RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UCKL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198276

Ensembl transcript IDs: ENST00000354216.11, ENST00000358711.7, ENST00000369908.9, ENST00000430743.1, ENST00000483710.1, ENST00000492660.1, ENST00000632800.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTaGCATCGGGGACCGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGT +
Preference number: 1 (lower is better)
Translates to: AHWAANPCRPLPPRH*HRGPRLSQSSGRQS
Trigger: ACTTTGGCGACCGCTACTTTGGGACAGACGCGGTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR TCA 90 bp CTCGCGGAAATGCATAGGCCACTGAGTGCACGCCCATCTCTGCCATaGGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGT +
Preference number: 1 (lower is better)
Translates to: LAEMHRPLSARPSLP*AATAKRSCPQARRG
Trigger: ACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCACTCAGTGGCCTATGCATTTCCGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR TCA 90 bp CACCGCCGTGGTGATGATTCTCACTCGCGGAAATGCATAGGCCACTaGGTGCACGCCCATCTCTGCCATGAGCAGCGACAGCAAAAAGAT +
Preference number: 1 (lower is better)
Translates to: HRRGDDSHSRKCIGH*VHAHLCHEQRQQKD
Trigger: ATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCACTCAGTGGCCTATGCATTTCCGCGAGTGAGAATCATCACCACGGCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CCA 90 bp ACCCGTGTAGGCCACTTCCTCCTCGTCACTGCCATCGGGGACCGCGTCTGTCCCCGCGCACTGCCATCATaGCCGCCGCGCCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: TRVGHFLLVTAIGDRVCPRALPS*PPRPWT
Trigger: TGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCG...GGGACAGACGCGGTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CCA 90 bp GGTGGTGGGGACGGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTGAGGCAGGAGGAGGGTaGTGGGGACGGGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: GGGDGMAHWAANPCRPLPEAGGG*WGRDGS
Trigger: TGAGCCATCCCGTCCCCACCACCCTCCTCCTGCCTC...AGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCCGTCCCCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR TCA 90 bp GGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCGCTGGTTGGTCTGGATaGGGATGGTGCCGATGCGCA +
Preference number: 2 (lower is better)
Translates to: GMAHWAANPCRPLPPRHCAGWSG*GWCRCA
Trigger: TGCGCATCGGCACCATCCTCATCCAGACCAACCAGC...GCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR TCA 90 bp GGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCACACGGTGCAGTCCATaGGGATCACGTGGTCATCGC +
Preference number: 2 (lower is better)
Translates to: GMAHWAANPCRPLPPRHCTRCSP*GSRGHR
Trigger: GCGATGACCACGTGATCCTCATGGACTGCACCGTGT...GCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR TCA 90 bp GGTGGTGGGGACGGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCGCCCATCTCTGCCATaGGCAGCGACAGCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: GGGDGMAHWAANPCRPLPRPSLP*AATAKR
Trigger: TCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCG...AGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCCGTCCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR CAA 90 bp GAGTGCACGCCCATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTaGTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGCACTGCCATC +
Preference number: 2 (lower is better)
Translates to: ECTPISAMSSDSKKI*SSGTSWSRSTRTAI
Trigger: GATGGCAGTGCGCGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR GCA 90 bp GGGGACCGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATGTGCACGCCCATCTCTaGCATGAGCAGCGACAGCAA +
Preference number: 2 (lower is better)
Translates to: GDRVCPKVAVAKVPNAWDVHAHL*HEQRQQ
Trigger: TTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCAC...ATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR GCA 90 bp TCGCCAAAGTTCCCAATGCCTGGGATGATGCGGAAAAGGTCATTGACCCGCTTGCGATGCGCACGTCTTTaGACACAGCGCGCAGCGCGG +
Preference number: 2 (lower is better)
Translates to: SPKFPMPGMMRKRSLTRLRCARL*TQRAAR
Trigger: CCGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCG...CAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGGAACTTTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CCA 90 bp GGGGACCGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATTGTATTCAGCAGTCCTaGGTCAGGAGGCAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GDRVCPKVAVAKVPNAWDCIQQS*VRRQEE
Trigger: CTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACA...ATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCGGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR CAA 90 bp CGGTCGCCAAAGTTCCCAATGCCTGGGATGATGCGGAAAAGGTCATaGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTCGCGGA +
Preference number: 2 (lower is better)
Translates to: RSPKFPMPGMMRKRS*TRLSTAVVMILTRG
Trigger: TCCGCGAGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGGAACTTTGGCGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CCA 90 bp AGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGGTAAGCTGGTTGGTCTaGATGAGGATGGTGCCGATG +
Preference number: 2 (lower is better)
Translates to: SSDSKKILSSGTSWSRSTVSWLV*MRMVPM
Trigger: CATCGGCACCATCCTCATCCAGACCAACCAGCTTAC...CGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CCA 90 bp CAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGTCCATGAGGATCACGTaGTCATCGCTGATGTCCTTG +
Preference number: 2 (lower is better)
Translates to: QRQQKDLVLRHVVVQEHASMRIT*SSLMSL
Trigger: CAAGGACATCAGCGATGACCACGTGATCCTCATGGA...CGCGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGAGGCAGGAGGAGGGTaGTGGGGACGGGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: LKINIFVFSSPGSGGRRREAGGG*WGRDGS
Trigger: TGAGCCATCCCGTCCCCACCACCCTCCTCCTGCCTC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
3UTR-3UTR TCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTGCGGAAAAGGTCATTaGCCCGCTTGTCCACCGCCG +
Preference number: 2 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRCGKGH*PACPPP
Trigger: CGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR TCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGAAATGCATAGGCCACTaGGTGCACGCCCATCTCTGC +
Preference number: 2 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRKCIGH*VHAHLC
Trigger: GCAGAGATGGGCGTGCACTCAGTGGCCTATGCATTT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTGTATTCAGCAGTCCTaGGTCAGGAGGCAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRCIQQS*VRRQEE
Trigger: CTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
3UTR GCA 72 bp GTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGCACTaGCATCATGGCCGCCGCGCCCGTGGACACGGTGCA +
Preference number: 3 (lower is better)
Translates to: VLRHVVVQEHAH*HHGRRARGHGA
Trigger: TGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCGTGCTCCTGGACCACGACGTGCCTGAGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CAA 90 bp GGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTCCGATGCGCACGTCTTaGCACACAGCGCGCAGCGCG +
Preference number: 3 (lower is better)
Translates to: GRRARGHGAVHEDHVVIAPMRTS*HTARSA
Trigger: CGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGG...AGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR CCA 72 bp AGGCAGGAGGAGGGTGGTGGGGACGGGATGGCTCACTaGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGT +
Preference number: 3 (lower is better)
Translates to: RQEEGGGDGMAH*AANPCRPLPPR
Trigger: ACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCCGTCCCCACCACCCTCCTCCTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR GCA 72 bp GCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTaGCATCGGGGACCGCGTCTGTCCCAAAGTAGCGGT +
Preference number: 3 (lower is better)
Translates to: AANPCRPLPPRH*HRGPRLSQSSG
Trigger: ACCGCTACTTTGGGACAGACGCGGTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR TCA 72 bp GGTGATGATTCTCACTCGCGGAAATGCATAGGCCACTaGGTGCACGCCCATCTCTGCCATGAGCAGCGACAG +
Preference number: 3 (lower is better)
Translates to: GDDSHSRKCIGH*VHAHLCHEQRQ
Trigger: CTGTCGCTGCTCATGGCAGAGATGGGCGTGCACTCAGTGGCCTATGCATTTCCGCGAGTGAGAATCATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR TCA 72 bp ATGCATAGGCCACTGAGTGCACGCCCATCTCTGCCATaGGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: MHRPLSARPSLP*AATAKRSCPQA
Trigger: TGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCACTCAGTGGCCTATGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGAGGTCATTGACCCGCTaGTCCACCGCCGTGGTGATG +
Preference number: 3 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRRSLTR*STAVVM
Trigger: CATCACCACGGCGGTGGACAAGCGGGTCAATGACCT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTCGCGCACTGCCATCATaGCCGCCGCGCCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: GRRARGHGAVHEDHVVIARALPS*PPRPWT
Trigger: TGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCG...AGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTCTCAGCCTGCCGGCCTaGTGTGTCTCGGGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: GRRARGHGAVHEDHVVIALSLPA*CVSGRR
Trigger: CCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAG...AGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp CAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCCATCGGGGACCGCGTCGGGGAGAGCGCCCAGTaGCCACAGGTGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QLTRVGHFLLVTAIGDRVGESAQ*PQVAGA
Trigger: GGCTCCTGCCACCTGTGGGCACTGGGCGCTCTCCCC...GACGCGGTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GGGGACCGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATGGCAGCGGGTGGCACTaGTGTGCCGAGGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GDRVCPKVAVAKVPNAWDGSGWH*CAEASA
Trigger: TGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCC...ATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCGGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp GGTGGTGGGGACGGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCAGCAGGGGAGGCTCTaGCTTGCACTGGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GGGDGMAHWAANPCRPLPQQGRL*LALAGG
Trigger: ACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTG...AGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCCGTCCCCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp GGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTACACGGTGCAGTCCATaGGGATCACGTGGTCATCGC +
Preference number: 4 (lower is better)
Translates to: GRRARGHGAVHEDHVVIATRCSP*GSRGHR
Trigger: GCGATGACCACGTGATCCTCATGGACTGCACCGTGT...AGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp CAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGTGTGGGGCCAACAGTTaGGCGGGAGCACGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: QRQQKDLVLRHVVVQEHACGANS*AGARAR
Trigger: CCGGGCGCGTGCTCCCGCTCAACTGTTGGCCCCACA...CGCGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp TGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCCATCGGGGACCGTCTTCCCAGAGGCACTaGCGCCTCCCAAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: WAANPCRPLPPRHCHRGPSSQRH*RLPSRW
Trigger: CCATCGGCTTGGGAGGCGGCAGTGCCTCTGGGAAGA...CGGTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp ACGCGCACTGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGAGCTGGCTGTGCACGTaGTGCACAATCAGGTCGATG +
Preference number: 4 (lower is better)
Translates to: TRTAIMAAAPVDTVQSMRSWLCT*CTIRSM
Trigger: CATCGACCTGATTGTGCAGCACGTGCACAGCCAGCT...CCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp CCGGTAAGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACCAGGAGCACGCGCACTaGCATCATGGCCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PVSWLVWMRMVPMRTSLHQEHAH*HHGRRA
Trigger: GGCGCGGCGGCCATGATGGCAGTGCGCGTGCTCCTG...GTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCTTACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTTGTCTGCCAGGCGCATaGTGGGCTGGATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: GRRARGHGAVHEDHVVIACLPGA*WAGCTG
Trigger: ACCAGTACATCCAGCCCACCATGCGCCTGGCAGACA...AGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp TGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGTGTTGCCGCTCCCTCTaGGGACCACGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CHHGRRARGHGAVHEDHVCCRSL*GPRCLP
Trigger: TGGCAGACATCGTGGTCCCCAGAGGGAGCGGCAACA...CACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp TGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCTCCTTGTCCCTGTaGGGCCAACAGTTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CHHGRRARGHGAVHEDHVVSLSL*GQQLSG
Trigger: CCCGCTCAACTGTTGGCCCCACAGGGACAAGGAGAC...CACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp GGGCTCCCCGGTAAGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCAGAGCGCGTGCTCGATaGGCAGCCGCATCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GLPGKLVGLDEDGADAHVRARAR*AAASVS
Trigger: AGAGACTGATGCGGCTGCTCATCGAGCACGCGCTCT...GACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCTTACCGGGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp TGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCCATCGGGGACCGGCGGCCTGTTCCTGCTaGTGCTCAGTCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: WAANPCRPLPPRHCHRGPAACSC*CSVSTL
Trigger: CAAGGTGCTGACTGAGCAGCAGCAGGAACAGGCCGC...CGGTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp TGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGTGGCTGTGCACGTGCTaGACAATCAGGTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: CHHGRRARGHGAVHEDHVWLCTC*TIRSMA
Trigger: GGCCATCGACCTGATTGTGCAGCACGTGCACAGCCA...CACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp GGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACACAGCGCGCAGCGCAGGAAGGAGAGCGCGTaGTCGATGAGCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: GLDEDGADAHVFAHSAQRRKESA*SMSSRI
Trigger: GATGCGGCTGCTCATCGAGCACGCGCTCTCCTTCCT...GCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GATGGTGCCGATGCGCACGTCTTTGCACACAGCGCGCAGCGCGGGCTCCATGGTGCCCGGCGGTGTAGATaGTACGCTTGCTTGTACGCA +
Preference number: 4 (lower is better)
Translates to: DGADAHVFAHSAQRGLHGARRCR*YACLYA
Trigger: TGCGTACAAGCAAGCGTACCATCTACACCGCCGGGC...ACCATGGAGCCCGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGGCACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GCCCATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: AHLCHEQRQQKDLVLRHVVRGSG*HWCAEA
Trigger: GGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGAC...GACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCGTGGTGGGGACGGGATaGCTCACTGGGCAGCTAACC +
Preference number: 4 (lower is better)
Translates to: GMAHWAANPCRPLPPRHCVVGTG*LTGQLT
Trigger: GGTTAGCTGCCCAGTGAGCCATCCCGTCCCCACCAC...GCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp ACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCCATCGGGGACCAGCCCTCCTCCAGCTaGCTGTGCACGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: TGQLTRVGHFLLVTAIGDQPSSS*LCTCCT
Trigger: TGTGCAGCACGTGCACAGCCAGCTGGAGGAGGGCTG...GTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp ACGCGCACTGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGTCTTGGAGTAGAAGATaGACTCGTCGCGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: TRTAIMAAAPVDTVQSMRSWSRR*TRRDWS
Trigger: AGACCAGTCGCGACGAGTTCATCTTCTACTCCAAGA...CCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp TGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCCATCGGGGACCGTGTACGACGCAGTCCTaGAAGGGCAGGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: WAANPCRPLPPRHCHRGPCTTQS*KGRKES
Trigger: GCTCTCCTTCCTGCCCTTTCAGGACTGCGTCGTACA...CGGTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp CAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGCGATGGCCACCGTGTTaGCGCTCCCTCTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: QRQQKDLVLRHVVVQEHARWPPC*RSLWGP
Trigger: TGGTCCCCAGAGGGAGCGGCAACACGGTGGCCATCG...CGCGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp AGGAGGGTGGTGGGGACGGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTCATTCTGGCCACAGTaGTCTTCCCAGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RRVVGTGWLTGQLTRVGHSFWPQ*SSQRHC
Trigger: GCAGTGCCTCTGGGAAGACCACTGTGGCCAGAATGA...GTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCCGTCCCCACCACCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp ACCCGTGTAGGCCACTTCCTCCTCGTCACTGCCATCGGGGACCGCGTCTGTCCCGTGGGCTGGATGTACTaGTCGAAGGAGGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: TRVGHFLLVTAIGDRVCPVGWMY*SKEGLT
Trigger: TGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCAC...GGGACAGACGCGGTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp GGTGGTGGGGACGGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTTCCGGCTGTGCGTGGTaGAGTCATAAATGGGCACCT +
Preference number: 4 (lower is better)
Translates to: GGGDGMAHWAANPCRPLPSGCAW*SHKWAP
Trigger: AGGTGCCCATTTATGACTTCACCACGCACAGCCGGA...AGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCCGTCCCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp GGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCGTGCACGCCCATCTCTaGCATGAGCAGCGACAGCAA +
Preference number: 4 (lower is better)
Translates to: GMAHWAANPCRPLPPRHCVHAHL*HEQRQQ
Trigger: TTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCAC...GCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp AGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGGTCTCGGGCCGTAGGTaGCGACGTGGGCGAAGGATC +
Preference number: 4 (lower is better)
Translates to: SSDSKKILSSGTSWSRSTVSGRR*RRGRRI
Trigger: GATCCTTCGCCCACGTCGCCACCTACGGCCCGAGAC...CGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp CAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGCTGACTTGCACTGGCTaGTGGTCCGCTTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: QRQQKDLVLRHVVVQEHALTCTG*WSASGE
Trigger: CTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAG...CGCGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp CCTCAGGTAGTGGAGCTCGGGCTCCCCGGTAAGCTGGTTGGTCTGGATGAGGATCTGCCAGGCGCATGGTaGGCTGGATGTACTGGTCGA +
Preference number: 4 (lower is better)
Translates to: PQVVELGLPGKLVGLDEDLPGAW*AGCTGR
Trigger: TCGACCAGTACATCCAGCCCACCATGCGCCTGGCAG...ATCCTCATCCAGACCAACCAGCTTACCGGGGAGCCCGAGCTCCACTACCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTTCCATGAGGATCACGTaGTCATCGCTGATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GRRARGHGAVHEDHVVIASMRIT*SSLMSL
Trigger: CAAGGACATCAGCGATGACCACGTGATCCTCATGGA...AGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp ACGCGCACTGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGAAAGTTCCCAATGCCTaGGATGATGCGGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TRTAIMAAAPVDTVQSMRKVPNA*DDAEKV
Trigger: GACCTTTTCCGCATCATCCCAGGCATTGGGAACTTT...CCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp GACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTGATGTCCTTGGGCAGCGCTGGTTGGTCTGGATaGGGATGGTGCCGATGCGCA +
Preference number: 4 (lower is better)
Translates to: DTVQSMRITWSSLMSLGSAGWSG*GWCRCA
Trigger: TGCGCATCGGCACCATCCTCATCCAGACCAACCAGC...GCTGCCCAAGGACATCAGCGATGACCACGTGATCCTCATGGACTGCACCGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp CGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATGATGCGTGCGGAAAAGGTCATTaGCCCGCTTGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: RVCPKVAVAKVPNAWDDACGKGH*PACPPP
Trigger: CGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCA...CGCATCATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp CGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATGATGCGTCGCTTTTCTCAGCCTaGCGGCCTGGTGTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: RVCPKVAVAKVPNAWDDASLFSA*RPGVSR
Trigger: CCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGA...CGCATCATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp TGGGATGATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGTGGTGATGATCCAGGGACTCTGCATTaGTGCGGTCCTCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: WDDAEKVIDPLVHRRGDDPGTLH*CGPRTR
Trigger: CCGCGTGCGAGGACCGCAGCAATGCAGAGTCCCTGG...ATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp GGGCTCCCCGGTAAGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTGTAGATGGTACGCTTaGTTGTACGCAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLPGKLVGLDEDGADAHVCRWYA*LYAAGE
Trigger: CTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACA...GACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCTTACCGGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACACAGCGCGCAGCGCTGGCGAAGGCCTCTTTaGATTGCGTGCCGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GLDEDGADAHVFAHSAQRWRRPL*IACRVH
Trigger: ATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCA...GCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GCCCATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGCAGCGCGGGCTCCATaGTTTCACCGGCGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: AHLCHEQRQQKDLVLRHVAARAP*FHRRAE
Trigger: TTCTGCGCGCCGGTGAAACCATGGAGCCCGCGCTGC...GACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR CAA 72 bp CCCATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTaGTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGC +
Preference number: 4 (lower is better)
Translates to: PISAMSSDSKKI*SSGTSWSRSTR
Trigger: GCGCGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp GAGCTCGGGCTCCCCGGTAAGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGGGTCGAAGGAGGGCTTaGCAAACTTGTTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: ELGLPGKLVGLDEDGADAGRRRA*QTCCTA
Trigger: AGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACC...CGCATCGGCACCATCCTCATCCAGACCAACCAGCTTACCGGGGAGCCCGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp AGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACACAGCGTCACGTGGTCATCGCTaGTGTCCTTGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SWLVWMRMVPMRTSLHTASRGHR*CPWAAS
Trigger: TGAGGCTGCCCAAGGACATCAGCGATGACCACGTGA...CGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp GGGGACCGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATAAATGCATAGGCCACTaGGTGCACGCCCATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GDRVCPKVAVAKVPNAWDKCIGH*VHAHLC
Trigger: GCAGAGATGGGCGTGCACTCAGTGGCCTATGCATTT...ATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCGGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp TGGGATGATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGTGGTGATGATGGGGAGGCTCTGACTTaGACTGGCTGGTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: WDDAEKVIDPLVHRRGDDGEALT*TGWWSA
Trigger: AGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCC...ATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp GGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACACAGCGCGCAGCGCTTGACACTCTTCCCCTaGTTCAGCTTCTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLDEDGADAHVFAHSAQRLTLFP*FSFLRV
Trigger: CACCCTCAAGAAGCTGAAGCAGGGGAAGAGTGTCAA...GCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp GCCAAAGTTCCCAATGCCTGGGATGATGCGGAAAAGGTCATTGACCCGCTTGTCCCCGTACCTGCGGCGTaGTCTTCAGGACGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: AKVPNAWDDAEKVIDPLVPVPAA*SSGRSA
Trigger: CGCTGAGCGTCCTGAAGAGCACGCCGCAGGTACGGG...GACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGGAACTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp ATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGCGATGCGCACGTCTTTaGACACAGCGCGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: ISAMSSDSKKILSSGTSWRCARL*TQRAAR
Trigger: CCGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCG...CCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp ATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGCCCAGTGCCCACAGGTaGCAGGAGCCTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ISAMSSDSKKILSSGTSWPSAHR*QEPVQG
Trigger: TCCCTGGACAGGCTCCTGCCACCTGTGGGCACTGGG...CCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp TCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTCGCGGAAATGCAGGCTCTGACTTGCACTaGCTGGTGGTCCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SLTRLSTAVVMILTRGNAGSDLH*LVVRFR
Trigger: CCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCC...TGCATTTCCGCGAGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp GGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTGATGTCCTTGGGCAGAGGCGCATGGTGGGCTaGATGTACTGGTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GHGAVHEDHVVIADVLGQRRMVG*MYWSKE
Trigger: CTCCTTCGACCAGTACATCCAGCCCACCATGCGCCT...CTGCCCAAGGACATCAGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVVRGSG*HWCAEA
Trigger: GGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGAC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp ATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTGAGGCAGGAGGAGGGTaGTGGGGACGGGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: MRKRSLTRLSTAVVMILTEAGGG*WGRDGS
Trigger: TGAGCCATCCCGTCCCCACCACCCTCCTCCTGCCTC...AGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp ACTGAGTGCACGCCCATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTTGTCCCTTCCTCCTCGTCACTaGCATCGGGGACCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: TECTPISAMSSDSKKILSLPPRH*HRGPRL
Trigger: CAGACGCGGTCCCCGATGGCAGTGACGAGGAGGAAG...GGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCACTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCCGGGGGCGCAGCCATaGCGCTCGGAGGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVPGAQP*RSEASL
Trigger: CAAAGAGGCCTCCGAGCGCCATGGCTGCGCCCCCGG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354216.11
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGGCAGCGGGTGGCACTaGTGTGCCGAGGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVGSGWH*CAEASA
Trigger: TGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp ACTGAGTGCACGCCCATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTTGTCCTCCCCGCATAGCACTTaGCCGCATAGTCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TECTPISAMSSDSKKILSSPHST*PHSPAP
Trigger: AGGGGCAGGACTATGCGGGCAAGTGCTATGCGGGGA...GGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCACTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp ATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTCACCTGATGATGGTGTaGATGCCCCGTACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: MRKRSLTRLSTAVVMILTHLMMV*MPRTCG
Trigger: GCCGCAGGTACGGGGCATGCACACCATCATCAGGTG...AGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCTCAGCCTGCCGGCCTaGTGTGTCTCGGGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVLSLPA*CVSGRR
Trigger: CCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACACAGCGTGTAGAAGGAGTCCATaGACAGCAAGACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: SWLVWMRMVPMRTSLHTACRRSP*TARPPR
Trigger: CCTGGGTGGTCTTGCTGTCCATGGACTCCTTCTACA...CGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp ATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGGACGGGATGGCTCACTaGGCAGCTAACCCGTGTAGG +
Preference number: 4 (lower is better)
Translates to: ISAMSSDSKKILSSGTSWDGMAH*AANPCR
Trigger: CCTACACGGGTTAGCTGCCCAGTGAGCCATCCCGTC...CCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp AGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGTGTATTCAGCAGTCCTaGGTCAGGAGGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSDSKKILSSGTSWSRSTCIQQS*VRRQEE
Trigger: CTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACA...CGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
3UTR CAA 72 bp ATGCCTGGGATGATGCGGAAAAGGTCATTGACCCGCTaGTCCACCGCCGTGGTGATGATTCTCACTCGCGGA +
Preference number: 4 (lower is better)
Translates to: MPGMMRKRSLTR*STAVVMILTRG
Trigger: TCCGCGAGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp ACTGAGTGCACGCCCATCTCTGCCATGAGCAGCGACAGCAAAAAGATCTTGTCCCATCCAGGGCCTCGATaGTCATTCTGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: TECTPISAMSSDSKKILSHPGPR*SFWPQW
Trigger: CCACTGTGGCCAGAATGATCATCGAGGCCCTGGATG...GGACAAGATCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCACTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCCAGGGACTCTGCATTaGTGCGGTCCTCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVPGTLH*CGPRTR
Trigger: CCGCGTGCGAGGACCGCAGCAATGCAGAGTCCCTGG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGGGGAGAGCGCCCAGTaGCCACAGGTGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRGESAQ*PQVAGA
Trigger: GGCTCCTGCCACCTGTGGGCACTGGGCGCTCTCCCC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCCCGTACCTGCGGCGTaGTCTTCAGGACGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVPVPAA*SSGRSA
Trigger: CGCTGAGCGTCCTGAAGAGCACGCCGCAGGTACGGG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCGATGCGCACGTCTTTaGACACAGCGCGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVRCARL*TQRAAR
Trigger: CCGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCAGGAGCACGCGCACTaGCATCATGGCCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRQEHAH*HHGRRA
Trigger: GGCGCGGCGGCCATGATGGCAGTGCGCGTGCTCCTG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGTCTCGGGCCGTAGGTaGCGACGTGGGCGAAGGATC +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVVSGRR*RRGRRI
Trigger: GATCCTTCGCCCACGTCGCCACCTACGGCCCGAGAC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp GGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCTCAAAGGCATCTGGGTaGTCGAAGTTGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GMAHWAANPCRPLPPRHCSKASG*SKLKLL
Trigger: CAACAACTTCAACTTCGACCACCCAGATGCCTTTGA...GCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGCAGCGCGGGCTCCATaGTTTCACCGGCGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVAARAP*FHRRAE
Trigger: TTCTGCGCGCCGGTGAAACCATGGAGCCCGCGCTGC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCGCGCACTGCCATCATaGCCGCCGCGCCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRRALPS*PPRPWT
Trigger: TGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGAGGCAGGAGGAGGGTaGTGGGGACGGGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVEAGGG*WGRDGS
Trigger: TGAGCCATCCCGTCCCCACCACCCTCCTCCTGCCTC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCAGCAGGGGAGGCTCTaGCTTGCACTGGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVQQGRL*LALAGG
Trigger: ACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp ATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTCGCCCATCTCTGCCATaGGCAGCGACAGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: MRKRSLTRLSTAVVMILTRPSLP*AATAKR
Trigger: TCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCG...AGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp AGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACACAGCGAAGGCCTCTTTGGATTaGGTGCCGTGTTCATTGTAC +
Preference number: 4 (lower is better)
Translates to: SWLVWMRMVPMRTSLHTAKASLD*VPCSLY
Trigger: GTACAATGAACACGGCACGCAATCCAAAGAGGCCTT...CGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp TCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTCGCGGAAATGCAGTTGAAGTTGTTGTGTaGGGCCTGTTCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLTRLSTAVVMILTRGNAVEVVV*GLFLLL
Trigger: CAGCAGCAGGAACAGGCCGCACACAACAACTTCAAC...TGCATTTCCGCGAGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp GGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCACAAACTTGTTGTACTaGTTGATGACACCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GMAHWAANPCRPLPPRHCTNLLY*LMTPSM
Trigger: CATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGT...GCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCTTCCTCCTCGTCACTaGCATCGGGGACCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVLPPRH*HRGPRL
Trigger: CAGACGCGGTCCCCGATGGCAGTGACGAGGAGGAAG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGGCTCTGACTTGCACTaGCTGGTGGTCCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVGSDLH*LVVRFR
Trigger: CCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
3UTR CAA 72 bp AAGTTCCCAATGCCTGGGATGATGCGGAAAAGGTCATaGACCCGCTTGTCCACCGCCGTGGTGATGATTCTC +
Preference number: 4 (lower is better)
Translates to: KFPMPGMMRKRS*TRLSTAVVMIL
Trigger: GAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR TCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGCTGGTTGGTCTGGATaGGGATGGTGCCGATGCGCA +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVAGWSG*GWCRCA
Trigger: TGCGCATCGGCACCATCCTCATCCAGACCAACCAGC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTGCGGAAAAGGTCATTaGCCCGCTTGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVCGKGH*PACPPP
Trigger: CGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTCGCTTTTCTCAGCCTaGCGGCCTGGTGTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVSLFSA*RPGVSR
Trigger: CCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCCTGTCCAGGGACTCTaGATTGCTGCGGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVPVQGL*IAAVLA
Trigger: TGCGAGGACCGCAGCAATGCAGAGTCCCTGGACAGG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp GAGCTCGGGCTCCCCGGTAAGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGAAAGATGATGACGTTTaGACCATACAGTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ELGLPGKLVGLDEDGADAKDDDV*TIQCFP
Trigger: TGGAAAACACTGTATGGTGCAAACGTCATCATCTTT...CGCATCGGCACCATCCTCATCCAGACCAACCAGCTTACCGGGGAGCCCGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCGATGGCCACCGTGTTaGCGCTCCCTCTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRRWPPC*RSLWGP
Trigger: TGGTCCCCAGAGGGAGCGGCAACACGGTGGCCATCG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCCCAGTGCCCACAGGTaGCAGGAGCCTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRPSAHR*QEPVQG
Trigger: TCCCTGGACAGGCTCCTGCCACCTGTGGGCACTGGG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCTGCCAGGCGCATGGTaGGCTGGATGTACTGGTCGA +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVLPGAW*AGCTGR
Trigger: TCGACCAGTACATCCAGCCCACCATGCGCCTGGCAG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTGTTGCCGCTCCCTCTaGGGACCACGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVCCRSL*GPRCLP
Trigger: TGGCAGACATCGTGGTCCCCAGAGGGAGCGGCAACA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp GCCAAAGTTCCCAATGCCTGGGATGATGCGGAAAAGGTCATTGACCCGCTTGTCGTAAGCTGGTTGGTCTaGATGAGGATGGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: AKVPNAWDDAEKVIDPLVVSWLV*MRMVPM
Trigger: CATCGGCACCATCCTCATCCAGACCAACCAGCTTAC...GACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGGAACTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGACGGGATGGCTCACTaGGCAGCTAACCCGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVDGMAH*AANPCR
Trigger: CCTACACGGGTTAGCTGCCCAGTGAGCCATCCCGTC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCATCCAGGGCCTCGATaGTCATTCTGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVHPGPR*SFWPQW
Trigger: CCACTGTGGCCAGAATGATCATCGAGGCCCTGGATG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTGTACGACGCAGTCCTaGAAGGGCAGGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVCTTQS*KGRKES
Trigger: GCTCTCCTTCCTGCCCTTTCAGGACTGCGTCGTACA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGACACGGTGCAGTCCATaGGGATCACGTGGTCATCGC +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVTRCSP*GSRGHR
Trigger: GCGATGACCACGTGATCCTCATGGACTGCACCGTGT...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGGGGAGGCTCTGACTTaGACTGGCTGGTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRGEALT*TGWWSA
Trigger: AGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp ATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTCCTCTTTGGATTGCGTaGCGTGTTCATTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: MRKRSLTRLSTAVVMILTPLWIA*RVHCTR
Trigger: CCTGGTACAATGAACACGGCACGCAATCCAAAGAGG...AGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCTTCCCAGAGGCACTaGCGCCTCCCAAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSSQRH*RLPSRW
Trigger: CCATCGGCTTGGGAGGCGGCAGTGCCTCTGGGAAGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTGGCTGTGCACGTGCTaGACAATCAGGTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVWLCTC*TIRSMA
Trigger: GGCCATCGACCTGATTGTGCAGCACGTGCACAGCCA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGACTTGCACTGGCTGGTaGTCCGCTTCCGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRTCTGW*SASGES
Trigger: GCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCTGACTTGCACTGGCTaGTGGTCCGCTTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRLTCTG*WSASGE
Trigger: CTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCGCCTCCCAAGCCGATaGCGAAGGCCTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVRLPSR*RRPLWI
Trigger: AATCCAAAGAGGCCTTCGCCATCGGCTTGGGAGGCG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTGTCTGCCAGGCGCATaGTGGGCTGGATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVCLPGA*WAGCTG
Trigger: ACCAGTACATCCAGCCCACCATGCGCCTGGCAGACA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGTGGGGACGGGATaGCTCACTGGGCAGCTAACC +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRVVGTG*LTGQLT
Trigger: GGTTAGCTGCCCAGTGAGCCATCCCGTCCCCACCAC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCTGGGTGGTCGAAGTTaGAGTTGTTGTGTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVLGGRS*SCCVRP
Trigger: AGGCCGCACACAACAACTTCAACTTCGACCACCCAG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGAGAGCGCGTGCTCGATaGGCAGCCGCATCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRRARAR*AAASVS
Trigger: AGAGACTGATGCGGCTGCTCATCGAGCACGCGCTCT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGCGGCCTGTTCCTGCTaGTGCTCAGTCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRAACSC*CSVSTL
Trigger: CAAGGTGCTGACTGAGCAGCAGCAGGAACAGGCCGC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGAGCTGGCTGTGCACGTaGTGCACAATCAGGTCGATG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVSWLCT*CTIRSM
Trigger: CATCGACCTGATTGTGCAGCACGTGCACAGCCAGCT...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCCCTGATGATGGTGTaGATGCCCCGTACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSLMMV*MPRTCG
Trigger: GCCGCAGGTACGGGGCATGCACACCATCATCAGGGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354216.11
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGAGGAAGGAGAGCGCGTaGTCGATGAGCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRRKESA*SMSSRI
Trigger: GATGCGGCTGCTCATCGAGCACGCGCTCTCCTTCCT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCCCCGCATAGCACTTaGCCGCATAGTCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSPHST*PHSPAP
Trigger: AGGGGCAGGACTATGCGGGCAAGTGCTATGCGGGGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTCATTCTGGCCACAGTaGTCTTCCCAGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVSFWPQ*SSQRHC
Trigger: GCAGTGCCTCTGGGAAGACCACTGTGGCCAGAATGA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGTGGGCTGGATGTACTaGTCGAAGGAGGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVVGWMY*SKEGLT
Trigger: TGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCAC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTGTATTCAGCAGTCCTaGGTCAGGAGGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVCIQQS*VRRQEE
Trigger: CTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCACGTGGTCATCGCTaGTGTCCTTGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSRGHR*CPWAAS
Trigger: TGAGGCTGCCCAAGGACATCAGCGATGACCACGTGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCACGCCCATCTCTaGCATGAGCAGCGACAGCAA +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRVHAHL*HEQRQQ
Trigger: TTGCTGTCGCTGCTCATGGCAGAGATGGGCGTGCAC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGCCCGGCGGTGTAGATaGTACGCTTGCTTGTACGCA +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRARRCR*YACLYA
Trigger: TGCGTACAAGCAAGCGTACCATCTACACCGCCGGGC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCGCCTCCCAAGCCGATaGCGAAGGCCTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRRLPSR*RRPLWI
Trigger: AATCCAAAGAGGCCTTCGCCATCGGCTTGGGAGGCG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGAGGCGCATGGTGGGCTaGATGTACTGGTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRRRMVG*MYWSKE
Trigger: CTCCTTCGACCAGTACATCCAGCCCACCATGCGCCT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGGTAAGCTGGTTGGTCTaGATGAGGATGGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVVSWLV*MRMVPM
Trigger: CATCGGCACCATCCTCATCCAGACCAACCAGCTTAC...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCCGGCTGTGCGTGGTaGAGTCATAAATGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSGCAW*SHKWAP
Trigger: AGGTGCCCATTTATGACTTCACCACGCACAGCCGGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCGCCCATCTCTGCCATaGGCAGCGACAGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRRPSLP*AATAKR
Trigger: TCTTTTTGCTGTCGCTGCTCATGGCAGAGATGGGCG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTTGACACTCTTCCCCTaGTTCAGCTTCTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVLTLFP*FSFLRV
Trigger: CACCCTCAAGAAGCTGAAGCAGGGGAAGAGTGTCAA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTGTAGATGGTACGCTTaGTTGTACGCAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRCRWYA*LYAAGE
Trigger: CTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTTGAAGTTGTTGTGTaGGGCCTGTTCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRVEVVV*GLFLLL
Trigger: CAGCAGCAGGAACAGGCCGCACACAACAACTTCAAC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTGGCGAAGGCCTCTTTaGATTGCGTGCCGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRWRRPL*IACRVH
Trigger: ATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTGTAGAAGGAGTCCATaGACAGCAAGACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRCRRSP*TARPPR
Trigger: CCTGGGTGGTCTTGCTGTCCATGGACTCCTTCTACA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGGTCGAAGGAGGGCTTaGCAAACTTGTTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRGRRRA*QTCCTA
Trigger: AGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR TCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCTTGGAGTAGAAGATaGACTCGTCGCGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSWSRR*TRRDWS
Trigger: AGACCAGTCGCGACGAGTTCATCTTCTACTCCAAGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCCTCTTTGGATTGCGTaGCGTGTTCATTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRPLWIA*RVHCTR
Trigger: CCTGGTACAATGAACACGGCACGCAATCCAAAGAGG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTCAAAGGCATCTGGGTaGTCGAAGTTGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVSKASG*SKLKLL
Trigger: CAACAACTTCAACTTCGACCACCCAGATGCCTTTGA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCCATGAGGATCACGTaGTCATCGCTGATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSMRIT*SSLMSL
Trigger: CAAGGACATCAGCGATGACCACGTGATCCTCATGGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGAAGGCCTCTTTGGATTaGGTGCCGTGTTCATTGTAC +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRKASLD*VPCSLY
Trigger: GTACAATGAACACGGCACGCAATCCAAAGAGGCCTT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGAAAGTTCCCAATGCCTaGGATGATGCGGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRKVPNA*DDAEKV
Trigger: GACCTTTTCCGCATCATCCCAGGCATTGGGAACTTT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGACAAACTTGTTGTACTaGTTGATGACACCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRTNLLY*LMTPSM
Trigger: CATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR GCA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGAAAGATGATGACGTTTaGACCATACAGTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRKDDDV*TIQCFP
Trigger: TGGAAAACACTGTATGGTGCAAACGTCATCATCTTT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS CCA 90 bp CTCGCTTTTCTCAGCCTGCCGGCCTGGTGTGTCTCGGGCCGTAGGTaGCGACGTGGGCGAAGGATCAGCGTCCGCGCGGGCCGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: LAFLSLPAWCVSGRR*RRGRRISVRAGRGR
Trigger: GCGCCCCCGGCCCGCGCGGACGCTGATCCTTCGCCCACGTCGCCACCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS CCA 90 bp GGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTGGCACTaGTGTGCCGAGGCCAGCGCAGCCCTCCTCCAGCTGGCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: GVLFRTLSVRGSGWH*CAEASAALLQLAVH
Trigger: GTGCACAGCCAGCTGGAGGAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS CCA 90 bp ACCTGCGGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCCAGCGCAGCCCTCCTCCAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: TCGVLFRTLSVRGSG*HWCAEASAALLQLA
Trigger: AGCCAGCTGGAGGAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCACGCCGCAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS CCA 90 bp GGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTGGCACTaGTGTGCCGAGGCCAGCGCAGCCCTGACGCTGAGTTCACGCTCC +
Preference number: 5 (lower is better)
Translates to: GVLFRTLSVRGSGWH*CAEASAALTLSSRS
Trigger: GGAGCGTGAACTCAGCGTCAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000369908.9
CDS CCA 90 bp ACCTGCGGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCCAGCGCAGCCCTGGGGACAAACCGA +
Preference number: 5 (lower is better)
Translates to: TCGVLFRTLSVRGSG*HWCAEASAALGTNR
Trigger: TCGGTTTGTCCCCAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCACGCCGCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430743.1
CDS GCA 90 bp GCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTGGCACTGGTGTaGCGAGGCCAGCGCAGCCCTGACGCTGAGTTCACGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: ALQDAQRPGQRVALV*RGQRSPDAEFTLLQ
Trigger: CTGGAGGAGCGTGAACTCAGCGTCAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000369908.9
CDS CCA 90 bp ACCTGCGGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCCAGCGCAGCCCTGACGCTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: TCGVLFRTLSVRGSG*HWCAEASAALTLSS
Trigger: TGAACTCAGCGTCAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCACGCCGCAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000369908.9
CDS GCA 90 bp GTGCCGAGGCCAGCGCAGCCCTCCTCCAGCTGGCTGTGCACGTGCTaGACAATCAGGTCGATGGCCACCGTGTTGCCGCTCCCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: VPRPAQPSSSWLCTC*TIRSMATVLPLPLG
Trigger: CCCCAGAGGGAGCGGCAACACGGTGGCCATCGACCTGATTGTGCAGCACGTGCACAGCCAGCTGGAGGAGGGCTGCGCTGGCCTCGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS CCA 90 bp GCTGCGGTCCTCGCACGCGGTCTCGCTTTTCTCAGCCTGCCGGCCTaGTGTGTCTCGGGCCGTAGGTGGCGACGTGGGCGAAGGATCAGC +
Preference number: 5 (lower is better)
Translates to: AAVLARGLAFLSLPA*CVSGRRWRRGRRIS
Trigger: GCTGATCCTTCGCCCACGTCGCCACCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGAGACCGCGTGCGAGGACCGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS CCA 90 bp CTGGCTGGTGGTCCGCTTCCGGGGAGAGCGCCCAGTGCCCACAGGTaGCAGGAGCCTGTCCAGGGACTCTGCATTGCTGCGGTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: LAGGPLPGRAPSAHR*QEPVQGLCIAAVLA
Trigger: TGCGAGGACCGCAGCAATGCAGAGTCCCTGGACAGGCTCCTGCCACCTGTGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS CCA 90 bp CTCCGGCCACCTGAACTGGCCCTTCCATGGGCAGGACCACTCCTGTaGGCAGCACAGTGGGTGCAGAGCCGGGTGGCTGGGGTGAGACCC +
Preference number: 5 (lower is better)
Translates to: LRPPELALPWAGPLL*AAQWVQSRVAGVRP
Trigger: GGGTCTCACCCCAGCCACCCGGCTCTGCACCCACTGTGCTGCCCACAGGAGTGGTCCTGCCCATGGAAGGGCCAGTTCAGGTGGCCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369908.9
CDS CCA 90 bp ACCTGCGGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCCAGCGCAGCCATATCCCAACGTAGC +
Preference number: 5 (lower is better)
Translates to: TCGVLFRTLSVRGSG*HWCAEASAAISQRS
Trigger: GCTACGTTGGGATATGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCACGCCGCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632800.1
CDS CCA 90 bp CTGGCTGGTGGTCCGCTTCCGGGGAGAGCGCCCAGTGCCCACAGGTaGCAGGAGCCTGTCCAGGGACTCTGCATTGCTGCTGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LAGGPLPGRAPSAHR*QEPVQGLCIAAAFC
Trigger: GCAGAAGGCAGCAGCAATGCAGAGTCCCTGGACAGGCTCCTGCCACCTGTGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369908.9
CDS CCA 90 bp GGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTGGCACTaGTGTGCCGAGGCCAGCGCAGCCATATCCCAACGTAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GVLFRTLSVRGSGWH*CAEASAAISQRSFL
Trigger: GAGGAAGCTACGTTGGGATATGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632800.1
CDS GCA 90 bp TCTGCATTGCTGCGGTCCTCGCACGCGGTCTCGCTTTTCTCAGCCTaGCGGCCTGGTGTGTCTCGGGCCGTAGGTGGCGACGTGGGCGAA +
Preference number: 5 (lower is better)
Translates to: SALLRSSHAVSLFSA*RPGVSRAVGGDVGE
Trigger: TTCGCCCACGTCGCCACCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGAGACCGCGTGCGAGGACCGCAGCAATGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS GCA 90 bp CTGACTTGCACTGGCTGGTGGTCCGCTTCCGGGGAGAGCGCCCAGTaGCCACAGGTGGCAGGAGCCTGTCCAGGGACTCTGCATTGCTGC +
Preference number: 5 (lower is better)
Translates to: LTCTGWWSASGESAQ*PQVAGACPGTLHCC
Trigger: GCAGCAATGCAGAGTCCCTGGACAGGCTCCTGCCACCTGTGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
CDS GCA 90 bp CGACTGGTCTCCTTGTCCCTGATGATGGTGTGCATGCCCCGTACCTaGGGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: RLVSLSLMMVCMPRT*GVLFRTLSVRGSGW
Trigger: CCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCACGCCGCAGGTACGGGGCATGCACACCATCATCAGGGACAAGGAGACCAGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000369908.9
ENST00000430743.1
ENST00000632800.1
CDS CCA 90 bp GCTTGCTTGTACGCAGCAGGGGAGGCTCTGACTTGCACTGGCTGGTaGTCCGCTTCCGGGGAGAGCGCCCAGTGCCCACAGGTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: ACLYAAGEALTCTGW*SASGESAQCPQVAG
Trigger: TCCTGCCACCTGTGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 90 bp CTGGCTGGTGGTCCGCTTCCGGGGAGAGCGCCCAGTGCCCACAGGTaGCAGGAGCCTGTCCAGGGACTCTGCATTGCTGATGGGGAGCAA +
Preference number: 5 (lower is better)
Translates to: LAGGPLPGRAPSAHR*QEPVQGLCIADGEQ
Trigger: TTGCTCCCCATCAGCAATGCAGAGTCCCTGGACAGGCTCCTGCCACCTGTGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS GCA 90 bp CACTGCCGCCTCCCAAGCCGATGGCGAAGGCCTCTTTGGATTGCGTaGCGTGTTCATTGTACCAGGGCGGCCGCCCGGCGGTGTAGATGG +
Preference number: 5 (lower is better)
Translates to: HCRLPSRWRRPLWIA*RVHCTRAAARRCRW
Trigger: CCATCTACACCGCCGGGCGGCCGCCCTGGTACAATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCATCGGCTTGGGAGGCGGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 90 bp GAGAAAAGCAAGCGGTCCTCGCACGCGGTCTCGCTTTTCTCAGCCTaGCGGCCTGGTGTGTCTCGGGCCGTAGGTGGCGACGTGGGCGAA +
Preference number: 5 (lower is better)
Translates to: EKSKRSSHAVSLFSA*RPGVSRAVGGDVGE
Trigger: TTCGCCCACGTCGCCACCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGAGACCGCGTGCGAGGACCGCTTGCTTTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS CCA 90 bp TACGCTTGCTTGTACGCAGCAGGGGAGGCTCTGACTTGCACTGGCTaGTGGTCCGCTTCCGGGGAGAGCGCCCAGTGCCCACAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: YACLYAAGEALTCTG*WSASGESAQCPQVA
Trigger: TGCCACCTGTGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 90 bp CCCCTCCCAGTGCGGGACCCCTCCTGCGCTAAGAGGAAGCAGAAGTaGGCCGGGCACAGGGCGGGCTCACACGTGCTGATAGGTGTCATA +
Preference number: 5 (lower is better)
Translates to: PLPVRDPSCAKRKQK*AGHRAGSHVLIGVI
Trigger: TATGACACCTATCAGCACGTGTGAGCCCGCCCTGTGCCCGGCCCACTTCTGCTTCCTCTTAGCGCAGGAGGGGTCCCGCACTGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430743.1
CDS CCA 90 bp CAGCACGAGGTGCAGAGCGGGCCTGACTTCTGCCTGGGGCTGAGCTaGGGGGAGACGTCGCCCTACCTGAGCTGTCAGGCAAAGGCGAAA +
Preference number: 5 (lower is better)
Translates to: QHEVQSGPDFCLGLS*GETSPYLSCQAKAK
Trigger: TTTCGCCTTTGCCTGACAGCTCAGGTAGGGCGACGTCTCCCCCCAGCTCAGCCCCAGGCAGAAGTCAGGCCCGCTCTGCACCTCGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430743.1
CDS TCA 90 bp GGCGGTGTAGATGGTACGCTTGCTTGTACGCAGCAGGGGAGGCTCTaGCTTGCACTGGCTGGTGGTCCGCTTCCGGGGAGAGCGCCCAGT +
Preference number: 5 (lower is better)
Translates to: GGVDGTLACTQQGRL*LALAGGPLPGRAPS
Trigger: ACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 90 bp ATGGTACGCTTGCTTGTACGCAGCAGGGGAGGCTCTGACTTGCACTaGCTGGTGGTCCGCTTCCGGGGAGAGCGCCCAGTGCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: MVRLLVRSRGGSDLH*LVVRFRGERPVPTG
Trigger: ACCTGTGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS-3UTR CAA 90 bp GGGGACCGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATTCGATGGCCACCGTGTaGCCGCTCCCTCTGGGGACC +
Preference number: 5 (lower is better)
Translates to: GDRVCPKVAVAKVPNAWDSMATV*PLPLGT
Trigger: GGTCCCCAGAGGGAGCGGCAACACGGTGGCCATCGA...ATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS GCA 90 bp TGTAGATGGTACGCTTGCTTGTACGCAGCAGGGGAGGCTCTGACTTaGACTGGCTGGTGGTCCGCTTCCGGGGAGAGCGCCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: CRWYACLYAAGEALT*TGWWSASGESAQCP
Trigger: TGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS GCA 90 bp GTTCATTGTACCAGGGCGGCCGCCCGGCGGTGTAGATGGTACGCTTaGTTGTACGCAGCAGGGGAGGCTCTGACTTGCACTGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VHCTRAAARRCRWYA*LYAAGEALTCTGWW
Trigger: CCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACACCGCCGGGCGGCCGCCCTGGTACAATGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 90 bp GCGTGCCGTGTTCATTGTACCAGGGCGGCCGCCCGGCGGTGTAGATaGTACGCTTGCTTGTACGCAGCAGGGGAGGCTCTGACTTGCACT +
Preference number: 5 (lower is better)
Translates to: ACRVHCTRAAARRCR*YACLYAAGEALTCT
Trigger: AGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACACCGCCGGGCGGCCGCCCTGGTACAATGAACACGGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 90 bp TGCCCTCATGTGCGGCTGAAGGGCCCGGGCAGCCTCACCAATGCCTaGGATGATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGT +
Preference number: 5 (lower is better)
Translates to: CPHVRLKGPGSLTNA*DDAEKVIDPLVHRR
Trigger: ACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGTGAGGCTGCCCGGGCCCTTCAGCCGCACATGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632800.1
CDS-3UTR CAA 90 bp CGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATGATGCGCCGATGCGCACGTCTTaGCACACAGCGCGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: RVCPKVAVAKVPNAWDDAPMRTS*HTARSA
Trigger: CGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGG...CGCATCATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp GGGCTCCCCGGTAAGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCAGGTCATTGACCCGCTaGTCCACCGCCGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: GLPGKLVGLDEDGADAHVRSLTR*STAVVM
Trigger: CATCACCACGGCGGTGGACAAGCGGGTCAATGACCT...GACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCTTACCGGGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS GCA 90 bp GGGTGGTCGAAGTTGAAGTTGTTGTGTGCGGCCTGTTCCTGCTGCTaGTCAGTCAGCACCTGGTGGGGGAGGCTGTGGAGCAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GWSKLKLLCAACSCC*SVSTWWGRLWSSCG
Trigger: CCCACAGCTGCTCCACAGCCTCCCCCACCAGGTGCTGACTGAGCAGCAGCAGGAACAGGCCGCACACAACAACTTCAACTTCGACCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492660.1
CDS GCA 90 bp GAGGGAAAGCTCCGCAAACGGCAGGACCGCCTCTTTGTAGCTTCCTaGAGCGGCACAGTCTGTCCACCGCGCTCCGGAGTTCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: EGKLRKRQDRLFVAS*SGTVCPPRSGVPQE
Trigger: TTCCTGTGGAACTCCGGAGCGCGGTGGACAGACTGTGCCGCTGCAGGAAGCTACAAAGAGGCGGTCCTGCCGTTTGCGGAGCTTTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS-3UTR CAA 90 bp CCGGTAAGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACTCCAGGGACTCTGCATaGCTGCGGTCCTCGCACGCG +
Preference number: 5 (lower is better)
Translates to: PVSWLVWMRMVPMRTSLHSRDSA*LRSSHA
Trigger: CGCGTGCGAGGACCGCAGCAATGCAGAGTCCCTGGA...GTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCTTACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp ACGCGCACTGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGGAAGGCCTCTTTGGATaGCGTGCCGTGTTCATTGTA +
Preference number: 5 (lower is better)
Translates to: TRTAIMAAAPVDTVQSMREGLFG*RAVFIV
Trigger: TACAATGAACACGGCACGCAATCCAAAGAGGCCTTC...CCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp GGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTTCGAAGTTGAAGTTGTaGTGTGCGGCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: GRRARGHGAVHEDHVVIASKLKL*CAACSC
Trigger: GCAGGAACAGGCCGCACACAACAACTTCAACTTCGA...AGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS GCA 90 bp GCATCTGGGTGGTCGAAGTTGAAGTTGTTGTGTGCGGCCTGTTCCTaGTGCTGCTCAGTCAGCACCTGGTGGGGGAGGCTGTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: ASGWSKLKLLCAACS*CCSVSTWWGRLWSS
Trigger: GCTGCTCCACAGCCTCCCCCACCAGGTGCTGACTGAGCAGCAGCAGGAACAGGCCGCACACAACAACTTCAACTTCGACCACCCAGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492660.1
CDS-3UTR CAA 90 bp CAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGTCGCGACTGGTCTCCTaGTCCCTGTGGGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: QRQQKDLVLRHVVVQEHASRLVS*SLWGQQ
Trigger: CTGTTGGCCCCACAGGGACAAGGAGACCAGTCGCGA...CGCGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS GCA 90 bp TCTGGGTGGTCGAAGTTGAAGTTGTTGTGTGCGGCCTGTTCCTGCTaGTGCTCAGTCAGCACCTGGTGGGGGAGGCTGTGGAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SGWSKLKLLCAACSC*CSVSTWWGRLWSSC
Trigger: ACAGCTGCTCCACAGCCTCCCCCACCAGGTGCTGACTGAGCAGCAGCAGGAACAGGCCGCACACAACAACTTCAACTTCGACCACCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492660.1
CDS CCA 90 bp CCGCTCCCTCTGGGGACCACGATGTCTGCCAGGCGCATGGTGGGCTaGATGTACTGGTCGAAGGAGGGCTTGACAAACTTGTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: PLPLGTTMSARRMVG*MYWSKEGLTNLLYC
Trigger: GCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCACCATGCGCCTGGCAGACATCGTGGTCCCCAGAGGGAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 90 bp TCCACCGCGCTCCGGAGTTCCACAGGAAATGGAACGCTCCACAGATaGCAGTTACGCCCGAAAACGACACAGAACACAGGTGCGGACAGG +
Preference number: 5 (lower is better)
Translates to: STALRSSTGNGTLHR*QLRPKTTQNTGADR
Trigger: CCTGTCCGCACCTGTGTTCTGTGTCGTTTTCGGGCGTAACTGGCATCTGTGGAGCGTTCCATTTCCTGTGGAACTCCGGAGCGCGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS CCA 90 bp GCAGCGGCACAGTCTGTCCACCGCGCTCCGGAGTTCCACAGGAAATaGAACGCTCCACAGATGCCAGTTACGCCCGAAAACGACACAGAA +
Preference number: 5 (lower is better)
Translates to: AAAQSVHRAPEFHRK*NAPQMPVTPENDTE
Trigger: TTCTGTGTCGTTTTCGGGCGTAACTGGCATCTGTGGAGCGTTCCATTTCCTGTGGAACTCCGGAGCGCGGTGGACAGACTGTGCCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS-3UTR CAA 90 bp GGGATGGCTCACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCGACAGCAAAAAGATCTaGTCCTCAGGCACGTCGTGG +
Preference number: 5 (lower is better)
Translates to: GMAHWAANPCRPLPPRHCDSKKI*SSGTSW
Trigger: CCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTC...GCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGTGAGCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp GGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTGATGTCCTTGGGCAGATGCGGAAAAGGTCATaGACCCGCTTGTCCACCGCC +
Preference number: 5 (lower is better)
Translates to: GHGAVHEDHVVIADVLGQMRKRS*TRLSTA
Trigger: GGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCAT...CTGCCCAAGGACATCAGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS GCA 90 bp GGCTGGATGTACTGGTCGAAGGAGGGCTTGACAAACTTGTTGTACTaGTTGATGACACCCTCGATGTCCCGGCCGCGCTCACTGATGTCC +
Preference number: 5 (lower is better)
Translates to: GWMYWSKEGLTNLLY*LMTPSMSRPRSLMS
Trigger: GGACATCAGTGAGCGCGGCCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 90 bp GCTCCACAGATGCCAGTTACGCCCGAAAACGACACAGAACACAGGTaGGGACAGGGAACGGCATCCTCAGAGCATGGTCAGGGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: APQMPVTPENDTEHR*GQGTASSEHGQGRK
Trigger: TTTTCTCCCCTGACCATGCTCTGAGGATGCCGTTCCCTGTCCGCACCTGTGTTCTGTGTCGTTTTCGGGCGTAACTGGCATCTGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS-3UTR CAA 90 bp TCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTCGCGGAAATGCAAGATGGTACGCTTGCTaGTACGCAGCAGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SLTRLSTAVVMILTRGNARWYAC*YAAGEA
Trigger: AGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCT...TGCATTTCCGCGAGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp AGCAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGATGGCGAAGGCCTCTTaGGATTGCGTGCCGTGTTCA +
Preference number: 5 (lower is better)
Translates to: SSDSKKILSSGTSWSRSTMAKAS*DCVPCS
Trigger: TGAACACGGCACGCAATCCAAAGAGGCCTTCGCCAT...CGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp CAGCGACAGCAAAAAGATCTTGTCCTCAGGCACGTCGTGGTCCAGGAGCACGCGCCCTGCTTCAGCTTCTaGAGGGTGGAAATGATGAGG +
Preference number: 5 (lower is better)
Translates to: QRQQKDLVLRHVVVQEHAPCFSF*RVEMMR
Trigger: CCTCATCATTTCCACCCTCAAGAAGCTGAAGCAGGG...CGCGTGCTCCTGGACCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp ACTGGGCAGCTAACCCGTGTAGGCCACTTCCTCCTCGTCACTGCCATCGGGGACGGCTTGACAAACTTGTaGTACTGCTTGATGACACCC +
Preference number: 5 (lower is better)
Translates to: TGQLTRVGHFLLVTAIGDGLTNL*YCLMTP
Trigger: GGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCC...GTCCCCGATGGCAGTGACGAGGAGGAAGTGGCCTACACGGGTTAGCTGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS CCA 90 bp CTGGGGACCACGATGTCTGCCAGGCGCATGGTGGGCTGGATGTACTaGTCGAAGGAGGGCTTGACAAACTTGTTGTACTGCTTGATGACA +
Preference number: 5 (lower is better)
Translates to: LGTTMSARRMVGWMY*SKEGLTNLLYCLMT
Trigger: TGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCACCATGCGCCTGGCAGACATCGTGGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS-3UTR CAA 90 bp TGGGATGATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTGGGTGGTCGAAGTaGAAGTTGTTGTGTGCGGCC +
Preference number: 5 (lower is better)
Translates to: WDDAEKVIDPLVHRRGDDSGWSK*KLLCAA
Trigger: GGCCGCACACAACAACTTCAACTTCGACCACCCAGA...ATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTGCGTGCCGTGTTCATaGTACCAGGGCGGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRCVPCS*YQGGRP
Trigger: CGGGCGGCCGCCCTGGTACAATGAACACGGCACGCA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp CGCGTCTGTCCCAAAGTAGCGGTCGCCAAAGTTCCCAATGCCTGGGATGATGCGAACTTGTTGTACTGCTaGATGACACCCTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: RVCPKVAVAKVPNAWDDANLLYC*MTPSMS
Trigger: GGACATCGAGGGTGTCATCAAGCAGTACAACAAGTT...CGCATCATCCCAGGCATTGGGAACTTTGGCGACCGCTACTTTGGGACAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCGATGGCCACCGTGTaGCCGCTCCCTCTGGGGACC +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSMATV*PLPLGT
Trigger: GGTCCCCAGAGGGAGCGGCAACACGGTGGCCATCGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGCCGATGCGCACGTCTTaGCACACAGCGCGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRPMRTS*HTARSA
Trigger: CGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGG...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS GCA 90 bp GTCGAAGTCAAAGGCATCTGGGTGGTCGAAGTTGAAGTTGTTGTGTaGGGCCTGTTCCTGCTGCTGCTCAGTCAGCACCTTGTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: VEVKGIWVVEVEVVV*GLFLLLLSQHLVEG
Trigger: TCCTTCTACAAGGTGCTGACTGAGCAGCAGCAGGAACAGGCCGCACACAACAACTTCAACTTCGACCACCCAGATGCCTTTGACTTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTCCAGGGACTCTGCATaGCTGCGGTCCTCGCACGCG +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRSRDSA*LRSSHA
Trigger: CGCGTGCGAGGACCGCAGCAATGCAGAGTCCCTGGA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp ATGCGGAAAAGGTCATTGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTTGGTCGAAGTTGAAGTaGTTGTGTGCGGCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: MRKRSLTRLSTAVVMILTWSKLK*LCAACS
Trigger: GGAACAGGCCGCACACAACAACTTCAACTTCGACCA...AGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp AGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTTGCACACAGCGGAGGGCTTGACAAACTaGTTGTACTGCTTGATGACA +
Preference number: 5 (lower is better)
Translates to: SWLVWMRMVPMRTSLHTAEGLTN*LYCLMT
Trigger: TGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTC...CGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGAGGTCATTGACCCGCTaGTCCACCGCCGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVRSLTR*STAVVM
Trigger: CATCACCACGGCGGTGGACAAGCGGGTCAATGACCT...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS CCA 90 bp TTCTTGAGGGTGGAAATGATGAGGTCGAAGTCAAAGGCATCTGGGTaGTCGAAGTTGAAGTTGTTGTGTGCGGCCTGTTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FLRVEMMRSKSKASG*SKLKLLCAACSCCC
Trigger: GCAGCAGCAGGAACAGGCCGCACACAACAACTTCAACTTCGACCACCCAGATGCCTTTGACTTCGACCTCATCATTTCCACCCTCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000492660.1
ENST00000632800.1
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGAGATGGTACGCTTGCTaGTACGCAGCAGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVRWYAC*YAAGEA
Trigger: AGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCT...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTCGCGACTGGTCTCCTaGTCCCTGATGATGGTGTGC +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVSRLVS*SLMMVC
Trigger: GCACACCATCATCAGGGACAAGGAGACCAGTCGCGA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354216.11
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGATGCGGAAAAGGTCATaGACCCGCTTGTCCACCGCC +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVMRKRS*TRLSTA
Trigger: GGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCAT...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTCTGGGTGGTCGAAGTaGAAGTTGTTGTGTGCGGCC +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVSGWSK*KLLCAA
Trigger: GGCCGCACACAACAACTTCAACTTCGACCACCCAGA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTCGAAGTTGAAGTTGTaGTGTGCGGCCTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVSKLKL*CAACSC
Trigger: GCAGGAACAGGCCGCACACAACAACTTCAACTTCGA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTGGTCGAAGTTGAAGTaGTTGTGTGCGGCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVWSKLK*LCAACS
Trigger: GGAACAGGCCGCACACAACAACTTCAACTTCGACCA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGCCCTGCTTCAGCTTCTaGAGGGTGGAAATGATGAGG +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVPCFSF*RVEMMR
Trigger: CCTCATCATTTCCACCCTCAAGAAGCTGAAGCAGGG...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGATGGCGAAGGCCTCTTaGGATTGCGTGCCGTGTTCA +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRMAKAS*DCVPCS
Trigger: TGAACACGGCACGCAATCCAAAGAGGCCTTCGCCAT...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGTGGTCGAAGGAGGGCTaGACAAACTTGTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVWSKEG*TNLLYC
Trigger: GCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCA...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp AAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGTGAACTTGTTGTACTGCTaGATGACACCCTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: KINIFVFSSPGSGGRRRVNLLYC*MTPSMS
Trigger: GGACATCGAGGGTGTCATCAAGCAGTACAACAAGTT...CACCCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGACAGCAAAAAGATCTaGTCCTCAGGCACGTCGTGG +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRDSKKI*SSGTSW
Trigger: CCACGACGTGCCTGAGGACAAGATCTTTTTGCTGTC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGAAGGCCTCTTTGGATaGCGTGCCGTGTTCATTGTA +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRREGLFG*RAVFIV
Trigger: TACAATGAACACGGCACGCAATCCAAAGAGGCCTTC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGTGGTCGAAGGAGGGCTaGACAAACTTGTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRWSKEG*TNLLYC
Trigger: GCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCA...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGGCTTGACAAACTTGTaGTACTGCTTGATGACACCC +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRRGLTNL*YCLMTP
Trigger: GGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS-3UTR CAA 90 bp TTAAAAATTAACATCTTTGTATTCAGCAGTCCTGGGTCAGGAGGCAGGAGGAGGGAGGGCTTGACAAACTaGTTGTACTGCTTGATGACA +
Preference number: 5 (lower is better)
Translates to: LKINIFVFSSPGSGGRRREGLTN*LYCLMT
Trigger: TGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTC...CCTCCTCCTGCCTCCTGACCCAGGACTGCTGAATACAAAGATGTTAATTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS CCA 72 bp CTCAGCCTGCCGGCCTGGTGTGTCTCGGGCCGTAGGTaGCGACGTGGGCGAAGGATCAGCGTCCGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: LSLPAWCVSGRR*RRGRRISVRAG
Trigger: GCCCGCGCGGACGCTGATCCTTCGCCCACGTCGCCACCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS CCA 72 bp GTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCCAGCGCAGCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: VLFRTLSVRGSG*HWCAEASAALG
Trigger: CCCCAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430743.1
CDS CCA 72 bp GTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCCAGCGCAGCCCTGACG +
Preference number: 6 (lower is better)
Translates to: VLFRTLSVRGSG*HWCAEASAALT
Trigger: CGTCAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000369908.9
CDS CCA 72 bp TTCAGGACGCTCAGCGTCCGGGGCAGCGGGTGGCACTaGTGTGCCGAGGCCAGCGCAGCCCTCCTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: FRTLSVRGSGWH*CAEASAALLQL
Trigger: CAGCTGGAGGAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS CCA 72 bp GTGCTCTTCAGGACGCTCAGCGTCCGGGGCAGCGGGTaGCACTGGTGTGCCGAGGCCAGCGCAGCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: VLFRTLSVRGSG*HWCAEASAALL
Trigger: GAGGAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAAGAGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS CCA 72 bp TTCAGGACGCTCAGCGTCCGGGGCAGCGGGTGGCACTaGTGTGCCGAGGCCAGCGCAGCCCTGACGCTGAGT +
Preference number: 6 (lower is better)
Translates to: FRTLSVRGSGWH*CAEASAALTLS
Trigger: ACTCAGCGTCAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGCTGCCCCGGACGCTGAGCGTCCTGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000369908.9
CDS GCA 72 bp CTGCGGTCCTCGCACGCGGTCTCGCTTTTCTCAGCCTaGCGGCCTGGTGTGTCTCGGGCCGTAGGTGGCGAC +
Preference number: 6 (lower is better)
Translates to: LRSSHAVSLFSA*RPGVSRAVGGD
Trigger: GTCGCCACCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGAGACCGCGTGCGAGGACCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354216.11
ENST00000358711.7
CDS CCA 72 bp CTCGCACGCGGTCTCGCTTTTCTCAGCCTGCCGGCCTaGTGTGTCTCGGGCCGTAGGTGGCGACGTGGGCGA +
Preference number: 6 (lower is better)
Translates to: LARGLAFLSLPA*CVSGRRWRRGR
Trigger: TCGCCCACGTCGCCACCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGAGACCGCGTGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000483710.1
CDS GCA 72 bp GTGCCGAGGCCAGCGCAGCCCTCCTCCAGCTGGCTGTaGACGTGCTGCACAATCAGGTCGATGGCCACCGTG +
Preference number: 6 (lower is better)
Translates to: VPRPAQPSSSWL*TCCTIRSMATV
Trigger: CACGGTGGCCATCGACCTGATTGTGCAGCACGTGCACAGCCAGCTGGAGGAGGGCTGCGCTGGCCTCGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS GCA 72 bp GGCCCTCACCTGATGATGGTGTGCATGCCCCGTACCTaGGGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: GPHLMMVCMPRT*GVLFRTLSVRG
Trigger: GCCCCGGACGCTGAGCGTCCTGAAGAGCACGCCGCAGGTACGGGGCATGCACACCATCATCAGGTGAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS GCA 72 bp AAGCGGTCCTCGCACGCGGTCTCGCTTTTCTCAGCCTaGCGGCCTGGTGTGTCTCGGGCCGTAGGTGGCGAC +
Preference number: 6 (lower is better)
Translates to: KRSSHAVSLFSA*RPGVSRAVGGD
Trigger: GTCGCCACCTACGGCCCGAGACACACCAGGCCGGCAGGCTGAGAAAAGCGAGACCGCGTGCGAGGACCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS CCA 72 bp CCTGAACTGGCCCTTCCATGGGCAGGACCACTCCTGTaGGCAGCACAGTGGGTGCAGAGCCGGGTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PELALPWAGPLL*AAQWVQSRVAG
Trigger: CCCAGCCACCCGGCTCTGCACCCACTGTGCTGCCCACAGGAGTGGTCCTGCCCATGGAAGGGCCAGTTCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369908.9
CDS CCA 72 bp GCGGGTGGCACTGGTGTGCCGAGGCCAGCGCAGCCCTaGGGACAAACCGATGGGGAACACTCAAGAAGGGGG +
Preference number: 6 (lower is better)
Translates to: AGGTGVPRPAQP*GQTDGEHSRRG
Trigger: CCCCCTTCTTGAGTGTTCCCCATCGGTTTGTCCCCAGGGCTGCGCTGGCCTCGGCACACCAGTGCCACCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430743.1
CDS GCA 72 bp CTCCCAAGCCGATGGCGAAGGCCTCTTTGGATTGCGTaGCGTGTTCATTGTACCAGGGCGGCCGCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: LPSRWRRPLWIA*RVHCTRAAARR
Trigger: CCGCCGGGCGGCCGCCCTGGTACAATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCATCGGCTTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 72 bp CCGCCTCCCAAGCCGATGGCGAAGGCCTCTTTGGATTaGGTGCCGTGTTCATTGTACCAGGGCGGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: PPPKPMAKASLD*VPCSLYQGGRP
Trigger: CGGGCGGCCGCCCTGGTACAATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCATCGGCTTGGGAGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 72 bp CCAGCGCAGCCCTCCTCCAGCTGGCTGTGCACGTGCTaGACAATCAGGTCGATGGCCACCGTGTTGCCGCTC +
Preference number: 6 (lower is better)
Translates to: PAQPSSSWLCTC*TIRSMATVLPL
Trigger: GAGCGGCAACACGGTGGCCATCGACCTGATTGTGCAGCACGTGCACAGCCAGCTGGAGGAGGGCTGCGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS CCA 72 bp TTGTACGCAGCAGGGGAGGCTCTGACTTGCACTGGCTaGTGGTCCGCTTCCGGGGAGAGCGCCCAGTGCCCA +
Preference number: 6 (lower is better)
Translates to: LYAAGEALTCTG*WSASGESAQCP
Trigger: TGGGCACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 72 bp GCTCAGGAGCTCCGGCCACCTGAACTGGCCCTTCCATaGGCAGGACCACTCCTGTGGGCAGCACAGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AQELRPPELALP*AGPLLWAAQWV
Trigger: CACCCACTGTGCTGCCCACAGGAGTGGTCCTGCCCATGGAAGGGCCAGTTCAGGTGGCCGGAGCTCCTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369908.9
CDS CCA 72 bp GTGCGGGACCCCTCCTGCGCTAAGAGGAAGCAGAAGTaGGCCGGGCACAGGGCGGGCTCACACGTGCTGATA +
Preference number: 6 (lower is better)
Translates to: VRDPSCAKRKQK*AGHRAGSHVLI
Trigger: TATCAGCACGTGTGAGCCCGCCCTGTGCCCGGCCCACTTCTGCTTCCTCTTAGCGCAGGAGGGGTCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430743.1
CDS CAA 72 bp AGGGCGGCCGCCCGGCGGTGTAGATGGTACGCTTGCTaGTACGCAGCAGGGGAGGCTCTGACTTGCACTGGC +
Preference number: 6 (lower is better)
Translates to: RAAARRCRWYAC*YAAGEALTCTG
Trigger: GCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACACCGCCGGGCGGCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CAA 72 bp GCCGCCTCCCAAGCCGATGGCGAAGGCCTCTTTGGATaGCGTGCCGTGTTCATTGTACCAGGGCGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: AASQADGEGLFG*RAVFIVPGRPP
Trigger: GGGCGGCCGCCCTGGTACAATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCATCGGCTTGGGAGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CAA 90 bp AGAGGCACTGCCGCCTCCCAAGCCGATGGCGAAGGCCTCTTTGGATaGCGTGCCGTGTTCATTGTACCAGGGCGGCCGCCCGGCGGTGTA +
Preference number: 6 (lower is better)
Translates to: RGTAASQADGEGLFG*RAVFIVPGRPPGGV
Trigger: TACACCGCCGGGCGGCCGCCCTGGTACAATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCATCGGCTTGGGAGGCGGCAGTGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 72 bp TACGCTTGCTTGTACGCAGCAGGGGAGGCTCTGACTTaGACTGGCTGGTGGTCCGCTTCCGGGGAGAGCGCC +
Preference number: 6 (lower is better)
Translates to: YACLYAAGEALT*TGWWSASGESA
Trigger: GGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS GCA 72 bp ACCAGGGCGGCCGCCCGGCGGTGTAGATGGTACGCTTaGTTGTACGCAGCAGGGGAGGCTCTGACTTGCACT +
Preference number: 6 (lower is better)
Translates to: TRAAARRCRWYA*LYAAGEALTCT
Trigger: AGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACACCGCCGGGCGGCCGCCCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS GCA 72 bp TCCTTGTCCCTGATGATGGTGTGCATGCCCCGTACCTaGGGCGTGCTCTTCAGGACGCTCAGCGTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: SLSLMMVCMPRT*GVLFRTLSVRG
Trigger: GCCCCGGACGCTGAGCGTCCTGAAGAGCACGCCGCAGGTACGGGGCATGCACACCATCATCAGGGACAAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000369908.9
ENST00000430743.1
ENST00000632800.1
CDS CCA 72 bp TTGCTTGTACGCAGCAGGGGAGGCTCTGACTTGCACTaGCTGGTGGTCCGCTTCCGGGGAGAGCGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: LLVRSRGGSDLH*LVVRFRGERPV
Trigger: CACTGGGCGCTCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 72 bp CCAGCTGGCTGTGCACGTGCTGCACAATCAGGTCGATaGCCACCGTGTTGCCGCTCCCTCTGGGGACCACGA +
Preference number: 6 (lower is better)
Translates to: PAGCARAAQSGR*PPCCRSLWGPR
Trigger: TCGTGGTCCCCAGAGGGAGCGGCAACACGGTGGCCATCGACCTGATTGTGCAGCACGTGCACAGCCAGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CCA 72 bp AAGATGAACTCGTCGCGACTGGTCTCCTTGTCCCTGTaGGGCCAACAGTTGAGCGGGAGCACGCGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: KMNSSRLVSLSL*GQQLSGSTRPG
Trigger: CCCCGGGCGCGTGCTCCCGCTCAACTGTTGGCCCCACAGGGACAAGGAGACCAGTCGCGACGAGTTCATCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358711.7
CDS CAA 90 bp CATTGTACCAGGGCGGCCGCCCGGCGGTGTAGATGGTACGCTTGCTaGTACGCAGCAGGGGAGGCTCTGACTTGCACTGGCTGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: HCTRAAARRCRWYAC*YAAGEALTCTGWWS
Trigger: GGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACACCGCCGGGCGGCCGCCCTGGTACAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CAA 90 bp GTAAGCTGGTTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTaGCACACAGCGCGCAGCGCGGGCTCCATGGTTTCACCGGCGCGC +
Preference number: 6 (lower is better)
Translates to: VSWLVWMRMVPMRTS*HTARSAGSMVSPAR
Trigger: GCGCGCCGGTGAAACCATGGAGCCCGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACCAACCAGCTTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000430743.1
ENST00000632800.1
CDS CAA 90 bp TGGGCAGCACAGTGGGTGCAGAGCCGGGTGGCTGGGGTGAGACCCTaGGCTGGCAGAAGCTGCCTGCCAAATGTCAGCAGAGGCACAGCA +
Preference number: 6 (lower is better)
Translates to: WAAQWVQSRVAGVRP*AGRSCLPNVSRGTA
Trigger: TGCTGTGCCTCTGCTGACATTTGGCAGGCAGCTTCTGCCAGCCAAGGGTCTCACCCCAGCCACCCGGCTCTGCACCCACTGTGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369908.9
CDS GCA 72 bp CACCGTGTTGCCGCTCCCTCTGGGGACCACGATGTCTaGCAGGCGCATGGTGGGCTGGATGTACTGGTCGAA +
Preference number: 6 (lower is better)
Translates to: HRVAAPSGDHDV*QAHGGLDVLVE
Trigger: TTCGACCAGTACATCCAGCCCACCATGCGCCTGGCAGACATCGTGGTCCCCAGAGGGAGCGGCAACACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 72 bp CTCCGCAAACGGCAGGACCGCCTCTTTGTAGCTTCCTaGAGCGGCACAGTCTGTCCACCGCGCTCCGGAGTT +
Preference number: 6 (lower is better)
Translates to: LRKRQDRLFVAS*SGTVCPPRSGV
Trigger: AACTCCGGAGCGCGGTGGACAGACTGTGCCGCTGCAGGAAGCTACAAAGAGGCGGTCCTGCCGTTTGCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS CCA 72 bp GTTCATTGTACCAGGGCGGCCGCCCGGCGGTGTAGATaGTACGCTTGCTTGTACGCAGCAGGGGAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: VHCTRAAARRCR*YACLYAAGEAL
Trigger: CAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATCTACACCGCCGGGCGGCCGCCCTGGTACAATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 72 bp CACTGCCGCCTCCCAAGCCGATGGCGAAGGCCTCTTTaGATTGCGTGCCGTGTTCATTGTACCAGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: HCRLPSRWRRPL*IACRVHCTRAA
Trigger: GGCCGCCCTGGTACAATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCATCGGCTTGGGAGGCGGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000492660.1
ENST00000632800.1
CDS CAA 72 bp GCACTGCCGCCTCCCAAGCCGATGGCGAAGGCCTCTTaGGATTGCGTGCCGTGTTCATTGTACCAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: ALPPPKPMAKAS*DCVPCSLYQGG
Trigger: GCCGCCCTGGTACAATGAACACGGCACGCAATCCAAAGAGGCCTTCGCCATCGGCTTGGGAGGCGGCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000492660.1
ENST00000632800.1
CDS TCA 72 bp GATGGTACGCTTGCTTGTACGCAGCAGGGGAGGCTCTaGCTTGCACTGGCTGGTGGTCCGCTTCCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: DGTLACTQQGRL*LALAGGPLPGR
Trigger: TCTCCCCGGAAGCGGACCACCAGCCAGTGCAAGTCAGAGCCTCCCCTGCTGCGTACAAGCAAGCGTACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000483710.1
ENST00000632800.1
CDS CCA 72 bp GTGCGGCTGAAGGGCCCGGGCAGCCTCACCAATGCCTaGGATGATGCGGAAAAGGTCATTGACCCGCTTGTC +
Preference number: 6 (lower is better)
Translates to: VRLKGPGSLTNA*DDAEKVIDPLV
Trigger: GACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGTGAGGCTGCCCGGGCCCTTCAGCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632800.1
CDS CAA 90 bp GCCCGGGCAGCCTCACCAATGCCTGGGATGATGCGGAAAAGGTCATaGACCCGCTTGTCCACCGCCGTGGTGATGATTCTCACTCGCGGA +
Preference number: 6 (lower is better)
Translates to: ARAASPMPGMMRKRS*TRLSTAVVMILTRG
Trigger: TCCGCGAGTGAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGTGAGGCTGCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632800.1
CDS CCA 72 bp GTCGCCCTACCTGAGCTGTCAGGCAAAGGCGAAAGATaGCGGCGAACAACGGGGCAAGCTCACCATCAGGCA +
Preference number: 6 (lower is better)
Translates to: VALPELSGKGER*RRTTGQAHHQA
Trigger: TGCCTGATGGTGAGCTTGCCCCGTTGTTCGCCGCCATCTTTCGCCTTTGCCTGACAGCTCAGGTAGGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430743.1
CDS CCA 72 bp CTTCCTCTGCTGACGCTGAGTTCACGCTCCTCCAGCTaGCTGTGCACGTGCTGCACAATCAGGTCGATGGCC +
Preference number: 6 (lower is better)
Translates to: LPLLTLSSRSSS*LCTCCTIRSMA
Trigger: GGCCATCGACCTGATTGTGCAGCACGTGCACAGCCAGCTGGAGGAGCGTGAACTCAGCGTCAGCAGAGGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632800.1
CDS CAA 72 bp TTGGTCTGGATGAGGATGGTGCCGATGCGCACGTCTTaGCACACAGCGCGCAGCGCGGGCTCCATGGTTTCA +
Preference number: 6 (lower is better)
Translates to: LVWMRMVPMRTS*HTARSAGSMVS
Trigger: TGAAACCATGGAGCCCGCGCTGCGCGCTGTGTGCAAAGACGTGCGCATCGGCACCATCCTCATCCAGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000430743.1
ENST00000632800.1
CDS CCA 72 bp CTGGGGACCACGATGTCTGCCAGGCGCATGGTGGGCTaGATGTACTGGTCGAAGGAGGGCTTGACAAACTTG +
Preference number: 6 (lower is better)
Translates to: LGTTMSARRMVG*MYWSKEGLTNL
Trigger: CAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCACCATGCGCCTGGCAGACATCGTGGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CAA 90 bp CGCATGGTGGGCTGGATGTACTGGTCGAAGGAGGGCTTGACAAACTaGTTGTACTGCTTGATGACACCCTCGATGTCCCGGCCGCGCTCA +
Preference number: 6 (lower is better)
Translates to: RMVGWMYWSKEGLTN*LYCLMTPSMSRPRS
Trigger: TGAGCGCGGCCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCACCATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CCA 72 bp CAGTCTGTCCACCGCGCTCCGGAGTTCCACAGGAAATaGAACGCTCCACAGATGCCAGTTACGCCCGAAAAC +
Preference number: 6 (lower is better)
Translates to: QSVHRAPEFHRK*NAPQMPVTPEN
Trigger: GTTTTCGGGCGTAACTGGCATCTGTGGAGCGTTCCATTTCCTGTGGAACTCCGGAGCGCGGTGGACAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS CAA 90 bp TGGATGTACTGGTCGAAGGAGGGCTTGACAAACTTGTTGTACTGCTaGATGACACCCTCGATGTCCCGGCCGCGCTCACTGATGTCCCGG +
Preference number: 6 (lower is better)
Translates to: WMYWSKEGLTNLLYC*MTPSMSRPRSLMSR
Trigger: CCGGGACATCAGTGAGCGCGGCCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CAA 90 bp ATGGTGGGCTGGATGTACTGGTCGAAGGAGGGCTTGACAAACTTGTaGTACTGCTTGATGACACCCTCGATGTCCCGGCCGCGCTCACTG +
Preference number: 6 (lower is better)
Translates to: MVGWMYWSKEGLTNL*YCLMTPSMSRPRSL
Trigger: CAGTGAGCGCGGCCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CAA 90 bp TCTGCCAGGCGCATGGTGGGCTGGATGTACTGGTCGAAGGAGGGCTaGACAAACTTGTTGTACTGCTTGATGACACCCTCGATGTCCCGG +
Preference number: 6 (lower is better)
Translates to: SARRMVGWMYWSKEG*TNLLYCLMTPSMSR
Trigger: CCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCACCATGCGCCTGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 72 bp ATGCCAGTTACGCCCGAAAACGACACAGAACACAGGTaGGGACAGGGAACGGCATCCTCAGAGCATGGTCAG +
Preference number: 6 (lower is better)
Translates to: MPVTPENDTEHR*GQGTASSEHGQ
Trigger: CTGACCATGCTCTGAGGATGCCGTTCCCTGTCCGCACCTGTGTTCTGTGTCGTTTTCGGGCGTAACTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS CAA 72 bp TGGTCGAAGGAGGGCTTGACAAACTTGTTGTACTGCTaGATGACACCCTCGATGTCCCGGCCGCGCTCACTG +
Preference number: 6 (lower is better)
Translates to: WSKEGLTNLLYC*MTPSMSRPRSL
Trigger: CAGTGAGCGCGGCCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CAA 72 bp GCCTCACCAATGCCTGGGATGATGCGGAAAAGGTCATaGACCCGCTTGTCCACCGCCGTGGTGATGATTCTC +
Preference number: 6 (lower is better)
Translates to: ASPMPGMMRKRS*TRLSTAVVMIL
Trigger: GAGAATCATCACCACGGCGGTGGACAAGCGGGTCAATGACCTTTTCCGCATCATCCCAGGCATTGGTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632800.1
CDS GCA 72 bp TACTGGTCGAAGGAGGGCTTGACAAACTTGTTGTACTaGTTGATGACACCCTCGATGTCCCGGCCGCGCTCA +
Preference number: 6 (lower is better)
Translates to: YWSKEGLTNLLY*LMTPSMSRPRS
Trigger: TGAGCGCGGCCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CCA 72 bp ACGATGTCTGCCAGGCGCATGGTGGGCTGGATGTACTaGTCGAAGGAGGGCTTGACAAACTTGTTGTACTGC +
Preference number: 6 (lower is better)
Translates to: TMSARRMVGWMY*SKEGLTNLLYC
Trigger: GCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCACCATGCGCCTGGCAGACATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS GCA 72 bp CTCCGGAGTTCCACAGGAAATGGAACGCTCCACAGATaGCAGTTACGCCCGAAAACGACACAGAACACAGGT +
Preference number: 6 (lower is better)
Translates to: LRSSTGNGTLHR*QLRPKTTQNTG
Trigger: ACCTGTGTTCTGTGTCGTTTTCGGGCGTAACTGGCATCTGTGGAGCGTTCCATTTCCTGTGGAACTCCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483710.1
CDS CAA 72 bp ATGAGGTCGAAGTCAAAGGCATCTGGGTGGTCGAAGTaGAAGTTGTTGTGTGCGGCCTGTTCCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: MRSKSKASGWSK*KLLCAACSCCC
Trigger: GCAGCAGCAGGAACAGGCCGCACACAACAACTTCAACTTCGACCACCCAGATGCCTTTGACTTCGACCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000492660.1
ENST00000632800.1
CDS CAA 72 bp TGGATGTACTGGTCGAAGGAGGGCTTGACAAACTTGTaGTACTGCTTGATGACACCCTCGATGTCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: WMYWSKEGLTNL*YCLMTPSMSRP
Trigger: CGGCCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CAA 72 bp GGCTGGATGTACTGGTCGAAGGAGGGCTTGACAAACTaGTTGTACTGCTTGATGACACCCTCGATGTCCCGG +
Preference number: 6 (lower is better)
Translates to: GWMYWSKEGLTN*LYCLMTPSMSR
Trigger: CCGGGACATCGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CAA 72 bp CGCATGGTGGGCTGGATGTACTGGTCGAAGGAGGGCTaGACAAACTTGTTGTACTGCTTGATGACACCCTCG +
Preference number: 6 (lower is better)
Translates to: RMVGWMYWSKEG*TNLLYCLMTPS
Trigger: CGAGGGTGTCATCAAGCAGTACAACAAGTTTGTCAAGCCCTCCTTCGACCAGTACATCCAGCCCACCATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000632800.1
CDS CCA 72 bp GTGGAAATGATGAGGTCGAAGTCAAAGGCATCTGGGTaGTCGAAGTTGAAGTTGTTGTGTGCGGCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: VEMMRSKSKASG*SKLKLLCAACS
Trigger: GGAACAGGCCGCACACAACAACTTCAACTTCGACCACCCAGATGCCTTTGACTTCGACCTCATCATTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354216.11
ENST00000358711.7
ENST00000369908.9
ENST00000492660.1
ENST00000632800.1