RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UCHL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154277

Ensembl transcript IDs: ENST00000284440.9, ENST00000381760.8, ENST00000472501.5, ENST00000503431.5, ENST00000504818.5, ENST00000505232.5, ENST00000508768.5, ENST00000510566.1, ENST00000512419.5, ENST00000512788.1, ENST00000514924.5

Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGGAAATCAGCAAAGTCCCTCCCACAGAGCATTAGGCTGCCTTaGAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCT +
Preference number: 1 (lower is better)
Translates to: EGKSAKSLPQSIRLP*REPRQRSGLLLAHA
Trigger: AGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTGGGAGGGACTTTGCTGATTTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
3UTR GCA 90 bp GGGAAGAGGGGAAATCAGCAAAGTCCCTCCCACAGAGCATTAGGCTaGCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTC +
Preference number: 1 (lower is better)
Translates to: GKRGNQQSPSHRALG*LAESHGREADFSLL
Trigger: GAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTGGGAGGGACTTTGCTGATTTCCCCTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512419.5
3UTR GCA 90 bp CTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTaGACTCTGCTTGTGCTTAAGTGCCTGGGTGTGGCTGAGGGGAAG +
Preference number: 1 (lower is better)
Translates to: LHHLKLTPQWPSGQL*TLLVLKCLGVAEGK
Trigger: CTTCCCCTCAGCCACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR CCA 90 bp CCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTaGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGT +
Preference number: 1 (lower is better)
Translates to: PVDSCALCLCLSAWV*LRGRRVCRTEEQLC
Trigger: ACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR CCA 90 bp AATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTaGGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAG +
Preference number: 1 (lower is better)
Translates to: NGPVDSCALCLCLSA*VWLRGRRVCRTEEQ
Trigger: CTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR GCA 90 bp TGCTTGTGCTTAAGTGCCTGGGTGTGGCTGAGGGGAAGGCGTGTCTaGAGAACAGAAGAACAGCTGTGTTTCACAAGTACTGAAGCATTT +
Preference number: 1 (lower is better)
Translates to: CLCLSAWVWLRGRRV*RTEEQLCFTSTEAF
Trigger: AAATGCTTCAGTACTTGTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACCCAGGCACTTAAGCACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
3UTR-3UTR TCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTCAGCAGGGTGTCCTCTaGACTGGCGCCATGGTTCAC +
Preference number: 2 (lower is better)
Translates to: CLAESHGREADFSLLTLGQQGVL*TGAMVH
Trigger: GTGAACCATGGCGCCAGTTCAGAGGACACCCTGCTG...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
3UTR-3UTR TCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCCTGGGTGTGGCTaGGGGGAAGGCGTGTCTGCA +
Preference number: 2 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLVPGCG*GEGVSA
Trigger: TGCAGACACGCCTTCCCCTCAGCCACACCCAGGCAC...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR-3UTR GCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTCACAGAGCATTAGGCTaGCTTGCAGAGAGCCACGGC +
Preference number: 2 (lower is better)
Translates to: CLAESHGREADFSLLTLGHRALG*LAESHG
Trigger: GCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTG...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
3UTR-3UTR TCA 90 bp TTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATCAGCAGGGTGTCCTCTaGACTGGCGCCATGGTTCAC +
Preference number: 2 (lower is better)
Translates to: LQRATAEKRTSPCSRSVNQQGVL*TGAMVH
Trigger: GTGAACCATGGCGCCAGTTCAGAGGACACCCTGCTG...ATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
3UTR-3UTR GCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTCCCAGTGGACAGCTGTaGACTCTGCTTGTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: CLAESHGREADFSLLTLGPSGQL*TLLVLK
Trigger: CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGG...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
3UTR-3UTR GCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTCACGGCATCATGGGCTaGCTGTATGGCCTCATTCTT +
Preference number: 2 (lower is better)
Translates to: CLAESHGREADFSLLTLGHGIMG*LYGLIL
Trigger: AAGAATGAGGCCATACAGGCAGCCCATGATGCCGTG...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
3UTR-3UTR TCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTCTTGCTCACGCTCGGTaGATTCTCTGCAGACCTTGG +
Preference number: 2 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLLAHAR*ILCRPW
Trigger: CCAAGGTCTGCAGAGAATTCACCGAGCGTGAGCAAG...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
3UTR-3UTR GCA 90 bp CAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTGAGGGGAAGGCGTGTCTaGAGAACAGAAGAACAGCTG +
Preference number: 2 (lower is better)
Translates to: QWPSGQLCTLLVLKCLGVRGRRV*RTEEQL
Trigger: CAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCT...CACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR-3UTR CCA 90 bp TCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTATTCTCTGCAGACCTTaGCAGCGTCCTTCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SPSEAHTTMAQWTAVHSAILCRP*QRPSAG
Trigger: CCCTGCTGAAGGACGCTGCCAAGGTCTGCAGAGAAT...AGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
3UTR-3UTR GCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTTTGATTATTGGCCACTaGGTGAATAAGTCCGATTGT +
Preference number: 2 (lower is better)
Translates to: CLAESHGREADFSLLTLGLIIGH*VNKSDC
Trigger: ACAATCGGACTTATTCACGCAGTGGCCAATAATCAA...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
3UTR-3UTR TCA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTTTATTGGCCACTGCGTaGATAAGTCCGATTGTGCCA +
Preference number: 2 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTLLATA*ISPIVP
Trigger: TGGCACAATCGGACTTATTCACGCAGTGGCCAATAA...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
3UTR-3UTR TCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGTTTCACAAGTACTaGAGCATTTTAGACTGCATG +
Preference number: 2 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLVFHKY*SILDCM
Trigger: CATGCAGTCTAAAATGCTTCAGTACTTGTGAAACAC...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR-3UTR TCA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTAAACTGTTTCAGAACTaGTCCATCCTCAAATCCCAG +
Preference number: 2 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTKLFQN*SILKSQ
Trigger: CTGGGATTTGAGGATGGATCAGTTCTGAAACAGTTT...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
3UTR-3UTR TCA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGGTGTTTCACAAGTACTaGAGCATTTTAGACTGCATG +
Preference number: 2 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKVFHKY*SILDCM
Trigger: CATGCAGTCTAAAATGCTTCAGTACTTGTGAAACAC...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR-3UTR CCA 90 bp CCATTTAAAGCGTTAGATATCGGATACAAGACATACACTGGGGAGAATGCTTCAAAGCTCACACCACAATaGCCCAGTGGACAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: PFKALDIGYKTYTGENASKLTPQ*PSGQLC
Trigger: GCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT...TGAAGCATTCTCCCCAGTGTATGTCTTGTATCCGATATCTAACGCTTTAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR-3UTR GCA 90 bp CCATTTAAAGCGTTAGATATCGGATACAAGACATACACTGGGGAGAATGCTTCAAGGGGAAGGCGTGTCTaGAGAACAGAAGAACAGCTG +
Preference number: 2 (lower is better)
Translates to: PFKALDIGYKTYTGENASRGRRV*RTEEQL
Trigger: CAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCT...TGAAGCATTCTCCCCAGTGTATGTCTTGTATCCGATATCTAACGCTTTAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR GCA 72 bp CACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTaGTTAAGTGCCTGGGTGTGGCTGAGGGGAAGGCGT +
Preference number: 3 (lower is better)
Translates to: HNGPVDSCALCL*LSAWVWLRGRR
Trigger: ACGCCTTCCCCTCAGCCACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR GCA 72 bp CTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTaGACTCTGCTTGTGCTTAAGTGCCTGGGTGTGGCT +
Preference number: 3 (lower is better)
Translates to: LKLTPQWPSGQL*TLLVLKCLGVA
Trigger: AGCCACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
3UTR GCA 72 bp TCAGCAAAGTCCCTCCCACAGAGCATTAGGCTGCCTTaGAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: SAKSLPQSIRLP*REPRQRSGLLL
Trigger: AAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTGGGAGGGACTTTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
3UTR CCA 72 bp AGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTaGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAA +
Preference number: 3 (lower is better)
Translates to: SCALCLCLSAWV*LRGRRVCRTEE
Trigger: TTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
3UTR-3UTR CAA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTAAATCCCAGTTTGTCTaGATTATTGGCCACTGCGTG +
Preference number: 3 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTKSQFV*IIGHCV
Trigger: CACGCAGTGGCCAATAATCAAGACAAACTGGGATTT...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS-3UTR CCA 90 bp TTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LQRATAEKRTSPCSRSVNSTKRH*PATPSR
Trigger: CCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGA...ATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR CCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLSTKRH*PATPSR
Trigger: CCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGA...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHSTKRH*PATPSR
Trigger: CCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CCA 90 bp CAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTGCGCGCAGGCAGGCGCTaGCACCGAGCCCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: QWPSGQLCTLLVLKCLGVRAGRR*HRAQRL
Trigger: GAGTCTCTGGGCTCGGTGCCAGCGCCTGCCTGCGCG...CACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACCGCGCAGGCAGGCGCTaGCACCGAGCCCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHRAGRR*HRAQRL
Trigger: GAGTCTCTGGGCTCGGTGCCAGCGCCTGCCTGCGCG...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR TCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTTCTCATGCTGGGCCGTaGGGGGAAACAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLAESHGREADFSLLTLGSHAGP*GETAAA
Trigger: TGCTGCTGCTGTTTCCCCTCACGGCCCAGCATGAGA...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR TCA 90 bp TTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATGTGCCTGGGTGTGGCTaGGGGGAAGGCGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LQRATAEKRTSPCSRSVNVPGCG*GEGVSA
Trigger: TGCAGACACGCCTTCCCCTCAGCCACACCCAGGCAC...ATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS-3UTR GCA 90 bp CTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATCCATCGGCTTGAGCTaGATCTTCGCGGAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: LAESHGREADFSLLTLGESIGLS*IFAERP
Trigger: CGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGA...TTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR TCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACGTGCCTGGGTGTGGCTaGGGGGAAGGCGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHVPGCG*GEGVSA
Trigger: TGCAGACACGCCTTCCCCTCAGCCACACCCAGGCAC...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR GCA 90 bp TTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATTCCATCGGCTTGAGCTaGATCTTCGCGGAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: LQRATAEKRTSPCSRSVNSIGLS*IFAERP
Trigger: CGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGA...ATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR CCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTTTAAGTGCCTGGGTGTaGCTGAGGGGAAGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: CLAESHGREADFSLLTLGLSAWV*LRGRRV
Trigger: GACACGCCTTCCCCTCAGCCACACCCAGGCACTTAA...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS-3UTR TCA 90 bp AGAGCATTAGGCTGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGTCTCATGCTGGGCCGTaGGGGGAAACAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RALGCLAESHGREADFSLSHAGP*GETAAA
Trigger: TGCTGCTGCTGTTTCCCCTCACGGCCCAGCATGAGA...CAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR TCA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTGTGCCTGGGTGTGGCTaGGGGGAAGGCGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTVPGCG*GEGVSA
Trigger: TGCAGACACGCCTTCCCCTCAGCCACACCCAGGCAC...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTCCATCGGCTTGAGCTaGATCTTCGCGGAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHSIGLS*IFAERP
Trigger: CGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR GCA 90 bp CTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAAACATTGGCCTTCCTGTaGCACGGCATCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LAESHGREADFSLLTLGETLAFL*HGIMGC
Trigger: GCAGCCCATGATGCCGTGGCACAGGAAGGCCAATGT...TTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR GCA 90 bp GCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATTCCACAGAGCATTAGGCTaGCTTGCAGAGAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: AESHGREADFSLLTLGEFHRALG*LAESHG
Trigger: GCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTG...GAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR CCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTCTGAAGTTCTCATGCTaGGCCGTGAGGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: CLAESHGREADFSLLTLGLKFSC*AVRGNS
Trigger: GCTGTTTCCCCTCACGGCCCAGCATGAGAACTTCAG...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR TCA 90 bp TCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTCTCATGCTGGGCCGTaGGGGGAAACAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPSEAHTTMAQWTAVHSASHAGP*GETAAA
Trigger: TGCTGCTGCTGTTTCCCCTCACGGCCCAGCATGAGA...AGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR TCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTCTCATGCTGGGCCGTaGGGGGAAACAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHSHAGP*GETAAA
Trigger: TGCTGCTGCTGTTTCCCCTCACGGCCCAGCATGAGA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR TCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACCAGCAGGGTGTCCTCTaGACTGGCGCCATGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHQQGVL*TGAMVH
Trigger: GTGAACCATGGCGCCAGTTCAGAGGACACCCTGCTG...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR TCA 90 bp CTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAACTTGCTCACGCTCGGTaGATTCTCTGCAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LAESHGREADFSLLTLGELAHAR*ILCRPW
Trigger: CCAAGGTCTGCAGAGAATTCACCGAGCGTGAGCAAG...TTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR GCA 90 bp AGAGCATTAGGCTGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGACATTGGCCTTCCTGTaGCACGGCATCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RALGCLAESHGREADFSLTLAFL*HGIMGC
Trigger: GCAGCCCATGATGCCGTGGCACAGGAAGGCCAATGT...CAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR CCA 90 bp AGAGCATTAGGCTGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGTGTGCCACGGCATCATaGGCTGCCTGTATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RALGCLAESHGREADFSLCATAS*AACMAS
Trigger: TGAGGCCATACAGGCAGCCCATGATGCCGTGGCACA...CAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR CCA 90 bp GCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATTCTCATCTACCCGACATTaGCCTTCCTGTGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: AESHGREADFSLLTLGEFSSTRH*PSCATA
Trigger: TGCCGTGGCACAGGAAGGCCAATGTCGGGTAGATGA...GAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS-3UTR CCA 90 bp CTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAAATTCTCTGCAGACCTTaGCAGCGTCCTTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LAESHGREADFSLLTLGEILCRP*QRPSAG
Trigger: CCCTGCTGAAGGACGCTGCCAAGGTCTGCAGAGAAT...TTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR TCA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGCAGCAGGGTGTCCTCTaGACTGGCGCCATGGTTCAC +
Preference number: 4 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKQQGVL*TGAMVH
Trigger: GTGAACCATGGCGCCAGTTCAGAGGACACCCTGCTG...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACACATTGGCCTTCCTGTaGCACGGCATCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHTLAFL*HGIMGC
Trigger: GCAGCCCATGATGCCGTGGCACAGGAAGGCCAATGT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR GCA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTAAGCGGACTTCTCCTTaGTCACGCTCGGTGAATTCT +
Preference number: 4 (lower is better)
Translates to: CLAESHGREADFSLLTLGKRTSP*SRSVNS
Trigger: AGAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTT...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR GCA 90 bp TTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATAGCATTAGGCTGCCTTaGAGAGAGCCACGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LQRATAEKRTSPCSRSVNSIRLP*REPRQR
Trigger: TCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCT...ATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR GCA 90 bp CAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTGAGCATTAGGCTGCCTTaGAGAGAGCCACGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QWPSGQLCTLLVLKCLGVSIRLP*REPRQR
Trigger: TCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCT...CACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACCACAGAGCATTAGGCTaGCTTGCAGAGAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHHRALG*LAESHG
Trigger: GCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTG...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR GCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTCACAGAGCATTAGGCTaGCTTGCAGAGAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLHRALG*LAESHG
Trigger: GCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTG...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp CTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAAAGGGGAAGGCGTGTCTaGAGAACAGAAGAACAGCTG +
Preference number: 4 (lower is better)
Translates to: LAESHGREADFSLLTLGERGRRV*RTEEQL
Trigger: CAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCT...TTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS-3UTR CCA 90 bp CAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTGCTGAAGTTCTCATGCTaGGCCGTGAGGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: QWPSGQLCTLLVLKCLGVLKFSC*AVRGNS
Trigger: GCTGTTTCCCCTCACGGCCCAGCATGAGAACTTCAG...CACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTGTGCCACGGCATCATaGGCTGCCTGTATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHCATAS*AACMAS
Trigger: TGAGGCCATACAGGCAGCCCATGATGCCGTGGCACA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR CCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTTGTGCCACGGCATCATaGGCTGCCTGTATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLCATAS*AACMAS
Trigger: TGAGGCCATACAGGCAGCCCATGATGCCGTGGCACA...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTTAAGTGCCTGGGTGTaGCTGAGGGGAAGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHLSAWV*LRGRRV
Trigger: GACACGCCTTCCCCTCAGCCACACCCAGGCACTTAA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CCA 90 bp TTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATAAGCTCACACCACAATaGCCCAGTGGACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LQRATAEKRTSPCSRSVNKLTPQ*PSGQLC
Trigger: GCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT...ATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS-3UTR CCA 90 bp AGAGCATTAGGCTGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTTGTCATCCGACATTaGCCTTCCTGTGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: RALGCLAESHGREADFSLLVIRH*PSCATA
Trigger: TGCCGTGGCACAGGAAGGCCAATGTCGGATGACAAG...CAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505232.5
CDS-3UTR TCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACCTTGCTCACGCTCGGTaGATTCTCTGCAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHLAHAR*ILCRPW
Trigger: CCAAGGTCTGCAGAGAATTCACCGAGCGTGAGCAAG...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR GCA 90 bp TTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATCACGGCATCATGGGCTaGCTGTATGGCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: LQRATAEKRTSPCSRSVNHGIMG*LYGLIL
Trigger: AAGAATGAGGCCATACAGGCAGCCCATGATGCCGTG...ATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACAGCATTAGGCTGCCTTaGAGAGAGCCACGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHSIRLP*REPRQR
Trigger: TCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR GCA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCACAGAGCATTAGGCTaGCTTGCAGAGAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTHRALG*LAESHG
Trigger: GCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTG...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACCTGAAGTTCTCATGCTaGGCCGTGAGGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHLKFSC*AVRGNS
Trigger: GCTGTTTCCCCTCACGGCCCAGCATGAGAACTTCAG...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CCA 90 bp TCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTCTGAAGTTCTCATGCTaGGCCGTGAGGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: SPSEAHTTMAQWTAVHSALKFSC*AVRGNS
Trigger: GCTGTTTCCCCTCACGGCCCAGCATGAGAACTTCAG...AGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CCA 90 bp TCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTCATCTACCCGACATTaGCCTTCCTGTGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: SPSEAHTTMAQWTAVHSASSTRH*PSCATA
Trigger: TGCCGTGGCACAGGAAGGCCAATGTCGGGTAGATGA...AGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTCATCTACCCGACATTaGCCTTCCTGTGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHSSTRH*PSCATA
Trigger: TGCCGTGGCACAGGAAGGCCAATGTCGGGTAGATGA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR CCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTATTCTCTGCAGACCTTaGCAGCGTCCTTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLILCRP*QRPSAG
Trigger: CCCTGCTGAAGGACGCTGCCAAGGTCTGCAGAGAAT...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACATTCTCTGCAGACCTTaGCAGCGTCCTTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHILCRP*QRPSAG
Trigger: CCCTGCTGAAGGACGCTGCCAAGGTCTGCAGAGAAT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CCA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTTTAAGTGCCTGGGTGTaGCTGAGGGGAAGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTLSAWV*LRGRRV
Trigger: GACACGCCTTCCCCTCAGCCACACCCAGGCACTTAA...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR TCA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGCTTGCTCACGCTCGGTaGATTCTCTGCAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKLAHAR*ILCRPW
Trigger: CCAAGGTCTGCAGAGAATTCACCGAGCGTGAGCAAG...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACCACGGCATCATGGGCTaGCTGTATGGCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHHGIMG*LYGLIL
Trigger: AAGAATGAGGCCATACAGGCAGCCCATGATGCCGTG...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACAGGGGAAGGCGTGTCTaGAGAACAGAAGAACAGCTG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHRGRRV*RTEEQL
Trigger: CAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTGTGCACTCTGCTTGTaGTTAAGTGCCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHCALCL*LSAWVW
Trigger: CCACACCCAGGCACTTAAGCACAAGCAGAGTGCACA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR GCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGACAGCTGTGCACTCTaGTTGTGCTTAAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLDSCAL*LCLSAW
Trigger: CCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTC...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACGACAGCTGTGCACTCTaGTTGTGCTTAAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHDSCAL*LCLSAW
Trigger: CCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTC...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR GCA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGCACGGCATCATGGGCTaGCTGTATGGCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKHGIMG*LYGLIL
Trigger: AAGAATGAGGCCATACAGGCAGCCCATGATGCCGTG...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTAAGCGGACTTCTCCTTaGTCACGCTCGGTGAATTCT +
Preference number: 4 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLKRTSP*SRSVNS
Trigger: AGAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTT...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACAAGCGGACTTCTCCTTaGTCACGCTCGGTGAATTCT +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHKRTSP*SRSVNS
Trigger: AGAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR GCA 90 bp TCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTAAGCGGACTTCTCCTTaGTCACGCTCGGTGAATTCT +
Preference number: 4 (lower is better)
Translates to: SPSEAHTTMAQWTAVHSAKRTSP*SRSVNS
Trigger: AGAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTT...AGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTTGTGCACTCTGCTTGTaGTTAAGTGCCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTCALCL*LSAWVW
Trigger: CCACACCCAGGCACTTAAGCACAAGCAGAGTGCACA...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTGACAGCTGTGCACTCTaGTTGTGCTTAAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTDSCAL*LCLSAW
Trigger: CCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTC...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGCCCAGTGGACAGCTGTaGACTCTGCTTGTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKPSGQL*TLLVLK
Trigger: CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGG...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR TCA 90 bp GCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATTCAAACTGTTTCAGAACTaGTCCATCCTCAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: AESHGREADFSLLTLGEFKLFQN*SILKSQ
Trigger: CTGGGATTTGAGGATGGATCAGTTCTGAAACAGTTT...GAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR TCA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTTATTGGCCACTGCGTaGATAAGTCCGATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKLLATA*ISPIVP
Trigger: TGGCACAATCGGACTTATTCACGCAGTGGCCAATAA...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR TCA 90 bp CAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTGAAACTGTTTCAGAACTaGTCCATCCTCAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: QWPSGQLCTLLVLKCLGVKLFQN*SILKSQ
Trigger: CTGGGATTTGAGGATGGATCAGTTCTGAAACAGTTT...CACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR TCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACAAACTGTTTCAGAACTaGTCCATCCTCAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHKLFQN*SILKSQ
Trigger: CTGGGATTTGAGGATGGATCAGTTCTGAAACAGTTT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR TCA 90 bp CAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTGGTGTTTCACAAGTACTaGAGCATTTTAGACTGCATG +
Preference number: 4 (lower is better)
Translates to: QWPSGQLCTLLVLKCLGVVFHKY*SILDCM
Trigger: CATGCAGTCTAAAATGCTTCAGTACTTGTGAAACAC...CACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR TCA 90 bp CCATTTAAAGCGTTAGATATCGGATACAAGACATACACTGGGGAGAATGCTTCACAGCAGGGTGTCCTCTaGACTGGCGCCATGGTTCAC +
Preference number: 4 (lower is better)
Translates to: PFKALDIGYKTYTGENASQQGVL*TGAMVH
Trigger: GTGAACCATGGCGCCAGTTCAGAGGACACCCTGCTG...TGAAGCATTCTCCCCAGTGTATGTCTTGTATCCGATATCTAACGCTTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR TCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACGTGTTTCACAAGTACTaGAGCATTTTAGACTGCATG +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHVFHKY*SILDCM
Trigger: CATGCAGTCTAAAATGCTTCAGTACTTGTGAAACAC...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR GCA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTTGATTATTGGCCACTaGGTGAATAAGTCCGATTGT +
Preference number: 4 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHLIIGH*VNKSDC
Trigger: ACAATCGGACTTATTCACGCAGTGGCCAATAATCAA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CCA 90 bp CAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTGAATGAGAATCAGCTGTaGCTATCTTATCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QWPSGQLCTLLVLKCLGVNENQL*LSYQQK
Trigger: TTTCTGCTGATAAGATAGCCACAGCTGATTCTCATT...CACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTTTGATTATTGGCCACTaGGTGAATAAGTCCGATTGT +
Preference number: 4 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTLIIGH*VNKSDC
Trigger: ACAATCGGACTTATTCACGCAGTGGCCAATAATCAA...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR GCA 90 bp CCATTTAAAGCGTTAGATATCGGATACAAGACATACACTGGGGAGAATGCTTCAACATTGGCCTTCCTGTaGCACGGCATCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PFKALDIGYKTYTGENASTLAFL*HGIMGC
Trigger: GCAGCCCATGATGCCGTGGCACAGGAAGGCCAATGT...TGAAGCATTCTCCCCAGTGTATGTCTTGTATCCGATATCTAACGCTTTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS GCA 90 bp GGCCCACACGTGGCGCCCGCGAAGCCCGTGCAGCCGAGTCTGTGCTaGCCGCGCCACGCCCTCGGGAGCTCCGCCTGGCGCTCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: GPHVAPAKPVQPSLC*PRHALGSSAWRSLA
Trigger: GGCGAGCGAGCGCCAGGCGGAGCTCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381760.8
ENST00000472501.5
CDS GCA 90 bp CGCGGCCCACACGTGGCGCCCGCGAAGCCCGTGCAGCCGAGTCTGTaGTGCCCGCGCCACGCCCTCGGGAGCTCCGCCTGGCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: RGPHVAPAKPVQPSL*CPRHALGSSAWRSL
Trigger: GAGCGAGCGCCAGGCGGAGCTCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381760.8
ENST00000472501.5
CDS GCA 90 bp GACACAGCACAAAGCGCGGCCCACACGTGGCGCCCGCGAAGCCCGTaGAGCCGAGTCTGTGCTGCCCGCGCCACGCCCTCGGGAGCTCCG +
Preference number: 5 (lower is better)
Translates to: DTAQSAAHTWRPRSP*SRVCAARATPSGAP
Trigger: CGGAGCTCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCGCTTTGTGCTGTGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381760.8
ENST00000472501.5
CDS GCA 90 bp TCCACGAAGCGCCACTGGCCGGCGACCCCCAGCCGGGACAGCACCTaGGGAGAGGAGACAAGGCGGCCAGGCGCACGGGGACACGCGGGT +
Preference number: 5 (lower is better)
Translates to: STKRHWPATPSRDST*GEETRRPGARGHAG
Trigger: ACCCGCGTGTCCCCGTGCGCCTGGCCGCCTTGTCTCCTCTCCGCAGGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381760.8
ENST00000472501.5
ENST00000504818.5
CDS CCA 90 bp CACCCGGGCCGGCGCAATGACACAGCACAAAGCGCGGCCCACACGTaGCGCCCGCGAAGCCCGTGCAGCCGAGTCTGTGCTGCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: HPGRRNDTAQSAAHT*RPRSPCSRVCAARA
Trigger: GGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCGCTTTGTGCTGTGTCATTGCGCCGGCCCGGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381760.8
ENST00000472501.5
ENST00000504818.5
CDS GCA 90 bp GACACAGCACAAAGCGCGGCCCACACGTGGCGCCCGCGAAGCCCGTaGAGCCGAGTCTGTGCTGCCCGCGCCACGCCCTCGGGGTTGATC +
Preference number: 5 (lower is better)
Translates to: DTAQSAAHTWRPRSP*SRVCAARATPSGLI
Trigger: GATCAACCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCGCTTTGTGCTGTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504818.5
CDS CCA 90 bp CCCAGAGACTCCTCTTCCAGCCCCAGCACGTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGGGACAGCACCTGGCGCTCACCTCGG +
Preference number: 5 (lower is better)
Translates to: PRDSSSSPSTSTKRH*PATPSRDSTWRSPR
Trigger: CCGAGGTGAGCGCCAGGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGACGTGCTGGGGCTGGAAGAGGAGTCTCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS CCA 90 bp CTGGGCCGTGAGGGGAAACAGCAGCAGCAGCGCGCAGGCAGGCGCTaGCACCGAGCCCAGAGACTCCTCTTCCAGCCCCAGCACGTCCAC +
Preference number: 5 (lower is better)
Translates to: LGREGKQQQQRAGRR*HRAQRLLFQPQHVH
Trigger: GTGGACGTGCTGGGGCTGGAAGAGGAGTCTCTGGGCTCGGTGCCAGCGCCTGCCTGCGCGCTGCTGCTGCTGTTTCCCCTCACGGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000284440.9
ENST00000381760.8
ENST00000472501.5
ENST00000503431.5
ENST00000504818.5
ENST00000505232.5
ENST00000508768.5
ENST00000512419.5
ENST00000512788.1
ENST00000514924.5
CDS CCA 90 bp CCCAGAGACTCCTCTTCCAGCCCCAGCACGTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGGGACAGCACCTGCGGAGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: PRDSSSSPSTSTKRH*PATPSRDSTCGEET
Trigger: TGTCTCCTCTCCGCAGGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGACGTGCTGGGGCTGGAAGAGGAGTCTCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381760.8
ENST00000472501.5
ENST00000504818.5
CDS CCA 90 bp CCCAGAGACTCCTCTTCCAGCCCCAGCACGTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGGGACAGCACTTTGTTCAGCATCTCG +
Preference number: 5 (lower is better)
Translates to: PRDSSSSPSTSTKRH*PATPSRDSTLFSIS
Trigger: CGAGATGCTGAACAAAGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGACGTGCTGGGGCTGGAAGAGGAGTCTCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000505232.5
ENST00000508768.5
ENST00000512788.1
ENST00000514924.5
CDS-3UTR CAA 90 bp CTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAAAGCCGGGACAGCACTTaGTTCAGCATCTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: LAESHGREADFSLLTLGESRDST*FSISGL
Trigger: CAACCCCGAGATGCTGAACAAAGTGCTGTCCCGGCT...TTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505232.5
CDS-3UTR CAA 90 bp TCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTGCGCTCACCTCGGGGTaGATCTCCATCGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SPSEAHTTMAQWTAVHSAALTSG*ISIGLS
Trigger: GCTCAAGCCGATGGAGATCAACCCCGAGGTGAGCGC...AGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS-3UTR CAA 90 bp AGAGCATTAGGCTGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCCTTGTCATCCGACATaGGCCTTCCTGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: RALGCLAESHGREADFSLPCHPT*AFLCHG
Trigger: GCCGTGGCACAGGAAGGCCAATGTCGGATGACAAGG...CAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505232.5
CDS-3UTR CAA 90 bp GCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATTCTTGATCTCCATCGGCTaGAGCTGCATCTTCGCGGAG +
Preference number: 5 (lower is better)
Translates to: AESHGREADFSLLTLGEFLISIG*SCIFAE
Trigger: CTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAA...GAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR CAA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACGTCATCTACCCGACATaGGCCTTCCTGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHVIYPT*AFLCHG
Trigger: GCCGTGGCACAGGAAGGCCAATGTCGGGTAGATGAC...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR CAA 90 bp CTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAAGAAGCGGACTTCTCCTaGCTCACGCTCGGTGAATTC +
Preference number: 5 (lower is better)
Translates to: LAESHGREADFSLLTLGEEADFS*LTLGEF
Trigger: GAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTC...TTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS GCA 90 bp AGCACTTTGTTCAGCATCTCGGGGTTGATCTCCATCGGCTTGAGCTaGATCTTCGCGGAGCGCCCGGCAGAAATAGCCTTGCAGTCTCAC +
Preference number: 5 (lower is better)
Translates to: STLFSISGLISIGLS*IFAERPAEIALQSH
Trigger: GTGAGACTGCAAGGCTATTTCTGCCGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAACCCCGAGATGCTGAACAAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514924.5
CDS-3UTR CAA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACAGCCGGGACAGCACTTaGTTCAGCATCTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHSRDST*FSISGL
Trigger: CAACCCCGAGATGCTGAACAAAGTGCTGTCCCGGCT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
CDS-3UTR CAA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTGTCATCTACCCGACATaGGCCTTCCTGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTVIYPT*AFLCHG
Trigger: GCCGTGGCACAGGAAGGCCAATGTCGGGTAGATGAC...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CAA 90 bp TTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATAGCTGTGCACTCTGCTaGTGCTTAAGTGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LQRATAEKRTSPCSRSVNSCALC*CLSAWV
Trigger: CACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCT...ATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS-3UTR CAA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTTGATCTCCATCGGCTaGAGCTGCATCTTCGCGGAG +
Preference number: 5 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHLISIG*SCIFAE
Trigger: CTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CAA 90 bp CACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTTTCAGCATCTCGGGGTaGATCTCCATCGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: HHLKLTPQWPSGQLCTLLFSISG*ISIGLS
Trigger: GCTCAAGCCGATGGAGATCAACCCCGAGATGCTGAA...AAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284440.9
CDS-3UTR CAA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGAGCCGGGACAGCACTTaGTTCAGCATCTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKSRDST*FSISGL
Trigger: CAACCCCGAGATGCTGAACAAAGTGCTGTCCCGGCT...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284440.9
CDS-3UTR CAA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACGAAGCGGACTTCTCCTaGCTCACGCTCGGTGAATTC +
Preference number: 5 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHEADFS*LTLGEF
Trigger: GAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTC...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CAA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACAGCTGTGCACTCTGCTaGTGCTTAAGTGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHSCALC*CLSAWV
Trigger: CACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR CAA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTTTGATCTCCATCGGCTaGAGCTGCATCTTCGCGGAG +
Preference number: 5 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTLISIG*SCIFAE
Trigger: CTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAA...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CAA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTTGATCTCCATCGGCTaGAGCTGCATCTTCGCGGAG +
Preference number: 5 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKLISIG*SCIFAE
Trigger: CTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAA...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CAA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTAAATCCCAGTTTGTCTaGATTATTGGCCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: CLAESHGREADFSLLTLGKSQFV*IIGHCV
Trigger: CACGCAGTGGCCAATAATCAAGACAAACTGGGATTT...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR CAA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGGAAGCGGACTTCTCCTaGCTCACGCTCGGTGAATTC +
Preference number: 5 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKEADFS*LTLGEF
Trigger: GAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTC...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CAA 90 bp TGCCTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTAAATGGAAATTCACCTaGTCATCCGACATTGGCCTT +
Preference number: 5 (lower is better)
Translates to: CLAESHGREADFSLLTLGKWKFT*SSDIGL
Trigger: AAGGCCAATGTCGGATGACAAGGTGAATTTCCATTT...ACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505232.5
CDS-3UTR CAA 90 bp CTTGCAGAGAGCCACGGCAGAGAAGCGGACTTCTCCTTGCTCACGCTCGGTGAATTTAGGACTAACTTCTaGTCCCTTCAGCTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: LAESHGREADFSLLTLGEFRTNF*SLQLFN
Trigger: ATTGAAGAGCTGAAGGGACAAGAAGTTAGTCCTAAA...TTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505232.5
ENST00000512419.5
CDS-3UTR CAA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACAAATCCCAGTTTGTCTaGATTATTGGCCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHKSQFV*IIGHCV
Trigger: CACGCAGTGGCCAATAATCAAGACAAACTGGGATTT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CAA 90 bp CAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGTGCCTGGGTGTGAAATGGAAATTCACCTaGTCATCTACCCGACATTGG +
Preference number: 5 (lower is better)
Translates to: QWPSGQLCTLLVLKCLGVKWKFT*SSTRHW
Trigger: CCAATGTCGGGTAGATGACAAGGTGAATTTCCATTT...CACACCCAGGCACTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CAA 90 bp AAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTGTGCTTAAGAAATCCCAGTTTGTCTaGATTATTGGCCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: KLTPQWPSGQLCTLLVLKKSQFV*IIGHCV
Trigger: CACGCAGTGGCCAATAATCAAGACAAACTGGGATTT...CTTAAGCACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CAA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACAAATGGAAATTCACCTaGTCATCTACCCGACATTGG +
Preference number: 5 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHKWKFT*SSTRHW
Trigger: CCAATGTCGGGTAGATGACAAGGTGAATTTCCATTT...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000512419.5
CDS-3UTR CAA 90 bp TCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTCTGCTTTTAGGACTAACTTCTaGTCCCTTCAGCTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: SPSEAHTTMAQWTAVHSAFRTNF*SLQLFN
Trigger: ATTGAAGAGCTGAAGGGACAAGAAGTTAGTCCTAAA...AGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS-3UTR CAA 90 bp GGTGTGGCTGAGGGGAAGGCGTGTCTGCAGAACAGAAGAACAGCTGTGTTTCACTTTAGGACTAACTTCTaGTCCCTTCAGCTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: GVAEGKACLQNRRTAVFHFRTNF*SLQLFN
Trigger: ATTGAAGAGCTGAAGGGACAAGAAGTTAGTCCTAAA...GTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTCCCCTCAGCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000508768.5
ENST00000512419.5
CDS-3UTR CAA 90 bp ATGCTTCACCATCTGAAGCTCACACCACAATGGCCCAGTGGACAGCTGTGCACTAAATGGAAATTCACCTaGTCATCTACCCGACATTGG +
Preference number: 5 (lower is better)
Translates to: MLHHLKLTPQWPSGQLCTKWKFT*SSTRHW
Trigger: CCAATGTCGGGTAGATGACAAGGTGAATTTCCATTT...AGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284440.9
ENST00000512419.5
CDS CCA 90 bp GTGGTTGTGGAGACGGGATTTGTTGGTGGGTGTTCCTTGAGTGTATaGAGCAGTCCTTTTGATGGAGTCTTTAATTTTGGGCGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: VVVETGFVGGCSLSV*SSPFDGVFNFGRSF
Trigger: GAAACTTCGCCCAAAATTAAAGACTCCATCAAAAGGACTGCTCCATACACTCAAGGAACACCCACCAACAAATCCCGTCTCCACAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514924.5
CDS TCA 90 bp ATAATCTGGTGGTTGTGGAGACGGGATTTGTTGGTGGGTGTTCCTTaGGTGTATGGAGCAGTCCTTTTGATGGAGTCTTTAATTTTGGGC +
Preference number: 5 (lower is better)
Translates to: IIWWLWRRDLLVGVP*VYGAVLLMESLILG
Trigger: GCCCAAAATTAAAGACTCCATCAAAAGGACTGCTCCATACACTCAAGGAACACCCACCAACAAATCCCGTCTCCACAACCACCAGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514924.5
CDS GCA 90 bp AATAGAAAATTTAGCCAAAGAATTGTGAGGCACATTAAGAAGAGATaGATTCCAAAGATGACCTTCAGCAGGGTGTCCTCTGAACTGGCG +
Preference number: 5 (lower is better)
Translates to: NRKFSQRIVRHIKKR*IPKMTFSRVSSELA
Trigger: CGCCAGTTCAGAGGACACCCTGCTGAAGGTCATCTTTGGAATGCATCTCTTCTTAATGTGCCTCACAATTCTTTGGCTAAATTTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510566.1
CDS GCA 72 bp GCCGTCTCCGGTGCTCGCAGCGGGCGGCTTGGTCCCTaGCAGCAGCCGGAACCGGTGGGCGCCCCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: AVSGARSGRLGP*QQPEPVGAPAS
Trigger: CGAGGCGGGGGCGCCCACCGGTTCCGGCTGCTGGCAGGGACCAAGCCGCCCGCTGCGAGCACCGGAGACGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381760.8
ENST00000472501.5
CDS GCA 72 bp GTGGCGCCCGCGAAGCCCGTGCAGCCGAGTCTGTGCTaGCCGCGCCACGCCCTCGGGAGCTCCGCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: VAPAKPVQPSLC*PRHALGSSAWR
Trigger: GCGCCAGGCGGAGCTCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381760.8
ENST00000472501.5
CDS CCA 72 bp CAGCCCGGCCGTCTCCGGTGCTCGCAGCGGGCGGCTTaGTCCCTGCCAGCAGCCGGAACCGGTGGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: QPGRLRCSQRAA*SLPAAGTGGRP
Trigger: GGGGCGCCCACCGGTTCCGGCTGCTGGCAGGGACCAAGCCGCCCGCTGCGAGCACCGGAGACGGCCGGGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381760.8
ENST00000472501.5
CDS CAA 72 bp CCAGCCCGGCCGTCTCCGGTGCTCGCAGCGGGCGGCTaGGTCCCTGCCAGCAGCCGGAACCGGTGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: PARPSPVLAAGG*VPASSRNRWAP
Trigger: GGGCGCCCACCGGTTCCGGCTGCTGGCAGGGACCAAGCCGCCCGCTGCGAGCACCGGAGACGGCCGGGCTGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381760.8
ENST00000472501.5
CDS GCA 72 bp CACGTGGCGCCCGCGAAGCCCGTGCAGCCGAGTCTGTaGTGCCCGCGCCACGCCCTCGGGAGCTCCGCCTGG +
Preference number: 6 (lower is better)
Translates to: HVAPAKPVQPSL*CPRHALGSSAW
Trigger: CCAGGCGGAGCTCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381760.8
ENST00000472501.5
CDS GCA 72 bp CAAAGCGCGGCCCACACGTGGCGCCCGCGAAGCCCGTaGAGCCGAGTCTGTGCTGCCCGCGCCACGCCCTCG +
Preference number: 6 (lower is better)
Translates to: QSAAHTWRPRSP*SRVCAARATPS
Trigger: CGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCGCTTTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381760.8
ENST00000472501.5
ENST00000504818.5
CDS GCA 72 bp GTGGCGCCCGCGAAGCCCGTGCAGCCGAGTCTGTGCTaGCCGCGCCACGCCCTCGGGGTTGATCTCCATCGG +
Preference number: 6 (lower is better)
Translates to: VAPAKPVQPSLC*PRHALGVDLHR
Trigger: CCGATGGAGATCAACCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504818.5
CDS CCA 72 bp TCCTCTTCCAGCCCCAGCACGTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGGGACAGCACCTGGCGC +
Preference number: 6 (lower is better)
Translates to: SSSSPSTSTKRH*PATPSRDSTWR
Trigger: GCGCCAGGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGACGTGCTGGGGCTGGAAGAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS GCA 72 bp CACGTGGCGCCCGCGAAGCCCGTGCAGCCGAGTCTGTaGTGCCCGCGCCACGCCCTCGGGGTTGATCTCCAT +
Preference number: 6 (lower is better)
Translates to: HVAPAKPVQPSL*CPRHALGVDLH
Trigger: ATGGAGATCAACCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504818.5
CDS CCA 72 bp TCCTCTTCCAGCCCCAGCACGTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGGGACAGCACCTGCGGA +
Preference number: 6 (lower is better)
Translates to: SSSSPSTSTKRH*PATPSRDSTCG
Trigger: TCCGCAGGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGACGTGCTGGGGCTGGAAGAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381760.8
ENST00000472501.5
ENST00000504818.5
CDS CCA 72 bp CGGCGCAATGACACAGCACAAAGCGCGGCCCACACGTaGCGCCCGCGAAGCCCGTGCAGCCGAGTCTGTGCT +
Preference number: 6 (lower is better)
Translates to: RRNDTAQSAAHT*RPRSPCSRVCA
Trigger: AGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCGCTTTGTGCTGTGTCATTGCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381760.8
ENST00000472501.5
ENST00000504818.5
CDS CCA 72 bp TCCTCTTCCAGCCCCAGCACGTCCACGAAGCGCCACTaGCCGGCGACCCCCAGCCGGGACAGCACTTTGTTC +
Preference number: 6 (lower is better)
Translates to: SSSSPSTSTKRH*PATPSRDSTLF
Trigger: GAACAAAGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGACGTGCTGGGGCTGGAAGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000284440.9
ENST00000503431.5
ENST00000505232.5
ENST00000508768.5
ENST00000512788.1
ENST00000514924.5
CDS CAA 72 bp CCCCAGCCGGGACAGCACCTGGCGCTCACCTCGGGGTaGATCTCCATCGGCTTGAGCTGCATCTTCGCGGAG +
Preference number: 6 (lower is better)
Translates to: PQPGQHLALTSG*ISIGLSCIFAE
Trigger: CTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAACCCCGAGGTGAGCGCCAGGTGCTGTCCCGGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS CAA 72 bp CACCTGGCGCTCACCTCGGGGTTGATCTCCATCGGCTaGAGCTGCATCTTCGCGGAGCGCCCGGCAGAAATA +
Preference number: 6 (lower is better)
Translates to: HLALTSGLISIG*SCIFAERPAEI
Trigger: TATTTCTGCCGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAACCCCGAGGTGAGCGCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512419.5
CDS GCA 72 bp TTCAGCATCTCGGGGTTGATCTCCATCGGCTTGAGCTaGATCTTCGCGGAGCGCCCGGCAGAAATAGCCCCC +
Preference number: 6 (lower is better)
Translates to: FSISGLISIGLS*IFAERPAEIAP
Trigger: GGGGGCTATTTCTGCCGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAACCCCGAGATGCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503431.5
CDS CAA 72 bp CATCTGGCGCTCACCTCGGGGTTGATCTCCATCGGCTaGAGCTGCATCTTCGCGGAGCGCCCGGCAGAAATA +
Preference number: 6 (lower is better)
Translates to: HLALTSGLISIG*SCIFAERPAEI
Trigger: TATTTCTGCCGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAACCCCGAGGTGAGCGCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472501.5
CDS GCA 72 bp TTCAGCATCTCGGGGTTGATCTCCATCGGCTTGAGCTaGATCTTCGCGGAGCGCCCGGCAGAAATAGCCTTG +
Preference number: 6 (lower is better)
Translates to: FSISGLISIGLS*IFAERPAEIAL
Trigger: CAAGGCTATTTCTGCCGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAACCCCGAGATGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514924.5
CDS CAA 72 bp ACTTTGTTCAGCATCTCGGGGTTGATCTCCATCGGCTaGAGCTGCATCTTCGCGGAGCGCCCGGCAGAAATA +
Preference number: 6 (lower is better)
Translates to: TLFSISGLISIG*SCIFAERPAEI
Trigger: TATTTCTGCCGGGCGCTCCGCGAAGATGCAGCTCAAGCCGATGGAGATCAACCCCGAGATGCTGAACAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284440.9
ENST00000381760.8
ENST00000503431.5
ENST00000505232.5
ENST00000508768.5
ENST00000512788.1
ENST00000514924.5
CDS CCA 72 bp AGCCTTGCAGTCTCACTCGCCGGTGAGATAATCTGGTaGTTGTGGAGACGGGATTTGTTGGTGGGTGTTCCT +
Preference number: 6 (lower is better)
Translates to: SLAVSLAGEIIW*LWRRDLLVGVP
Trigger: AGGAACACCCACCAACAAATCCCGTCTCCACAACCACCAGATTATCTCACCGGCGAGTGAGACTGCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514924.5
CDS TCA 72 bp ATGCATTCCAAAGATGACCTTCAGCAGGGTGTCCTCTaGACTGGCGCCATGGTTCACCGGAAAAGGCATTCG +
Preference number: 6 (lower is better)
Translates to: MHSKDDLQQGVL*TGAMVHRKRHS
Trigger: CGAATGCCTTTTCCGGTGAACCATGGCGCCAGTTCAGAGGACACCCTGCTGAAGGTCATCTTTGGAATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510566.1
ENST00000512788.1
CDS CCA 72 bp AATAGCCTTGCAGTCTCACTCGCCGGTGAGATAATCTaGTGGTTGTGGAGACGGGATTTGTTGGTGGGTGTT +
Preference number: 6 (lower is better)
Translates to: NSLAVSLAGEII*WLWRRDLLVGV
Trigger: AACACCCACCAACAAATCCCGTCTCCACAACCACCAGATTATCTCACCGGCGAGTGAGACTGCAAGGCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514924.5
CDS GCA 72 bp TTCTCTGCAGACCTTGGCAGCGTCATTAAGAAGAGATaGATTCCAAAGATGACCTTCAGCAGGGTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: FSADLGSVIKKR*IPKMTFSRVSS
Trigger: AGAGGACACCCTGCTGAAGGTCATCTTTGGAATGCATCTCTTCTTAATGACGCTGCCAAGGTCTGCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512788.1
CDS CAA 72 bp GTGGTTGTGGAGACGGGATTTGTTGGTGGGTGTTCCTaGAGTGTATGGAGCAGTCCTTTTGATGGAGTCTTT +
Preference number: 6 (lower is better)
Translates to: VVVETGFVGGCS*SVWSSPFDGVF
Trigger: AAAGACTCCATCAAAAGGACTGCTCCATACACTCAAGGAACACCCACCAACAAATCCCGTCTCCACAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514924.5
CDS TCA 72 bp TGGTTGTGGAGACGGGATTTGTTGGTGGGTGTTCCTTaGGTGTATGGAGCAGTCCTTTTGATGGAGTCTTTA +
Preference number: 6 (lower is better)
Translates to: WLWRRDLLVGVP*VYGAVLLMESL
Trigger: TAAAGACTCCATCAAAAGGACTGCTCCATACACTCAAGGAACACCCACCAACAAATCCCGTCTCCACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514924.5
CDS CAA 90 bp GATAATCTGGTGGTTGTGGAGACGGGATTTGTTGGTGGGTGTTCCTaGAGTGTATGGAGCAGTCCTTTTGATGGAGTCTTTAATTTTGGG +
Preference number: 6 (lower is better)
Translates to: DNLVVVETGFVGGCS*SVWSSPFDGVFNFG
Trigger: CCCAAAATTAAAGACTCCATCAAAAGGACTGCTCCATACACTCAAGGAACACCCACCAACAAATCCCGTCTCCACAACCACCAGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514924.5