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTAT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTATAACCCATACTTCTTaGCCTGAAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: ITSDTPLVPRMQGKLKNTITHTS*PEVCAF
Trigger: GAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTAT...AGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGCACTTTGTCTTCTCCTaGCTCGCCAATAACCCATAC +
Preference number: 5 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKHFVFS*LANNPY
Trigger: GTATGGGTTATTGGCGAGCAAGGAGAAGACAAAGTG...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GAGGATGCACTGCTTTGGAGTTTCTCAGTAACTGTATCTTCTTTCAGTGTGGTTTCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCA +
Preference number: 5 (lower is better)
Translates to: EDALLWSFSVTVSSFSVVSFSVV*ITSDTP
Trigger: TGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA...AACCACACTGAAAGAAGATACAGTTACTGAGAAACTCCAAAGCAGTGCATCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATAGAATTACTTCTACATaGTGGCCTTCCAGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYRITST*WPSRGQ
Trigger: TTGCCCTCTGGAAGGCCACAATGTAGAAGTAATTCT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCATATCATAATATCCCTTaGTCTTCTCCTTGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSYHNIP*SSPCSP
Trigger: TGGCGAGCAAGGAGAAGACAAAGGGATATTATGATA...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541984.5
CDS-3UTR CAA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACCTAAGATTCCCATATTaGCAGTTGGCTTCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNLRFPY*QLASRS
Trigger: GCTTCTTGAAGCCAACTGCAAATATGGGAATCTTAG...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAACTAAGATTCCCATATTaGCAGTTGGCTTCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKLRFPY*QLASRS
Trigger: GCTTCTTGAAGCCAACTGCAAATATGGGAATCTTAG...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACAGGATGGCTCCAGTTTaGGAGATAGGGCAAATATAT +
Preference number: 5 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNRMAPV*EIGQIY
Trigger: ATATATTTGCCCTATCTCCAAAACTGGAGCCATCCT...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCCCAGCTCTTTGAATTaGTATCTGAAACACCTTCAG +
Preference number: 5 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYPSSLN*YLKHLQ
Trigger: CTGAAGGTGTTTCAGATACAAATTCAAAGAGCTGGG...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATTACCCTTTGCTGAAATaGCTAATGTGCAGGCAATAC +
Preference number: 5 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYYPLLK*LMCRQY
Trigger: GTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTA...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAATGTCTGCAATACCCTTaGCTGAAATTGCTAATGTGC +
Preference number: 5 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKCLQYP*LKLLMC
Trigger: GCACATTAGCAATTTCAGCAAAGGGTATTGCAGACA...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTGAGGCAGACAAATCTTaGCTGATCTCCACATTAGGA +
Preference number: 5 (lower is better)
Translates to: DLHHKANQETLYFNQAVCEADKS*LISTLG
Trigger: TCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTC...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTGAGGCAGACAAATCTTaGCTGATCTCCACATTAGGA +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSEADKS*LISTLG
Trigger: TCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTC...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGCTGAACATATCCACATaGCTCTGTACCACATCAAGG +
Preference number: 5 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKLNIST*LCTTSR
Trigger: CCTTGATGTGGTACAGAGCAATGTGGATATGTTCAG...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATTTCCGATCACTCGATTaGCAGGAAATGTACTCAGTT +
Preference number: 5 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYFRSLD*QEMYSV
Trigger: AACTGAGTACATTTCCTGCAAATCGAGTGATCGGAA...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATTTTTCCGATCACTCGATTaGCAGGAAATGTACTCAGTT +
Preference number: 5 (lower is better)
Translates to: DTPLVPRMQGKLKNTSLFFRSLD*QEMYSV
Trigger: AACTGAGTACATTTCCTGCAAATCGAGTGATCGGAA...AAATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396196.6
ENST00000541984.5
CDS-3UTR CAA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAATTCCGATCACTCGATTaGCAGGAAATGTACTCAGTT +
Preference number: 5 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKFRSLD*QEMYSV
Trigger: AACTGAGTACATTTCCTGCAAATCGAGTGATCGGAA...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTATAACCCATACTTCTTaGCCTGAAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: DLHHKANQETLYFNQAVCITHTS*PEVCAF
Trigger: GAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTAT...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GTTTTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAGTCATGATTTCCACTTaGCTGATCTCCACATTAGGA +
Preference number: 5 (lower is better)
Translates to: VLITSDTPLVPRMQGKLKVMIST*LISTLG
Trigger: TCCTAATGTGGAGATCAGCAAAGTGGAAATCATGAC...TTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541984.5
CDS TCA 90 bp ATATTTGCAGTTGGCTTCAAGAAGCAAATAGGGGGAGCGAAAGGGTaGGAATCCAAAATCCAGAAACGAATTGGTATGTTATATGTATTA +
Preference number: 5 (lower is better)
Translates to: IFAVGFKKQIGGAKG*ESKIQKRIGMLYVL
Trigger: TAATACATATAACATACCAATTCGTTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCCTATTTGCTTCTTGAAGCCAACTGCAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300038.7
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535340.5
ENST00000535484.5
ENST00000540917.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTCTAAGATTCCCATATTaGCAGTTGGCTTCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSLRFPY*QLASRS
Trigger: GCTTCTTGAAGCCAACTGCAAATATGGGAATCTTAG...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTGATAACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACCAAATATATTCTGCCTaGAGCATCCACATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LITSDTPLVPRMQGKLKNQIYSA*SIHMFS
Trigger: GGAAAACATGTGGATGCTCAAGGCAGAATATATTTG...GTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACCCCTGCTGTAGATTTAAAGAACAGCATAGATATCTCAAGAACCCCAAATAAACAAATATATTCTGCCTaGAGCATCCACATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TPAVDLKNSIDISRTPNKQIYSA*SIHMFS
Trigger: GGAAAACATGTGGATGCTCAAGGCAGAATATATTTG...TTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTAGGATGGCTCCAGTTTaGGAGATAGGGCAAATATAT +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSRMAPV*EIGQIY
Trigger: ATATATTTGCCCTATCTCCAAAACTGGAGCCATCCT...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTCCCAGCTCTTTGAATTaGTATCTGAAACACCTTCAG +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSPSSLN*YLKHLQ
Trigger: CTGAAGGTGTTTCAGATACAAATTCAAAGAGCTGGG...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTTACCCTTTGCTGAAATaGCTAATGTGCAGGCAATAC +
Preference number: 5 (lower is better)
Translates to: DLHHKANQETLYFNQAVCYPLLK*LMCRQY
Trigger: GTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTA...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTCTTCTTATTGTTTACAATACTGTCAACCATGTCAGCTACTGATAGTCCAACATACCCTTTGCTGAAATaGCTAATGTGCAGGCAATAC +
Preference number: 5 (lower is better)
Translates to: FFLLFTILSTMSATDSPTYPLLK*LMCRQY
Trigger: GTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTA...TGTTGGACTATCAGTAGCTGACATGGTTGACAGTATTGTAAACAATAAGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396196.6
CDS-3UTR CAA 90 bp CATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTAAAAGTTACCCTTTGCTGAAATaGCTAATGTGCAGGCAATAC +
Preference number: 5 (lower is better)
Translates to: HHKANQETLYFNQAVCKSYPLLK*LMCRQY
Trigger: GTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTA...ACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp GATTTACATCACAAAGCTAATCAAGAAACCCTCTACTTTAACCAAGCAGTTTGTTGTCTGCAATACCCTTaGCTGAAATTGCTAATGTGC +
Preference number: 5 (lower is better)
Translates to: DLHHKANQETLYFNQAVCCLQYP*LKLLMC
Trigger: GCACATTAGCAATTTCAGCAAAGGGTATTGCAGACA...ACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGTGTCTGCAATACCCTTaGCTGAAATTGCTAATGTGC +
Preference number: 5 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKCLQYP*LKLLMC
Trigger: GCACATTAGCAATTTCAGCAAAGGGTATTGCAGACA...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGTTCCGATCACTCGATTaGCAGGAAATGTACTCAGTT +
Preference number: 5 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKFRSLD*QEMYSV
Trigger: AACTGAGTACATTTCCTGCAAATCGAGTGATCGGAA...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS-3UTR CAA 90 bp TCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCACTATCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCA +
Preference number: 5 (lower is better)
Translates to: SDTPLVPRMQGKLKNTSLSFSVV*ITSDTP
Trigger: TGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA...TAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS-3UTR CAA 90 bp ACTTCAGATACTCCATTGGTTCCAAGGATGCAAGGCAAACTTAAAAACACTTCATCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCA +
Preference number: 5 (lower is better)
Translates to: TSDTPLVPRMQGKLKNTSSFSVV*ITSDTP
Trigger: TGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA...TGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000396196.6
ENST00000535484.5
ENST00000541984.5
ENST00000543987.5
CDS TCA 90 bp CTCACTACTTCTTCTTGGCCACTCCATGTGAGCACTAAAATTAGATaGAGAATTAATTATGTTTTGCCAGTGACTCTTTGGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: LTTSSWPLHVSTKIR*RINYVLPVTLWIKM
Trigger: CATCTTAATCCAAAGAGTCACTGGCAAAACATAATTAATTCTTCATCTAATTTTAGTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539569.1
CDS-3UTR CAA 90 bp ACACTGCAGATGAATGTTTACCCCTGCTGTAGATTTAAAGAACAGCATAGATATAATAGCCAAGACTTCTaGAGGACTAAACCTCAATTT +
Preference number: 5 (lower is better)
Translates to: TLQMNVYPCCRFKEQHRYNSQDF*RTKPQF
Trigger: AAATTGAGGTTTAGTCCTCAAGAAGTCTTGGCTATT...ATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396197.8
CDS-3UTR CAA 90 bp TTTTTCCCCTCCTTGTATAACTCCTTAAGGATTTACATCACAAAGCTAATCAAGTCTTTCAGTGTGGTTTaGATAACTTCAGATACTCCA +
Preference number: 5 (lower is better)
Translates to: FFPSLYNSLRIYITKLIKSFSVV*ITSDTP
Trigger: TGGAGTATCTGAAGTTATCAAAACCACACTGAAAGA...CTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535484.5
ENST00000543987.5
CDS GCA 72 bp CAGAGCGAGACTCCACCTTTGCTGAAATTGCTAATGTaGAGGCAATACCGAGTTCTCCACCTCCAACCACAG +
Preference number: 6 (lower is better)
Translates to: QSETPPLLKLLM*RQYRVLHLQPQ
Trigger: CTGTGGTTGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTCAGCAAAGGTGGAGTCTCGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300038.7
CDS GCA 72 bp ATGATGAGGCAGAATGGATCACCCCTCTCACCACTATaGAGGATCCAACCGTCTTTTTGGCACGGCTCATTC +
Preference number: 6 (lower is better)
Translates to: MMRQNGSPLSPL*RIQPSFWHGSF
Trigger: GAATGAGCCGTGCCAAAAAGACGGTTGGATCCTGCATAGTGGTGAGAGGGGTGATCCATTCTGCCTCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535484.5
CDS CCA 72 bp GGAGCAGCTTTGTACAGGCAGTTGTCATCAGGGTTCTaGGACTTGGGTAACCCTAGAGAGCTCAATTTCAAA +
Preference number: 6 (lower is better)
Translates to: GAALYRQLSSGF*DLGNPRELNFK
Trigger: TTTGAAATTGAGCTCTCTAGGGTTACCCAAGTCCCAGAACCCTGATGACAACTGCCTGTACAAAGCTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535340.5
CDS CAA 72 bp GTGGGAAACGACTATAAAAAGACAGGGAGCAAACAGTaGGCTCCAAAACCTGGAGGGAGCAGCTTTGTACAG +
Preference number: 6 (lower is better)
Translates to: VGNDYKKTGSKQ*APKPGGSSFVQ
Trigger: CTGTACAAAGCTGCTCCCTCCAGGTTTTGGAGCCAACTGTTTGCTCCCTGTCTTTTTATAGTCGTTTCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535340.5
CDS CAA 90 bp CTTTCTCAAGTGGGAAACGACTATAAAAAGACAGGGAGCAAACAGTaGGCTCCAAAACCTGGAGGGAGCAGCTTTGTACAGGCAGTTGTC +
Preference number: 6 (lower is better)
Translates to: LSQVGNDYKKTGSKQ*APKPGGSSFVQAVV
Trigger: GACAACTGCCTGTACAAAGCTGCTCCCTCCAGGTTTTGGAGCCAACTGTTTGCTCCCTGTCTTTTTATAGTCGTTTCCCACTTGAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535340.5
CDS CCA 72 bp CTTTGTACAGGCAGTTGTCATCAGGGTTCTGGGACTTaGGTAACCCTAGAGAGCTCAATTTCAAATTACTTC +
Preference number: 6 (lower is better)
Translates to: LCTGSCHQGSGT*VTLESSISNYF
Trigger: GAAGTAATTTGAAATTGAGCTCTCTAGGGTTACCCAAGTCCCAGAACCCTGATGACAACTGCCTGTACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535340.5
CDS TCA 72 bp GTTGGCTTCAAGAAGCAAATAGGGGGAGCGAAAGGGTaGGAATCCAAAATCCAGAAACGAATTGGTATGTTA +
Preference number: 6 (lower is better)
Translates to: VGFKKQIGGAKG*ESKIQKRIGML
Trigger: TAACATACCAATTCGTTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCCTATTTGCTTCTTGAAGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300038.7
ENST00000320750.10
ENST00000379387.8
ENST00000396197.8
ENST00000535340.5
ENST00000535484.5
ENST00000540917.5
ENST00000543987.5
CDS CAA 72 bp ATGATTTCCACTTTGCTGATCTCCACATTAGGAAGGTaGAAGATTTCAAGGTCCATCGTGGCTCCTTTAGTC +
Preference number: 6 (lower is better)
Translates to: MISTLLISTLGR*KISRSIVAPLV
Trigger: GACTAAAGGAGCCACGATGGACCTTGAAATCTTCAACCTTCCTAATGTGGAGATCAGCAAAGTGGAAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541984.5
CDS CAA 72 bp GAGCGAAAGGGTGAGAATCCAAAATCCAGAAACGAATaGGTATGTTATATGTATTACCATAGGTGTCCATGG +
Preference number: 6 (lower is better)
Translates to: ERKGENPKSRNE*VCYMYYHRCPW
Trigger: CCATGGACACCTATGGTAATACATATAACATACCAATTCGTTTCTGGATTTTGGATTCTCACCCTTTCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320750.10
ENST00000379387.8
CDS CAA 72 bp TATTTATATCATAATATCCCTGTTGGACAGCTGCACTaGAGAGGTATGACTCACTACTTCTTCTTGGCCACT +
Preference number: 6 (lower is better)
Translates to: YLYHNIPVGQLH*RGMTHYFFLAT
Trigger: AGTGGCCAAGAAGAAGTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGGGATATTATGATATAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320750.10
ENST00000535484.5
ENST00000543987.5
CDS CCA 72 bp AGCGAAAGGGTGAGAATCCAAAATCCAGAAACGAATTaGTATGTTATATGTATTACCCTGATACATCACAGG +
Preference number: 6 (lower is better)
Translates to: SERVRIQNPETN*YVICITLIHHR
Trigger: CCTGTGATGTATCAGGGTAATACATATAACATACCAATTCGTTTCTGGATTTTGGATTCTCACCCTTTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300038.7
ENST00000396197.8
ENST00000535340.5
ENST00000535484.5
ENST00000540917.5
ENST00000543987.5
CDS CCA 72 bp AGCGAAAGGGTGAGAATCCAAAATCCAGAAACGAATTaGTATGTTATATGTATTACCATAGGTGTCCATGGA +
Preference number: 6 (lower is better)
Translates to: SERVRIQNPETN*YVICITIGVHG
Trigger: TCCATGGACACCTATGGTAATACATATAACATACCAATTCGTTTCTGGATTTTGGATTCTCACCCTTTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320750.10
ENST00000379387.8
CDS CAA 72 bp GAGCGAAAGGGTGAGAATCCAAAATCCAGAAACGAATaGGTATGTTATATGTATTACCCTGATACATCACAG +
Preference number: 6 (lower is better)
Translates to: ERKGENPKSRNE*VCYMYYPDTSQ
Trigger: CTGTGATGTATCAGGGTAATACATATAACATACCAATTCGTTTCTGGATTTTGGATTCTCACCCTTTCGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300038.7
ENST00000396197.8
ENST00000535340.5
ENST00000535484.5
ENST00000540917.5
ENST00000543987.5