Pregenerated sensors for UCP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000109424Ensembl transcript IDs: ENST00000262999.4
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CAGAAATGGTCAAATGCAGTAGCTTATCTGCATTACATTTGCCAGGGTATATGCGACGGAGCGCGGTGTTaGGGGCCGAGTCCCCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: QKWSNAVAYLHYICQGICDGARC*GPSPRV Trigger: GACGCGGGGACTCGGCCCCCAACACCGCGCTCCGTC...GCATATACCCTGGCAAATGTAATGCAGATAAGCTACTGCATTTGACCATTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGATGTCCAGCGGGAAGGTaGTCACGTCCGCCAAGCACG | + |
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Preference number: 4 (lower is better) Translates to: CITFARVYAECFAFPFLRCPAGR*SRPPST Trigger: CGTGCTTGGCGGACGTGATCACCTTCCCGCTGGACA...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTGAGCTGATTTGCCGCTaGAGCCCCGCAGGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIIELICR*SPAGSP Trigger: CGGGCTGCCTGCGGGGCTTCAGCGGCAAATCAGCTC...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | CAGAAATGGTCAAATGCAGTAGCTTATCTGCATTACATTTGCCAGGGTATATGCCATTCACCTTGGACCTaGAGCCGGACTTTGGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: QKWSNAVAYLHYICQGICHSPWT*SRTLAV Trigger: CACGGCCAAAGTCCGGCTCCAGGTCCAAGGTGAATG...GCATATACCCTGGCAAATGTAATGCAGATAAGCTACTGCATTTGACCATTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | CAGAAATGGTCAAATGCAGTAGCTTATCTGCATTACATTTGCCAGGGTATATGCGTCGGGCATTCACCTTaGACCTGGAGCCGGACTTTG | + |
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Preference number: 4 (lower is better) Translates to: QKWSNAVAYLHYICQGICVGHSP*TWSRTL Trigger: CAAAGTCCGGCTCCAGGTCCAAGGTGAATGCCCGAC...GCATATACCCTGGCAAATGTAATGCAGATAAGCTACTGCATTTGACCATTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGCCGTGTAGCGAGGTTTaGTTCCGTGGAGATGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: MIQSARFPLVCYIIFLKLPCSEV*FRGDGS Trigger: AGAGCCATCTCCACGGAATCAAACCTCGCTACACGG...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR GCA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGGAAGTTCCTTTCCCTTaGTCTTCACGCCTGTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: MIQSARFPLVCYIIFLKLEVPFP*SSRLSA Trigger: GGCGGACAGGCGTGAAGAGCAAGGGAAAGGAACTTC...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTCCAGCTGAGAAGAGCTaGACCCCCAGGGTCGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIIPAEKS*TPRVGC Trigger: ACACCCGACCCTGGGGGTCCAGCTCTTCTCAGCTGG...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGATTTCTTTCCCTGCGGTaGGGAACTCCTGGACCGTGT | + |
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Preference number: 4 (lower is better) Translates to: CITFARVYAECFAFPFLRFLSLR*GTPGPC Trigger: ACACGGTCCAGGAGTTCCTCACCGCAGGGAAAGAAA...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR GCA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGCTCAGAGACTGGAGATaGAGAGGAAAAGGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MIQSARFPLVCYIIFLKLLRDWR*RGKGLQ Trigger: CTGGAGCCCTTTTCCTCTGCATCTCCAGTCTCTGAG...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGACTCCAGCCCCGAAGGTaGAGGAAGTTCCTTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: CITFARVYAECFAFPFLRLQPRR*RKFLSL Trigger: AAGGGAAAGGAACTTCCTCCACCTTCGGGGCTGGAG...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGTCTGTGCTTGAAGTCTaGCTTTCACGACCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: MIQSARFPLVCYIIFLKLSVLEV*LSRPLW Trigger: CCACAGAGGTCGTGAAAGTCAGACTTCAAGCACAGA...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR GCA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGACGACCTCTGTGGGTTaGCCAATGAATACTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: MIQSARFPLVCYIIFLKLTTSVG*PMNTAT Trigger: AGTGGCAGTATTCATTGGGCAACCCACAGAGGTCGT...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTAGAGCCGACACCAAGTaGCAGGGGACGTCATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIIRADTK*QGTSSA Trigger: AGCAGATGACGTCCCCTGCCACTTGGTGTCGGCTCT...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGTTTTTACCACAGCGGTaGTTGTTCCCAGGACACCTT | + |
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Preference number: 4 (lower is better) Translates to: MIQSARFPLVCYIIFLKLFLPQR*LFPGHL Trigger: AAGGTGTCCTGGGAACAATCACCGCTGTGGTAAAAA...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTCTGTGGGTTGCCCAATaGATACTGCCACTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIILWVAQ*ILPLLQ Trigger: CTGGAGGAGTGGCAGTATTCATTGGGCAACCCACAG...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGAAAGGTACCAACCCCTTaGAGAAAGCCGTTGGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: CITFARVYAECFAFPFLRKVPTP*RKPLVL Trigger: AAGGACCAACGGCTTTCTTCAAGGGGTTGGTACCTT...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR GCA 90 bp | CAGAAATGGTCAAATGCAGTAGCTTATCTGCATTACATTTGCCAGGGTATATGCGTGGAGATGGCTCTGTaGTTGAAGTCTGACTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QKWSNAVAYLHYICQGICVEMAL*LKSDFH Trigger: GTGAAAGTCAGACTTCAAGCACAGAGCCATCTCCAC...GCATATACCCTGGCAAATGTAATGCAGATAAGCTACTGCATTTGACCATTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGTCTTCACTCAGAGACTaGAGATGCAGAGGAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: MIQSARFPLVCYIIFLKLSSLRD*RCRGKG Trigger: CCCTTTTCCTCTGCATCTCCAGTCTCTGAGTGAAGA...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR GCA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGAGGAGGACATAGCTGTTaGGCAAAATCCAGCGATAAG | + |
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Preference number: 4 (lower is better) Translates to: CITFARVYAECFAFPFLRGGHSC*AKSSDK Trigger: CTTATCGCTGGATTTTGCGCAACAGCTATGTCCTCC...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR GCA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGAGTGAACACTTTCATTaGACAGTTGGGCACACTTTT | + |
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Preference number: 4 (lower is better) Translates to: MIQSARFPLVCYIIFLKLSEHFH*TVGHTF Trigger: AAAAGTGTGCCCAACTGTGCAATGAAAGTGTTCACT...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| 3UTR CAA 72 bp | GAAATGGTCAAATGCAGTAGCTTATCTGCATTACATTaGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: EMVKCSSLSALH*PGYMLNVLLSP Trigger: AGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCAGATAAGCTACTGCATTTGACCATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR TCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTGCCAGGGTATATGCTaGATGTTTTGCTTTCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIICQGIC*MFCFPL Trigger: AAGGGGAAAGCAAAACATTCAGCATATACCCTGGCA...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR GCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTGCACAGTCCATAGTCTaGCTTGACTTTGACAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIIAQSIV*LDFDSS Trigger: AGAACTGTCAAAGTCAAGGCAGACTATGGACTGTGC...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTCTTGAAGAAAGCCGTTaGTCCTTCGTTAGTGAACAC | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIILEESR*SFVSEH Trigger: GTGTTCACTAACGAAGGACCAACGGCTTTCTTCAAG...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTCTTTCATTGCACAGTTaGGCACACTTTTGTACTGTC | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIILSLHS*AHFCTV Trigger: GACAGTACAAAAGTGTGCCCAACTGTGCAATGAAAG...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CCA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGAATTGCACTCCAGAAATaGTCAAATGCAGTAGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: CITFARVYAECFAFPFLRIALQK*SNAVAY Trigger: ATAAGCTACTGCATTTGACCATTTCTGGAGTGCAAT...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR GCA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTCAAGCCTTCGGTTGTTaGTATTATTCTGTACGCATT | + |
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Preference number: 4 (lower is better) Translates to: LFVFMIQSARFPLVCYIIQAFGC*YYSVRI Trigger: AATGCGTACAGAATAATAGCAACAACCGAAGGCTTG...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS TCA 90 bp | CAGCGGGAAGGTGATCACGTCCGCCAAGCACGCCGCTATTCCAGCTaGGAAGAGCTGGACCCCCAGGGTCGGGTGTACGTCCGAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: QREGDHVRQARRYSS*EELDPQGRVYVRGC Trigger: ACAGCCTCGGACGTACACCCGACCCTGGGGGTCCAGCTCTTCTCAGCTGGAATAGCGGCGTGCTTGGCGGACGTGATCACCTTCCCGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS TCA 90 bp | CACCTTGGACCTGGAGCCGGACTTTGGCCGTGTCCAGCGGGAAGGTaGTCACGTCCGCCAAGCACGCCGCTATTCCAGCTGAGAAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: HLGPGAGLWPCPAGR*SRPPSTPLFQLRRA Trigger: AGCTCTTCTCAGCTGGAATAGCGGCGTGCTTGGCGGACGTGATCACCTTCCCGCTGGACACGGCCAAAGTCCGGCTCCAGGTCCAAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS GCA 90 bp | ATAAGTCCCCGTGTAGCGAGGTTTGATTCCGTGGAGATGGCTCTGTaGTTGAAGTCTGACTTTCACGACCTCTGTGGGTTGCCCAATGAA | + |
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Preference number: 5 (lower is better) Translates to: ISPRVARFDSVEMAL*LKSDFHDLCGLPNE Trigger: TTCATTGGGCAACCCACAGAGGTCGTGAAAGTCAGACTTCAAGCACAGAGCCATCTCCACGGAATCAAACCTCGCTACACGGGGACTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGACCTGGAGCCGGACTTaGGCCGTGTCCAGCGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MIQSARFPLVCYIIFLKLTWSRT*AVSSGK Trigger: CTTCCCGCTGGACACGGCCAAAGTCCGGCTCCAGGT...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGAAGAGGCGGAGCTGATTaGCCGCTGAAGCCCCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CITFARVYAECFAFPFLRRGGAD*PLKPRR Trigger: CCTGCGGGGCTTCAGCGGCAAATCAGCTCCGCCTCT...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGCGTCGGGCATTCACCTaGGACCTGGAGCCGGACTTT | + |
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Preference number: 5 (lower is better) Translates to: MIQSARFPLVCYIIFLKLRRAFT*DLEPDF Trigger: AAAGTCCGGCTCCAGGTCCAAGGTGAATGCCCGACG...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGCCCGATTTCTGTTTTTaGAACCGACCGCCGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: MIQSARFPLVCYIIFLKLPDFCF*NRPPGS Trigger: GCTGCCCGGCGGTCGGTTCAAAAAACAGAAATCGGG...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGGGAAGTTCCTTTCCCTaGCTCTTCACGCCTGTCCGC | + |
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Preference number: 5 (lower is better) Translates to: MIQSARFPLVCYIIFLKLGSSFP*LFTPVR Trigger: GCGGACAGGCGTGAAGAGCAAGGGAAAGGAACTTCC...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS GCA 90 bp | ATTGGGAGTAGTCCCTTTCCAAAGACCCGTCAAGCCTTCGGTTGTTaGTATTATTCTGTACGCATTATAAGTCCCCGTGTAGCGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: IGSSPFPKTRQAFGC*YYSVRIISPRVARF Trigger: AAACCTCGCTACACGGGGACTTATAATGCGTACAGAATAATAGCAACAACCGAAGGCTTGACGGGTCTTTGGAAAGGGACTACTCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGGAAGGTACCAACCCCTaGAAGAAAGCCGTTGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: MIQSARFPLVCYIIFLKLEGTNP*KKAVGP Trigger: AGGACCAACGGCTTTCTTCAAGGGGTTGGTACCTTC...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGCAGTTGGGCACACTTTaGTACTGTCCTGGTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: MIQSARFPLVCYIIFLKLQLGTL*YCPGGE Trigger: TTCTCCACCAGGACAGTACAAAAGTGTGCCCAACTG...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | TTGTTTGTTTTTATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTCACGACCTCTGTGGGTaGCCCAATGAATACTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LFVFMIQSARFPLVCYIIHDLCG*PNEYCH Trigger: GTGGCAGTATTCATTGGGCAACCCACAGAGGTCGTG...AATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCATAAAAACAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | CAGAAATGGTCAAATGCAGTAGCTTATCTGCATTACATTTGCCAGGGTATATGCCCGTCAAGCCTTCGGTaGTTGCTATTATTCTGTACG | + |
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Preference number: 5 (lower is better) Translates to: QKWSNAVAYLHYICQGICPSSLR*LLLFCT Trigger: CGTACAGAATAATAGCAACAACCGAAGGCTTGACGG...GCATATACCCTGGCAAATGTAATGCAGATAAGCTACTGCATTTGACCATTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS GCA 90 bp | TTACATCATTTTCTTGAAGCTGATTATGTGGCACAGTCCATAGTCTaGCTTGACTTTGACAGTTCTCGTTTCAGTTGTTCAAAGCACACA | + |
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Preference number: 5 (lower is better) Translates to: LHHFLEADYVAQSIV*LDFDSSRFSCSKHT Trigger: TGTGTGCTTTGAACAACTGAAACGAGAACTGTCAAAGTCAAGGCAGACTATGGACTGTGCCACATAATCAGCTTCAAGAAAATGATGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGAAGACCAGCTAAAATCTaGCTTCCTAAACTAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: CITFARVYAECFAFPFLRRPAKI*LPKLGA Trigger: AGCACCTAGTTTAGGAAGCAAGATTTTAGCTGGTCT...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGATCAAGCCTTCGGTTGTaGCTATTATTCTGTACGCAT | + |
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Preference number: 5 (lower is better) Translates to: CITFARVYAECFAFPFLRSSLRL*LLFCTH Trigger: ATGCGTACAGAATAATAGCAACAACCGAAGGCTTGA...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | ATGATCCAGTCAGCAAGATTCCCACTGGTATGTTACATCATTTTCTTGAAGCTGTCATCTGCTAATATGTaGTTTTTCACAAAGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: MIQSARFPLVCYIIFLKLSSANM*FFTKAS Trigger: GGAGGCCTTTGTGAAAAACAACATATTAGCAGATGA...CAGCTTCAAGAAAATGATGTAACATACCAGTGGGAATCTTGCTGACTGGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGAACTTTCATTGCACAGTaGGGCACACTTTTGTACTGT | + |
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Preference number: 5 (lower is better) Translates to: CITFARVYAECFAFPFLRTFIAQ*GTLLYC Trigger: ACAGTACAAAAGTGTGCCCAACTGTGCAATGAAAGT...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGACAGTTCTCGTTTCAGTaGTTCAAAGCACACAAACAT | + |
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Preference number: 5 (lower is better) Translates to: CITFARVYAECFAFPFLRQFSFQ*FKAHKH Trigger: ATGTTTGTGTGCTTTGAACAACTGAAACGAGAACTG...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | CAGAAATGGTCAAATGCAGTAGCTTATCTGCATTACATTTGCCAGGGTATATGCTTATCTGCATTACATTaGCCAGGGTATATGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: QKWSNAVAYLHYICQGICLSALH*PGYMLN Trigger: ATTCAGCATATACCCTGGCAAATGTAATGCAGATAA...GCATATACCCTGGCAAATGTAATGCAGATAAGCTACTGCATTTGACCATTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGACATTCATTCACACAATaGCACTCCAGAAATGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: CITFARVYAECFAFPFLRHSFTQ*HSRNGQ Trigger: TTGACCATTTCTGGAGTGCAATTGTGTGAATGAATG...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS-3UTR CAA 90 bp | TGCATTACATTTGCCAGGGTATATGCTGAATGTTTTGCTTTCCCCTTCTTAAGATGTTACATCATTTTCTaGAAGCTGATTATGTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: CITFARVYAECFAFPFLRCYIIF*KLIMWH Trigger: GTGCCACATAATCAGCTTCAAGAAAATGATGTAACA...TCTTAAGAAGGGGAAAGCAAAACATTCAGCATATACCCTGGCAAATGTAATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS CAA 90 bp | GCTCTTCACGCCTGTCCGCCGGGCAGCAAACCCGATTTCTGTTTTTaGAACCGACCGCCGGGCAGCGGCGGTGCAGAGGCGGCGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ALHACPPGSKPDFCF*NRPPGSGGAEAAAA Trigger: TGCAGCCGCCGCCTCTGCACCGCCGCTGCCCGGCGGTCGGTTCAAAAAACAGAAATCGGGTTTGCTGCCCGGCGGACAGGCGTGAAGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS CAA 72 bp | GCCTGTCCGCCGGGCAGCAAACCCGATTTCTGTTTTTaGAACCGACCGCCGGGCAGCGGCGGTGCAGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: ACPPGSKPDFCF*NRPPGSGGAEA Trigger: CGCCTCTGCACCGCCGCTGCCCGGCGGTCGGTTCAAAAAACAGAAATCGGGTTTGCTGCCCGGCGGACAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS TCA 72 bp | CCTGGAGCCGGACTTTGGCCGTGTCCAGCGGGAAGGTaGTCACGTCCGCCAAGCACGCCGCTATTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGAGLWPCPAGR*SRPPSTPLFQL Trigger: CAGCTGGAATAGCGGCGTGCTTGGCGGACGTGATCACCTTCCCGCTGGACACGGCCAAAGTCCGGCTCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS CCA 72 bp | TCCGCCAAGCACGCCGCTATTCCAGCTGAGAAGAGCTaGACCCCCAGGGTCGGGTGTACGTCCGAGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SAKHAAIPAEKS*TPRVGCTSEAV Trigger: GACAGCCTCGGACGTACACCCGACCCTGGGGGTCCAGCTCTTCTCAGCTGGAATAGCGGCGTGCTTGGCGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS TCA 72 bp | GGTGATCACGTCCGCCAAGCACGCCGCTATTCCAGCTaGGAAGAGCTGGACCCCCAGGGTCGGGTGTACGTC | + |
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Preference number: 6 (lower is better) Translates to: GDHVRQARRYSS*EELDPQGRVYV Trigger: GACGTACACCCGACCCTGGGGGTCCAGCTCTTCTCAGCTGGAATAGCGGCGTGCTTGGCGGACGTGATCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS CAA 90 bp | GAGGAAAAGGGCTCCAGCCCCGAAGGTGGAGGAAGTTCCTTTCCCTaGCTCTTCACGCCTGTCCGCCGGGCAGCAAACCCGATTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: EEKGSSPEGGGSSFP*LFTPVRRAANPISV Trigger: AACAGAAATCGGGTTTGCTGCCCGGCGGACAGGCGTGAAGAGCAAGGGAAAGGAACTTCCTCCACCTTCGGGGCTGGAGCCCTTTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS GCA 72 bp | CGTGTAGCGAGGTTTGATTCCGTGGAGATGGCTCTGTaGTTGAAGTCTGACTTTCACGACCTCTGTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RVARFDSVEMAL*LKSDFHDLCGL Trigger: CAACCCACAGAGGTCGTGAAAGTCAGACTTCAAGCACAGAGCCATCTCCACGGAATCAAACCTCGCTACACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS CAA 90 bp | CCAATGAATACTGCCACTCCTCCAGTCGTTAGACCAGCTAAAATCTaGCTTCCTAAACTAGGTGCTGTTTCTTTCCCTGCGGTGAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PMNTATPPVVRPAKI*LPKLGAVSFPAVRN Trigger: GTTCCTCACCGCAGGGAAAGAAACAGCACCTAGTTTAGGAAGCAAGATTTTAGCTGGTCTAACGACTGGAGGAGTGGCAGTATTCATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS GCA 72 bp | AGTCCCTTTCCAAAGACCCGTCAAGCCTTCGGTTGTTaGTATTATTCTGTACGCATTATAAGTCCCCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SPFPKTRQAFGC*YYSVRIISPRV Trigger: TACACGGGGACTTATAATGCGTACAGAATAATAGCAACAACCGAAGGCTTGACGGGTCTTTGGAAAGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS CCA 72 bp | CAAGAAGGAAGGTACCAACCCCTTGAAGAAAGCCGTTaGTCCTTCGTTAGTGAACACTTTCATTGCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: QEGRYQPLEESR*SFVSEHFHCTV Trigger: AACTGTGCAATGAAAGTGTTCACTAACGAAGGACCAACGGCTTTCTTCAAGGGGTTGGTACCTTCCTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS CAA 72 bp | GTTGGTCCTTCGTTAGTGAACACTTTCATTGCACAGTaGGGCACACTTTTGTACTGTCCTGGTGGAGAATTA | + |
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Preference number: 6 (lower is better) Translates to: VGPSLVNTFIAQ*GTLLYCPGGEL Trigger: TAATTCTCCACCAGGACAGTACAAAAGTGTGCCCAACTGTGCAATGAAAGTGTTCACTAACGAAGGACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS GCA 72 bp | TTTCTTGAAGCTGATTATGTGGCACAGTCCATAGTCTaGCTTGACTTTGACAGTTCTCGTTTCAGTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: FLEADYVAQSIV*LDFDSSRFSCS Trigger: TGAACAACTGAAACGAGAACTGTCAAAGTCAAGGCAGACTATGGACTGTGCCACATAATCAGCTTCAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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| CDS CAA 90 bp | GGTCCTTCGTTAGTGAACACTTTCATTGCACAGTTGGGCACACTTTaGTACTGTCCTGGTGGAGAATTAATAAATCTGGTTTTTACTACA | + |
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Preference number: 6 (lower is better) Translates to: GPSLVNTFIAQLGTL*YCPGGELINLVFTT Trigger: TGTAGTAAAAACCAGATTTATTAATTCTCCACCAGGACAGTACAAAAGTGTGCCCAACTGTGCAATGAAAGTGTTCACTAACGAAGGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262999.4 |
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