RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBXN7 (Homo sapiens)

Ensembl gene IDs: ENSG00000163960

Ensembl transcript IDs: ENST00000296328.9, ENST00000381887.7, ENST00000413584.1, ENST00000428095.1, ENST00000429160.1, ENST00000493566.1

Found 501 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGGCATCTCCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTaGTTTGTGGCTGTTCCAGGATCAGTTCTGACTGGTGGCTCAGTC +
Preference number: 1 (lower is better)
Translates to: GGISSISESTAGNPW*FVAVPGSVLTGGSV
Trigger: GACTGAGCCACCAGTCAGAACTGATCCTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGGAGATGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CCA 90 bp TGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGGATCAGTTCTGACTaGTGGCTCAGTCAGCGGCCTTCTATTCTCCTCTTTTCTATGCCC +
Preference number: 1 (lower is better)
Translates to: WQSLVVCGCSRISSD*WLSQRPSILLFSMP
Trigger: GGGCATAGAAAAGAGGAGAATAGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGATCCTGGAACAGCCACAAACCACCAAGGATTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CCA 90 bp TCAGGTGGCATCTCCAGTATCTCTGAATCCACAGCTGGCAATCCTTaGTGGTTTGTGGCTGTTCCAGGATCAGTTCTGACTGGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: SGGISSISESTAGNP*WFVAVPGSVLTGGS
Trigger: TGAGCCACCAGTCAGAACTGATCCTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGGAGATGCCACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 90 bp CCAGCTGCCCCTTGCTCAACAATCCCAAAGACTTCTTCCCACCACTaGGAAGAGCTGCAGAAATCAACGGTATCTCCTAGCACCATTGGA +
Preference number: 1 (lower is better)
Translates to: PAAPCSTIPKTSSHH*EELQKSTVSPSTIG
Trigger: TCCAATGGTGCTAGGAGATACCGTTGATTTCTGCAGCTCTTCTCAGTGGTGGGAAGAAGTCTTTGGGATTGTTGAGCAAGGGGCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 90 bp ATCAGAGGTTTCCTTGAGTTTGGTCCCTCTCTCAGCACAGTGAGCTaGTGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCA +
Preference number: 1 (lower is better)
Translates to: IRGFLEFGPSLSTVS*CLQKTYRPTPFPPP
Trigger: TGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACTGTGCTGAGAGAGGGACCAAACTCAAGGAAACCTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 90 bp CAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGGATCAGTTCTaGCTGGTGGCTCAGTCAGCGGCCTTCTATTCTCCTCTTTTCTAT +
Preference number: 1 (lower is better)
Translates to: QLAILGGLWLFQDQF*LVAQSAAFYSPLFY
Trigger: ATAGAAAAGAGGAGAATAGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGATCCTGGAACAGCCACAAACCACCAAGGATTGCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 90 bp CTCCACTACTCCATCTGCTTTTTCAGGTGGCATCTCCAGTATCTCTaGATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGG +
Preference number: 1 (lower is better)
Translates to: LHYSICFFRWHLQYL*IHSWQSLVVCGCSR
Trigger: CCTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGGAGATGCCACCTGAAAAAGCAGATGGAGTAGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CCA 90 bp CAATCCTTGGTGGTTTGTGGCTGTTCCAGGATCAGTTCTGACTGGTaGCTCAGTCAGCGGCCTTCTATTCTCCTCTTTTCTATGCCCCAA +
Preference number: 1 (lower is better)
Translates to: QSLVVCGCSRISSDW*LSQRPSILLFSMPQ
Trigger: TTGGGGCATAGAAAAGAGGAGAATAGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGATCCTGGAACAGCCACAAACCACCAAGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 90 bp CAGCTTTACTGTTTCCTGGCAAGTGTTTTCAACAGCCTTTCCAGCTaGAGGGACGAACCCAGGAAAGTAACAAGGCCCAAGACCCCACAT +
Preference number: 1 (lower is better)
Translates to: QLYCFLASVFNSLSS*RDEPRKVTRPKTPH
Trigger: ATGTGGGGTCTTGGGCCTTGTTACTTTCCTGGGTTCGTCCCTTCAGCTGGAAAGGCTGTTGAAAACACTTGCCAGGAAACAGTAAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 90 bp TATGACTTTGCTGGAGTACAGATGGGTGCCATCAGAGCACAAAGCTaGGCAAACCTCTCTTCTTACCCTGTGCCCTCCCTGAATTTTTGG +
Preference number: 1 (lower is better)
Translates to: YDFAGVQMGAIRAQS*ANLSSYPVPSLNFW
Trigger: CCAAAAATTCAGGGAGGGCACAGGGTAAGAAGAGAGGTTTGCTCAGCTTTGTGCTCTGATGGCACCCATCTGTACTCCAGCAAAGTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 90 bp CTTGCTCAACAATCCCAAAGACTTCTTCCCACCACTGAGAAGAGCTaGAGAAATCAACGGTATCTCCTAGCACCATTGGAGAAAAGGCCC +
Preference number: 1 (lower is better)
Translates to: LAQQSQRLLPTTEKS*RNQRYLLAPLEKRP
Trigger: GGGCCTTTTCTCCAATGGTGCTAGGAGATACCGTTGATTTCTGCAGCTCTTCTCAGTGGTGGGAAGAAGTCTTTGGGATTGTTGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 90 bp TATAGATCAGAGGTTTCCTTGAGTTTGGTCCCTCTCTCAGCACAGTaGGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTC +
Preference number: 1 (lower is better)
Translates to: YRSEVSLSLVPLSAQ*ADVFKRLIVPLPSL
Trigger: GAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACTGTGCTGAGAGAGGGACCAAACTCAAGGAAACCTCTGATCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 90 bp AGCCGAACTCATACAAAGCATGCACAGAGCCTGCACAGACACTGCTaGGAGTTTCCAGGGAACAATCAATACCTACTCGAAAAAGGACTT +
Preference number: 1 (lower is better)
Translates to: SRTHTKHAQSLHRHC*EFPGNNQYLLEKGL
Trigger: AAGTCCTTTTTCGAGTAGGTATTGATTGTTCCCTGGAAACTCTCAGCAGTGTCTGTGCAGGCTCTGTGCATGCTTTGTATGAGTTCGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 90 bp ATCAATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATaGATTGTTCAAGCCGAACTCATACAAAGCATGCACAGAGCCTGC +
Preference number: 1 (lower is better)
Translates to: INEDMPELDIPGDFK*IVQAELIQSMHRAC
Trigger: GCAGGCTCTGTGCATGCTTTGTATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 90 bp TTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTCAGACAATaGAGGGCTCCAAAGGAACTAATATGCTGTGCTGGCAAAAATAGC +
Preference number: 1 (lower is better)
Translates to: LLTSCLPTDHCRLRQ*RAPKELICCAGKNS
Trigger: GCTATTTTTGCCAGCACAGCATATTAGTTCCTTTGGAGCCCTCCATTGTCTGAGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR CCA 90 bp GTCAGCGGCCTTCTATTCTCCTCTTTTCTATGCCCCAAATCTTTGTaGGGAGACTTTCTGGACTTGGCAAGATTCTCTACCTCTTCTTCT +
Preference number: 1 (lower is better)
Translates to: VSGLLFSSFLCPKSL*GDFLDLARFSTSSS
Trigger: AGAAGAAGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAAAGAGGAGAATAGAAGGCCGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR GCA 90 bp AAATGCATTGTTCAAGCCGAACTCATACAAAGCATGCACAGAGCCTaGACAGACACTGCTGAGAGTTTCCAGGGAACAATCAATACCTAC +
Preference number: 1 (lower is better)
Translates to: KCIVQAELIQSMHRA*TDTAESFQGTINTY
Trigger: GTAGGTATTGATTGTTCCCTGGAAACTCTCAGCAGTGTCTGTGCAGGCTCTGTGCATGCTTTGTATGAGTTCGGCTTGAACAATGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 90 bp GAAAGTCCATCCAGTTGTCCATGTTCACCCAGAAATCCCGTCACTTaGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGC +
Preference number: 1 (lower is better)
Translates to: ESPSSCPCSPRNPVT*SKKEDTSNWCHSTS
Trigger: GCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAGTGACGGGATTTCTGGGTGAACATGGACAACTGGATGGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 90 bp AAACCTCTCTTCTTACCCTGTGCCCTCCCTGAATTTTTGGATTTCTaGGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCT +
Preference number: 1 (lower is better)
Translates to: KPLFLPCALPEFLDF*ACLLPTNVLPSSAP
Trigger: AGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCCAAAAATTCAGGGAGGGCACAGGGTAAGAAGAGAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 90 bp CAGCTGTCTTTAGCCTATTCATCAAGGCTGGTATTACCGGAAAACTaGCATGTTCACCAGAAGAGCTGTCTCTTCCTATGCTCATTACAT +
Preference number: 1 (lower is better)
Translates to: QLSLAYSSRLVLPEN*HVHQKSCLFLCSLH
Trigger: ATGTAATGAGCATAGGAAGAGACAGCTCTTCTGGTGAACATGGCAGTTTTCCGGTAATACCAGCCTTGATGAATAGGCTAAAGACAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 90 bp GCAATTTTAAGCAACACAACAGCAACTGGTAGGCCACAAAGAGGGTaGGGTATCACAGAGCTAGCCATTCTCTATATGAAACCAGAGAAT +
Preference number: 1 (lower is better)
Translates to: AILSNTTATGRPQRG*GITELAILYMKPEN
Trigger: ATTCTCTGGTTTCATATAGAGAATGGCTAGCTCTGTGATACCCCACCCTCTTTGTGGCCTACCAGTTGCTGTTGTGTTGCTTAAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 90 bp TCTATATCTAAGACTAGAAGATTCTCTCACAGCTTTACTGTTTCCTaGCAAGTGTTTTCAACAGCCTTTCCAGCTGAAGGGACGAACCCA +
Preference number: 1 (lower is better)
Translates to: SISKTRRFSHSFTVS*QVFSTAFPAEGTNP
Trigger: TGGGTTCGTCCCTTCAGCTGGAAAGGCTGTTGAAAACACTTGCCAGGAAACAGTAAAGCTGTGAGAGAATCTTCTAGTCTTAGATATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 90 bp CAGTTTAGCTTGCTCTGGAAGAGTGATCTGTTCCCTTTTTCCATCTaGATACCGCAACATCAGCTGTGCTTTTGGTCCATTTACATCTAT +
Preference number: 1 (lower is better)
Translates to: QFSLLWKSDLFPFSI*IPQHQLCFWSIYIY
Trigger: ATAGATGTAAATGGACCAAAAGCACAGCTGATGTTGCGGTATCCAGATGGAAAAAGGGAACAGATCACTCTTCCAGAGCAAGCTAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 90 bp AAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAAGGTaGCTTGCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAA +
Preference number: 1 (lower is better)
Translates to: KETDYRRDQEIREGR*LACPTLALWSYEPK
Trigger: TTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGCAAGTCACCTTCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR TCA 90 bp AGTAAGGCAAACTGGAAGAAGCATACTGTCAGCGGATTAAATTCTTaGGCAAGGCAATACTCCTTATGGATTCTTCCCATGTACAATCCG +
Preference number: 1 (lower is better)
Translates to: SKANWKKHTVSGLNS*ARQYSLWILPMYNP
Trigger: CGGATTGTACATGGGAAGAATCCATAAGGAGTATTGCCTTGCTCAAGAATTTAATCCGCTGACAGTATGCTTCTTCCAGTTTGCCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 90 bp AGATTTAAAAACATACACACAGAGGGTTCAATAATCTGGTATGGATaGGACACAGAAAACAGAATTGTAGATCGGGCGCAGTGGCTCATG +
Preference number: 1 (lower is better)
Translates to: RFKNIHTEGSIIWYG*DTENRIVDRAQWLM
Trigger: CATGAGCCACTGCGCCCGATCTACAATTCTGTTTTCTGTGTCCCATCCATACCAGATTATTGAACCCTCTGTGTGTATGTTTTTAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 90 bp TTTACTCCAGGGATCAATAATCCTTTCCTACTTGGGTACTGGTTATaGCTTAGTGGCAGAACTTCATGCCCCAAATCTAGAAGTTACAAA +
Preference number: 1 (lower is better)
Translates to: FTPGINNPFLLGYWL*LSGRTSCPKSRSYK
Trigger: TTTGTAACTTCTAGATTTGGGGCATGAAGTTCTGCCACTAAGGCATAACCAGTACCCAAGTAGGAAAGGATTATTGATCCCTGGAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 90 bp GAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTaGCAGTATACAGCTCTATTTTTCAAACGGCAAGTATGTTATCCA +
Preference number: 1 (lower is better)
Translates to: ELVYYQQMFYPPVHL*QYTALFFKRQVCYP
Trigger: TGGATAACATACTTGCCGTTTGAAAAATAGAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTaGACCTTTGACAGTATACAGCTCTATTTTTCAAACGGCAAGTAT +
Preference number: 1 (lower is better)
Translates to: GFLSLSTTNKCFTLQ*TFDSIQLYFSNGKY
Trigger: ATACTTGCCGTTTGAAAAATAGAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 90 bp ACCCACCACATCTTGTATTGTAGACATCCCAGCTGCATGTTAAGCTaGGTGAAAGTACCATGCTGTCTTTTAAATCACTTTATATCTACT +
Preference number: 1 (lower is better)
Translates to: THHILYCRHPSCMLS*VKVPCCLLNHFIST
Trigger: AGTAGATATAAAGTGATTTAAAAGACAGCATGGTACTTTCACTCAGCTTAACATGCAGCTGGGATGTCTACAATACAAGATGTGGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 90 bp CAGGAGAAACCGATATATTGGTATGGTATTCTCTGTTGGGTTATCTaGAGTTCTAAAGAACATTCTTGCCACTATTCTAAAATGTGTACA +
Preference number: 1 (lower is better)
Translates to: QEKPIYWYGILCWVI*SSKEHSCHYSKMCT
Trigger: TGTACACATTTTAGAATAGTGGCAAGAATGTTCTTTAGAACTGCAGATAACCCAACAGAGAATACCATACCAATATATCGGTTTCTCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 90 bp AAGCTCAAAATACGAAATGAGCATAGGGTGAAGTTGATGTGTAAATaGTATTCTACAGATTCAAGATGGCCTCTTCTAAAAACACTGAAG +
Preference number: 1 (lower is better)
Translates to: KLKIRNEHRVKLMCK*YSTDSRWPLLKTLK
Trigger: CTTCAGTGTTTTTAGAAGAGGCCATCTTGAATCTGTAGAATACCATTTACACATCAACTTCACCCTATGCTCATTTCGTATTTTGAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR CCA 90 bp ACGATTCTTCGGGAGATTGAAGAGGCAAATGTACACAAAAGTATCTaGTGCATGCCAATTAGTATTAAGTTTCCTGTTCTTTTCTCATTT +
Preference number: 1 (lower is better)
Translates to: TILREIEEANVHKSI*CMPISIKFPVLFSF
Trigger: AAATGAGAAAAGAACAGGAAACTTAATACTAATTGGCATGCACCAGATACTTTTGTGTACATTTGCCTCTTCAATCTCCCGAAGAATCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAATCTCCTGACCTTAGGTaGTCTGCCCACCTCCGCCTC +
Preference number: 2 (lower is better)
Translates to: LLQTARHPAECKQSNVIKSPDLR*SAHLRL
Trigger: GAGGCGGAGGTGGGCAGATCACCTAAGGTCAGGAGA...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACTTCCAGGATCAGTTCTaGCTGGTGGCTCAGTCAGCG +
Preference number: 2 (lower is better)
Translates to: ACPTLALWSYEPKCILSDFQDQF*LVAQSA
Trigger: CGCTGACTGAGCCACCAGTCAGAACTGATCCTGGAA...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTATCAGTTCTGACTGGTaGCTCAGTCAGCGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGISSDW*LSQRPS
Trigger: AGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGAT...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp GCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTCACTTAGGATCAGTTCTGACTaGTGGCTCAGTCAGCGGCCT +
Preference number: 2 (lower is better)
Translates to: AGKNSKHLPIPVTTIGSLRISSD*WLSQRP
Trigger: AGGCCGCTGACTGAGCCACCAGTCAGAACTGATCCT...AAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCCCTATTCATCAAGGCTaGTATTACCGGAAAACTGCC +
Preference number: 2 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTPIHQG*YYRKTA
Trigger: GGCAGTTTTCCGGTAATACCAGCCTTGATGAATAGG...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp CCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGTGCCCCAAATCTTTGTaGGGAGACTTTCTGGACTTG +
Preference number: 2 (lower is better)
Translates to: PVSLNPQLAILGGLWLFQCPKSL*GDFLDL
Trigger: CAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCA...CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp CCCGTCACTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTCCACACATCGCGGTTaGGGCACTGACATGCAAAGT +
Preference number: 2 (lower is better)
Translates to: PVTWSKKEDTSNWCHSTSSTHRG*GTDMQS
Trigger: ACTTTGCATGTCAGTGCCTCAACCGCGATGTGTGGA...GCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAGTGACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CAA 90 bp ATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATGCATaGTTCAAGCCGAACTCATACAAAGCATGCACAGAGCCTGCACAG +
Preference number: 2 (lower is better)
Translates to: MKTCQNWTSQVTSNA*FKPNSYKACTEPAQ
Trigger: CTGTGCAGGCTCTGTGCATGCTTTGTATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCATACCTAAGTATGCCTaGAACAACACAGGACAATCA +
Preference number: 2 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTIPKYA*NNTGQS
Trigger: TGATTGTCCTGTGTTGTTTCAGGCATACTTAGGTAT...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATAACCCTGTGCCCTCCCTaGATTTTTGGATTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: PELDIPGDFKCIVQAELITLCPP*IFGFLS
Trigger: GCTCAGAAATCCAAAAATTCAGGGAGGGCACAGGGT...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCCTTCATGTCCATTCTTaGACTAGCAGGATCAATACA +
Preference number: 2 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTLHVHS*TSRINT
Trigger: TGTATTGATCCTGCTAGTCCAAGAATGGACATGAAG...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTCTTCTGACCTGTCCGTaGGTCCAATATGGAAACATA +
Preference number: 2 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGLLTCP*VQYGNI
Trigger: TATGTTTCCATATTGGACCCACGGACAGGTCAGAAG...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CAA 90 bp CAGAGCCCTATAGGAAAAATGATTGACTTCACACGTTTGAGCGATTaGGGCTTCAGCTATGACTTTGCTGGAGTACAGATGGGTGCCATC +
Preference number: 2 (lower is better)
Translates to: QSPIGKMIDFTRLSD*GFSYDFAGVQMGAI
Trigger: GATGGCACCCATCTGTACTCCAGCAAAGTCATAGCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAATCATTTTTCCTATAGGGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAACTTGTAAGGAGGCTCTaGTGGCAGCTTCTAGCTGGC +
Preference number: 2 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKLVRRL*WQLLAG
Trigger: GCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACAAG...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR GCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCCTTCCTACAGATCACTaGAGACTCAGACAATGGAGG +
Preference number: 2 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPLPTDH*RLRQWR
Trigger: CCTCCATTGTCTGAGTCTGCAGTGATCTGTAGGAAG...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCTTGCTTGCCCAACTTTaGCTCTGTGGTCCTATGAGC +
Preference number: 2 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFLLAQL*LCGPMS
Trigger: GCTCATAGGACCACAGAGCCAAAGTTGGGCAAGCAA...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTATGCATCAAATCAATaGGTGGCCGGAATAGATCTG +
Preference number: 2 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGYASNQ*VAGIDL
Trigger: CAGATCTATTCCGGCCACCCATTGATTTGATGCATA...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCTTTGGGCTTCAGCTATaGCTTTGCTGGAGTACAGAT +
Preference number: 2 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPFGLQL*LCWSTD
Trigger: ATCTGTACTCCAGCAAAGTCATAGCTGAAGCCCAAA...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCAGCCACAAACGGATATaGACTCCTCACTGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFSHKRI*TPHCQK
Trigger: TTTCTGGCAGTGAGGAGTTCATATCCGTTTGTGGCT...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCCATCTCCAGTATCTCTaGATCCACAGCTGGCAATCC +
Preference number: 2 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSHLQYL*IHSWQS
Trigger: GGATTGCCAGCTGTGGATTCAGAGATACTGGAGATG...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR GCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTCTCCACTACTCCATCTaGTTTTTCAGGTGGCATCTC +
Preference number: 2 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTLHYSI*FFRWHL
Trigger: GAGATGCCACCTGAAAAAGCAGATGGAGTAGTGGAG...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR GCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCGGGTATCCTTTAGACTaGACGTGCTTCACCAAAGCT +
Preference number: 2 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFGYPLD*TCFTKA
Trigger: AGCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCC...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTCCAACTTTGGCTCTGTaGTCCTATGAGCCAAAATGC +
Preference number: 2 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSPTLAL*SYEPKC
Trigger: GCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGG...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCGTACACAAAAGTATCTaGTGCATGCCAATTAGTATT +
Preference number: 2 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTVHKSI*CMPISI
Trigger: AATACTAATTGGCATGCACCAGATACTTTTGTGTAC...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTTCCGTGGGTCCAATATaGAAACATAGGGGAAATCCC +
Preference number: 2 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSSVGPI*KHRGNP
Trigger: GGGATTTCCCCTATGTTTCCATATTGGACCCACGGA...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAGCTGGCAATCCTTGGTaGTTTGTGGCTGTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKAGNPW*FVAVPG
Trigger: TCCTGGAACAGCCACAAACCACCAAGGATTGCCAGC...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCACAGCTGGCAATCCTTaGTGGTTTGTGGCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSTAGNP*WFVAVP
Trigger: TGGAACAGCCACAAACCACCAAGGATTGCCAGCTGT...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CAA 90 bp CCACACATCGCGGTTGAGGCACTGACATGCAAAGTCTTGAACATTTaGAATGTTTATCATCAGCCACTTATTTTGCATCTGGCCACACTC +
Preference number: 2 (lower is better)
Translates to: PHIAVEALTCKVLNI*NVYHQPLILHLATL
Trigger: GAGTGTGGCCAGATGCAAAATAAGTGGCTGATGATAAACATTCAAAATGTTCAAGACTTTGCATGTCAGTGCCTCAACCGCGATGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAACTCAGGTTAGGACAATaGAAGTCACCCCATGCTATA +
Preference number: 2 (lower is better)
Translates to: LLQTARHPAECKQSNVIKLRLGQ*KSPHAI
Trigger: TATAGCATGGGGTGACTTTCATTGTCCTAACCTGAG...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAATCTTCTGAATGGAGTTaGAAGGTCTTCCCCTTAGAG +
Preference number: 2 (lower is better)
Translates to: LLQTARHPAECKQSNVIKSSEWS*KVFPLE
Trigger: CTCTAAGGGGAAGACCTTTCAACTCCATTCAGAAGA...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR GCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAAGAAGGAAGGTGACTTaGTTGCCCAACTTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGRRKVT*LPNFGS
Trigger: AGAGCCAAAGTTGGGCAAGCAAGTCACCTTCCTTCT...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR GCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCAGAAGGAAGGTGACTTaGTTGCCCAACTTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSRRKVT*LPNFGS
Trigger: AGAGCCAAAGTTGGGCAAGCAAGTCACCTTCCTTCT...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR GCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACCCAAAGGAACTAATATaGTGTGCTGGCAAAAATAGC +
Preference number: 2 (lower is better)
Translates to: ACPTLALWSYEPKCILSDPKELI*CAGKNS
Trigger: GCTATTTTTGCCAGCACAGCATATTAGTTCCTTTGG...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR GCA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATACCCCTACTAGAAGCTTaGTACTCGTTAACTGAAAAG +
Preference number: 2 (lower is better)
Translates to: PELDIPGDFKCIVQAELIPLLEA*YSLTEK
Trigger: CTTTTCAGTTAACGAGTAGCAAGCTTCTAGTAGGGG...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR GCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTAGTGGATGGTCCAGCTaGCCCTTGCTCAACAATCCC +
Preference number: 2 (lower is better)
Translates to: SKILLLEIITYRLGRSIGSGWSS*PLLNNP
Trigger: GGGATTGTTGAGCAAGGGGCAGCTGGACCATCCACT...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR GCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCGCTAGCAGTTTAGCTTaGTCTGGAAGAGTGATCTGT +
Preference number: 2 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFASSLA*SGRVIC
Trigger: ACAGATCACTCTTCCAGAGCAAGCTAAACTGCTAGC...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp ACACAATCAATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATGCACCACAGCATGGACTCTaGATTCCAATTCTGATTTGC +
Preference number: 2 (lower is better)
Translates to: TQSMKTCQNWTSQVTSNAPQHGL*IPILIC
Trigger: GCAAATCAGAATTGGAATCCAGAGTCCATGCTGTGG...TGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAATTCCTACTTGGGTACTaGTTATGCCTTAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: LLQTARHPAECKQSNVIKFLLGY*LCLSGR
Trigger: TCTGCCACTAAGGCATAACCAGTACCCAAGTAGGAA...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCAGCGACATTTCCACATaGAGAACACAACAAAACCAA +
Preference number: 2 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPSDIST*RTQQNQ
Trigger: TTGGTTTTGTTGTGTTCTTCATGTGGAAATGTCGCT...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTTTGACTTCACACGTTTaGGCGATTTGGGCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRLTSHV*AIWASA
Trigger: AGCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAA...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR GCA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTTCAAAGCTGCCTTTATaGATCAAATCAATGGGTGGC +
Preference number: 2 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSSKLPL*IKSMGG
Trigger: GCCACCCATTGATTTGATGCATAAAGGCAGCTTTGA...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR GCA 90 bp GATAATATTCTTCACAGCTTCGTTGCTCCACACATCGCGGTTGAGGCACTGACATGGCTGTTTCAAAGCTaGCTTTATGCATCAAATCAA +
Preference number: 2 (lower is better)
Translates to: DNILHSFVAPHIAVEALTWLFQS*LYASNQ
Trigger: TTGATTTGATGCATAAAGGCAGCTTTGAAACAGCCA...TGTCAGTGCCTCAACCGCGATGTGTGGAGCAACGAAGCTGTGAAGAATATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR GCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCCCGCAACATCAGCTGTaGTTTTGGTCCATTTACATC +
Preference number: 2 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSPQHQL*FWSIYI
Trigger: GATGTAAATGGACCAAAAGCACAGCTGATGTTGCGG...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATTGCTTGCCCAACTTTaGCTCTGTGGTCCTATGAGC +
Preference number: 2 (lower is better)
Translates to: TKGEKETDYRRDQEIREGLLAQL*LCGPMS
Trigger: GCTCATAGGACCACAGAGCCAAAGTTGGGCAAGCAA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTCAAGAGACCACTTACTaGAACACACAATTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFQETTY*NTQFLL
Trigger: CAGCAGGAATTGTGTGTTCCAGTAAGTGGTCTCTTG...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTCTTTGTCGCCCAGGCTaGAGTGTAATGGTGCGATCT +
Preference number: 2 (lower is better)
Translates to: HQLVLISLYLRLEDSLTALCRPG*SVMVRS
Trigger: AGATCGCACCATTACACTCCAGCCTGGGCGACAAAG...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAAGTGTGTCTCTCTAACTaGATAAAACAGGCAGGAATC +
Preference number: 2 (lower is better)
Translates to: LLQTARHPAECKQSNVIKVCLSN*IKQAGI
Trigger: GATTCCTGCCTGTTTTATCCAGTTAGAGAGACACAC...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAATCTGGCCACACTCTTTaGCTGTTTCAAAGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKSGHTL*LFQSCL
Trigger: AAGGCAGCTTTGAAACAGCCAAAGAGTGTGGCCAGA...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCCACTTATTTTGCATCTaGCCACACTCTTTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFHLFCI*PHSLAV
Trigger: AACAGCCAAAGAGTGTGGCCAGATGCAAAATAAGTG...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACTTCAAAACGTTCATTTaGGTATCCTTTAGACTGCAC +
Preference number: 2 (lower is better)
Translates to: ACPTLALWSYEPKCILSDFKTFI*VSFRLH
Trigger: GTGCAGTCTAAAGGATACCCAAATGAACGTTTTGAA...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CAA 90 bp AAAAGGAAACAGAGCCCTATAGGAAAAATGATTGACTTCACACGTTaGAGCGATTTGGGCTTCAGCTATGACTTTGCTGGAGTACAGATG +
Preference number: 2 (lower is better)
Translates to: KRKQSPIGKMIDFTR*SDLGFSYDFAGVQM
Trigger: CATCTGTACTCCAGCAAAGTCATAGCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAATCATTTTTCCTATAGGGCTCTGTTTCCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 90 bp TTCGTTGCTCCACACATCGCGGTTGAGGCACTGACATGCAAAGTCTaGAACATTTTGAATGTTTATCATCAGCCACTTATTTTGCATCTG +
Preference number: 2 (lower is better)
Translates to: FVAPHIAVEALTCKV*NILNVYHQPLILHL
Trigger: CAGATGCAAAATAAGTGGCTGATGATAAACATTCAAAATGTTCAAGACTTTGCATGTCAGTGCCTCAACCGCGATGTGTGGAGCAACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAATAAGAGAAGGAAGGTaGCTTGCTTGCCCAACTTTG +
Preference number: 2 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKIREGR*LACPTL
Trigger: CAAAGTTGGGCAAGCAAGTCACCTTCCTTCTCTTAT...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR TCA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTAGCGACATTTCCACATaGAGAACACAACAAAACCAA +
Preference number: 2 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSSDIST*RTQQNQ
Trigger: TTGGTTTTGTTGTGTTCTTCATGTGGAAATGTCGCT...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCAGCCATTGTACTACATaGTTATTGACCAGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLSHCTT*LLTSCL
Trigger: AAGGCAGCTGGTCAATAATCATGTAGTACAATGGCT...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCAAAGCCCAAGACATCTaGAAATTACTAGTAACCTCC +
Preference number: 2 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFKAQDI*KLLVTS
Trigger: GGAGGTTACTAGTAATTTTCAGATGTCTTGGGCTTT...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR TCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTTCTCTACGCAACATCTaGGGAACATACGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: SKILLLEIITYRLGRSIGSLRNI*GTYAPQ
Trigger: CTGAGGAGCGTATGTTCCTCAGATGTTGCGTAGAGA...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCTATAGGAAAAATGATTaGCTTCACACGTTTGAGCGA +
Preference number: 2 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPYRKND*LHTFER
Trigger: TCGCTCAAACGTGTGAAGTCAATCATTTTTCCTATA...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR GCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTTGGAGTACAGATGGGTaGCATCAGAGCACAAAGCTG +
Preference number: 2 (lower is better)
Translates to: SKILLLEIITYRLGRSIGWSTDG*HQSTKL
Trigger: CAGCTTTGTGCTCTGATGGCACCCATCTGTACTCCA...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACCAACTTTGGCTCTGTaGTCCTATGAGCCAAAATGC +
Preference number: 2 (lower is better)
Translates to: TKGEKETDYRRDQEIREGPTLAL*SYEPKC
Trigger: GCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAGAGACTTTCTGGACTTaGCAAGATTCTCTACCTCTT +
Preference number: 2 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGETFWT*QDSLPL
Trigger: AAGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTC...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CAA 90 bp CAACACAGGACAATCAATAACCATAGTGGTTACAATTCCAAGCCATaGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTG +
Preference number: 2 (lower is better)
Translates to: QHRTINNHSGYNSKP*YYMIIDQLPSYRSL
Trigger: CAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACTATGGTTATTGATTGTCCTGTGTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR TCA 90 bp TTCCTTCGAGGAAAGTTGGTGAGAAGTTCAAAACGTTCATTTGGGTATCCTTTACTCAGGTTAGGACAATaGAAGTCACCCCATGCTATA +
Preference number: 2 (lower is better)
Translates to: FLRGKLVRSSKRSFGYPLLRLGQ*KSPHAI
Trigger: TATAGCATGGGGTGACTTTCATTGTCCTAACCTGAG...TAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp ACACAATCAATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATGCATCACCAACTCTAATTTaGTTTTGGGTTTTGTTGGCA +
Preference number: 2 (lower is better)
Translates to: TQSMKTCQNWTSQVTSNASPTLI*FWVLLA
Trigger: TGCCAACAAAACCCAAAATCAAATTAGAGTTGGTGA...TGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTTTTGCCCGAAGAGTCTaGGGAGTAACGTTAACATTT +
Preference number: 2 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRFARRV*GVTLTF
Trigger: AAATGTTAACGTTACTCCCCAGACTCTTCGGGCAAA...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCAGAAATCCCGTCACTTaGTCCAAGAAAGAAGATACA +
Preference number: 2 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSRNPVT*SKKEDT
Trigger: TGTATCTTCTTTCTTGGACCAAGTGACGGGATTTCT...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAAGCCATTGTACTACATaGTTATTGACCAGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: TKGEKETDYRRDQEIREGSHCTT*LLTSCL
Trigger: AAGGCAGCTGGTCAATAATCATGTAGTACAATGGCT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR TCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCCTAAATGTTGTCTTCTaGATGGAGTTGAAAGGTCTT +
Preference number: 2 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLLNVVF*MELKGL
Trigger: AAGACCTTTCAACTCCATTCAGAAGACAACATTTAG...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAAAAGCCCAAGACATCTaGAAATTACTAGTAACCTCC +
Preference number: 2 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKKAQDI*KLLVTS
Trigger: GGAGGTTACTAGTAATTTTCAGATGTCTTGGGCTTT...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR TCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTAGCGGATTAAATTCTTaGGCAAGGCAATACTCCTTA +
Preference number: 2 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRSGLNS*ARQYSL
Trigger: TAAGGAGTATTGCCTTGCTCAAGAATTTAATCCGCT...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTAGTCAAAAGAAAACGTaGGCTACAGTGCTTGCCACT +
Preference number: 2 (lower is better)
Translates to: HQLVLISLYLRLEDSLTASQKKT*ATVLAT
Trigger: AGTGGCAAGCACTGTAGCTCACGTTTTCTTTTGACT...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTGGACTGACACACAGGTaGGTCAAAAACCATAACCAT +
Preference number: 2 (lower is better)
Translates to: SKILLLEIITYRLGRSIGGLTHR*VKNHNH
Trigger: ATGGTTATGGTTTTTGACTCACCTGTGTGTCAGTCC...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATTCAGATTCTTCATCTaGGCGGCTATCCTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: TKGEKETDYRRDQEIREGFRFFI*AAILFC
Trigger: ACAAAACAGGATAGCCGCTCAGATGAAGAATCTGAA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR GCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCTCACCCCATGCTATATaGTCCATATTTAACACTCAT +
Preference number: 2 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSSPHAI*SIFNTH
Trigger: ATGAGTGTTAAATATGGAGCATATAGCATGGGGTGA...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CCA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTTTGCTGGAGTACAGATaGGTGCCATCAGAGCACAAA +
Preference number: 2 (lower is better)
Translates to: NITTGALSLLSSWIQSQILLEYR*VPSEHK
Trigger: TTTGTGCTCTGATGGCACCCATCTGTACTCCAGCAA...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAATATGGTATTCTCTGTTaGGTTATCTGCAGTTCTAAA +
Preference number: 2 (lower is better)
Translates to: LLQTARHPAECKQSNVIKYGILC*VICSSK
Trigger: TTTAGAACTGCAGATAACCCAACAGAGAATACCATA...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTATTCATGCCAAAGCTTaGATGGAAGCCCCTCAAAGT +
Preference number: 2 (lower is better)
Translates to: SKILLLEIITYRLGRSIGIHAKA*MEAPQS
Trigger: ACTTTGAGGGGCTTCCATCCAAGCTTTGGCATGAAT...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACATCAGCTGTGCTTTTaGTCCATTTACATCTATCCC +
Preference number: 2 (lower is better)
Translates to: TKGEKETDYRRDQEIREGHQLCF*SIYIYP
Trigger: GGGATAGATGTAAATGGACCAAAAGCACAGCTGATG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CAA 90 bp TGCAAAGTCTTGAACATTTTGAATGTTTATCATCAGCCACTTATTTaGCATCTGGCCACACTCTTTGGCTGTTTCAAAGCTGCCTTTATG +
Preference number: 2 (lower is better)
Translates to: CKVLNILNVYHQPLI*HLATLFGCFKAAFM
Trigger: CATAAAGGCAGCTTTGAAACAGCCAAAGAGTGTGGCCAGATGCAAAATAAGTGGCTGATGATAAACATTCAAAATGTTCAAGACTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAATCACCAACTCTAATTTaGTTTTGGGTTTTGTTGGCA +
Preference number: 2 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKSPTLI*FWVLLA
Trigger: TGCCAACAAAACCCAAAATCAAATTAGAGTTGGTGA...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR GCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACCAAAGGAACTAATATaGTGTGCTGGCAAAAATAGC +
Preference number: 2 (lower is better)
Translates to: TKGEKETDYRRDQEIREGPKELI*CAGKNS
Trigger: GCTATTTTTGCCAGCACAGCATATTAGTTCCTTTGG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR GCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTAGTGGCAGAACTTCATaGCCCAAATCTAGAAGTTAC +
Preference number: 2 (lower is better)
Translates to: HQLVLISLYLRLEDSLTASGRTS*PKSRSY
Trigger: GTAACTTCTAGATTTGGGGCATGAAGTTCTGCCACT...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR GCA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTCAATCAATGAAGACATaGCAGAACTGGACATCCCAG +
Preference number: 2 (lower is better)
Translates to: NITTGALSLLSSWIQSQIQSMKT*QNWTSQ
Trigger: CTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTG...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAAATAGTCCTTATAGCTaGGAACATGAAAATCCTTTG +
Preference number: 2 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGNSPYS*EHENPL
Trigger: CAAAGGATTTTCATGTTCCCAGCTATAAGGACTATT...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATATTCCCTTTTTCCATCTaGATACCGCAACATCAGCTG +
Preference number: 2 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIFPFSI*IPQHQL
Trigger: CAGCTGATGTTGCGGTATCCAGATGGAAAAAGGGAA...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CAA 90 bp AGGACTCCATTTAAGCTCAAAATACGAAATGAGCATAGGGTGAAGTaGATGTGTAAATGGTATTCTACAGATTCAAGATGGCCTCTTCTA +
Preference number: 2 (lower is better)
Translates to: RTPFKLKIRNEHRVK*MCKWYSTDSRWPLL
Trigger: TAGAAGAGGCCATCTTGAATCTGTAGAATACCATTTACACATCAACTTCACCCTATGCTCATTTCGTATTTTGAGCTTAAATGGAGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR TCA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTTACAAAGCCAAACAATaGGAAGAGAATCATCTGGGT +
Preference number: 2 (lower is better)
Translates to: NITTGALSLLSSWIQSQIYKAKQ*EENHLG
Trigger: ACCCAGATGATTCTCTTCTCATTGTTTGGCTTTGTA...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR TCA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTATACCCAGAGTATTGTaGTCTCTAGAGAGGAAATAC +
Preference number: 2 (lower is better)
Translates to: NITTGALSLLSSWIQSQIIPRVL*SLERKY
Trigger: GTATTTCCTCTCTAGAGATCACAATACTCTGGGTAT...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR GCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATACCCAAATCCCCTAATTaGCAAGAGAGCAATCTTAAA +
Preference number: 2 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIPKSPN*QESNLK
Trigger: TTTAAGATTGCTCTCTTGGCAATTAGGGGATTTGGG...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTAGGCAATACTCCTTATaGATTCTTCCCATGTACAAT +
Preference number: 2 (lower is better)
Translates to: SKILLLEIITYRLGRSIGRQYSL*ILPMYN
Trigger: ATTGTACATGGGAAGAATCCATAAGGAGTATTGCCT...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CCA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTAATAGTCCTTATAGCTaGGAACATGAAAATCCTTTG +
Preference number: 2 (lower is better)
Translates to: NITTGALSLLSSWIQSQINSPYS*EHENPL
Trigger: CAAAGGATTTTCATGTTCCCAGCTATAAGGACTATT...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp GCTGGAGTACAGATGGGTGCCATCAGAGCACAAAGCTaGGCAAACCTCTCTTCTTACCCTGTGCCCTCCCTG +
Preference number: 3 (lower is better)
Translates to: AGVQMGAIRAQS*ANLSSYPVPSL
Trigger: CAGGGAGGGCACAGGGTAAGAAGAGAGGTTTGCTCAGCTTTGTGCTCTGATGGCACCCATCTGTACTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCTGGTCCAGCTGCCCCTaGCTCAACAATCCCAAAGAC +
Preference number: 3 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTWSSCP*LNNPKD
Trigger: GTCTTTGGGATTGTTGAGCAAGGGGCAGCTGGACCA...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCGAGAAGGAAGGTGACTaGCTTGCCCAACTTTGGCTC +
Preference number: 3 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTEKEGD*LAQLWL
Trigger: GAGCCAAAGTTGGGCAAGCAAGTCACCTTCCTTCTC...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCAATCTAGCCATTCCTTaGCCCGAAGAGTCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTNLAIP*PEESGE
Trigger: CTCCCCAGACTCTTCGGGCAAAGGAATGGCTAGATT...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp ATCCTTGGTGGTTTGTGGCTGTTCCAGGATCAGTTCTaGCTGGTGGCTCAGTCAGCGGCCTTCTATTCTCCT +
Preference number: 3 (lower is better)
Translates to: ILGGLWLFQDQF*LVAQSAAFYSP
Trigger: AGGAGAATAGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGATCCTGGAACAGCCACAAACCACCAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTAGGAAGGTGACTTGCTaGCCCAACTTTGGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGRKVTC*PNFGSV
Trigger: CACAGAGCCAAAGTTGGGCAAGCAAGTCACCTTCCT...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CAA 90 bp CCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGATCTGGCCACACTCTTaGGCTGTTTCAAAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: PVSLNPQLAILGGLWLFQIWPHS*AVSKLP
Trigger: AGGCAGCTTTGAAACAGCCAAAGAGTGTGGCCAGAT...CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACCACAGCTGGCAATCCTaGGTGGTTTGTGGCTGTTCC +
Preference number: 3 (lower is better)
Translates to: ACPTLALWSYEPKCILSDHSWQS*VVCGCS
Trigger: GGAACAGCCACAAACCACCAAGGATTGCCAGCTGTG...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR GCA 72 bp CCACATGGGTCAGATAAGCAGCCCCTACTAGAAGCTTaGTACTCGTTAACTGAAAAGTGGAGGCCACGCACT +
Preference number: 3 (lower is better)
Translates to: PHGSDKQPLLEA*YSLTEKWRPRT
Trigger: AGTGCGTGGCCTCCACTTTTCAGTTAACGAGTAGCAAGCTTCTAGTAGGGGCTGCTTATCTGACCCATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp AGCTGCCTTCCTACAGATCACTGCAGACTCAGACAATaGAGGGCTCCAAAGGAACTAATATGCTGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: SCLPTDHCRLRQ*RAPKELICCAG
Trigger: GCCAGCACAGCATATTAGTTCCTTTGGAGCCCTCCATTGTCTGAGTCTGCAGTGATCTGTAGGAAGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR CCA 72 bp TTGGTGGTTTGTGGCTGTTCCAGGATCAGTTCTGACTaGTGGCTCAGTCAGCGGCCTTCTATTCTCCTCTTT +
Preference number: 3 (lower is better)
Translates to: LVVCGCSRISSD*WLSQRPSILLF
Trigger: AAAGAGGAGAATAGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGATCCTGGAACAGCCACAAACCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp GCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTCACTTAGGAAGGTGACTTGCTaGCCCAACTTTGGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: AGKNSKHLPIPVTTIGSLRKVTC*PNFGSV
Trigger: CACAGAGCCAAAGTTGGGCAAGCAAGTCACCTTCCT...AAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CAA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCACACGTTTGAGCGATTaGGGCTTCAGCTATGACTTT +
Preference number: 3 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTTRLSD*GFSYDF
Trigger: AAAGTCATAGCTGAAGCCCAAATCGCTCAAACGTGT...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp GTTCAAGCCGAACTCATACAAAGCATGCACAGAGCCTaGACAGACACTGCTGAGAGTTTCCAGGGAACAATC +
Preference number: 3 (lower is better)
Translates to: VQAELIQSMHRA*TDTAESFQGTI
Trigger: GATTGTTCCCTGGAAACTCTCAGCAGTGTCTGTGCAGGCTCTGTGCATGCTTTGTATGAGTTCGGCTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp CCCCTACTAGAAGCTTGCTACTCGTTAACTGAAAAGTaGAGGCCACGCACTACTTTCACTCTCTCTAGCAGG +
Preference number: 3 (lower is better)
Translates to: PLLEACYSLTEK*RPRTTFTLSSR
Trigger: CCTGCTAGAGAGAGTGAAAGTAGTGCGTGGCCTCCACTTTTCAGTTAACGAGTAGCAAGCTTCTAGTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp TCCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTaGTTTGTGGCTGTTCCAGGATCAGTTCTGACTGGT +
Preference number: 3 (lower is better)
Translates to: SSISESTAGNPW*FVAVPGSVLTG
Trigger: ACCAGTCAGAACTGATCCTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTGGAGACTTTCTGGACTaGGCAAGATTCTCTACCTCT +
Preference number: 3 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGGDFLD*ARFSTS
Trigger: AGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTCC...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 72 bp CCTTGCTCAACAATCCCAAAGACTTCTTCCCACCACTaGGAAGAGCTGCAGAAATCAACGGTATCTCCTAGC +
Preference number: 3 (lower is better)
Translates to: PCSTIPKTSSHH*EELQKSTVSPS
Trigger: GCTAGGAGATACCGTTGATTTCTGCAGCTCTTCTCAGTGGTGGGAAGAAGTCTTTGGGATTGTTGAGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp TTCCTTGAGTTTGGTCCCTCTCTCAGCACAGTGAGCTaGTGTCTTCAAAAGACTTATCGTCCCACTCCCTTC +
Preference number: 3 (lower is better)
Translates to: FLEFGPSLSTVS*CLQKTYRPTPF
Trigger: GAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACTGTGCTGAGAGAGGGACCAAACTCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp ATCTCCAGTATCTCTGAATCCACAGCTGGCAATCCTTaGTGGTTTGTGGCTGTTCCAGGATCAGTTCTGACT +
Preference number: 3 (lower is better)
Translates to: ISSISESTAGNP*WFVAVPGSVLT
Trigger: AGTCAGAACTGATCCTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTAATCTAGCCATTCCTTaGCCCGAAGAGTCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSNLAIP*PEESGE
Trigger: CTCCCCAGACTCTTCGGGCAAAGGAATGGCTAGATT...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCGCTTCAGCTATGACTTaGCTGGAGTACAGATGGGTG +
Preference number: 3 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPASAMT*LEYRWV
Trigger: CACCCATCTGTACTCCAGCAAAGTCATAGCTGAAGC...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCTACTGTAAAATCATGTaGCTGCAAACAGCAAGGCAT +
Preference number: 3 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTYCKIM*LQTARH
Trigger: ATGCCTTGCTGTTTGCAGCAACATGATTTTACAGTA...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCATTGACTTCACACGTTaGAGCGATTTGGGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPIDFTR*SDLGFS
Trigger: GCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAAT...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCTCACTGATGAACACGTaGGCAGTTCTCCCAACTGTT +
Preference number: 3 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPSLMNT*AVLPTV
Trigger: AACAGTTGGGAGAACTGCCAACGTGTTCATCAGTGA...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp CTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTTCTGACTTCTTCACAGCTTCGTaGCTCCACACATCGCGGTTG +
Preference number: 3 (lower is better)
Translates to: LGPRKKIHLTGAILLASDFFTAS*LHTSRL
Trigger: CAACCGCGATGTGTGGAGCAACGAAGCTGTGAAGAA...GTCAGAAGCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp GCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTCACTTCAGAAATCCCGTCACTaGGTCCAAGAAAGAAGATAC +
Preference number: 3 (lower is better)
Translates to: AGKNSKHLPIPVTTIGSLQKSRH*VQERRY
Trigger: GTATCTTCTTTCTTGGACCAAGTGACGGGATTTCTG...AAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACAGAAAGTCCATCCAGTaGTCCATGTTCACCCAGAAA +
Preference number: 3 (lower is better)
Translates to: ACPTLALWSYEPKCILSDRKSIQ*SMFTQK
Trigger: TTTCTGGGTGAACATGGACAACTGGATGGACTTTCT...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 72 bp CATACAAAGCATGCACAGAGCCTGCACAGACACTGCTaGGAGTTTCCAGGGAACAATCAATACCTACTCGAA +
Preference number: 3 (lower is better)
Translates to: HTKHAQSLHRHC*EFPGNNQYLLE
Trigger: TTCGAGTAGGTATTGATTGTTCCCTGGAAACTCTCAGCAGTGTCTGTGCAGGCTCTGTGCATGCTTTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp GACATGCCAGAACTGGACATCCCAGGTGACTTCAAATaGATTGTTCAAGCCGAACTCATACAAAGCATGCAC +
Preference number: 3 (lower is better)
Translates to: DMPELDIPGDFK*IVQAELIQSMH
Trigger: GTGCATGCTTTGTATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp GACTGCACGTGCTTCACCAAAGCTAGCAGTTTAGCTTaGTCTGGAAGAGTGATCTGTTCCCTTTTTCCATCT +
Preference number: 3 (lower is better)
Translates to: DCTCFTKASSLA*SGRVICSLFPS
Trigger: AGATGGAAAAAGGGAACAGATCACTCTTCCAGAGCAAGCTAAACTGCTAGCTTTGGTGAAGCACGTGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CCA 72 bp GTTTCTTGTAAGGAGGCTCTGATGGCAGCTTCTAGCTaGCTGTCTTCACTTGCATCTATAAGGCTCTCTGAA +
Preference number: 3 (lower is better)
Translates to: VSCKEALMAASS*LSSLASIRLSE
Trigger: TTCAGAGAGCCTTATAGATGCAAGTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp CCCGTCACTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCCATCAGCCACTTATTTaGCATCTGGCCACACTCTTT +
Preference number: 3 (lower is better)
Translates to: PVTWSKKEDTSNWCHSTSHQPLI*HLATLF
Trigger: AAAGAGTGTGGCCAGATGCAAAATAAGTGGCTGATG...GCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAGTGACGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 72 bp AATGCAGCAGTTGAATGTATAGATCAGAGGTTTCCTTaGGTTTGGTCCCTCTCTCAGCACAGTGAGCTGATG +
Preference number: 3 (lower is better)
Translates to: NAAVECIDQRFP*VWSLSQHSELM
Trigger: CATCAGCTCACTGTGCTGAGAGAGGGACCAAACTCAAGGAAACCTCTGATCTATACATTCAACTGCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp TGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATaGATACTTAGTGACATGTATCTCACAGGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: CPTLALWSYEPK*ILSDMYLTGKG
Trigger: CCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR GCA 72 bp TTAGCCTATTCATCAAGGCTGGTATTACCGGAAAACTaGCATGTTCACCAGAAGAGCTGTCTCTTCCTATGC +
Preference number: 3 (lower is better)
Translates to: LAYSSRLVLPEN*HVHQKSCLFLC
Trigger: GCATAGGAAGAGACAGCTCTTCTGGTGAACATGGCAGTTTTCCGGTAATACCAGCCTTGATGAATAGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp TATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTaGCAAGATTCTCTACCTCTTCTTCTTCATCAGAGC +
Preference number: 3 (lower is better)
Translates to: YAPNLCGETFWT*QDSLPLLLHQS
Trigger: GCTCTGATGAAGAAGAAGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CCA 72 bp TTGCTCTGGAAGAGTGATCTGTTCCCTTTTTCCATCTaGATACCGCAACATCAGCTGTGCTTTTGGTCCATT +
Preference number: 3 (lower is better)
Translates to: LLWKSDLFPFSI*IPQHQLCFWSI
Trigger: AATGGACCAAAAGCACAGCTGATGTTGCGGTATCCAGATGGAAAAAGGGAACAGATCACTCTTCCAGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACTTGCTTGCCCAACTTaGGCTCTGTGGTCCTATGAG +
Preference number: 3 (lower is better)
Translates to: TKGEKETDYRRDQEIREGLACPT*ALWSYE
Trigger: CTCATAGGACCACAGAGCCAAAGTTGGGCAAGCAAG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CAA 90 bp TTCCTTCGAGGAAAGTTGGTGAGAAGTTCAAAACGTTCATTTGGGTATCCTTTACTTGCTTGCCCAACTTaGGCTCTGTGGTCCTATGAG +
Preference number: 3 (lower is better)
Translates to: FLRGKLVRSSKRSFGYPLLACPT*ALWSYE
Trigger: CTCATAGGACCACAGAGCCAAAGTTGGGCAAGCAAG...TAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 72 bp TATTCTTCACAGCTTCGTTGCTCCACACATCGCGGTTaGGGCACTGACATGCAAAGTCTTGAACATTTTGAA +
Preference number: 3 (lower is better)
Translates to: YSSQLRCSTHRG*GTDMQSLEHFE
Trigger: TTCAAAATGTTCAAGACTTTGCATGTCAGTGCCTCAACCGCGATGTGTGGAGCAACGAAGCTGTGAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 72 bp GTGTTGAATCAAAATGTGTTTCTTGTAAGGAGGCTCTaGTGGCAGCTTCTAGCTGGCTGTCTTCACTTGCAT +
Preference number: 3 (lower is better)
Translates to: VLNQNVFLVRRL*WQLLAGCLHLH
Trigger: ATGCAAGTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACAAGAAACACATTTTGATTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR GCA 72 bp TCAAAACGTTCATTTGGGTATCCTTTAGACTGCACGTaGTTCACCAAAGCTAGCAGTTTAGCTTGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: SKRSFGYPLDCT*FTKASSLACSG
Trigger: TCCAGAGCAAGCTAAACTGCTAGCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCCAAATGAACGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CCA 72 bp TCGAGGAAAGTTGGTGAGAAGTTCAAAACGTTCATTTaGGTATCCTTTAGACTGCACGTGCTTCACCAAAGC +
Preference number: 3 (lower is better)
Translates to: SRKVGEKFKTFI*VSFRLHVLHQS
Trigger: GCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATACAAAGACAGTCTCTaGAGGACAAAGGCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: TKGEKETDYRRDQEIREGYKDSL*RTKACL
Trigger: GAGGCAGGCCTTTGTCCTCAAGAGACTGTCTTTGTA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR TCA 72 bp ACCATAGTGGTTACAATTCCAAGCCATTGTACTACATaGTTATTGACCAGCTGCCTTCCTACAGATCACTGC +
Preference number: 3 (lower is better)
Translates to: TIVVTIPSHCTT*LLTSCLPTDHC
Trigger: GCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACTATGGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR TCA 72 bp TTCTTACCCTGTGCCCTCCCTGAATTTTTGGATTTCTaGGCTTGTCTACTACCAACAAATGTTTTACCCTCC +
Preference number: 3 (lower is better)
Translates to: FLPCALPEFLDF*ACLLPTNVLPS
Trigger: GGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCCAAAAATTCAGGGAGGGCACAGGGTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp ACAATTTGGTACAGACCAAACCAGAGGATCCCCAACTaGCAGCAAGATCCTCCTTCTGGAAATTATTACCTA +
Preference number: 3 (lower is better)
Translates to: TIWYRPNQRIPN*QQDPPSGNYYL
Trigger: TAGGTAATAATTTCCAGAAGGAGGATCTTGCTGTCAGTTGGGGATCCTCTGGTTTGGTCTGTACCAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp AGAAGTTCAAAACGTTCATTTGGGTATCCTTTAGACTaGACGTGCTTCACCAAAGCTAGCAGTTTAGCTTGC +
Preference number: 3 (lower is better)
Translates to: RSSKRSFGYPLD*TCFTKASSLAC
Trigger: GCAAGCTAAACTGCTAGCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCCAAATGAACGTTTTGAACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR-3UTR CAA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCTTAAAAGTTCTAGTTTaGCCACCAGAATCACGACTA +
Preference number: 3 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPLKVLV*PPESRL
Trigger: TAGTCGTGATTCTGGTGGCAAAACTAGAACTTTTAA...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAAGGAGAAACCGATATATaGGTATGGTATTCTCTGTTG +
Preference number: 3 (lower is better)
Translates to: LLQTARHPAECKQSNVIKGETDI*VWYSLL
Trigger: CAACAGAGAATACCATACCAATATATCGGTTTCTCC...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp AACTGGAAGAAGCATACTGTCAGCGGATTAAATTCTTaGGCAAGGCAATACTCCTTATGGATTCTTCCCATG +
Preference number: 3 (lower is better)
Translates to: NWKKHTVSGLNS*ARQYSLWILPM
Trigger: CATGGGAAGAATCCATAAGGAGTATTGCCTTGCTCAAGAATTTAATCCGCTGACAGTATGCTTCTTCCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp AACCTCTCTTCTTACCCTGTGCCCTCCCTGAATTTTTaGATTTCTGAGCTTGTCTACTACCAACAAATGTTT +
Preference number: 3 (lower is better)
Translates to: NLSSYPVPSLNF*ISELVYYQQMF
Trigger: AAACATTTGTTGGTAGTAGACAAGCTCAGAAATCCAAAAATTCAGGGAGGGCACAGGGTAAGAAGAGAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp ACACAATCAATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATGCAAAAAGCCTGGATATTTaGTTAAGCGACATTTCCACA +
Preference number: 3 (lower is better)
Translates to: TQSMKTCQNWTSQVTSNAKSLDI*LSDIST
Trigger: TGTGGAAATGTCGCTTAACAAAATATCCAGGCTTTT...TGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAAAAAGCCTGGATATTTaGTTAAGCGACATTTCCACA +
Preference number: 3 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGKSLDI*LSDIST
Trigger: TGTGGAAATGTCGCTTAACAAAATATCCAGGCTTTT...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR-3UTR CAA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTATAATCCTTTCCTACTaGGGTACTGGTTATGCCTTA +
Preference number: 3 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRIILSY*GTGYAL
Trigger: TAAGGCATAACCAGTACCCAAGTAGGAAAGGATTAT...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp AAAGAAAAGGAAACAGAGCCCTATAGGAAAAATGATTaGCTTCACACGTTTGAGCGATTTGGGCTTCAGCTA +
Preference number: 3 (lower is better)
Translates to: KEKETEPYRKND*LHTFERFGLQL
Trigger: TAGCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAATCATTTTTCCTATAGGGCTCTGTTTCCTTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp CAGGAGAAACCGATATATTGGTATGGTATTCTCTGTTaGGTTATCTGCAGTTCTAAAGAACATTCTTGCCAC +
Preference number: 3 (lower is better)
Translates to: QEKPIYWYGILC*VICSSKEHSCH
Trigger: GTGGCAAGAATGTTCTTTAGAACTGCAGATAACCCAACAGAGAATACCATACCAATATATCGGTTTCTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTTCTCATTTGGCACTGTaGTTTTCTCTTCTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: SKILLLEIITYRLGRSIGSHLAL*FSLLQF
Trigger: GAACTGGAGAAGAGAAAACAACAGTGCCAAATGAGA...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp AGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTaGACCTTTGACAGTATACAGCTCTATTTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: SLSTTNKCFTLQ*TFDSIQLYFSN
Trigger: GTTTGAAAAATAGAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp CGGGAGATTGAAGAGGCAAATGTACACAAAAGTATCTaGTGCATGCCAATTAGTATTAAGTTTCCTGTTCTT +
Preference number: 3 (lower is better)
Translates to: REIEEANVHKSI*CMPISIKFPVL
Trigger: AAGAACAGGAAACTTAATACTAATTGGCATGCACCAGATACTTTTGTGTACATTTGCCTCTTCAATCTCCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp TGTTTAAAAACACAATCAATGAAGACATGCCAGAACTaGACATCCCAGGTGACTTCAAATGCATTGTTCAAG +
Preference number: 3 (lower is better)
Translates to: CLKTQSMKTCQN*TSQVTSNALFK
Trigger: CTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGTTTTTAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp ATCTTGTATTGTAGACATCCCAGCTGCATGTTAAGCTaGGTGAAAGTACCATGCTGTCTTTTAAATCACTTT +
Preference number: 3 (lower is better)
Translates to: ILYCRHPSCMLS*VKVPCCLLNHF
Trigger: AAAGTGATTTAAAAGACAGCATGGTACTTTCACTCAGCTTAACATGCAGCTGGGATGTCTACAATACAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTATACTATACTATGCATaGGATTTGTACCTGGGTAGA +
Preference number: 3 (lower is better)
Translates to: SKILLLEIITYRLGRSIGILYYA*DLYLGR
Trigger: TCTACCCAGGTACAAATCCAATGCATAGTATAGTAT...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR-3UTR CAA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATATTTGGATTTCTGAGCTaGTCTACTACCAACAAATGT +
Preference number: 3 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIFGFLS*STTNKC
Trigger: ACATTTGTTGGTAGTAGACAAGCTCAGAAATCCAAA...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp AACGGCAAGTATGTTATCCAAGTTCAGAGATGCAACTaGGGAATTAACATGAAAACCATCTTTCACTCAATA +
Preference number: 3 (lower is better)
Translates to: NGKYVIQVQRCN*GINMKTIFHSI
Trigger: TATTGAGTGAAAGATGGTTTTCATGTTAATTCCTCAGTTGCATCTCTGAACTTGGATAACATACTTGCCGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp AAGAAAGTATACATTTTGTACGATTCTTCGGGAGATTaGAGAGGCAAATGTACACAAAAGTATCTGGTGCAT +
Preference number: 3 (lower is better)
Translates to: KKVYILYDSSGD*RGKCTQKYLVH
Trigger: ATGCACCAGATACTTTTGTGTACATTTGCCTCTTCAATCTCCCGAAGAATCGTACAAAATGTATACTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR TCA 72 bp TCTTCAAATTTAAGGCTTTCCCAAGCACCTTTATTATaGCTTACTAGATATACAGGAGGGTCTCTAATGTGT +
Preference number: 3 (lower is better)
Translates to: SSNLRLSQAPLL*LTRYTGGSLMC
Trigger: ACACATTAGAGACCCTCCTGTATATCTAGTAAGTCATAATAAAGGTGCTTGGGAAAGCCTTAAATTTGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp GAGATTGAAGAGGCAAATGTACACAAAAGTATCTGGTaGATGCCAATTAGTATTAAGTTTCCTGTTCTTTTC +
Preference number: 3 (lower is better)
Translates to: EIEEANVHKSIW*MPISIKFPVLF
Trigger: GAAAAGAACAGGAAACTTAATACTAATTGGCATGCACCAGATACTTTTGTGTACATTTGCCTCTTCAATCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp CCGATATATTGGTATGGTATTCTCTGTTGGGTTATCTaGAGTTCTAAAGAACATTCTTGCCACTATTCTAAA +
Preference number: 3 (lower is better)
Translates to: PIYWYGILCWVI*SSKEHSCHYSK
Trigger: TTTAGAATAGTGGCAAGAATGTTCTTTAGAACTGCAGATAACCCAACAGAGAATACCATACCAATATATCGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR GCA 72 bp TTGAAGAGGCAAATGTACACAAAAGTATCTGGTGCATaGCAATTAGTATTAAGTTTCCTGTTCTTTTCTCAT +
Preference number: 3 (lower is better)
Translates to: LKRQMYTKVSGA*QLVLSFLFFSH
Trigger: ATGAGAAAAGAACAGGAAACTTAATACTAATTGGCATGCACCAGATACTTTTGTGTACATTTGCCTCTTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CCA 72 bp GCCCTTTCTGCATATAACATATACTATACTATGCATTaGATTTGTACCTGGGTAGAGAAATTAAATCTTTCC +
Preference number: 3 (lower is better)
Translates to: ALSAYNIYYTMH*ICTWVEKLNLS
Trigger: GGAAAGATTTAATTTCTCTACCCAGGTACAAATCCAATGCATAGTATAGTATATGTTATATGCAGAAAGGGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCAGTGGATGGTCCAGCTaGCCCTTGCTCAACAATCCC +
Preference number: 4 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTSGWSS*PLLNNP
Trigger: GGGATTGTTGAGCAAGGGGCAGCTGGACCATCCACT...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TGTAAGGAGGCTCTGATGGCAGCTTCTAGCTGGCTGTCTTCACTTGCATCTATACTTGTAAGGAGGCTCTaGTGGCAGCTTCTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CKEALMAASSWLSSLASILVRRL*WQLLAG
Trigger: GCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACAAG...TATAGATGCAAGTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR GCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCCCTTTAGACTGCACGTaGTTCACCAAAGCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTPLDCT*FTKASS
Trigger: ACTGCTAGCTTTGGTGAAGCACGTGCAGTCTAAAGG...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTCATCTCCAGTATCTCTaGATCCACAGCTGGCAATCC +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGHLQYL*IHSWQS
Trigger: GGATTGCCAGCTGTGGATTCAGAGATACTGGAGATG...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp CCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGGGGTATCCTTTAGACTaGACGTGCTTCACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PVSLNPQLAILGGLWLFQGYPLD*TCFTKA
Trigger: AGCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCC...CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR GCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTGGAGTACAGATGGGTaGCATCAGAGCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGWSTDG*HQSTKL
Trigger: CAGCTTTGTGCTCTGATGGCACCCATCTGTACTCCA...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGTCTGGCCACACTCTTTaGCTGTTTCAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PVSLNPQLAILGGLWLFQSGHTL*LFQSCL
Trigger: AAGGCAGCTTTGAAACAGCCAAAGAGTGTGGCCAGA...CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp GATAATATTCTTCACAGCTTCGTTGCTCCACACATCGCGGTTGAGGCACTGACAATCAGTTCTGACTGGTaGCTCAGTCAGCGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DNILHSFVAPHIAVEALTISSDW*LSQRPS
Trigger: AGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGAT...TGTCAGTGCCTCAACCGCGATGTGTGGAGCAACGAAGCTGTGAAGAATATTATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCAGGCCACAAAGAGGGTaGGGTATCACAGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPRPQRG*GITELA
Trigger: GGCTAGCTCTGTGATACCCCACCCTCTTTGTGGCCT...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTAGCCACAAACGGATATaGACTCCTCACTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGSHKRI*TPHCQK
Trigger: TTTCTGGCAGTGAGGAGTTCATATCCGTTTGTGGCT...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAATCTCCTGACCTTAGGTaGTCTGCCCACCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKSPDLR*SAHLRL
Trigger: GAGGCGGAGGTGGGCAGATCACCTAAGGTCAGGAGA...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACCTGCACAGACACTGCTaGGAGTTTCCAGGGAACAAT +
Preference number: 4 (lower is better)
Translates to: ACPTLALWSYEPKCILSDLHRHC*EFPGNN
Trigger: ATTGTTCCCTGGAAACTCTCAGCAGTGTCTGTGCAG...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAAGGGGTTTCACCATGTTaGTCAGGCTGGCCTCGATCT +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKGVSPC*SGWPRS
Trigger: AGATCGAGGCCAGCCTGAGCAACATGGTGAAACCCC...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCCACTTATTTTGCATCTaGCCACACTCTTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTHLFCI*PHSLAV
Trigger: AACAGCCAAAGAGTGTGGCCAGATGCAAAATAAGTG...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTATGGCAGCTTCTAGCTaGCTGTCTTCACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGMAASS*LSSLAS
Trigger: AGATGCAAGTGAAGACAGCCAGCTAGAAGCTGCCAT...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCGAGACTTTCTGGACTTaGCAAGATTCTCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTETFWT*QDSLPL
Trigger: AAGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTC...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp GATAATATTCTTCACAGCTTCGTTGCTCCACACATCGCGGTTGAGGCACTGACAACAGCTGGCAATCCTTaGTGGTTTGTGGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: DNILHSFVAPHIAVEALTTAGNP*WFVAVP
Trigger: TGGAACAGCCACAAACCACCAAGGATTGCCAGCTGT...TGTCAGTGCCTCAACCGCGATGTGTGGAGCAACGAAGCTGTGAAGAATATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCGTGTGTCTCTCTAACTaGATAAAACAGGCAGGAATC +
Preference number: 4 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTVCLSN*IKQAGI
Trigger: GATTCCTGCCTGTTTTATCCAGTTAGAGAGACACAC...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCATGGTGGTGAACTGTTaGATTAACCCCTTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPMVVNC*INPFSA
Trigger: GGCGCTGAAGGGGTTAATTCAACAGTTCACCACCAT...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CCCGTCACTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCATGGTGGTGAACTGTTaGATTAACCCCTTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PVTWSKKEDTSNWCHSTSMVVNC*INPFSA
Trigger: GGCGCTGAAGGGGTTAATTCAACAGTTCACCACCAT...GCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAGTGACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR TCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTAGTATTTCCTGCTTTTaGGGAATTGGGGCACGAACT +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGSISCF*GIGART
Trigger: AGTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACT...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCCTTGTAAGGAGGCTCTaGTGGCAGCTTCTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSLVRRL*WQLLAG
Trigger: GCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACAAG...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTTTCCAGGATCAGTTCTaGCTGGTGGCTCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFFQDQF*LVAQSA
Trigger: CGCTGACTGAGCCACCAGTCAGAACTGATCCTGGAA...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTCTTGCTCTGGAAGAGTaGTCTGTTCCCTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGLALEE*SVPFFH
Trigger: ATGGAAAAAGGGAACAGATCACTCTTCCAGAGCAAG...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCTCTCTACGCAACATCTaGGGAACATACGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPSLRNI*GTYAPQ
Trigger: CTGAGGAGCGTATGTTCCTCAGATGTTGCGTAGAGA...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTCCGCAACATCAGCTGTaGTTTTGGTCCATTTACATC +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGPQHQL*FWSIYI
Trigger: GATGTAAATGGACCAAAAGCACAGCTGATGTTGCGG...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCCCAAAGGAACTAATATaGTGTGCTGGCAAAAATAGC +
Preference number: 4 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTPKELI*CAGKNS
Trigger: GCTATTTTTGCCAGCACAGCATATTAGTTCCTTTGG...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTCCAGGTGACTTCAAATaGATTGTTCAAGCCGAACTC +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGPGDFK*IVQAEL
Trigger: GAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGG...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCAGAAATCCCGTCACTTaGTCCAAGAAAGAAGATACA +
Preference number: 4 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTRNPVT*SKKEDT
Trigger: TGTATCTTCTTTCTTGGACCAAGTGACGGGATTTCT...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTGTGGGGAGACTTTCTaGACTTGGCAAGATTCTCTA +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGCGETF*TWQDSL
Trigger: TAGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACA...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACATCCTTGGTGGTTTGTaGCTGTTCCAGGATCAGTTC +
Preference number: 4 (lower is better)
Translates to: ACPTLALWSYEPKCILSDILGGL*LFQDQF
Trigger: GAACTGATCCTGGAACAGCCACAAACCACCAAGGAT...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTGCTGGCAATCCTTGGTaGTTTGTGGCTGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTAGNPW*FVAVPG
Trigger: TCCTGGAACAGCCACAAACCACCAAGGATTGCCAGC...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCGTCATCAAACTGAAATaGACCCTCGTGACGGGCACT +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPVIKLK*TLVTGT
Trigger: AGTGCCCGTCACGAGGGTCCATTTCAGTTTGATGAC...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp GCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTCACTTAAGACATGCCAGAACTaGACATCCCAGGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: AGKNSKHLPIPVTTIGSLKTCQN*TSQVTS
Trigger: TGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTT...AAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAATTCCAGGATCAGTTCTaGCTGGTGGCTCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKFQDQF*LVAQSA
Trigger: CGCTGACTGAGCCACCAGTCAGAACTGATCCTGGAA...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCTCTCTACGCAACATCTaGGGAACATACGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFSLRNI*GTYAPQ
Trigger: CTGAGGAGCGTATGTTCCTCAGATGTTGCGTAGAGA...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTACCCTGTGCCCTCCCTaGATTTTTGGATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTTLCPP*IFGFLS
Trigger: GCTCAGAAATCCAAAAATTCAGGGAGGGCACAGGGT...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTCACTTAGCTGCATGTTAAGCTaGGTGAAAGTACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: AGKNSKHLPIPVTTIGSLSCMLS*VKVPCC
Trigger: ACAGCATGGTACTTTCACTCAGCTTAACATGCAGCT...AAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCTTGCTACTCGTTAACTaGAAAGTGGAGGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFLLLVN*KVEATH
Trigger: GTGCGTGGCCTCCACTTTTCAGTTAACGAGTAGCAA...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTCAGAGGATCCCCAACTaGCAGCAAGATCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFQRIPN*QQDPPS
Trigger: AGAAGGAGGATCTTGCTGTCAGTTGGGGATCCTCTG...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTGATCAGAGGTTTCCTTaGGTTTGGTCCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTDQRFP*VWSLSQ
Trigger: CTGAGAGAGGGACCAAACTCAAGGAAACCTCTGATC...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATAAGAAGGAAGGTGACTTaGTTGCCCAACTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PELDIPGDFKCIVQAELIRRKVT*LPNFGS
Trigger: AGAGCCAAAGTTGGGCAAGCAAGTCACCTTCCTTCT...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp CCCGTCACTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCCTTCCTACAGATCACTaGAGACTCAGACAATGGAGG +
Preference number: 4 (lower is better)
Translates to: PVTWSKKEDTSNWCHSTSLPTDH*RLRQWR
Trigger: CCTCCATTGTCTGAGTCTGCAGTGATCTGTAGGAAG...GCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAGTGACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTAGACACTTGCTGAACTaGTACTGGGCTCTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTRHLLN*YWALQR
Trigger: TCGCTGAAGAGCCCAGTACCAGTTCAGCAAGTGTCT...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CCCGTCACTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTCCGTGGGTCCAATATaGAAACATAGGGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: PVTWSKKEDTSNWCHSTSSVGPI*KHRGNP
Trigger: GGGATTTCCCCTATGTTTCCATATTGGACCCACGGA...GCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAGTGACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACTGTGGGGAGACTTTCTaGACTTGGCAAGATTCTCTA +
Preference number: 4 (lower is better)
Translates to: ACPTLALWSYEPKCILSDCGETF*TWQDSL
Trigger: TAGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACA...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAAGGATCAGTTCTGACTaGTGGCTCAGTCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKRISSD*WLSQRP
Trigger: AGGCCGCTGACTGAGCCACCAGTCAGAACTGATCCT...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCGCTGGCAATCCTTGGTaGTTTGTGGCTGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLAGNPW*FVAVPG
Trigger: TCCTGGAACAGCCACAAACCACCAAGGATTGCCAGC...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCACAGCTGGCAATCCTTaGTGGTTTGTGGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFTAGNP*WFVAVP
Trigger: TGGAACAGCCACAAACCACCAAGGATTGCCAGCTGT...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTTTGCTTGCCCAACTTTaGCTCTGTGGTCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTLLAQL*LCGPMS
Trigger: GCTCATAGGACCACAGAGCCAAAGTTGGGCAAGCAA...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATATTGCTGGAGTACAGATaGGTGCCATCAGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: PELDIPGDFKCIVQAELILLEYR*VPSEHK
Trigger: TTTGTGCTCTGATGGCACCCATCTGTACTCCAGCAA...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAACCATGTTGCTCAGGCTaGCCTCGATCTCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKPCCSG*PRSPDL
Trigger: AAGGTCAGGAGATCGAGGCCAGCCTGAGCAACATGG...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp TGCCAGAACTGGACATCCCAGGTGACTTCAAATGCATaGTTCAAGCCGAACTCATACAAAGCATGCACAGAG +
Preference number: 4 (lower is better)
Translates to: CQNWTSQVTSNA*FKPNSYKACTE
Trigger: CTCTGTGCATGCTTTGTATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GATAATATTCTTCACAGCTTCGTTGCTCCACACATCGCGGTTGAGGCACTGACATTCAGATTCTTCATCTaGGCGGCTATCCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: DNILHSFVAPHIAVEALTFRFFI*AAILFC
Trigger: ACAAAACAGGATAGCCGCTCAGATGAAGAATCTGAA...TGTCAGTGCCTCAACCGCGATGTGTGGAGCAACGAAGCTGTGAAGAATATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR TCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTAGCGACATTTCCACATaGAGAACACAACAAAACCAA +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGSDIST*RTQQNQ
Trigger: TTGGTTTTGTTGTGTTCTTCATGTGGAAATGTCGCT...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp TGCTGTGCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTGTTCAGAGATGCAACTaGGGAATTAACATGAAAACC +
Preference number: 4 (lower is better)
Translates to: CCAGKNSKHLPIPVTTIGVQRCN*GINMKT
Trigger: GGTTTTCATGTTAATTCCTCAGTTGCATCTCTGAAC...ACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGCACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp ACACAATCAATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGACTTCACACGTTTaGGCGATTTGGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TQSMKTCQNWTSQVTSNALTSHV*AIWASA
Trigger: AGCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAA...TGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCCCTCTCTCAGCACAGTaGGCTGATGTCTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFPLSAQ*ADVFKR
Trigger: TCTTTTGAAGACATCAGCTCACTGTGCTGAGAGAGG...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCCTCCACTACTCCATCTaGTTTTTCAGGTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFLHYSI*FFRWHL
Trigger: GAGATGCCACCTGAAAAAGCAGATGGAGTAGTGGAG...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp TCAAAGCTGCCTTTATGCATCAAATCAATGGGTGGCCGGAATAGATCTGCAAGGGCTAGCAGTTTAGCTTaGTCTGGAAGAGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: SKLPLCIKSMGGRNRSARASSLA*SGRVIC
Trigger: ACAGATCACTCTTCCAGAGCAAGCTAAACTGCTAGC...CCTTGCAGATCTATTCCGGCCACCCATTGATTTGATGCATAAAGGCAGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR GCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCAGAAGGAAGGTGACTTaGTTGCCCAACTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFRRKVT*LPNFGS
Trigger: AGAGCCAAAGTTGGGCAAGCAAGTCACCTTCCTTCT...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCTTCAAGAGATTCTTGTaGCTCAGCCTCCCCATTAGC +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFFKRFL*LSLPIS
Trigger: GCTAATGGGGAGGCTGAGGCACAAGAATCTCTTGAA...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATTGCCCAGGATGGAGTaGAGTGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGLPRME*SGVISA
Trigger: AGCCGAGATCACACCACTGCACTCCATCCTGGGCAA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACAGTGGCAGAACTTCATaGCCCAAATCTAGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: ACPTLALWSYEPKCILSDSGRTS*PKSRSY
Trigger: GTAACTTCTAGATTTGGGGCATGAAGTTCTGCCACT...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCTCTGGCCACACTCTTTaGCTGTTTCAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFSGHTL*LFQSCL
Trigger: AAGGCAGCTTTGAAACAGCCAAAGAGTGTGGCCAGA...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp TGTAAGGAGGCTCTGATGGCAGCTTCTAGCTGGCTGTCTTCACTTGCATCTATACACTTATTTTGCATCTaGCCACACTCTTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: CKEALMAASSWLSSLASIHLFCI*PHSLAV
Trigger: AACAGCCAAAGAGTGTGGCCAGATGCAAAATAAGTG...TATAGATGCAAGTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAATGCCCCAAATCTTTGTaGGGAGACTTTCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKCPKSL*GDFLDL
Trigger: CAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCA...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCTGCCCCAAATCTTTGTaGGGAGACTTTCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFCPKSL*GDFLDL
Trigger: CAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCA...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp CTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTTCTGACTTGCTTGCCCAACTTTaGCTCTGTGGTCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: LGPRKKIHLTGAILLASDLLAQL*LCGPMS
Trigger: GCTCATAGGACCACAGAGCCAAAGTTGGGCAAGCAA...GTCAGAAGCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATACCACAGCATGGACTCTaGATTCCAATTCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: PELDIPGDFKCIVQAELIPQHGL*IPILIC
Trigger: GCAAATCAGAATTGGAATCCAGAGTCCATGCTGTGG...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCTATGGTATTCTCTGTTaGGTTATCTGCAGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTYGILC*VICSSK
Trigger: TTTAGAACTGCAGATAACCCAACAGAGAATACCATA...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCTCGTTAACTGAAAAGTaGAGGCCACGCACTACTTTC +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPSLTEK*RPRTTF
Trigger: GAAAGTAGTGCGTGGCCTCCACTTTTCAGTTAACGA...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp AGCAACTGGGTACAACACAGCAAGAGTATTCACAATTaGGTACAGACCAAACCAGAGGATCCCCAACTGACA +
Preference number: 4 (lower is better)
Translates to: SNWVQHSKSIHN*VQTKPEDPQLT
Trigger: TGTCAGTTGGGGATCCTCTGGTTTGGTCTGTACCAAATTGTGAATACTCTTGCTGTGTTGTACCCAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp CTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTaGGCAAGATTCTCTACCTCTTCTTCTTCATCAGAG +
Preference number: 4 (lower is better)
Translates to: LCPKSLWGDFLD*ARFSTSSSSSE
Trigger: CTCTGATGAAGAAGAAGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR TCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTAGTAGAGACACTTGCTaGACTGGTACTGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRSRDTC*TGTGLF
Trigger: GAAGAGCCCAGTACCAGTTCAGCAAGTGTCTCTACT...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATCCACACATCGCGGTTaGGGCACTGACATGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGSTHRG*GTDMQS
Trigger: ACTTTGCATGTCAGTGCCTCAACCGCGATGTGTGGA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATATTCAGATTCTTCATCTaGGCGGCTATCCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: PELDIPGDFKCIVQAELIFRFFI*AAILFC
Trigger: ACAAAACAGGATAGCCGCTCAGATGAAGAATCTGAA...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTTCTGACAGCCACAAACGGATATaGACTCCTCACTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LGPRKKIHLTGAILLASDSHKRI*TPHCQK
Trigger: TTTCTGGCAGTGAGGAGTTCATATCCGTTTGTGGCT...GTCAGAAGCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR TCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACTTCGAGGAAAGTTGGTaGGAAGTTCAAAACGTTCAT +
Preference number: 4 (lower is better)
Translates to: ACPTLALWSYEPKCILSDFEESW*EVQNVH
Trigger: ATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAA...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAAATAAGAGAAGGAAGGTaGCTTGCTTGCCCAACTTTG +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKIREGR*LACPTL
Trigger: CAAAGTTGGGCAAGCAAGTCACCTTCCTTCTCTTAT...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTTCTTCTGAATGGAGTTaGAAGGTCTTCCCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSSSEWS*KVFPLE
Trigger: CTCTAAGGGGAAGACCTTTCAACTCCATTCAGAAGA...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR TCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCTTGTCCAGAATAAGTTaGGCCACAAACATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSLSRIS*ATNIPG
Trigger: CCCTGGGATGTTTGTGGCTCAACTTATTCTGGACAA...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCCTCCACTACTCCATCTaGTTTTTCAGGTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLLHYSI*FFRWHL
Trigger: GAGATGCCACCTGAAAAAGCAGATGGAGTAGTGGAG...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGGGTATCCTTTAGACTaGACGTGCTTCACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFGYPLD*TCFTKA
Trigger: AGCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCC...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TCAAAGCTGCCTTTATGCATCAAATCAATGGGTGGCCGGAATAGATCTGCAAGGTTGAGGACAAAGGCCTaGCTCTTGCAATGTAATATC +
Preference number: 4 (lower is better)
Translates to: SKLPLCIKSMGGRNRSARLRTKA*LLQCNI
Trigger: GATATTACATTGCAAGAGGCAGGCCTTTGTCCTCAA...CCTTGCAGATCTATTCCGGCCACCCATTGATTTGATGCATAAAGGCAGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR GCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCCTAAAATGTGTACAGTaGAACACCATGTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPLKCVQ*NTMFHG
Trigger: GCCGTGAAACATGGTGTTGCACTGTACACATTTTAG...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTAACTCATACAAAGCATaGACAGAGCCTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTNSYKA*TEPAQT
Trigger: TGTCTGTGCAGGCTCTGTGCATGCTTTGTATGAGTT...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAACAATCAATGAAGACATaGCAGAACTGGACATCCCAG +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKQSMKT*QNWTSQ
Trigger: CTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTG...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAATCAGTTCTGACTGGTaGCTCAGTCAGCGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGISSDW*LSQRPS
Trigger: AGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGAT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTATCCTTGGTGGTTTGTaGCTGTTCCAGGATCAGTTC +
Preference number: 4 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFILGGL*LFQDQF
Trigger: GAACTGATCCTGGAACAGCCACAAACCACCAAGGAT...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAACAGTTTAGCTTGCTCTaGAAGAGTGATCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKQFSLL*KSDLFP
Trigger: AGGGAACAGATCACTCTTCCAGAGCAAGCTAAACTG...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTCAGTTTAGCTTGCTCTaGAAGAGTGATCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSQFSLL*KSDLFP
Trigger: AGGGAACAGATCACTCTTCCAGAGCAAGCTAAACTG...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp CTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTTCTGACCCAACTTTGGCTCTGTaGTCCTATGAGCCAAAATGC +
Preference number: 4 (lower is better)
Translates to: LGPRKKIHLTGAILLASDPTLAL*SYEPKC
Trigger: GCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGG...GTCAGAAGCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATAATCACGGGGAGAGACTaGAAGCATGAAATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PELDIPGDFKCIVQAELIITGRD*KHEILE
Trigger: TTCCAAAATTTCATGCTTCCAGTCTCTCCCCGTGAT...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp CAGAGCCCTATAGGAAAAATGATTGACTTCACACGTTaGAGCGATTTGGGCTTCAGCTATGACTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QSPIGKMIDFTR*SDLGFSYDFAG
Trigger: TCCAGCAAAGTCATAGCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAATCATTTTTCCTATAGGGCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTTCCACACATCGCGGTTaGGGCACTGACATGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGSTHRG*GTDMQS
Trigger: ACTTTGCATGTCAGTGCCTCAACCGCGATGTGTGGA...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCCTTGCTCTGGAAGAGTaGTCTGTTCCCTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLLALEE*SVPFFH
Trigger: ATGGAAAAAGGGAACAGATCACTCTTCCAGAGCAAG...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTTCTGACATAAGAGAAGGAAGGTaGCTTGCTTGCCCAACTTTG +
Preference number: 4 (lower is better)
Translates to: LGPRKKIHLTGAILLASDIREGR*LACPTL
Trigger: CAAAGTTGGGCAAGCAAGTCACCTTCCTTCTCTTAT...GTCAGAAGCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR TCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGACTCAGGTTAGGACAATaGAAGTCACCCCATGCTATA +
Preference number: 4 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGLRLGQ*KSPHAI
Trigger: TATAGCATGGGGTGACTTTCATTGTCCTAACCTGAG...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACTCACCAACTCTAATTTaGTTTTGGGTTTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: ACPTLALWSYEPKCILSDSPTLI*FWVLLA
Trigger: TGCCAACAAAACCCAAAATCAAATTAGAGTTGGTGA...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTTTTGGGCTTCAGCTATaGCTTTGCTGGAGTACAGAT +
Preference number: 4 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFFGLQL*LCWSTD
Trigger: ATCTGTACTCCAGCAAAGTCATAGCTGAAGCCCAAA...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCAGATTATCAGAGGAGTaGAGAAAACCGTGTCTAACA +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPRLSEE*RKPCLT
Trigger: TGTTAGACACGGTTTTCTTCACTCCTCTGATAATCT...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAACTGGACATCCCAGGTaGCTTCAAATGCATTGTTCA +
Preference number: 4 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGTGHPR*LQMHCS
Trigger: TGAACAATGCATTTGAAGTCACCTGGGATGTCCAGT...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAACTTCTTCCCACCACTaGGAAGAGCTGCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKTSSHH*EELQKS
Trigger: TGATTTCTGCAGCTCTTCTCAGTGGTGGGAAGAAGT...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTCTCAGCACAGTGAGCTaGTGTCTTCAAAAGACTTAT +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTLSTVS*CLQKTY
Trigger: ATAAGTCTTTTGAAGACATCAGCTCACTGTGCTGAG...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCATCAGCCACTTATTTTaGATCTGGCCACACTCTTTG +
Preference number: 4 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFISHLF*IWPHSL
Trigger: CAAAGAGTGTGGCCAGATGCAAAATAAGTGGCTGAT...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCGCTAGCAGTTTAGCTTaGTCTGGAAGAGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSASSLA*SGRVIC
Trigger: ACAGATCACTCTTCCAGAGCAAGCTAAACTGCTAGC...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAACCCCTACTAGAAGCTTaGTACTCGTTAACTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKPLLEA*YSLTEK
Trigger: CTTTTCAGTTAACGAGTAGCAAGCTTCTAGTAGGGG...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCACCACTGAGAAGAGCTaGAGAAATCAACGGTATCTC +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLTTEKS*RNQRYL
Trigger: GAGATACCGTTGATTTCTGCAGCTCTTCTCAGTGGT...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAATTCTTCTTCTGTGTGTaGTCTGACAGTAGAGACACT +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKFFFCV*SDSRDT
Trigger: AGTGTCTCTACTGTCAGACCACACACAGAAGAAGAA...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCCTGCTTTTGAGGAATTaGGGCACGAACTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLLLLRN*GTNFFF
Trigger: GAAGAAGAAGTTCGTGCCCCAATTCCTCAAAAGCAG...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTTCCGTGGGTCCAATATaGAAACATAGGGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRSVGPI*KHRGNP
Trigger: GGGATTTCCCCTATGTTTCCATATTGGACCCACGGA...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCCTTCTGACCTGTCCGTaGGTCCAATATGGAAACATA +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLLLTCP*VQYGNI
Trigger: TATGTTTCCATATTGGACCCACGGACAGGTCAGAAG...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGACTTCTGACCTGTCCGTaGGTCCAATATGGAAACATA +
Preference number: 4 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGLLTCP*VQYGNI
Trigger: TATGTTTCCATATTGGACCCACGGACAGGTCAGAAG...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAATGGCAGCTTCTAGCTaGCTGTCTTCACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKMAASS*LSSLAS
Trigger: AGATGCAAGTGAAGACAGCCAGCTAGAAGCTGCCAT...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTGAGACTTTCTGGACTTaGCAAGATTCTCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTETFWT*QDSLPL
Trigger: AAGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTC...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp CTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTTCTGACTTCCCTTTTTCCATCTaGATACCGCAACATCAGCTG +
Preference number: 4 (lower is better)
Translates to: LGPRKKIHLTGAILLASDFPFSI*IPQHQL
Trigger: CAGCTGATGTTGCGGTATCCAGATGGAAAAAGGGAA...GTCAGAAGCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp ACACAATCAATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATGCATTTGCCCGAAGAGTCTaGGGAGTAACGTTAACATTT +
Preference number: 4 (lower is better)
Translates to: TQSMKTCQNWTSQVTSNAFARRV*GVTLTF
Trigger: AAATGTTAACGTTACTCCCCAGACTCTTCGGGCAAA...TGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTTTTGCCCGAAGAGTCTaGGGAGTAACGTTAACATTT +
Preference number: 4 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSFARRV*GVTLTF
Trigger: AAATGTTAACGTTACTCCCCAGACTCTTCGGGCAAA...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTCTTTGTCGCCCAGGCTaGAGTGTAATGGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGLCRPG*SVMVRS
Trigger: AGATCGCACCATTACACTCCAGCCTGGGCGACAAAG...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCAAGGAGACCACAGCATaGACTCTGGATTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLKETTA*TLDSNS
Trigger: AGAATTGGAATCCAGAGTCCATGCTGTGGTCTCCTT...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp ACACAATCAATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATGCAGAGGGTTCAATAATCTaGTATGGATGGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: TQSMKTCQNWTSQVTSNAEGSII*YGWDTE
Trigger: TTCTGTGTCCCATCCATACCAGATTATTGAACCCTC...TGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACGAGAAACCGATATATTaGTATGGTATTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ACPTLALWSYEPKCILSDEKPIY*YGILCW
Trigger: CCAACAGAGAATACCATACCAATATATCGGTTTCTC...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp CAGAAAACAGAATTCGATGTGCATTTTAGGGAGCACTaGCCAGAAACATTACAACAGGAGCACTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QKTEFDVHFREH*PETLQQEHCLC
Trigger: ACAGAGACAGTGCTCCTGTTGTAATGTTTCTGGCAAGTGCTCCCTAAAATGCACATCGAATTCTGTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp TTCCTTCGAGGAAAGTTGGTGAGAAGTTCAAAACGTTCATTTGGGTATCCTTTAGAAACCATCAAAAATTaGACGTGCAGGCCGTCGTCT +
Preference number: 4 (lower is better)
Translates to: FLRGKLVRSSKRSFGYPLETIKN*TCRPSS
Trigger: AGACGACGGCCTGCACGTTCAATTTTTGATGGTTTC...TAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR TCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTCATCTCCAGTATCTCTaGATCCACAGCTGGCAATCC +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGHLQYL*IHSWQS
Trigger: GGATTGCCAGCTGTGGATTCAGAGATACTGGAGATG...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTAAAGCCCAAGACATCTaGAAATTACTAGTAACCTCC +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTKAQDI*KLLVTS
Trigger: GGAGGTTACTAGTAATTTTCAGATGTCTTGGGCTTT...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAACCTCCAGTGCACCTTTaGCAGTATACAGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKPPVHL*QYTALF
Trigger: AAATAGAGCTGTATACTGTCAAAGGTGCACTGGAGG...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAATCAGAGCACAAAGCTaGGCAAACCTCTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKIRAQS*ANLSSY
Trigger: GTAAGAAGAGAGGTTTGCTCAGCTTTGTGCTCTGAT...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTAAGTGGAAGTTCCATTaGGTCTTAGCCAGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFKWKFH*VLASSY
Trigger: GTAACTACTGGCTAAGACTCAATGGAACTTCCACTT...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCTCAAAGCTGCCTTTATaGATCAAATCAATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLSKLPL*IKSMGG
Trigger: GCCACCCATTGATTTGATGCATAAAGGCAGCTTTGA...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCTCAAAGCTGCCTTTATaGATCAAATCAATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSSKLPL*IKSMGG
Trigger: GCCACCCATTGATTTGATGCATAAAGGCAGCTTTGA...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCTGGCTGTTTCAAAGCTaGCTTTATGCATCAAATCAA +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPWLFQS*LYASNQ
Trigger: TTGATTTGATGCATAAAGGCAGCTTTGAAACAGCCA...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACCTTTAGACTGCACGTaGTTCACCAAAGCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGPLDCT*FTKASS
Trigger: ACTGCTAGCTTTGGTGAAGCACGTGCAGTCTAAAGG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp TTTCTATGCCCCAAATCTTTGTGGGGAGACTTTCTGGACTTGGCAAGATTCTCTCCAAAGGAACTAATATaGTGTGCTGGCAAAAATAGC +
Preference number: 4 (lower is better)
Translates to: FLCPKSLWGDFLDLARFSPKELI*CAGKNS
Trigger: GCTATTTTTGCCAGCACAGCATATTAGTTCCTTTGG...AGAGAATCTTGCCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR GCA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATACTCTGTTGGGTTATCTaGAGTTCTAAAGAACATTCT +
Preference number: 4 (lower is better)
Translates to: PELDIPGDFKCIVQAELILCWVI*SSKEHS
Trigger: AGAATGTTCTTTAGAACTGCAGATAACCCAACAGAG...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTGGTCCAGCTGCCCCTTaGTCAACAATCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: NITTGALSLLSSWIQSQIGPAAP*STIPKT
Trigger: AGTCTTTGGGATTGTTGAGCAAGGGGCAGCTGGACC...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGACATCAGCTGTGCTTTTaGTCCATTTACATCTATCCC +
Preference number: 4 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGHQLCF*SIYIYP
Trigger: GGGATAGATGTAAATGGACCAAAAGCACAGCTGATG...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTTTCCCTTTTTCCATCTaGATACCGCAACATCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRFPFSI*IPQHQL
Trigger: CAGCTGATGTTGCGGTATCCAGATGGAAAAAGGGAA...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TGTAAGGAGGCTCTGATGGCAGCTTCTAGCTGGCTGTCTTCACTTGCATCTATAAATAGTCCTTATAGCTaGGAACATGAAAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: CKEALMAASSWLSSLASINSPYS*EHENPL
Trigger: CAAAGGATTTTCATGTTCCCAGCTATAAGGACTATT...TATAGATGCAAGTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
3UTR CAA 72 bp CTAGTACTAGGAGAGGTCTTATCCTTACACTTCAGTTaGGTCACCAGATTAGGTAAGAAAGAAAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LVLGEVLSLHFS*VTRLGKKEKCG
Trigger: CCCACACTTTTCTTTCTTACCTAATCTGGTGACCAAACTGAAGTGTAAGGATAAGACCTCTCCTAGTACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR CAA 72 bp ATAGGAAAAATGATTGACTTCACACGTTTGAGCGATTaGGGCTTCAGCTATGACTTTGCTGGAGTACAGATG +
Preference number: 4 (lower is better)
Translates to: IGKMIDFTRLSD*GFSYDFAGVQM
Trigger: CATCTGTACTCCAGCAAAGTCATAGCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAATCATTTTTCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp GAATCTTTACTCCAGGGATCAATAATCCTTTCCTACTaGGGTACTGGTTATGCCTTAGTGGCAGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: ESLLQGSIILSY*GTGYALVAELH
Trigger: ATGAAGTTCTGCCACTAAGGCATAACCAGTACCCAAGTAGGAAAGGATTATTGATCCCTGGAGTAAAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp CCACACATCGCGGTTGAGGCACTGACATGCAAAGTCTaGAACATTTTGAATGTTTATCATCAGCCACTTATT +
Preference number: 4 (lower is better)
Translates to: PHIAVEALTCKV*NILNVYHQPLI
Trigger: AATAAGTGGCTGATGATAAACATTCAAAATGTTCAAGACTTTGCATGTCAGTGCCTCAACCGCGATGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR TCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAAGCCATTGTACTACATaGTTATTGACCAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKSHCTT*LLTSCL
Trigger: AAGGCAGCTGGTCAATAATCATGTAGTACAATGGCT...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTCTAAATGTTGTCTTCTaGATGGAGTTGAAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTLNVVF*MELKGL
Trigger: AAGACCTTTCAACTCCATTCAGAAGACAACATTTAG...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAGGACTGACACACAGGTaGGTCAAAAACCATAACCAT +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGGLTHR*VKNHNH
Trigger: ATGGTTATGGTTTTTGACTCACCTGTGTGTCAGTCC...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATAGCAAATACCCCAAGTTaGCTTCACTCAAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIANTPS*LHSSPQ
Trigger: TTGGGGGCTTGAGTGAAGTCAACTTGGGGTATTTGC...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTCTTCCTACAGATCACTaGAGACTCAGACAATGGAGG +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGLPTDH*RLRQWR
Trigger: CCTCCATTGTCTGAGTCTGCAGTGATCTGTAGGAAG...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCCCCAAATCCCCTAATTaGCAAGAGAGCAATCTTAAA +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLPKSPN*QESNLK
Trigger: TTTAAGATTGCTCTCTTGGCAATTAGGGGATTTGGG...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTACTGTAAAATCATGTTaGTGCAAACAGCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFTVKSC*CKQQGI
Trigger: GATGCCTTGCTGTTTGCAGCAACATGATTTTACAGT...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp GGATTCTTCCCATGTACAATCCGTAACTCTTCCCATGGGCCTTTATATCAACCCCTCCCCGTTTCAAGTTaGAGTATTAATATAAAGCAA +
Preference number: 4 (lower is better)
Translates to: GFFPCTIRNSSHGPLYQPLPVSS*SINIKQ
Trigger: TTGCTTTATATTAATACTGCAACTTGAAACGGGGAG...GGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACAAGAGACCACTTACTaGAACACACAATTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGQETTY*NTQFLL
Trigger: CAGCAGGAATTGTGTGTTCCAGTAAGTGGTCTCTTG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGACTTCATGTCCATTCTTaGACTAGCAGGATCAATACA +
Preference number: 4 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGLHVHS*TSRINT
Trigger: TGTATTGATCCTGCTAGTCCAAGAATGGACATGAAG...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACCTATTCATCAAGGCTaGTATTACCGGAAAACTGCC +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGPIHQG*YYRKTA
Trigger: GGCAGTTTTCCGGTAATACCAGCCTTGATGAATAGG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTCGTGTTAGCATCAACTaGTACTCATTTCTCTATATC +
Preference number: 4 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTRVSIN*YSFLYI
Trigger: GATATAGAGAAATGAGTACCAGTTGATGCTAACACG...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATAGAAACCATCAAAAATTaGACGTGCAGGCCGTCGTCT +
Preference number: 4 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIETIKN*TCRPSS
Trigger: AGACGACGGCCTGCACGTTCAATTTTTGATGGTTTC...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTCTCAGGTTAGGACAATaGAAGTCACCCCATGCTATA +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGLRLGQ*KSPHAI
Trigger: TATAGCATGGGGTGACTTTCATTGTCCTAACCTGAG...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCCTAAATGTTGTCTTCTaGATGGAGTTGAAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSLNVVF*MELKGL
Trigger: AAGACCTTTCAACTCCATTCAGAAGACAACATTTAG...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCGAATTTTTGGATTTCTaGGCTTGTCTACTACCAACA +
Preference number: 4 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSEFLDF*ACLLPT
Trigger: TGTTGGTAGTAGACAAGCTCAGAAATCCAAAAATTC...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTTACAAAGCCAAACAATaGGAAGAGAATCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRYKAKQ*EENHLG
Trigger: ACCCAGATGATTCTCTTCTCATTGTTTGGCTTTGTA...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTAGTCAAAAGAAAACGTaGGCTACAGTGCTTGCCACT +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGSQKKT*ATVLAT
Trigger: AGTGGCAAGCACTGTAGCTCACGTTTTCTTTTGACT...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAGAAAAAGGACTTTCCTaGAGGGCAAACAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGEKGLS*RANKTK
Trigger: TTTTGTTTTGTTTGCCCTTCAGGAAAGTCCTTTTTC...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAATTTCCAGATTATTGTTaGACGCTTCAAGCATATGTT +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKFPDYC*TLQAYV
Trigger: AACATATGCTTGAAGCGTGCAACAATAATCTGGAAA...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTCTTGGGTACTGGTTATaGCTTAGTGGCAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTALGYWL*LSGRTS
Trigger: TGAAGTTCTGCCACTAAGGCATAACCAGTACCCAAG...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTGTATTACCGGAAAACTaGCATGTTCACCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTAVLPEN*HVHQKS
Trigger: GCTCTTCTGGTGAACATGGCAGTTTTCCGGTAATAC...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTAAACAGAATTCGATGTaGATTTTAGGGAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRKQNSM*ILGSTC
Trigger: GCAAGTGCTCCCTAAAATGCACATCGAATTCTGTTT...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGATTCAAAACGTTCATTTaGGTATCCTTTAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGFKTFI*VSFRLH
Trigger: GTGCAGTCTAAAGGATACCCAAATGAACGTTTTGAA...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATACCAACTTTGGCTCTGTaGTCCTATGAGCCAAAATGC +
Preference number: 4 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIPTLAL*SYEPKC
Trigger: GCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGG...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTCAAGAGACCACTTACTaGAACACACAATTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGQETTY*NTQFLL
Trigger: CAGCAGGAATTGTGTGTTCCAGTAAGTGGTCTCTTG...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAACTTCATGTCCATTCTTaGACTAGCAGGATCAATACA +
Preference number: 4 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKLHVHS*TSRINT
Trigger: TGTATTGATCCTGCTAGTCCAAGAATGGACATGAAG...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAAGTACACAAAAGTATCTaGTGCATGCCAATTAGTATT +
Preference number: 4 (lower is better)
Translates to: LLQTARHPAECKQSNVIKVHKSI*CMPISI
Trigger: AATACTAATTGGCATGCACCAGATACTTTTGTGTAC...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTTTCCTACTTGGGTACTaGTTATGCCTTAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTAFLLGY*LCLSGR
Trigger: TCTGCCACTAAGGCATAACCAGTACCCAAGTAGGAA...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTATTCATGCCAAAGCTTaGATGGAAGCCCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTAIHAKA*MEAPQS
Trigger: ACTTTGAGGGGCTTCCATCCAAGCTTTGGCATGAAT...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp CTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTaGACAGTATACAGCTCTATTTTTCAAACGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLPTNVLPSSAP*TVYSSIFQTAS
Trigger: ACTTGCCGTTTGAAAAATAGAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp AAACTGGAAGAAGCATACTGTCAGCGGATTAAATTCTaGAGCAAGGCAATACTCCTTATGGATTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KLEEAYCQRIKF*SKAILLMDSSH
Trigger: ATGGGAAGAATCCATAAGGAGTATTGCCTTGCTCAAGAATTTAATCCGCTGACAGTATGCTTCTTCCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTAGTATTTCCTGCTTTTaGGGAATTGGGGCACGAACT +
Preference number: 4 (lower is better)
Translates to: NITTGALSLLSSWIQSQISISCF*GIGART
Trigger: AGTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACT...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATTCGAGGAAAGTTGGTaGGAAGTTCAAAACGTTCAT +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGFEESW*EVQNVH
Trigger: ATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTAGCCATTGTACTACATaGTTATTGACCAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTASHCTT*LLTSCL
Trigger: AAGGCAGCTGGTCAATAATCATGTAGTACAATGGCT...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAATACCTAAGTATGCCTaGAACAACACAGGACAATCA +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGIPKYA*NNTGQS
Trigger: TGATTGTCCTGTGTTGTTTCAGGCATACTTAGGTAT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAAAAGCCCAAGACATCTaGAAATTACTAGTAACCTCC +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGKAQDI*KLLVTS
Trigger: GGAGGTTACTAGTAATTTTCAGATGTCTTGGGCTTT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTTATAGGAAAAATGATTaGCTTCACACGTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRYRKND*LHTFER
Trigger: TCGCTCAAACGTGTGAAGTCAATCATTTTTCCTATA...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTCACAGTAACCCGAGTTaGAGAAGTTACTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTAHSNPS*RSYFGF
Trigger: GAAACCAAAGTAACTTCTTCAACTCGGGTTACTGTG...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTGATTCTTCGGGAGATTaGAGAGGCAAATGTACACAA +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTADSSGD*RGKCTQ
Trigger: TTGTGTACATTTGCCTCTTCAATCTCCCGAAGAATC...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAATACCCAGAGTATTGTaGTCTCTAGAGAGGAAATAC +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGIPRVL*SLERKY
Trigger: GTATTTCCTCTCTAGAGATCACAATACTCTGGGTAT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTATCAGCCACTTATTTTaGATCTGGCCACACTCTTTG +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGISHLF*IWPHSL
Trigger: CAAAGAGTGTGGCCAGATGCAAAATAAGTGGCTGAT...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACCCAAATCCCCTAATTaGCAAGAGAGCAATCTTAAA +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGPKSPN*QESNLK
Trigger: TTTAAGATTGCTCTCTTGGCAATTAGGGGATTTGGG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR GCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTTGTTTTACCCTCCAGTaGACCTTTGACAGTATACAG +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGCFTLQ*TFDSIQ
Trigger: CTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACA...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATACAGACAGCCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGYRQPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGCTGTCTGTA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATAAAACGTGAGCTACAGTaGTTGCCACTTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIKRELQ*LPLQSC
Trigger: ACAAGACTGAAGTGGCAAGCACTGTAGCTCACGTTT...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTTATGCATCAAATCAATaGGTGGCCGGAATAGATCTG +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGYASNQ*VAGIDL
Trigger: CAGATCTATTCCGGCCACCCATTGATTTGATGCATA...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAAGAAATCCCGTCACTTaGTCCAAGAAAGAAGATACA +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGRNPVT*SKKEDT
Trigger: TGTATCTTCTTTCTTGGACCAAGTGACGGGATTTCT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTTACTATACTATGCATTaGATTTGTACCTGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRYYTMH*ICTWVE
Trigger: CTCTACCCAGGTACAAATCCAATGCATAGTATAGTA...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCATCTGTGATTGCTCTTaGGAAAAATACTATCATTGG +
Preference number: 4 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLICDCS*EKYYHW
Trigger: CCAATGATAGTATTTTTCCCAAGAGCAATCACAGAT...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp CAGATTCAGATTCTTCATCTGAGCGGCTATCCTGTTTaGTCTGTGTTGAATCAAAATGTGTTTCTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: QIQILHLSGYPV*SVLNQNVFLVR
Trigger: CCTTACAAGAAACACATTTTGATTCAACACAGACAAAACAGGATAGCCGCTCAGATGAAGAATCTGAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR GCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATATTGAGGACAAAGGCCTaGCTCTTGCAATGTAATATC +
Preference number: 4 (lower is better)
Translates to: NLKVDENLKVSTQHLRNILRTKA*LLQCNI
Trigger: GATATTACATTGCAAGAGGCAGGCCTTTGTCCTCAA...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATTCAAAACGTTCATTTaGGTATCCTTTAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: TKGEKETDYRRDQEIREGFKTFI*VSFRLH
Trigger: GTGCAGTCTAAAGGATACCCAAATGAACGTTTTGAA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTCTATACTCTCCTCTTTaGAGATTTCAGTCATCGCAG +
Preference number: 4 (lower is better)
Translates to: NITTGALSLLSSWIQSQILYSPL*RFQSSQ
Trigger: CTGCGATGACTGAAATCTCCAAAGAGGAGAGTATAG...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTAGAGTATTCACAATTTaGTACAGACCAAACCAGAGG +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTARVFTI*YRPNQR
Trigger: CCTCTGGTTTGGTCTGTACCAAATTGTGAATACTCT...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp ATACCAAATCTCTATGTAACAGGAGAAACCGATATATaGGTATGGTATTCTCTGTTGGGTTATCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: IPNLYVTGETDI*VWYSLLGYLQF
Trigger: GAACTGCAGATAACCCAACAGAGAATACCATACCAATATATCGGTTTCTCCTGTTACATAGAGATTTGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATAAGCGACATTTCCACATaGAGAACACAACAAAACCAA +
Preference number: 4 (lower is better)
Translates to: NLKVDENLKVSTQHLRNISDIST*RTQQNQ
Trigger: TTGGTTTTGTTGTGTTCTTCATGTGGAAATGTCGCT...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR TCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATAAGCGGATTAAATTCTTaGGCAAGGCAATACTCCTTA +
Preference number: 4 (lower is better)
Translates to: NLKVDENLKVSTQHLRNISGLNS*ARQYSL
Trigger: TAAGGAGTATTGCCTTGCTCAAGAATTTAATCCGCT...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR TCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTAATTTAGAGTACAGATaGAATTTAGAGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTANLEYR*NLEPVL
Trigger: CAGGACAGGCTCTAAATTTCATCTGTACTCTAAATT...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTTCACCCCATGCTATATaGTCCATATTTAACACTCAT +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTASPHAI*SIFNTH
Trigger: ATGAGTGTTAAATATGGAGCATATAGCATGGGGTGA...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTGCAAAGAAAGGCCTGTaGCAAAAATCATCATGTTTA +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTAAKKGL*QKSSCL
Trigger: TAAACATGATGATTTTTGGCACAGGCCTTTCTTTGC...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CCA 90 bp CATCAACTGGTACTCATTTCTCTATATCTAAGACTAGAAGATTCTCTCACAGCTAGGCAATACTCCTTATaGATTCTTCCCATGTACAAT +
Preference number: 4 (lower is better)
Translates to: HQLVLISLYLRLEDSLTARQYSL*ILPMYN
Trigger: ATTGTACATGGGAAGAATCCATAAGGAGTATTGCCT...AGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR GCA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATATCACCCCATGCTATATaGTCCATATTTAACACTCAT +
Preference number: 4 (lower is better)
Translates to: NLKVDENLKVSTQHLRNISPHAI*SIFNTH
Trigger: ATGAGTGTTAAATATGGAGCATATAGCATGGGGTGA...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CCA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTAATAGTCCTTATAGCTaGGAACATGAAAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: SKILLLEIITYRLGRSIGNSPYS*EHENPL
Trigger: CAAAGGATTTTCATGTTCCCAGCTATAAGGACTATT...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
3UTR CAA 72 bp TTTAAGCTCAAAATACGAAATGAGCATAGGGTGAAGTaGATGTGTAAATGGTATTCTACAGATTCAAGATGG +
Preference number: 4 (lower is better)
Translates to: FKLKIRNEHRVK*MCKWYSTDSRW
Trigger: CCATCTTGAATCTGTAGAATACCATTTACACATCAACTTCACCCTATGCTCATTTCGTATTTTGAGCTTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
3UTR CAA 72 bp ATTATTACTAGACCTATAACTACTATACTCTCCTCTTaGGAGATTTCAGTCATCGCAGTAAGATTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IITRPITTILSS*EISVIAVRLRA
Trigger: TGCTCTTAATCTTACTGCGATGACTGAAATCTCCAAAGAGGAGAGTATAGTAGTTATAGGTCTAGTAATAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCGGAAACCATCAAAAATaGAACGTGCAGGCCGTCGTC +
Preference number: 5 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTGNHQK*NVQAVV
Trigger: GACGACGGCCTGCACGTTCAATTTTTGATGGTTTCC...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp CCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGGCAATCCTTGGTGGTTaGTGGCTGTTCCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: PVSLNPQLAILGGLWLFQAILGG*WLFQDQ
Trigger: CTGATCCTGGAACAGCCACAAACCACCAAGGATTGC...CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCTCCTTCATTTTTCGGTaGCTAGTGGCTCCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTSFIFR*LVAPSG
Trigger: ACCAGAGGGAGCCACTAGCAACCGAAAAATGAAGGA...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACATCTGGCCACACTCTTaGGCTGTTTCAAAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: ACPTLALWSYEPKCILSDIWPHS*AVSKLP
Trigger: AGGCAGCTTTGAAACAGCCAAAGAGTGTGGCCAGAT...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp CCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGAGAAAGTCCATCCAGTaGTCCATGTTCACCCAGAAA +
Preference number: 5 (lower is better)
Translates to: PVSLNPQLAILGGLWLFQRKSIQ*SMFTQK
Trigger: TTTCTGGGTGAACATGGACAACTGGATGGACTTTCT...CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp GCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTCACTTTACAAAGACAGTCTCTaGAGGACAAAGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: AGKNSKHLPIPVTTIGSLYKDSL*RTKACL
Trigger: GAGGCAGGCCTTTGTCCTCAAGAGACTGTCTTTGTA...AAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp CCAGAACTGGACATCCCAGGTGACTTCAAATGCATTGTTCAAGCCGAACTCATAGAGGTTTCCTTGAGTTaGGTCCCTCTCTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: PELDIPGDFKCIVQAELIEVSLS*VPLSAQ
Trigger: CTGTGCTGAGAGAGGGACCAAACTCAAGGAAACCTC...TATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS TCA 90 bp ACGAACTTCTTCTTCTGTGTGTGGTCTGACAGTAGAGACACTTGCTaGACTGGTACTGGGCTCTTCAGCGATTCCTCCACCATCCAAAAA +
Preference number: 5 (lower is better)
Translates to: TNFFFCVWSDSRDTC*TGTGLFSDSSTIQK
Trigger: TTTTTGGATGGTGGAGGAATCGCTGAAGAGCCCAGTACCAGTTCAGCAAGTGTCTCTACTGTCAGACCACACACAGAAGAAGAAGTTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000413584.1
ENST00000493566.1
CDS-3UTR CAA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACGGAGACTTTCTGGACTaGGCAAGATTCTCTACCTCT +
Preference number: 5 (lower is better)
Translates to: ACPTLALWSYEPKCILSDGDFLD*ARFSTS
Trigger: AGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTCC...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp CCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGACATCAGCTGTGCTTTaGGTCCATTTACATCTATCC +
Preference number: 5 (lower is better)
Translates to: PVSLNPQLAILGGLWLFQTSAVL*VHLHLS
Trigger: GGATAGATGTAAATGGACCAAAAGCACAGCTGATGT...CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCCTTGCTTGCCCAACTTaGGCTCTGTGGTCCTATGAG +
Preference number: 5 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFLACPT*ALWSYE
Trigger: CTCATAGGACCACAGAGCCAAAGTTGGGCAAGCAAG...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp ACACAATCAATGAAGACATGCCAGAACTGGACATCCCAGGTGACTTCAAATGCAAATCTAGCCATTCCTTaGCCCGAAGAGTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TQSMKTCQNWTSQVTSNANLAIP*PEESGE
Trigger: CTCCCCAGACTCTTCGGGCAAAGGAATGGCTAGATT...TGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACCGTGAGCTACAGTGCTaGCCACTTCAGTCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: ACPTLALWSYEPKCILSDRELQC*PLQSCL
Trigger: TAAACAAGACTGAAGTGGCAAGCACTGTAGCTCACG...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCTGGTCCAGCTGCCCCTaGCTCAACAATCCCAAAGAC +
Preference number: 5 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLWSSCP*LNNPKD
Trigger: GTCTTTGGGATTGTTGAGCAAGGGGCAGCTGGACCA...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS TCA 90 bp GGAGCACCAAATAATGGTTCTGGTTCCACCAGTATTTCCTGCTTTTaGGGAATTGGGGCACGAACTTCTTCTTCTGTGTGTGGTCTGACA +
Preference number: 5 (lower is better)
Translates to: GAPNNGSGSTSISCF*GIGARTSSSVCGLT
Trigger: TGTCAGACCACACACAGAAGAAGAAGTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACTGGTGGAACCAGAACCATTATTTGGTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000413584.1
CDS-3UTR CAA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACCATCAGCCACTTATTTaGCATCTGGCCACACTCTTT +
Preference number: 5 (lower is better)
Translates to: ACPTLALWSYEPKCILSDHQPLI*HLATLF
Trigger: AAAGAGTGTGGCCAGATGCAAAATAAGTGGCTGATG...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGATTCTTCACAGCTTCGTaGCTCCACACATCGCGGTTG +
Preference number: 5 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGFFTAS*LHTSRL
Trigger: CAACCGCGATGTGTGGAGCAACGAAGCTGTGAAGAA...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp TGTAAGGAGGCTCTGATGGCAGCTTCTAGCTGGCTGTCTTCACTTGCATCTATACAGAAATCCCGTCACTaGGTCCAAGAAAGAAGATAC +
Preference number: 5 (lower is better)
Translates to: CKEALMAASSWLSSLASIQKSRH*VQERRY
Trigger: GTATCTTCTTTCTTGGACCAAGTGACGGGATTTCTG...TATAGATGCAAGTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp GCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTCACTTAGAAAGTCCATCCAGTaGTCCATGTTCACCCAGAAA +
Preference number: 5 (lower is better)
Translates to: AGKNSKHLPIPVTTIGSLRKSIQ*SMFTQK
Trigger: TTTCTGGGTGAACATGGACAACTGGATGGACTTTCT...AAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCAGGAAGGTGACTTGCTaGCCCAACTTTGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLRKVTC*PNFGSV
Trigger: CACAGAGCCAAAGTTGGGCAAGCAAGTCACCTTCCT...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAGAGAAGGAAGGTGACTaGCTTGCCCAACTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGEKEGD*LAQLWL
Trigger: GAGCCAAAGTTGGGCAAGCAAGTCACCTTCCTTCTC...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCGAGAAGGAAGGTGACTaGCTTGCCCAACTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSEKEGD*LAQLWL
Trigger: GAGCCAAAGTTGGGCAAGCAAGTCACCTTCCTTCTC...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp AGTGAGCTGATGTCTTCAAAAGACTTATCGTCCCACTCCCTTCCCTCCCCCACCAAAAGCCTGGATATTTaGTTAAGCGACATTTCCACA +
Preference number: 5 (lower is better)
Translates to: SELMSSKDLSSHSLPSPTKSLDI*LSDIST
Trigger: TGTGGAAATGTCGCTTAACAAAATATCCAGGCTTTT...GGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GCTTGCCCAACTTTGGCTCTGTGGTCCTATGAGCCAAAATGCATACTTAGTGACAAAACCCACCACATCTaGTATTGTAGACATCCCAGC +
Preference number: 5 (lower is better)
Translates to: ACPTLALWSYEPKCILSDKTHHI*YCRHPS
Trigger: GCTGGGATGTCTACAATACAAGATGTGGTGGGTTTT...GTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGTTGGGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCCAGTATTTCCTGCTTTaGAGGAATTGGGGCACGAAC +
Preference number: 5 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFQYFLL*RNWGTN
Trigger: GTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACTG...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp CTTGGTCCAAGAAAGAAGATACATCTAACTGGTGCCATTCTACTAGCTTCTGACGGAAACCATCAAAAATaGAACGTGCAGGCCGTCGTC +
Preference number: 5 (lower is better)
Translates to: LGPRKKIHLTGAILLASDGNHQK*NVQAVV
Trigger: GACGACGGCCTGCACGTTCAATTTTTGATGGTTTCC...GTCAGAAGCTAGTAGAATGGCACCAGTTAGATGTATCTTCTTTCTTGGACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACACAGCTGGCAATCCTaGGTGGTTTGTGGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: TKGEKETDYRRDQEIREGHSWQS*VVCGCS
Trigger: GGAACAGCCACAAACCACCAAGGATTGCCAGCTGTG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp TTCCTTCGAGGAAAGTTGGTGAGAAGTTCAAAACGTTCATTTGGGTATCCTTTACACAGCTGGCAATCCTaGGTGGTTTGTGGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: FLRGKLVRSSKRSFGYPLHSWQS*VVCGCS
Trigger: GGAACAGCCACAAACCACCAAGGATTGCCAGCTGTG...TAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp CCAGTATCTCTGAATCCACAGCTGGCAATCCTTGGTGGTTTGTGGCTGTTCCAGTTAAAAGTTCTAGTTTaGCCACCAGAATCACGACTA +
Preference number: 5 (lower is better)
Translates to: PVSLNPQLAILGGLWLFQLKVLV*PPESRL
Trigger: TAGTCGTGATTCTGGTGGCAAAACTAGAACTTTTAA...CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATACGGGGTTTCACCATGTaGCTCAGGCTGGCCTCGATC +
Preference number: 5 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIRGFTM*LRLASI
Trigger: GATCGAGGCCAGCCTGAGCAACATGGTGAAACCCCG...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCAGGTTCAAGAGATTCTaGTGCCTCAGCCTCCCCATT +
Preference number: 5 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLRFKRF*CLSLPI
Trigger: AATGGGGAGGCTGAGGCACAAGAATCTCTTGAACCT...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCGATTCATGCCAAAGCTaGGATGGAAGCCCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLDSCQS*DGSPSK
Trigger: CTTTGAGGGGCTTCCATCCAAGCTTTGGCATGAATC...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS GCA 90 bp ACTGGGCTCTTCAGCGATTCCTCCACCATCCAAAAACATAGTGACTaGCATTTCCAGATTATTGTTGCACGCTTCAAGCATATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TGLFSDSSTIQKHSD*HFQIIVARFKHMFS
Trigger: GGAAAACATATGCTTGAAGCGTGCAACAATAATCTGGAAATGGCAGTCACTATGTTTTTGGATGGTGGAGGAATCGCTGAAGAGCCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000413584.1
ENST00000493566.1
CDS-3UTR CAA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCCCTGCTTTTGAGGAATaGGGGCACGAACTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLPAFEE*GHELLL
Trigger: AAGAAGAAGTTCGTGCCCCAATTCCTCAAAAGCAGG...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATTCTTCACAGCTTCGTaGCTCCACACATCGCGGTTG +
Preference number: 5 (lower is better)
Translates to: TKGEKETDYRRDQEIREGFFTAS*LHTSRL
Trigger: CAACCGCGATGTGTGGAGCAACGAAGCTGTGAAGAA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAAATCTAGCCATTCCTTaGCCCGAAGAGTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TKGEKETDYRRDQEIREGNLAIP*PEESGE
Trigger: CTCCCCAGACTCTTCGGGCAAAGGAATGGCTAGATT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp GCTGGCAAAAATAGCAAGCACCTTCCTATCCCAGTCACCACGATAGGTTCACTTGAGCATAGGGTGAAGTaGATGTGTAAATGGTATTCT +
Preference number: 5 (lower is better)
Translates to: AGKNSKHLPIPVTTIGSLEHRVK*MCKWYS
Trigger: AGAATACCATTTACACATCAACTTCACCCTATGCTC...AAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAGCTTCAGCTATGACTTaGCTGGAGTACAGATGGGTG +
Preference number: 5 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKASAMT*LEYRWV
Trigger: CACCCATCTGTACTCCAGCAAAGTCATAGCTGAAGC...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTACACGTTTGAGCGATTaGGGCTTCAGCTATGACTTT +
Preference number: 5 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTTRLSD*GFSYDF
Trigger: AAAGTCATAGCTGAAGCCCAAATCGCTCAAACGTGT...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCATTGACTTCACACGTTaGAGCGATTTGGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLIDFTR*SDLGFS
Trigger: GCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAAT...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAACCTGCTTTTGAGGAATaGGGGCACGAACTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKPAFEE*GHELLL
Trigger: GAGAAGAAGTTCGTGCCCCAATTCCTCAAAAGCAGG...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS TCA 90 bp ATTTCACCAAATAATGGTTCTGGTTCCACCAGTATTTCCTGCTTTTaGGGAATTGGGGCACGAACTTCTTCTTCTGTGTGTGGTCTGACA +
Preference number: 5 (lower is better)
Translates to: ISPNNGSGSTSISCF*GIGARTSSSVCGLT
Trigger: TGTCAGACCACACACAGAAGAAGAAGTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACTGGTGGAACCAGAACCATTATTTGGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493566.1
CDS-3UTR CAA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAAGCCATTTCCAGATTATaGTTGCACGCTTCAAGCATA +
Preference number: 5 (lower is better)
Translates to: LLQTARHPAECKQSNVIKAISRL*LHASSI
Trigger: TATGCTTGAAGCGTGCAACAATAATCTGGAAATGGC...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAATCTGGCCACACTCTTaGGCTGTTTCAAAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TKGEKETDYRRDQEIREGIWPHS*AVSKLP
Trigger: AGGCAGCTTTGAAACAGCCAAAGAGTGTGGCCAGAT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCCAGAAATCCCGTCACTaGGTCCAAGAAAGAAGATAC +
Preference number: 5 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSQKSRH*VQERRY
Trigger: GTATCTTCTTTCTTGGACCAAGTGACGGGATTTCTG...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTGCAATCCTTGGTGGTTaGTGGCTGTTCCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: SKILLLEIITYRLGRSIGAILGG*WLFQDQ
Trigger: CTGATCCTGGAACAGCCACAAACCACCAAGGATTGC...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCGATTCCAATTCTGATTaGCCACTCACTAGCTATGAG +
Preference number: 5 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFDSNSD*PLTSYE
Trigger: CTCATAGCTAGTGAGTGGCAAATCAGAATTGGAATC...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCAATCATCTGGGTAGCTaGATTCTCTTGCTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLNHLGS*ILLLKE
Trigger: CTCCTTCAGCAAGAGAATCAAGCTACCCAGATGATT...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAAGCAAATACCCCAAGTaGACTTCACTCAAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TKGEKETDYRRDQEIREGSKYPK*TSLKPP
Trigger: TGGGGGCTTGAGTGAAGTCAACTTGGGGTATTTGCT...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTTTTGTCCAGAATAAGTaGAGCCACAAACATCCCAGG +
Preference number: 5 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFFVQNK*SHKHPR
Trigger: CCTGGGATGTTTGTGGCTCAACTTATTCTGGACAAA...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAACATTTTAGGGAGCACTaGCCAGAAACATTACAACAG +
Preference number: 5 (lower is better)
Translates to: LLQTARHPAECKQSNVIKHFREH*PETLQQ
Trigger: CTGTTGTAATGTTTCTGGCAAGTGCTCCCTAAAATG...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TGGAACACACAATTCCTGCTGCTAGTACTAGGAGAGGTCTTATCCTTACACTTCAGCGGCTATCCTGTTTaGTCTGTGTTGAATCAAAAT +
Preference number: 5 (lower is better)
Translates to: WNTQFLLLVLGEVLSLHFSGYPV*SVLNQN
Trigger: ATTTTGATTCAACACAGACAAAACAGGATAGCCGCT...GAAGTGTAAGGATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTACAAAGGCCTGCCTCTaGCAATGTAATATCATAGTC +
Preference number: 5 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFTKACL*QCNIIV
Trigger: GACTATGATATTACATTGCAAGAGGCAGGCCTTTGT...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCACAAAGGCCTGCCTCTaGCAATGTAATATCATAGTC +
Preference number: 5 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSTKACL*QCNIIV
Trigger: GACTATGATATTACATTGCAAGAGGCAGGCCTTTGT...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp TCAAAGCTGCCTTTATGCATCAAATCAATGGGTGGCCGGAATAGATCTGCAAGGAAAAGCCTGGATATTTaGTTAAGCGACATTTCCACA +
Preference number: 5 (lower is better)
Translates to: SKLPLCIKSMGGRNRSARKSLDI*LSDIST
Trigger: TGTGGAAATGTCGCTTAACAAAATATCCAGGCTTTT...CCTTGCAGATCTATTCCGGCCACCCATTGATTTGATGCATAAAGGCAGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGACCCTCCAGTGCACCTTaGACAGTATACAGCTCTATT +
Preference number: 5 (lower is better)
Translates to: TKGEKETDYRRDQEIREGPSSAP*TVYSSI
Trigger: AATAGAGCTGTATACTGTCAAAGGTGCACTGGAGGG...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGATCACTGATGAACACGTaGGCAGTTCTCCCAACTGTT +
Preference number: 5 (lower is better)
Translates to: TKGEKETDYRRDQEIREGSLMNT*AVLPTV
Trigger: AACAGTTGGGAGAACTGCCAACGTGTTCATCAGTGA...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGACAGCGGATTAAATTCTaGAGCAAGGCAATACTCCTT +
Preference number: 5 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGQRIKF*SKAILL
Trigger: AAGGAGTATTGCCTTGCTCAAGAATTTAATCCGCTG...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTACTATACTCTCCTCTTaGGAGATTTCAGTCATCGCA +
Preference number: 5 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFTILSS*EISVIA
Trigger: TGCGATGACTGAAATCTCCAAAGAGGAGAGTATAGT...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TTGCTGCAAACAGCAAGGCATCCAGCTGAGTGTAAGCAGTCTAATGTCATCAAAATTTCCAGATTATTGTaGCACGCTTCAAGCATATGT +
Preference number: 5 (lower is better)
Translates to: LLQTARHPAECKQSNVIKISRLL*HASSIC
Trigger: ACATATGCTTGAAGCGTGCAACAATAATCTGGAAAT...TTTGATGACATTAGACTGCTTACACTCAGCTGGATGCCTTGCTGTTTGCAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp TTCCTTCGAGGAAAGTTGGTGAGAAGTTCAAAACGTTCATTTGGGTATCCTTTACATCAGCCACTTATTTaGCATCTGGCCACACTCTTT +
Preference number: 5 (lower is better)
Translates to: FLRGKLVRSSKRSFGYPLHQPLI*HLATLF
Trigger: AAAGAGTGTGGCCAGATGCAAAATAAGTGGCTGATG...TAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS-3UTR CAA 90 bp CAAACCCATGTTAGAGAATTTCTTCTCCCTGCTAAACACGGGGACTTACAAAAAACATCAGCTGTGCTTTaGGTCCATTTACATCTATCC +
Preference number: 5 (lower is better)
Translates to: QTHVREFLLPAKHGDLQKTSAVL*VHLHLS
Trigger: GGATAGATGTAAATGGACCAAAAGCACAGCTGATGT...TTTTTGTAAGTCCCCGTGTTTAGCAGGGAGAAGAAATTCTCTAACATGGGTTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp CCATTGTACTACATGATTATTGACCAGCTGCCTTCCTACAGATCACTGCAGACTTTCACCAACTCTAATTaGATTTTGGGTTTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: PLYYMIIDQLPSYRSLQTFTNSN*ILGFVG
Trigger: GCCAACAAAACCCAAAATCAAATTAGAGTTGGTGAA...AGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp TCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTGACAGTATACAGCTCCTTGCCACTTCAGTCTaGTTTAAGACTTTGCTAACT +
Preference number: 5 (lower is better)
Translates to: STTNKCFTLQCTFDSIQLLATSV*FKTLLT
Trigger: AGTTAGCAAAGTCTTAAACAAGACTGAAGTGGCAAG...GAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AGTGGTTACAATTCCAAGCCATTGTACTACATGATTATTGACCAGCTGCCTTCCATAATCCTTTCCTACTaGGGTACTGGTTATGCCTTA +
Preference number: 5 (lower is better)
Translates to: SGYNSKPLYYMIIDQLPSIILSY*GTGYAL
Trigger: TAAGGCATAACCAGTACCCAAGTAGGAAAGGATTAT...GGAAGGCAGCTGGTCAATAATCATGTAGTACAATGGCTTGGAATTGTAACCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp ACAAAGGGGGAGAAAGAGACTGATTATAGGAGAGATCAAGAAATAAGAGAAGGAGGCAATCCAGTGAAGTaGAATGTCCATAGTACACAG +
Preference number: 5 (lower is better)
Translates to: TKGEKETDYRRDQEIREGGNPVK*NVHSTQ
Trigger: CTGTGTACTATGGACATTCAACTTCACTGGATTGCC...TCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAGGAGAAACCGATATATaGGTATGGTATTCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGGETDI*VWYSLL
Trigger: CAACAGAGAATACCATACCAATATATCGGTTTCTCC...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTGTGACTTCAAATGCATaGTTCAAGCCGAACTCATAC +
Preference number: 5 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRVTSNA*FKPNSY
Trigger: GTATGAGTTCGGCTTGAACAATGCATTTGAAGTCAC...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTAGATCAGAGGTTTCCTaGAGTTTGGTCCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SKILLLEIITYRLGRSIGRSEVS*SLVPLS
Trigger: TGAGAGAGGGACCAAACTCAAGGAAACCTCTGATCT...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTCAGTATTTCCTGCTTTaGAGGAATTGGGGCACGAAC +
Preference number: 5 (lower is better)
Translates to: NITTGALSLLSSWIQSQIQYFLL*RNWGTN
Trigger: GTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACTG...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATAGGAGACTTTCTGGACTaGGCAAGATTCTCTACCTCT +
Preference number: 5 (lower is better)
Translates to: NLKVDENLKVSTQHLRNIGDFLD*ARFSTS
Trigger: AGAGGTAGAGAATCTTGCCAAGTCCAGAAAGTCTCC...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296328.9
ENST00000429160.1
CDS-3UTR CAA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTGAGCATAGGGTGAAGTaGATGTGTAAATGGTATTCT +
Preference number: 5 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLREHRVK*MCKWYS
Trigger: AGAATACCATTTACACATCAACTTCACCCTATGCTC...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GGATTTCTGAGCTTGTCTACTACCAACAAATGTTTTACCCTCCAGTGCACCTTTTTTGGATTTCTGAGCTaGTCTACTACCAACAAATGT +
Preference number: 5 (lower is better)
Translates to: GFLSLSTTNKCFTLQCTFFGFLS*STTNKC
Trigger: ACATTTGTTGGTAGTAGACAAGCTCAGAAATCCAAA...AAAGGTGCACTGGAGGGTAAAACATTTGTTGGTAGTAGACAAGCTCAGAAATCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GGTCCTATGAGCCAAAATGCATACTTAGTGACATGTATCTCACAGGAAAAGGGAATACTATACTATGCATaGGATTTGTACCTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: GPMSQNAYLVTCISQEKGILYYA*DLYLGR
Trigger: TCTACCCAGGTACAAATCCAATGCATAGTATAGTAT...TCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp GTTTTACAAAGACTACTAATTCATCAGCCTGCACCCCATGATTTACTACTGCGTTTAAAAGTTCTAGTTTaGCCACCAGAATCACGACTA +
Preference number: 5 (lower is better)
Translates to: VLQRLLIHQPAPHDLLLRLKVLV*PPESRL
Trigger: TAGTCGTGATTCTGGTGGCAAAACTAGAACTTTTAA...ACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTTCTCATTTGGCACTGTaGTTTTCTCTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: NITTGALSLLSSWIQSQISHLAL*FSLLQF
Trigger: GAACTGGAGAAGAGAAAACAACAGTGCCAAATGAGA...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTAGCGGCTATCCTGTTTaGTCTGTGTTGAATCAAAAT +
Preference number: 5 (lower is better)
Translates to: NITTGALSLLSSWIQSQISGYPV*SVLNQN
Trigger: ATTTTGATTCAACACAGACAAAACAGGATAGCCGCT...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AGCAAGATCCTCCTTCTGGAAATTATTACCTATAGACTAGGTAGATCTATAGGTTTCACCAACTCTAATTaGATTTTGGGTTTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: SKILLLEIITYRLGRSIGFTNSN*ILGFVG
Trigger: GCCAACAAAACCCAAAATCAAATTAGAGTTGGTGAA...ACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTTACTGTAAAATCATGTaGCTGCAAACAGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: NITTGALSLLSSWIQSQIYCKIM*LQTARH
Trigger: ATGCCTTGCTGTTTGCAGCAACATGATTTTACAGTA...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AATCTTAAAGTAGATGAAAACCTAAAGGTCTCTACGCAACATCTGAGGAACATACTGTTCTTTTCTCATTaGGCACTGTTGTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: NLKVDENLKVSTQHLRNILFFSH*ALLFSL
Trigger: AAGAGAAAACAACAGTGCCAAATGAGAAAAGAACAG...TATGTTCCTCAGATGTTGCGTAGAGACCTTTAGGTTTTCATCTACTTTAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS-3UTR CAA 90 bp AACATTACAACAGGAGCACTGTCTCTGTTATCTTCTTGGATTCAATCACAAATTTACTATGCATTGGATTaGTACCTGGGTAGAGAAATT +
Preference number: 5 (lower is better)
Translates to: NITTGALSLLSSWIQSQIYYALD*YLGREI
Trigger: AATTTCTCTACCCAGGTACAAATCCAATGCATAGTA...AATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296328.9
CDS CCA 72 bp AACCCCTTCAGCGCCGAGGACGCCGCGGAGCCCCCGTaGGCAGCCATCTTACCGCCGCCGCCGCCGCCGAAC +
Preference number: 6 (lower is better)
Translates to: NPFSAEDAAEPP*AAILPPPPPPN
Trigger: GTTCGGCGGCGGCGGCGGCGGTAAGATGGCTGCCCACGGGGGCTCCGCGGCGTCCTCGGCGCTGAAGGGGTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296328.9
ENST00000428095.1
ENST00000429160.1
ENST00000493566.1
CDS TCA 72 bp GGCCACACTCTTTGGCCGGTAATGGTGGTGAACTGTTaGATTAACCCCTTCAGCGCCGAGGACGCCGCGGAG +
Preference number: 6 (lower is better)
Translates to: GHTLWPVMVVNC*INPFSAEDAAE
Trigger: CTCCGCGGCGTCCTCGGCGCTGAAGGGGTTAATTCAACAGTTCACCACCATTACCGGCCAAAGAGTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428095.1
CDS TCA 72 bp GGCACGAACTTCTTCTCGGTAATGGTGGTGAACTGTTaGATTAACCCCTTCAGCGCCGAGGACGCCGCGGAG +
Preference number: 6 (lower is better)
Translates to: GTNFFSVMVVNC*INPFSAEDAAE
Trigger: CTCCGCGGCGTCCTCGGCGCTGAAGGGGTTAATTCAACAGTTCACCACCATTACCGAGAAGAAGTTCGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS TCA 72 bp GCCAAGGCCAAGGCCAAGGCAGGCAGGAAGCTTGCTTaGGATCAGTTCCATAGCAGCCAGGGCAAACAGCAA +
Preference number: 6 (lower is better)
Translates to: AKAKAKAGRKLA*DQFHSSQGKQQ
Trigger: TTGCTGTTTGCCCTGGCTGCTATGGAACTGATCTCAAGCAAGCTTCCTGCCTGCCTTGGCCTTGGCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493566.1
CDS TCA 72 bp ACACTTTCACTTGCACCGGTAATGGTGGTGAACTGTTaGATTAACCCCTTCAGCGCCGAGGACGCCGCGGAG +
Preference number: 6 (lower is better)
Translates to: TLSLAPVMVVNC*INPFSAEDAAE
Trigger: CTCCGCGGCGTCCTCGGCGCTGAAGGGGTTAATTCAACAGTTCACCACCATTACCGGTGCAAGTGAAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000493566.1
CDS TCA 72 bp TTCTTCTGTGTGTGGTCTGACAGTAGAGACACTTGCTaGACTGGTACTGGGCTCTTCAGCGATTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: FFCVWSDSRDTC*TGTGLFSDSST
Trigger: GGTGGAGGAATCGCTGAAGAGCCCAGTACCAGTTCAGCAAGTGTCTCTACTGTCAGACCACACACAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000413584.1
ENST00000493566.1
CDS CCA 72 bp TTCTGGTTCCACCAGTATTTCCTGCTTTTGAGGAATTaGGGCACGAACTTCTTCTTCTGTGTGTGGTCTGAC +
Preference number: 6 (lower is better)
Translates to: FWFHQYFLLLRN*GTNFFFCVWSD
Trigger: GTCAGACCACACACAGAAGAAGAAGTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACTGGTGGAACCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000413584.1
ENST00000493566.1
CDS CCA 72 bp TTCTGGTTCCACCAGTATTTCCTGCTTTTGAGGAATTaGGGCACGAACTTCTTCTCGGTAATGGTGGTGAAC +
Preference number: 6 (lower is better)
Translates to: FWFHQYFLLLRN*GTNFFSVMVVN
Trigger: GTTCACCACCATTACCGAGAAGAAGTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACTGGTGGAACCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS CAA 72 bp GTTCTGGTTCCACCAGTATTTCCTGCTTTTGAGGAATaGGGGCACGAACTTCTTCTCGGTAATGGTGGTGAA +
Preference number: 6 (lower is better)
Translates to: VLVPPVFPAFEE*GHELLLGNGGE
Trigger: TTCACCACCATTACCGAGAAGAAGTTCGTGCCCCAATTCCTCAAAAGCAGGAAATACTGGTGGAACCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429160.1
CDS CAA 90 bp CCTCCACCATCCAAAAACATAGTGACTGCCATTTCCAGATTATTGTaGCACGCTTCAAGCATATGTTTTCCTACACTTTCACTTGCACCG +
Preference number: 6 (lower is better)
Translates to: PPPSKNIVTAISRLL*HASSICFPTLSLAP
Trigger: CGGTGCAAGTGAAAGTGTAGGAAAACATATGCTTGAAGCGTGCAACAATAATCTGGAAATGGCAGTCACTATGTTTTTGGATGGTGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000493566.1
CDS GCA 72 bp TTCAGCGATTCCTCCACCATCCAAAAACATAGTGACTaGCATTTCCAGATTATTGTTGCACGCTTCAAGCAT +
Preference number: 6 (lower is better)
Translates to: FSDSSTIQKHSD*HFQIIVARFKH
Trigger: ATGCTTGAAGCGTGCAACAATAATCTGGAAATGGCAGTCACTATGTTTTTGGATGGTGGAGGAATCGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000413584.1
ENST00000493566.1
CDS CAA 90 bp CCTCCACCATCCAAAAACATAGTGACTGCCATTTCCAGATTATTGTaGCACGCTTCAAGCATATGTTTTCCTACACTTTCACTTGCACCT +
Preference number: 6 (lower is better)
Translates to: PPPSKNIVTAISRLL*HASSICFPTLSLAP
Trigger: AGGTGCAAGTGAAAGTGTAGGAAAACATATGCTTGAAGCGTGCAACAATAATCTGGAAATGGCAGTCACTATGTTTTTGGATGGTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413584.1
CDS CAA 90 bp ATTCCTCCACCATCCAAAAACATAGTGACTGCCATTTCCAGATTATaGTTGCACGCTTCAAGCATATGTTTTCCTACACTTTCACTTGCA +
Preference number: 6 (lower is better)
Translates to: IPPPSKNIVTAISRL*LHASSICFPTLSLA
Trigger: TGCAAGTGAAAGTGTAGGAAAACATATGCTTGAAGCGTGCAACAATAATCTGGAAATGGCAGTCACTATGTTTTTGGATGGTGGAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000413584.1
ENST00000493566.1
CDS CAA 72 bp CCATCCAAAAACATAGTGACTGCCATTTCCAGATTATaGTTGCACGCTTCAAGCATATGTTTTCCTACACTT +
Preference number: 6 (lower is better)
Translates to: PSKNIVTAISRL*LHASSICFPTL
Trigger: AAGTGTAGGAAAACATATGCTTGAAGCGTGCAACAATAATCTGGAAATGGCAGTCACTATGTTTTTGGATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296328.9
ENST00000381887.7
ENST00000413584.1
ENST00000493566.1