RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UCP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000175567

Ensembl transcript IDs: ENST00000310473.9, ENST00000536983.5, ENST00000539330.1, ENST00000539764.1, ENST00000541027.5, ENST00000542615.5, ENST00000543714.5, ENST00000544615.5, ENST00000545212.1, ENST00000545562.2, ENST00000663595.2

Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAAGGACGCTTGGGATCCTaGCTGGTACGAGGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQGRLGS*LVRGLP
Trigger: TGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCC...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
3UTR-3UTR CCA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAAGCTTGGGATCCTGGCTaGTACGAGGCCTCCCACACT +
Preference number: 2 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQAWDPG*YEASHT
Trigger: AGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGC...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
3UTR-3UTR CCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACAAGGGACGGGACGCTTaGGATCCTGGCTGGTACGAG +
Preference number: 2 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNKGRDA*DPGWYE
Trigger: CTCGTACCAGCCAGGATCCCAAGCGTCCCGTCCCTT...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
3UTR-3UTR TCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACAAGTGCAGGCAGCCATaGGGGCTCGTTTCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNKCRQP*GLVSAA
Trigger: AGCAGCTGAAACGAGCCCTCATGGCTGCCTGCACTT...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536983.5
3UTR-3UTR TCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCAGACAAAGCCAGAGGTaGTCAGGTCAGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: REGKEGRERRKKRKAWPGRQSQR*SGQQQE
Trigger: CTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCT...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
3UTR-3UTR TCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAGACAAAGCCAGAGGTaGTCAGGTCAGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: EGGKRKKEEKESMARLETRQSQR*SGQQQE
Trigger: CTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCT...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
3UTR-3UTR TCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACCCAGCACTGAGACAATaGGTAGATGAGAATGTAGAA +
Preference number: 2 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNPALRQ*VDENVE
Trigger: TTCTACATTCTCATCTACTCATTGTCTCAGTGCTGG...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
3UTR-3UTR CAA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACCAAGGGACGGGACGCTaGGGATCCTGGCTGGTACGA +
Preference number: 3 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNQGTGR*GSWLVR
Trigger: TCGTACCAGCCAGGATCCCAAGCGTCCCGTCCCTTG...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
3UTR CCA 72 bp GTTGAGCTTGCTTTATGGATGACAAGTGGGCTAGGCTaGGCTGTCGGGGGCAGGACGAAGATTCTGGCTGAA +
Preference number: 3 (lower is better)
Translates to: VELALWMTSGLG*AVGGRTKILAE
Trigger: TTCAGCCAGAATCTTCGTCCTGCCCCCGACAGCCCAGCCTAGCCCACTTGTCATCCATAAAGCAAGCTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663595.2
3UTR TCA 72 bp CACTGTCAAATGTCAACTCCACCAGCACTGAGACAATaGGTAGATGAGAATGTAGAAAGAGGGAAGGTGGTA +
Preference number: 3 (lower is better)
Translates to: HCQMSTPPALRQ*VDENVERGKVV
Trigger: TACCACCTTCCCTCTTTCTACATTCTCATCTACTCATTGTCTCAGTGCTGGTGGAGTTGACATTTGACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCCCAGGGCACCTGTGGTaGTGCCTGCTAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: HGPARDKARGDQVSSRRGPGHLW*CLLGGG
Trigger: GCCGCCTCCTAGCAGGCAGCACCACAGGTGCCCTGG...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACGCTGTGTCTGTCGGCTaGCGGAGGGCGCGTCGGACG +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNAVSVG*RRARRT
Trigger: CGTCCGACGCGCCCTCCGCCAGCCGACAGACACAGC...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACGGGCACCTGTGGTGCTaGCTGCTAGGAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNGHLWC*LLGGGS
Trigger: GGAGCCGCCTCCTAGCAGGCAGCACCACAGGTGCCC...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCACCACATCCGTGGGCTaGGCCACAGCCACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HGPARDKARGDQVSSRRGTTSVG*ATATAR
Trigger: CCTGGCTGTGGCTGTGGCCCAGCCCACGGATGTGGT...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAAATCACACCGCGGTACTaGGCGCTGGCTGTAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQITPRY*ALAVAR
Trigger: GCGCGCTACAGCCAGCGCCCAGTACCGCGGTGTGAT...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCGCGCGCACTGGCCCCTaGCTTTCTCCTTGGATCTGT +
Preference number: 4 (lower is better)
Translates to: HGPARDKARGDQVSSRRGARTGP*LSPWIC
Trigger: ACAGATCCAAGGAGAAAGTCAGGGGCCAGTGCGCGC...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACCCTCCAGCCCGGGCCTaGGCTTGGAATCGGACCTTT +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNPPARA*AWNRTF
Trigger: AAAGGTCCGATTCCAAGCTCAGGCCCGGGCTGGAGG...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCGGCTGTAGCGCGCACTaGCCCCTGACTTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HGPARDKARGDQVSSRRGGCSAH*PLTFSL
Trigger: CAAGGAGAAAGTCAGGGGCCAGTGCGCGCTACAGCC...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACGGACGCTTGGGATCCTaGCTGGTACGAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNGRLGS*LVRGLP
Trigger: TGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCC...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAAAAGCTCATTTGGCGCTaGAGGCCGGCAACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQKLIWR*RPATSP
Trigger: TGGGCTGGTTGCCGGCCTGCAGCGCCAAATGAGCTT...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCACGAGCCGGGCGAGCGTaGACAGTCAATCCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAARAGRA*TVNPKA
Trigger: CGCCTTGGGATTGACTGTCCACGCTCGCCCGGCTCG...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCCGAGCCGGGCGAGCGTaGACAGTCAATCCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSRAGRA*TVNPKA
Trigger: CGCCTTGGGATTGACTGTCCACGCTCGCCCGGCTCG...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGGCTGTGTCTGTCGGCTaGCGGAGGGCGCGTCGGACG +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRAVSVG*RRARRT
Trigger: CGTCCGACGCGCCCTCCGCCAGCCGACAGACACAGC...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAATCACACCGCGGTACTaGGCGCTGGCTGTAGCGCGC +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAITPRY*ALAVAR
Trigger: GCGCGCTACAGCCAGCGCCCAGTACCGCGGTGTGAT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCCAGCCAGGGCACCTGTaGTGCTGCCTGCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSQPGHL*CCLLGG
Trigger: GCCTCCTAGCAGGCAGCACCACAGGTGCCCTGGCTG...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAACCACATCCGTGGGCTaGGCCACAGCCACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAATTSVG*ATATAR
Trigger: CCTGGCTGTGGCTGTGGCCCAGCCCACGGATGTGGT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACCCTTTACCACATCCGTaGGCTGGGCCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNPLPHP*AGPQPQ
Trigger: CTGTGGCTGTGGCCCAGCCCACGGATGTGGTAAAGG...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACGCTTGGGATCCTGGCTaGTACGAGGCCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNAWDPG*YEASHT
Trigger: AGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGC...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAACAAGTGGGCTAGGCTaGGCTGTCGGGGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAATSGLG*AVGGRT
Trigger: CGTCCTGCCCCCGACAGCCCAGCCTAGCCCACTTGT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCCCCCAAAGGCAGAAGTaGAGTGGCAAGGGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HGPARDKARGDQVSSRRGPQRQK*SGKGGH
Trigger: ATGACCTCCCTTGCCACTTCACTTCTGCCTTTGGGG...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCAGACAAAGCCAGAGGTaGTCAGGTCAGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HGPARDKARGDQVSSRRGRQSQR*SGQQQE
Trigger: CTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCT...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGAACACGGCAGTGCGTaGGGCTGTGTCTGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAEHGSA*GCVCRL
Trigger: CAGCCGACAGACACAGCCGCACGCACTGCCGTGTTC...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGGCGGCTCCCAATaGTGGCATGCTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAGGGSQ*WHAQSP
Trigger: AGGGCTCTGAGCATGCCAGCATTGGGAGCCGCCTCC...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCACCAGGGCACCTGTGGTaGTGCCTGCTAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSPGHLW*CLLGGG
Trigger: GCCGCCTCCTAGCAGGCAGCACCACAGGTGCCCTGG...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCGCGCGCACTGGCCCCTaGCTTTCTCCTTGGATCTGT +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSARTGP*LSPWIC
Trigger: ACAGATCCAAGGAGAAAGTCAGGGGCCAGTGCGCGC...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACCCCAAAGGCAGAAGTaGAGTGGCAAGGGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQPQRQK*SGKGGH
Trigger: ATGACCTCCCTTGCCACTTCACTTCTGCCTTTGGGG...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR GCA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACGATGCAGGCAGCTGTaGCAGCCCCAAGAAACTTCA +
Preference number: 4 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQRCRQL*QPQETS
Trigger: TGAAGTTTCTTGGGGCTGGCACAGCTGCCTGCATCG...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCAAAGGTGATGAGATCTaGGATGCAGGCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HGPARDKARGDQVSSRRGKGDEI*DAGSCA
Trigger: GGCACAGCTGCCTGCATCGCAGATCTCATCACCTTT...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAAAGCTCATTTGGCGCTaGAGGCCGGCAACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAKLIWR*RPATSP
Trigger: TGGGCTGGTTGCCGGCCTGCAGCGCCAAATGAGCTT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAGGGCACCTGTGGTGCTaGCTGCTAGGAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETGHLWC*LLGGGS
Trigger: GGAGCCGCCTCCTAGCAGGCAGCACCACAGGTGCCC...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCAGTGGTGCAGAAGCCTaGCCCAAAGGCAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HGPARDKARGDQVSSRRGSGAEA*PKGRSE
Trigger: TTCACTTCTGCCTTTGGGGCAGGCTTCTGCACCACT...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGCAGCCAGGGCACCTGTaGTGCTGCCTGCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRQPGHL*CCLLGG
Trigger: GCCTCCTAGCAGGCAGCACCACAGGTGCCCTGGCTG...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGACCACATCCGTGGGCTaGGCCACAGCCACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRTTSVG*ATATAR
Trigger: CCTGGCTGTGGCTGTGGCCCAGCCCACGGATGTGGT...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACATGGTAAGGGCACAGTaGCCAGCGCTACTGTACTGG +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNMVRAQ*PALLYW
Trigger: CCAGTACAGTAGCGCTGGCCACTGTGCCCTTACCAT...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAAAGGGACGGGACGCTTaGGATCCTGGCTGGTACGAG +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAKGRDA*DPGWYE
Trigger: CTCGTACCAGCCAGGATCCCAAGCGTCCCGTCCCTT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGCCTCCAGCCCGGGCCTaGGCTTGGAATCGGACCTTT +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRPPARA*AWNRTF
Trigger: AAAGGTCCGATTCCAAGCTCAGGCCCGGGCTGGAGG...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCACCTCCAGCCCGGGCCTaGGCTTGGAATCGGACCTTT +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSPPARA*AWNRTF
Trigger: AAAGGTCCGATTCCAAGCTCAGGCCCGGGCTGGAGG...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAATCATGTATCTCGTCTTaGCCACGTCTACAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQSCISS*PRLQGR
Trigger: CCTCCCCTGTAGACGTGGTCAAGACGAGATACATGA...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACTCATGTATCTCGTCTTaGCCACGTCTACAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNSCISS*PRLQGR
Trigger: CCTCCCCTGTAGACGTGGTCAAGACGAGATACATGA...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAAAGTGCAGGCAGCCATaGGGGCTCGTTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAKCRQP*GLVSAA
Trigger: AGCAGCTGAAACGAGCCCTCATGGCTGCCTGCACTT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGGGGAGAACACGGCAGTaGGTGCGGCTGTGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRGRTRQ*VRLCLS
Trigger: CGACAGACACAGCCGCACGCACTGCCGTGTTCTCCC...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCGGGAGAACACGGCAGTaGGTGCGGCTGTGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGGRTRQ*VRLCLS
Trigger: CGACAGACACAGCCGCACGCACTGCCGTGTTCTCCC...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGGAGGCGGCTCCCAATaGTGGCATGCTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSGGGSQ*WHAQSP
Trigger: AGGGCTCTGAGCATGCCAGCATTGGGAGCCGCCTCC...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCCAGGGCACCTGTGGTaGTGCCTGCTAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDPGHLW*CLLGGG
Trigger: GCCGCCTCCTAGCAGGCAGCACCACAGGTGCCCTGG...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACAGTGGTGCAGAAGCCTaGCCCAAAGGCAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNSGAEA*PKGRSE
Trigger: TTCACTTCTGCCTTTGGGGCAGGCTTCTGCACCACT...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCATCACACCGCGGTACTaGGCGCTGGCTGTAGCGCGC +
Preference number: 4 (lower is better)
Translates to: KKEEKESMARLETKPEVIITPRY*ALAVAR
Trigger: GCGCGCTACAGCCAGCGCCCAGTACCGCGGTGTGAT...GATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGGGACGCTTGGGATCCTaGCTGGTACGAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRGRLGS*LVRGLP
Trigger: TGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCC...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCGGACGCTTGGGATCCTaGCTGGTACGAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGGRLGS*LVRGLP
Trigger: TGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCC...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAACAAGTGGGCTAGGCTaGGCTGTCGGGGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETTSGLG*AVGGRT
Trigger: CGTCCTGCCCCCGACAGCCCAGCCTAGCCCACTTGT...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACTGGTCTTGTAGGCATTaGCGGTGCTTTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNWSCRH*RCFGIS
Trigger: GGAGATACCAAAGCACCGTCAATGCCTACAAGACCA...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAAGACAAAGCCAGAGGTaGTCAGGTCAGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAARQSQR*SGQQQE
Trigger: CTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCGAACACGGCAGTGCGTaGGGCTGTGTCTGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: KKEEKESMARLETKPEVIEHGSA*GCVCRL
Trigger: CAGCCGACAGACACAGCCGCACGCACTGCCGTGTTC...GATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAGAACACGGCAGTGCGTaGGGCTGTGTCTGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETEHGSA*GCVCRL
Trigger: CAGCCGACAGACACAGCCGCACGCACTGCCGTGTTC...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCCCATGGTCAGAATGGTaGCCATCACACCGCGGTACT +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSPWSEW*PSHRGT
Trigger: AGTACCGCGGTGTGATGGGCACCATTCTGACCATGG...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCAAGCTCATTTGGCGCTaGAGGCCGGCAACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGKLIWR*RPATSP
Trigger: TGGGCTGGTTGCCGGCCTGCAGCGCCAAATGAGCTT...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAGGAGGCGGCTCCCAATaGTGGCATGCTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETGGGSQ*WHAQSP
Trigger: AGGGCTCTGAGCATGCCAGCATTGGGAGCCGCCTCC...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCGAGCCGGGCGAGCGTaGACAGTCAATCCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDRAGRA*TVNPKA
Trigger: CGCCTTGGGATTGACTGTCCACGCTCGCCCGGCTCG...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCCTTCAAAGCTGCCAGTaGCTATCATGGCCCGATCCC +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSLQSCQ*LSWPDP
Trigger: GGGATCGGGCCATGATAGCCACTGGCAGCTTTGAAG...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGGCTGTAGCGCGCACTaGCCCCTGACTTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSGCSAH*PLTFSL
Trigger: CAAGGAGAAAGTCAGGGGCCAGTGCGCGCTACAGCC...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCGGCTGTAGCGCGCACTaGCCCCTGACTTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGGCSAH*PLTFSL
Trigger: CAAGGAGAAAGTCAGGGGCCAGTGCGCGCTACAGCC...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGCCAGGGCACCTGTaGTGCTGCCTGCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDQPGHL*CCLLGG
Trigger: GCCTCCTAGCAGGCAGCACCACAGGTGCCCTGGCTG...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAATGGTAAGGGCACAGTaGCCAGCGCTACTGTACTGG +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAMVRAQ*PALLYW
Trigger: CCAGTACAGTAGCGCTGGCCACTGTGCCCTTACCAT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACACGGGGCCCCTCCTTCTaGAGCATGGTAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETRGPSF*SMVRAQ
Trigger: CTGTGCCCTTACCATGCTCCAGAAGGAGGGGCCCCG...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGGCTTGGGATCCTGGCTaGTACGAGGCCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRAWDPG*YEASHT
Trigger: AGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGC...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGAAGGGACGGGACGCTTaGGATCCTGGCTGGTACGAG +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRKGRDA*DPGWYE
Trigger: CTCGTACCAGCCAGGATCCCAAGCGTCCCGTCCCTT...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAAGCAGGACGAAGATTCTaGCTGAACTTTCCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQAGRRF*LNFPRD
Trigger: GTCCCTTGGAAAGTTCAGCCAGAATCTTCGTCCTGC...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCATGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCT +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAACKVSR*GLQDQA
Trigger: AGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACA...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCTGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCT +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSCKVSR*GLQDQA
Trigger: AGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACA...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCATGCCAGTGGCTATCATaGCCCGATCCCCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAACQWLS*PDPLGF
Trigger: AAAACCAAGGGGATCGGGCCATGATAGCCACTGGCA...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCCCTCAGTACGCACCATaGTCAGAATGGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSPQYAP*SEWCPS
Trigger: TGATGGGCACCATTCTGACCATGGTGCGTACTGAGG...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACACCTTTACCACATCCGTaGGCTGGGCCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETPLPHP*AGPQPQ
Trigger: CTGTGGCTGTGGCCCAGCCCACGGATGTGGTAAAGG...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCACCAGCGCTACTGTACTaGCCCAGGGCAGAGTTCATG +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSPALLY*PRAEFM
Trigger: CATGAACTCTGCCCTGGGCCAGTACAGTAGCGCTGG...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAGCTTGGGATCCTGGCTaGTACGAGGCCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETAWDPG*YEASHT
Trigger: AGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGC...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp GGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAACTGGTGTAGAACTGTTTaGCAGAATCATACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GTLGILAGTRPPTLSNVNWCRTV*QNHTGR
Trigger: TCGGCCTGTATGATTCTGTCAAACAGTTCTACACCA...GTTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCGGAGGTCATCTGTCATaGGGTTGGCTTTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGGGHLS*GWLSGG
Trigger: CCCTCCTGAAAGCCAACCTCATGACAGATGACCTCC...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGGGAGGTCATCTGTCATaGGGTTGGCTTTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRGGHLS*GWLSGG
Trigger: CCCTCCTGAAAGCCAACCTCATGACAGATGACCTCC...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGTGCAGGCAGCCATaGGGGCTCGTTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETKCRQP*GLVSAA
Trigger: AGCAGCTGAAACGAGCCCTCATGGCTGCCTGCACTT...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCCGATGCAGGCAGCTGTaGCAGCCCCAAGAAACTTCA +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGRCRQL*QPQETS
Trigger: TGAAGTTTCTTGGGGCTGGCACAGCTGCCTGCATCG...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCCCATGGTCAGAATGGTaGCCATCACACCGCGGTACT +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGPWSEW*PSHRGT
Trigger: AGTACCGCGGTGTGATGGGCACCATTCTGACCATGG...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGCCATGGTCAGAATGGTaGCCATCACACCGCGGTACT +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRPWSEW*PSHRGT
Trigger: AGTACCGCGGTGTGATGGGCACCATTCTGACCATGG...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAATCATACAGGCCGATaGGGACAGAGGCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSNHTGR*GQRQSS
Trigger: TGAGCTTTGCCTCTGTCCGCATCGGCCTGTATGATT...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGCTTCAAAGCTGCCAGTaGCTATCATGGCCCGATCCC +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRLQSCQ*LSWPDP
Trigger: GGGATCGGGCCATGATAGCCACTGGCAGCTTTGAAG...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCCTACGTCCCAGGAGATaGAGAAAAACTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSLRPRR*RKTGDR
Trigger: CCTGTCTCCAGTTTTTCTCCATCTCCTGGGACGTAG...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACACCAGCGCTACTGTACTaGCCCAGGGCAGAGTTCATG +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETPALLY*PRAEFM
Trigger: CATGAACTCTGCCCTGGGCCAGTACAGTAGCGCTGG...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGGAGAAAGGAGGGCATaGACCCTTTGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSGERRA*TLCRRL
Trigger: GAGCCTTCTACAAAGGGTTCATGCCCTCCTTTCTCC...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGGGAGAAAGGAGGGCATaGACCCTTTGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRGERRA*TLCRRL
Trigger: GAGCCTTCTACAAAGGGTTCATGCCCTCCTTTCTCC...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR GCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAAAAGGTGATGAGATCTaGGATGCAGGCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSKGDEI*DAGSCA
Trigger: GGCACAGCTGCCTGCATCGCAGATCTCATCACCTTT...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCACATTACGAGCAACATTaGGAGAGGTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAHYEQH*ERSLSR
Trigger: TCTGGAAAGGGACCTCTCCCAATGTTGCTCGTAATG...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCCATTACGAGCAACATTaGGAGAGGTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KGKHGPARDKARGDQVSSHYEQH*ERSLSR
Trigger: TCTGGAAAGGGACCTCTCCCAATGTTGCTCGTAATG...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCATTTATGGATGACAAGTaGGCTAGGCTGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSFMDDK*ARLGCR
Trigger: CCGACAGCCCAGCCTAGCCCACTTGTCATCCATAAA...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACATGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCT +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETCKVSR*GLQDQA
Trigger: AGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACA...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCATGGTGTAGAACTGTTTaGCAGAATCATACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAAWCRTV*QNHTGR
Trigger: TCGGCCTGTATGATTCTGTCAAACAGTTCTACACCA...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTGGTCTTGTAGGCATTaGCGGTGCTTTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGWSCRH*RCFGIS
Trigger: GGAGATACCAAAGCACCGTCAATGCCTACAAGACCA...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCCCAGCTCAGCACAGTTaGCAATGGCATTACGAGCAA +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGPAQHS*QWHYEQ
Trigger: TTGCTCGTAATGCCATTGTCAACTGTGCTGAGCTGG...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCACCAGCTCAGCACAGTTaGCAATGGCATTACGAGCAA +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSPAQHS*QWHYEQ
Trigger: TTGCTCGTAATGCCATTGTCAACTGTGCTGAGCTGG...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCGACGAAGATTCTGGCTaGACTTTCCAAGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: KKEEKESMARLETKPEVIDEDSG*TFQGTG
Trigger: TCCCGTCCCTTGGAAAGTTCAGCCAGAATCTTCGTC...GATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAAAGGTGATGAGATCTaGGATGCAGGCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KKEEKESMARLETKPEVIKGDEI*DAGSCA
Trigger: GGCACAGCTGCCTGCATCGCAGATCTCATCACCTTT...GATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGAATCATACAGGCCGATaGGGACAGAGGCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRNHTGR*GQRQSS
Trigger: TGAGCTTTGCCTCTGTCCGCATCGGCCTGTATGATT...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCTTCAAAGCTGCCAGTaGCTATCATGGCCCGATCCC +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDLQSCQ*LSWPDP
Trigger: GGGATCGGGCCATGATAGCCACTGGCAGCTTTGAAG...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGCTACGTCCCAGGAGATaGAGAAAAACTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRLRPRR*RKTGDR
Trigger: CCTGTCTCCAGTTTTTCTCCATCTCCTGGGACGTAG...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACACCTCAGTACGCACCATaGTCAGAATGGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETPQYAP*SEWCPS
Trigger: TGATGGGCACCATTCTGACCATGGTGCGTACTGAGG...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGAAGGCAGAAGTGAAGTaGCAAGGGAGGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRKAEVK*QGRSSV
Trigger: GACAGATGACCTCCCTTGCCACTTCACTTCTGCCTT...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGGCAGGACGAAGATTCTaGCTGAACTTTCCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: KEEKESMARLETKPEVIRAGRRF*LNFPRD
Trigger: GTCCCTTGGAAAGTTCAGCCAGAATCTTCGTCCTGC...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCTTTATGGATGACAAGTaGGCTAGGCTGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: KKEEKESMARLETKPEVIFMDDK*ARLGCR
Trigger: CCGACAGCCCAGCCTAGCCCACTTGTCATCCATAAA...GATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR TCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATGACGAAGATTCTGGCTaGACTTTCCAAGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDDEDSG*TFQGTG
Trigger: TCCCGTCCCTTGGAAAGTTCAGCCAGAATCTTCGTC...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAATCATACAGGCCGATaGGGACAGAGGCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETNHTGR*GQRQSS
Trigger: TGAGCTTTGCCTCTGTCCGCATCGGCCTGTATGATT...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCATCCATAGAAAATGGGTaGGAGACGAAACACCTAATG +
Preference number: 4 (lower is better)
Translates to: KESMARLETKPEVIRSAASIENG*ETKHLM
Trigger: CATTAGGTGTTTCGTCTCCCACCCATTTTCTATGGA...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATTGCCAGTGGCTATCATaGCCCGATCCCCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDCQWLS*PDPLGF
Trigger: AAAACCAAGGGGATCGGGCCATGATAGCCACTGGCA...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCCTACGTCCCAGGAGATaGAGAAAAACTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: KKEEKESMARLETKPEVILRPRR*RKTGDR
Trigger: CCTGTCTCCAGTTTTTCTCCATCTCCTGGGACGTAG...GATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCCTCAGTACGCACCATaGTCAGAATGGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDPQYAP*SEWCPS
Trigger: TGATGGGCACCATTCTGACCATGGTGCGTACTGAGG...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAGCAGGACGAAGATTCTaGCTGAACTTTCCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETAGRRF*LNFPRD
Trigger: GTCCCTTGGAAAGTTCAGCCAGAATCTTCGTCCTGC...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGTTGAGCTTGCTTTATaGATGACAAGTGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: EEKESMARLETKPEVIRSVELAL*MTSGLG
Trigger: GCCTAGCCCACTTGTCATCCATAAAGCAAGCTCAAC...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663595.2
CDS-3UTR TCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATTGGTCTTGTAGGCATTaGCGGTGCTTTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDWSCRH*RCFGIS
Trigger: GGAGATACCAAAGCACCGTCAATGCCTACAAGACCA...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCCAGCTCAGCACAGTTaGCAATGGCATTACGAGCAA +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDPAQHS*QWHYEQ
Trigger: TTGCTCGTAATGCCATTGTCAACTGTGCTGAGCTGG...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCCATTACGAGCAACATTaGGAGAGGTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KKEEKESMARLETKPEVIHYEQH*ERSLSR
Trigger: TCTGGAAAGGGACCTCTCCCAATGTTGCTCGTAATG...GATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCCCAGCACTGAGACAATaGGTAGATGAGAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: REGKEGRERRKKRKAWPGPALRQ*VDENVE
Trigger: TTCTACATTCTCATCTACTCATTGTCTCAGTGCTGG...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR GCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATGAGATAGAGGAACTCTaGCGGAATACCACAAGACAG +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDEIEEL*RNTTRQ
Trigger: CTGTCTTGTGGTATTCCGGCAGAGTTCCTCTATCTC...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310473.9
CDS-3UTR TCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACACCAGCACTGAGACAATaGGTAGATGAGAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETPALRQ*VDENVE
Trigger: TTCTACATTCTCATCTACTCATTGTCTCAGTGCTGG...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACATCCATAGAAAATGGGTaGGAGACGAAACACCTAATG +
Preference number: 4 (lower is better)
Translates to: EGGKRKKEEKESMARLETSIENG*ETKHLM
Trigger: CATTAGGTGTTTCGTCTCCCACCCATTTTCTATGGA...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CCA 90 bp AAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCTCCATAGAAAATGGGTaGGAGACGAAACACCTAATG +
Preference number: 4 (lower is better)
Translates to: KKEEKESMARLETKPEVISIENG*ETKHLM
Trigger: CATTAGGTGTTTCGTCTCCCACCCATTTTCTATGGA...GATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR TCA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCCAGCACTGAGACAATaGGTAGATGAGAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: KEGRKGKHGPARDKARGDPALRQ*VDENVE
Trigger: TTCTACATTCTCATCTACTCATTGTCTCAGTGCTGG...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS CCA 90 bp AGCCGCAGGGAGAACACGGCAGTGCGTGCGGCTGTGTCTGTCGGCTaGCGGAGGGCGCGTCGGACGAGCCGGGCGAGCGTGGACAGTCAA +
Preference number: 5 (lower is better)
Translates to: SRRENTAVRAAVSVG*RRARRTSRASVDSQ
Trigger: TTGACTGTCCACGCTCGCCCGGCTCGTCCGACGCGCCCTCCGCCAGCCGACAGACACAGCCGCACGCACTGCCGTGTTCTCCCTGCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000539330.1
ENST00000541027.5
ENST00000542615.5
ENST00000543714.5
ENST00000663595.2
CDS GCA 90 bp CAGCCAGGGCACCTGTGGTGCTGCCTGCTAGGAGGCGGCTCCCAATaGTGGCATCTGTGGGCGAGCCATGGGGTCAGTGGCCAGCGGGCT +
Preference number: 5 (lower is better)
Translates to: QPGHLWCCLLGGGSQ*WHLWASHGVSGQRA
Trigger: AGCCCGCTGGCCACTGACCCCATGGCTCGCCCACAGATGCCAGCATTGGGAGCCGCCTCCTAGCAGGCAGCACCACAGGTGCCCTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545562.2
CDS CCA 90 bp CCAGGGCACCTGTGGTGCTGCCTGCTAGGAGGCGGCTCCCAATGCTaGCATCTGTGGGCGAGCCATGGGGTCAGTGGCCAGCGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: PGHLWCCLLGGGSQC*HLWASHGVSGQRAC
Trigger: GCAAGCCCGCTGGCCACTGACCCCATGGCTCGCCCACAGATGCCAGCATTGGGAGCCGCCTCCTAGCAGGCAGCACCACAGGTGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545562.2
CDS GCA 90 bp TGGTCATACTATGTGTCCGAGCCGCAGGGAGAACACGGCAGTGCGTaGGGCTGTGTCTGTCGGCTGGCGGAGGGCGCGTCGGACGAGCCG +
Preference number: 5 (lower is better)
Translates to: WSYYVSEPQGEHGSA*GCVCRLAEGASDEP
Trigger: CGGCTCGTCCGACGCGCCCTCCGCCAGCCGACAGACACAGCCGCACGCACTGCCGTGTTCTCCCTGCGGCTCGGACACATAGTATGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000539330.1
ENST00000541027.5
ENST00000542615.5
ENST00000543714.5
ENST00000663595.2
CDS GCA 90 bp CTAATGGTCATACTATGTGTCCGAGCCGCAGGGAGAACACGGCAGTaGGTGCGGCTGTGTCTGTCGGCTGGCGGAGGGCGCGTCGGACGA +
Preference number: 5 (lower is better)
Translates to: LMVILCVRAAGRTRQ*VRLCLSAGGGRVGR
Trigger: TCGTCCGACGCGCCCTCCGCCAGCCGACAGACACAGCCGCACGCACTGCCGTGTTCTCCCTGCGGCTCGGACACATAGTATGACCATTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000539330.1
ENST00000541027.5
ENST00000542615.5
ENST00000543714.5
ENST00000663595.2
CDS CCA 90 bp GGTGCCCATCACACCGCGGTACTGGGCGCTGGCTGTAGCGCGCACTaGCCCCTGACTTTCTCCTTGGATCTGCAAGGCCAAGACAGGGTA +
Preference number: 5 (lower is better)
Translates to: GAHHTAVLGAGCSAH*PLTFSLDLQGQDRV
Trigger: TACCCTGTCTTGGCCTTGCAGATCCAAGGAGAAAGTCAGGGGCCAGTGCGCGCTACAGCCAGCGCCCAGTACCGCGGTGTGATGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544615.5
CDS TCA 90 bp AGAGGCCCCGGAACCCTTCCTCTCGGGCAATGGTCTTGTAGGCATTaGCGGTGCTTTGGTATCTCCGACCACCTCCAGCCCGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RGPGTLPLGQWSCRH*RCFGISDHLQPGPE
Trigger: CTCAGGCCCGGGCTGGAGGTGGTCGGAGATACCAAAGCACCGTCAATGCCTACAAGACCATTGCCCGAGAGGAAGGGTTCCGGGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000544615.5
ENST00000545212.1
ENST00000545562.2
ENST00000663595.2
CDS-3UTR CAA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCCAAGGGACGGGACGCTaGGGATCCTGGCTGGTACGA +
Preference number: 5 (lower is better)
Translates to: HGPARDKARGDQVSSRRGQGTGR*GSWLVR
Trigger: TCGTACCAGCCAGGATCCCAAGCGTCCCGTCCCTTG...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAAAGCCCGGGCCTGAGCTaGGAATCGGACCTTTACCAC +
Preference number: 5 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQSPGLS*ESDLYH
Trigger: GTGGTAAAGGTCCGATTCCAAGCTCAGGCCCGGGCT...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS TCA 90 bp GGGACCAAGATCCTTGGCTTGTCCGAGTCAGCTGAAGGGCCAGAATaGGAGCGGGGAGGTGTGAGAGTGCTCTGTGAACTGGAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: GTKILGLSESAEGPE*ERGGVRVLCELERA
Trigger: GGCTCTTTCCAGTTCACAGAGCACTCTCACACCTCCCCGCTCTCATTCTGGCCCTTCAGCTGACTCGGACAAGCCAAGGATCTTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539330.1
CDS-3UTR CAA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAAGCCCGGGCCTGAGCTaGGAATCGGACCTTTACCAC +
Preference number: 5 (lower is better)
Translates to: KESMARLETKPEVIRSAASPGLS*ESDLYH
Trigger: GTGGTAAAGGTCCGATTCCAAGCTCAGGCCCGGGCT...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp AAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCGGCATTGACGGTGCTTaGGTATCTCCGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: KGKHGPARDKARGDQVSSGIDGA*VSPTTS
Trigger: GGAGGTGGTCGGAGATACCAAAGCACCGTCAATGCC...GCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp CGGGACGCTTGGGATCCTGGCTGGTACGAGGCCTCCCACACTGTCAAATGTCAAGCATTACGAGCAACATaGGGAGAGGTCCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: RDAWDPGWYEASHTVKCQALRAT*GEVPFQ
Trigger: CTGGAAAGGGACCTCTCCCAATGTTGCTCGTAATGC...TTGACATTTGACAGTGTGGGAGGCCTCGTACCAGCCAGGATCCCAAGCGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp CATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGGAGAGGCTTCATGTATCTCGTCTaGACCACGTCTACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: HGPARDKARGDQVSSRRGFMYLV*TTSTGE
Trigger: CTCCCCTGTAGACGTGGTCAAGACGAGATACATGAA...GCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS-3UTR CAA 90 bp AAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGCAAGGGACGGGACGCTaGGGATCCTGGCTGGTACGA +
Preference number: 5 (lower is better)
Translates to: KEEKESMARLETKPEVIRQGTGR*GSWLVR
Trigger: TCGTACCAGCCAGGATCCCAAGCGTCCCGTCCCTTG...CCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCACAAGGGACGGGACGCTaGGGATCCTGGCTGGTACGA +
Preference number: 5 (lower is better)
Translates to: EEKESMARLETKPEVIRSQGTGR*GSWLVR
Trigger: TCGTACCAGCCAGGATCCCAAGCGTCCCGTCCCTTG...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS TCA 90 bp GGGATGAGGGGTCCAGGTCAGAGCCGGCTTTGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCTTCTCTAAAGGTGTCCCGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GMRGPGQSRLCKVSR*GLQDQASLKVSRSS
Trigger: TGAAGAACGGGACACCTTTAGAGAAGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACAAAGCCGGCTCTGACCTGGACCCCTCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000541027.5
CDS CCA 90 bp TCCTTCTGGAGCATGGTAAGGGCACAGTGGCCAGCGCTACTGTACTaGCCCAGGGCAGAGTTCATGTATCTCGTCTTGACCACGTCTACA +
Preference number: 5 (lower is better)
Translates to: SFWSMVRAQWPALLY*PRAEFMYLVLTTST
Trigger: TGTAGACGTGGTCAAGACGAGATACATGAACTCTGCCCTGGGCCAGTACAGTAGCGCTGGCCACTGTGCCCTTACCATGCTCCAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000544615.5
ENST00000663595.2
CDS-3UTR CAA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAAGCCCGGGCCTGAGCTaGGAATCGGACCTTTACCAC +
Preference number: 5 (lower is better)
Translates to: EEKESMARLETKPEVIRSSPGLS*ESDLYH
Trigger: GTGGTAAAGGTCCGATTCCAAGCTCAGGCCCGGGCT...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCAGAACCTGTCATGAGGTaGGCTTTCAGGAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: KESMARLETKPEVIRSAAEPVMR*AFRRAS
Trigger: GGATGCCCTCCTGAAAGCCAACCTCATGACAGGTTC...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536983.5
CDS-3UTR CAA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGGCACATCTGTGGCCTaGAACCCAACCATGATGCTG +
Preference number: 5 (lower is better)
Translates to: EEKESMARLETKPEVIRSGTSVA*NPTMML
Trigger: CAGCATCATGGTTGGGTTCAAGGCCACAGATGTGCC...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp AGAGAAGGGAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCGGCACATCTGTGGCCTaGAACCCAACCATGATGCTG +
Preference number: 5 (lower is better)
Translates to: REGKEGRERRKKRKAWPGGTSVA*NPTMML
Trigger: CAGCATCATGGTTGGGTTCAAGGCCACAGATGTGCC...GCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTCCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAGGCATTGACGGTGCTTaGGTATCTCCGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: EGGKRKKEEKESMARLETGIDGA*VSPTTS
Trigger: GGAGGTGGTCGGAGATACCAAAGCACCGTCAATGCC...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp AAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCAGCATTCATGTATCTCGTCTaGACCACGTCTACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: KESMARLETKPEVIRSAAFMYLV*TTSTGE
Trigger: CTCCCCTGTAGACGTGGTCAAGACGAGATACATGAA...TGCTGCTGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS TCA 90 bp GCTTCTGTGGTTCATCTGGAGAGCCGGCTTTGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCTTCTCTAAAGGTGTCCCGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ASVVHLESRLCKVSR*GLQDQASLKVSRSS
Trigger: TGAAGAACGGGACACCTTTAGAGAAGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACAAAGCCGGCTCTCCAGATGAACCACAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542615.5
CDS-3UTR CAA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATGGCATTGACGGTGCTTaGGTATCTCCGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: KEGRKGKHGPARDKARGDGIDGA*VSPTTS
Trigger: GGAGGTGGTCGGAGATACCAAAGCACCGTCAATGCC...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS-3UTR CAA 90 bp GAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATCAGGTCAGCATTACGAGCAACATaGGGAGAGGTCCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: EEKESMARLETKPEVIRSALRAT*GEVPFQ
Trigger: CTGGAAAGGGACCTCTCCCAATGTTGCTCGTAATGC...TGACCTGATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS TCA 90 bp TCTTCCTTGGACTGGACTCTTACCCGGCTTTGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCTTCTCTAAAGGTGTCCCGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SSLDWTLTRLCKVSR*GLQDQASLKVSRSS
Trigger: TGAAGAACGGGACACCTTTAGAGAAGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACAAAGCCGGGTAAGAGTCCAGTCCAAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539330.1
CDS TCA 90 bp TTAGGTGCTGGTGAAGCAATTCCTGCTCAAGCAGTCAATACTTCATaGAGGGCTCCCTCCCTTTCACTGCAGGGAGAGTCTGGATCAGAG +
Preference number: 5 (lower is better)
Translates to: LGAGEAIPAQAVNTS*RAPSLSLQGESGSE
Trigger: CTCTGATCCAGACTCTCCCTGCAGTGAAAGGGAGGGAGCCCTTCATGAAGTATTGACTGCTTGAGCAGGAATTGCTTCACCAGCACCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542615.5
CDS TCA 90 bp AGGGAAAACCGATGTGAGCTCGAGAGGCACTCAGTTAGGTGCTGGTaGAGCAATTCCTGCTCAAGCAGTCAATACTTCATGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RENRCELERHSVRCW*SNSCSSSQYFMKGS
Trigger: GGAGCCCTTCATGAAGTATTGACTGCTTGAGCAGGAATTGCTTCACCAGCACCTAACTGAGTGCCTCTCGAGCTCACATCGGTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542615.5
CDS GCA 90 bp CGCTGCCTCATAAACAGCCACTGGACCAGCCCTTTGTCTGCTGTATaGAGAGATTTCACTGATGATGCCCACATTCCTGCTTCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: RCLINSHWTSPLSAV*RDFTDDAHIPASVV
Trigger: AACCACAGAAGCAGGAATGTGGGCATCATCAGTGAAATCTCTGCATACAGCAGACAAAGGGCTGGTCCAGTGGCTGTTTATGAGGCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541027.5
ENST00000542615.5
CDS-3UTR CAA 90 bp GAAGGAGGGAAGAGAAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAGCATTACGAGCAACATaGGGAGAGGTCCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: EGGKRKKEEKESMARLETALRAT*GEVPFQ
Trigger: CTGGAAAGGGACCTCTCCCAATGTTGCTCGTAATGC...TGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTTCTCTTCCCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS TCA 90 bp CCCCAGGCACAGACAGGGCCTTTCACAAGGAAAGTTCTCACAGGCTaGTTAAACAGTACTGAGAAGGCTCAGGCAAATGGTATCCCTTCT +
Preference number: 5 (lower is better)
Translates to: PQAQTGPFTRKVLTG*LNSTEKAQANGIPS
Trigger: AGAAGGGATACCATTTGCCTGAGCCTTCTCAGTACTGTTTAATCAGCCTGTGAGAACTTTCCTTGTGAAAGGCCCTGTCTGTGCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539764.1
CDS-3UTR CAA 90 bp AAAGAAGGAAGAAAAGGAAAGCATGGCCCGGCTAGAGACAAAGCCAGAGGTGATTCATCTGTCATGAGGTaGGCTTTCAGGAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: KEGRKGKHGPARDKARGDSSVMR*AFRRAS
Trigger: GGATGCCCTCCTGAAAGCCAACCTCATGACAGATGA...ATCACCTCTGGCTTTGTCTCTAGCCGGGCCATGCTTTCCTTTTCTTCCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000663595.2
CDS CCA 90 bp CTTGAACCCAACCATGATGCTGATTTCCTGCTACGTCCCAGGAGATaGAGAAAAACTGGAGACAGGGGCACCTTTAATCAGCAACAAGAC +
Preference number: 5 (lower is better)
Translates to: LEPNHDADFLLRPRR*RKTGDRGTFNQQQD
Trigger: GTCTTGTTGCTGATTAAAGGTGCCCCTGTCTCCAGTTTTTCTCCATCTCCTGGGACGTAGCAGGAAATCAGCATCATGGTTGGGTTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000539764.1
ENST00000543714.5
ENST00000663595.2
CDS CCA 72 bp GCTGGCGGAGGGCGCGTCGGACGAGCCGGGCGAGCGTaGACAGTCAATCCCAAGGCGCGCGCAGCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: AGGGRVGRAGRA*TVNPKARAAGL
Trigger: AAGCCCAGCTGCGCGCGCCTTGGGATTGACTGTCCACGCTCGCCCGGCTCGTCCGACGCGCCCTCCGCCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310473.9
ENST00000539330.1
ENST00000541027.5
ENST00000542615.5
ENST00000543714.5
ENST00000663595.2
CDS CCA 72 bp GAGAACACGGCAGTGCGTGCGGCTGTGTCTGTCGGCTaGCGGAGGGCGCGTCGGACGAGCCGGGCGAGCGTG +
Preference number: 6 (lower is better)
Translates to: ENTAVRAAVSVG*RRARRTSRASV
Trigger: CACGCTCGCCCGGCTCGTCCGACGCGCCCTCCGCCAGCCGACAGACACAGCCGCACGCACTGCCGTGTTCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000539330.1
ENST00000541027.5
ENST00000542615.5
ENST00000543714.5
ENST00000663595.2
CDS GCA 72 bp TATGTGTCCGAGCCGCAGGGAGAACACGGCAGTGCGTaGGGCTGTGTCTGTCGGCTGGCGGAGGGCGCGTCG +
Preference number: 6 (lower is better)
Translates to: YVSEPQGEHGSA*GCVCRLAEGAS
Trigger: CGACGCGCCCTCCGCCAGCCGACAGACACAGCCGCACGCACTGCCGTGTTCTCCCTGCGGCTCGGACACATA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000539330.1
ENST00000541027.5
ENST00000542615.5
ENST00000543714.5
ENST00000663595.2
CDS GCA 72 bp CACCTGTGGTGCTGCCTGCTAGGAGGCGGCTCCCAATaGTGGCATCTGTGGGCGAGCCATGGGGTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: HLWCCLLGGGSQ*WHLWASHGVSG
Trigger: GCCACTGACCCCATGGCTCGCCCACAGATGCCAGCATTGGGAGCCGCCTCCTAGCAGGCAGCACCACAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545562.2
CDS CCA 72 bp CTGTGGTGCTGCCTGCTAGGAGGCGGCTCCCAATGCTaGCATCTGTGGGCGAGCCATGGGGTCAGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LWCCLLGGGSQC*HLWASHGVSGQ
Trigger: CTGGCCACTGACCCCATGGCTCGCCCACAGATGCCAGCATTGGGAGCCGCCTCCTAGCAGGCAGCACCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545562.2
CDS CCA 72 bp CGGGGCCCCTCCTTCTGGAGCATGGTAAGGGCACAGTaGCCAGCGCTACTGTACTGGCCCAGGGCAGAGTTC +
Preference number: 6 (lower is better)
Translates to: RGPSFWSMVRAQ*PALLYWPRAEF
Trigger: GAACTCTGCCCTGGGCCAGTACAGTAGCGCTGGCCACTGTGCCCTTACCATGCTCCAGAAGGAGGGGCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000544615.5
ENST00000663595.2
CDS CCA 72 bp CACACCGCGGTACTGGGCGCTGGCTGTAGCGCGCACTaGCCCCTGACTTTCTCCTTGGATCTGCAAGGCCAA +
Preference number: 6 (lower is better)
Translates to: HTAVLGAGCSAH*PLTFSLDLQGQ
Trigger: TTGGCCTTGCAGATCCAAGGAGAAAGTCAGGGGCCAGTGCGCGCTACAGCCAGCGCCCAGTACCGCGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544615.5
CDS CCA 72 bp CATTGTAGAGGCTTCGGGGGCCCTCAGTACGCACCATaGTCAGAATGGTGCCCATCACACCGCGGTACTGGG +
Preference number: 6 (lower is better)
Translates to: HCRGFGGPQYAP*SEWCPSHRGTG
Trigger: CCCAGTACCGCGGTGTGATGGGCACCATTCTGACCATGGTGCGTACTGAGGGCCCCCGAAGCCTCTACAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000544615.5
ENST00000663595.2
CDS CAA 72 bp CTCTCGGGCAATGGTCTTGTAGGCATTGACGGTGCTTaGGTATCTCCGACCACCTCCAGCCCGGGCCTGAGC +
Preference number: 6 (lower is better)
Translates to: LSGNGLVGIDGA*VSPTTSSPGLS
Trigger: GCTCAGGCCCGGGCTGGAGGTGGTCGGAGATACCAAAGCACCGTCAATGCCTACAAGACCATTGCCCGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000544615.5
ENST00000545212.1
ENST00000545562.2
ENST00000663595.2
CDS CAA 72 bp GCTGGCTGTAGCGCGCACTGGCCCCTGACTTTCTCCTaGGATCTGCAAGGCCAAGACAGGGTAGCTACAGGG +
Preference number: 6 (lower is better)
Translates to: AGCSAHWPLTFS*DLQGQDRVATG
Trigger: CCCTGTAGCTACCCTGTCTTGGCCTTGCAGATCCAAGGAGAAAGTCAGGGGCCAGTGCGCGCTACAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544615.5
CDS TCA 72 bp CGGTACTGGGCGCTGGCTGTAGCGCGCACTGGCCCCTaGCTTTCTCCTTGGATCTGTAACCGGACTTTAGCA +
Preference number: 6 (lower is better)
Translates to: RYWALAVARTGP*LSPWICNRTLA
Trigger: TGCTAAAGTCCGGTTACAGATCCAAGGAGAAAGTCAGGGGCCAGTGCGCGCTACAGCCAGCGCCCAGTACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000663595.2
CDS TCA 72 bp GGGGGATCCGCACTTACACCACAAGACAGGCAGGGATaGGGGGTCCAGGTCAGAGCCGGCTTTGTAAGGTCT +
Preference number: 6 (lower is better)
Translates to: GGSALTPQDRQG*GVQVRAGFVRS
Trigger: AGACCTTACAAAGCCGGCTCTGACCTGGACCCCTCATCCCTGCCTGTCTTGTGGTGTAAGTGCGGATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541027.5
CDS CAA 90 bp GAACCCTTCCTCTCGGGCAATGGTCTTGTAGGCATTGACGGTGCTTaGGTATCTCCGACCACCTCCAGCCCGGGCCTGAGCTTGGAATCG +
Preference number: 6 (lower is better)
Translates to: EPFLSGNGLVGIDGA*VSPTTSSPGLSLES
Trigger: CGATTCCAAGCTCAGGCCCGGGCTGGAGGTGGTCGGAGATACCAAAGCACCGTCAATGCCTACAAGACCATTGCCCGAGAGGAAGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000544615.5
ENST00000545212.1
ENST00000545562.2
ENST00000663595.2
CDS CAA 90 bp GTACTGGGCGCTGGCTGTAGCGCGCACTGGCCCCTGACTTTCTCCTaGGATCTGCAAGGCCAAGACAGGGTAGCTACAGGGATAAGCATG +
Preference number: 6 (lower is better)
Translates to: VLGAGCSAHWPLTFS*DLQGQDRVATGISM
Trigger: CATGCTTATCCCTGTAGCTACCCTGTCTTGGCCTTGCAGATCCAAGGAGAAAGTCAGGGGCCAGTGCGCGCTACAGCCAGCGCCCAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544615.5
CDS CAA 90 bp CCAGCGCTACTGTACTGGCCCAGGGCAGAGTTCATGTATCTCGTCTaGACCACGTCTACAGGGGAGGCGATGACAGTGGTGCAGAAGCCT +
Preference number: 6 (lower is better)
Translates to: PALLYWPRAEFMYLV*TTSTGEAMTVVQKP
Trigger: AGGCTTCTGCACCACTGTCATCGCCTCCCCTGTAGACGTGGTCAAGACGAGATACATGAACTCTGCCCTGGGCCAGTACAGTAGCGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310473.9
ENST00000544615.5
ENST00000545212.1
ENST00000663595.2
CDS TCA 72 bp GGAACCCTTCCTCTCGGGCAATGGTCTTGTAGGCATTaGCGGTGCTTTGGTATCTCCGACCACCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GTLPLGQWSCRH*RCFGISDHLQP
Trigger: GGGCTGGAGGTGGTCGGAGATACCAAAGCACCGTCAATGCCTACAAGACCATTGCCCGAGAGGAAGGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000544615.5
ENST00000545212.1
ENST00000545562.2
ENST00000663595.2
CDS TCA 72 bp AGGAACTCTGCCGGAATACCACAAGACAGGCAGGGATaGGGGGTCCAGGTCAGAGCCGGCTTTGTAAGGTCT +
Preference number: 6 (lower is better)
Translates to: RNSAGIPQDRQG*GVQVRAGFVRS
Trigger: AGACCTTACAAAGCCGGCTCTGACCTGGACCCCTCATCCCTGCCTGTCTTGTGGTATTCCGGCAGAGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310473.9
CDS TCA 72 bp ATCCTTGGCTTGTCCGAGTCAGCTGAAGGGCCAGAATaGGAGCGGGGAGGTGTGAGAGTGCTCTGTGAACTG +
Preference number: 6 (lower is better)
Translates to: ILGLSESAEGPE*ERGGVRVLCEL
Trigger: CAGTTCACAGAGCACTCTCACACCTCCCCGCTCTCATTCTGGCCCTTCAGCTGACTCGGACAAGCCAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539330.1
CDS CCA 72 bp AGCATGGTAAGGGCACAGTGGCCAGCGCTACTGTACTaGCCCAGGGCAGAGTTCATGTATCTCGTCTTGACC +
Preference number: 6 (lower is better)
Translates to: SMVRAQWPALLY*PRAEFMYLVLT
Trigger: GGTCAAGACGAGATACATGAACTCTGCCCTGGGCCAGTACAGTAGCGCTGGCCACTGTGCCCTTACCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310473.9
ENST00000544615.5
ENST00000663595.2
CDS CAA 72 bp CTGTACTGGCCCAGGGCAGAGTTCATGTATCTCGTCTaGACCACGTCTACAGGGGAGGCGATGACAGTGGTG +
Preference number: 6 (lower is better)
Translates to: LYWPRAEFMYLV*TTSTGEAMTVV
Trigger: CACCACTGTCATCGCCTCCCCTGTAGACGTGGTCAAGACGAGATACATGAACTCTGCCCTGGGCCAGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310473.9
ENST00000544615.5
ENST00000545212.1
ENST00000663595.2
CDS CAA 72 bp TCCTGTCCTAGCTCTTCTGCTGGCTCCCGGGATGACTaGGGGCCAATCACTGTTACACGTGGGCCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: SCPSSSAGSRDD*GPITVTRGPQF
Trigger: AAACTGAGGCCCACGTGTAACAGTGATTGGCCCCAAGTCATCCCGGGAGCCAGCAGAAGAGCTAGGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539330.1
CDS TCA 72 bp GGTCCAGGTCAGAGCCGGCTTTGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCTTCTCTAAAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: GPGQSRLCKVSR*GLQDQASLKVS
Trigger: GGACACCTTTAGAGAAGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACAAAGCCGGCTCTGACCTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310473.9
ENST00000541027.5
CDS CAA 72 bp AGCTCAGCACAGTTGACAATGGCATTACGAGCAACATaGGGAGAGGTCCCTTTCCAGAGGCCCCGGAACCCT +
Preference number: 6 (lower is better)
Translates to: SSAQLTMALRAT*GEVPFQRPRNP
Trigger: AGGGTTCCGGGGCCTCTGGAAAGGGACCTCTCCCAATGTTGCTCGTAATGCCATTGTCAACTGTGCTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000544615.5
ENST00000545212.1
ENST00000545562.2
ENST00000663595.2
CDS CAA 72 bp TTGCTTTGCACTGCTGCCCAGCTCCTCAGTTCGTTCTaGCTGTTTTATCAGCCCCAGGCACAGACAGGGCCT +
Preference number: 6 (lower is better)
Translates to: LLCTAAQLLSSF*LFYQPQAQTGP
Trigger: AGGCCCTGTCTGTGCCTGGGGCTGATAAAACAGCAAGAACGAACTGAGGAGCTGGGCAGCAGTGCAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539764.1
CDS CCA 72 bp ACCACAGGGTTAGGAGGCAGCAAGAGACCTCTTCCTTaGACTGGACTCTTACCCGGCTTTGTAAGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: TTGLGGSKRPLP*TGLLPGFVRSH
Trigger: GTGAGACCTTACAAAGCCGGGTAAGAGTCCAGTCCAAGGAAGAGGTCTCTTGCTGCCTCCTAACCCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539330.1
CDS CAA 72 bp GACCACAGGGTTAGGAGGCAGCAAGAGACCTCTTCCTaGGACTGGACTCTTACCCGGCTTTGTAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: DHRVRRQQETSS*DWTLTRLCKVS
Trigger: TGAGACCTTACAAAGCCGGGTAAGAGTCCAGTCCAAGGAAGAGGTCTCTTGCTGCCTCCTAACCCTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539330.1
CDS TCA 72 bp AACTCTGCCGGAATCCGGCTTTGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCTTCTCTAAAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: NSAGIRLCKVSR*GLQDQASLKVS
Trigger: GGACACCTTTAGAGAAGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACAAAGCCGGATTCCGGCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536983.5
ENST00000543714.5
ENST00000663595.2
CDS TCA 72 bp GACTGGACTCTTACCCGGCTTTGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCTTCTCTAAAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: DWTLTRLCKVSR*GLQDQASLKVS
Trigger: GGACACCTTTAGAGAAGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACAAAGCCGGGTAAGAGTCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539330.1
CDS TCA 72 bp GTTCATCTGGAGAGCCGGCTTTGTAAGGTCTCACGGTaGGGCCTCCAAGATCAAGCTTCTCTAAAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: VHLESRLCKVSR*GLQDQASLKVS
Trigger: GGACACCTTTAGAGAAGCTTGATCTTGGAGGCCTCACCGTGAGACCTTACAAAGCCGGCTCTCCAGATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542615.5
CDS TCA 72 bp GGTGAAGCAATTCCTGCTCAAGCAGTCAATACTTCATaGAGGGCTCCCTCCCTTTCACTGCAGGGAGAGTCT +
Preference number: 6 (lower is better)
Translates to: GEAIPAQAVNTS*RAPSLSLQGES
Trigger: AGACTCTCCCTGCAGTGAAAGGGAGGGAGCCCTTCATGAAGTATTGACTGCTTGAGCAGGAATTGCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542615.5
CDS GCA 72 bp GACTTTAGCAGTATCCAGAGGAAAGGTGATGAGATCTaGGATGCAGGCAGCTGTGCCAGCCCCAAGAAACTT +
Preference number: 6 (lower is better)
Translates to: DFSSIQRKGDEI*DAGSCASPKKL
Trigger: AAGTTTCTTGGGGCTGGCACAGCTGCCTGCATCGCAGATCTCATCACCTTTCCTCTGGATACTGCTAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000543714.5
ENST00000663595.2
CDS GCA 72 bp AACTCTGCCGGAATAGGCACCAAAGCTGGTAGTATTTaGTTTGCACTGCTGCCCAGCTCCTCAGTTCGTTCT +
Preference number: 6 (lower is better)
Translates to: NSAGIGTKAGSI*FALLPSSSVRS
Trigger: AGAACGAACTGAGGAGCTGGGCAGCAGTGCAAAGCAAATACTACCAGCTTTGGTGCCTATTCCGGCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539764.1
CDS TCA 72 bp GGTATCCCTTCTCTGGGCATCAGAGATATGATGACATaGGTCTGTCACATTCCTGACCTTGAGCTGGGTTGC +
Preference number: 6 (lower is better)
Translates to: GIPSLGIRDMMT*VCHIPDLELGC
Trigger: GCAACCCAGCTCAAGGTCAGGAATGTGACAGACTCATGTCATCATATCTCTGATGCCCAGAGAAGGGATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539764.1
CDS TCA 72 bp CGATGTGAGCTCGAGAGGCACTCAGTTAGGTGCTGGTaGAGCAATTCCTGCTCAAGCAGTCAATACTTCATG +
Preference number: 6 (lower is better)
Translates to: RCELERHSVRCW*SNSCSSSQYFM
Trigger: CATGAAGTATTGACTGCTTGAGCAGGAATTGCTTCACCAGCACCTAACTGAGTGCCTCTCGAGCTCACATCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542615.5
CDS GCA 72 bp ATAAACAGCCACTGGACCAGCCCTTTGTCTGCTGTATaGAGAGATTTCACTGATGATGCCCACATTCCTGCT +
Preference number: 6 (lower is better)
Translates to: INSHWTSPLSAV*RDFTDDAHIPA
Trigger: AGCAGGAATGTGGGCATCATCAGTGAAATCTCTGCATACAGCAGACAAAGGGCTGGTCCAGTGGCTGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541027.5
ENST00000542615.5
CDS CCA 72 bp AACCATGATGCTGATTTCCTGCTACGTCCCAGGAGATaGAGAAAAACTGGAGACAGGGGCACCTTTAATCAG +
Preference number: 6 (lower is better)
Translates to: NHDADFLLRPRR*RKTGDRGTFNQ
Trigger: CTGATTAAAGGTGCCCCTGTCTCCAGTTTTTCTCCATCTCCTGGGACGTAGCAGGAAATCAGCATCATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310473.9
ENST00000536983.5
ENST00000539764.1
ENST00000543714.5
ENST00000663595.2
CDS TCA 72 bp CACAAGGAAAGTTCTCACAGGCTGATTAAACAGTACTaGGAAGGCTCAGGCAAATGGTATCCCTTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: HKESSHRLIKQY*EGSGKWYPFSG
Trigger: CCCAGAGAAGGGATACCATTTGCCTGAGCCTTCTCAGTACTGTTTAATCAGCCTGTGAGAACTTTCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539764.1
CDS TCA 72 bp CAGACAGGGCCTTTCACAAGGAAAGTTCTCACAGGCTaGTTAAACAGTACTGAGAAGGCTCAGGCAAATGGT +
Preference number: 6 (lower is better)
Translates to: QTGPFTRKVLTG*LNSTEKAQANG
Trigger: ACCATTTGCCTGAGCCTTCTCAGTACTGTTTAATCAGCCTGTGAGAACTTTCCTTGTGAAAGGCCCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539764.1