RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBXN6 (Homo sapiens)

Ensembl gene IDs: ENSG00000167671

Ensembl transcript IDs: ENST00000301281.11, ENST00000394765.7, ENST00000587009.5, ENST00000587324.1, ENST00000588238.1, ENST00000590466.2, ENST00000591919.5, ENST00000592358.1, ENST00000592515.1, ENST00000593024.1

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCCCAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATaGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: GPNSTAPRLAPLPCP*GRAKYFQRWLGGPG
Trigger: CCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR TCA 90 bp GGAGCTCGGGTTTCAGGATGGAGTCCGGCTCGGCCCCCGCGGCCTTaGTGTCCTCCAGCACAGCCATGTCCCACGAGAAGGTCAGGAGGG +
Preference number: 1 (lower is better)
Translates to: GARVSGWSPARPPRP*CPPAQPCPTRRSGG
Trigger: CCCTCCTGACCTTCTCGTGGGACATGGCTGTGCTGGAGGACATCAAGGCCGCGGGGGCCGAGCCGGACTCCATCCTGAAACCCGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590466.2
3UTR GCA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTaGTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCT +
Preference number: 1 (lower is better)
Translates to: HCHPRHTGTGPMLQA*SPAQGDATCVCPAA
Trigger: AGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR TCA 90 bp GCTGAGGCCAACCCTGCTTTTATTTCACAAGAGCTTCTCGATGGCTaGCAGGAGCTCGGGTTTCAGGATGGAGTCCGGCTCGGCCCCCGC +
Preference number: 1 (lower is better)
Translates to: AEANPAFISQELLDG*QELGFQDGVRLGPR
Trigger: GCGGGGGCCGAGCCGGACTCCATCCTGAAACCCGAGCTCCTGTCAGCCATCGAGAAGCTCTTGTGAAATAAAAGCAGGGTTGGCCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590466.2
3UTR TCA 90 bp TCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATaGCACAGTTACCAAGCAGCTAGGGAGGGCTTAGATTTGTTGGTG +
Preference number: 1 (lower is better)
Translates to: SPAQGDATCVCPAAS*HSYQAAREGLDLLV
Trigger: CACCAACAAATCTAAGCCCTCCCTAGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR GCA 90 bp CTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCTGGCGCCCCTCCCGTaGCCATGGGGCAGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: LPPTAHGNRTHAAGLLSCLAPLP*PWGRAK
Trigger: CTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG...GCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR GCA 90 bp TCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATCTGGCGCCCCTCCCGTaGCCATGGGGCAGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: STAPRLAPLPCPWGRAKYLAPLP*PWGRAK
Trigger: CTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG...ATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp GGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCACAGCTCCACGGCTaGCGCCCCTCCCGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: GTREQDPCCRPALLPREMPQLHG*RPSRAH
Trigger: ATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGG...CATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR GCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCACTGGCGCCCCTCCCGTaGCCATGGGGCAGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGALAPLP*PWGRAK
Trigger: CTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR GCA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCAGGTGCAGCCACTaGCACCCACGGCACACGGGA +
Preference number: 2 (lower is better)
Translates to: HCHPRHTGTGPMLQACSPARCSH*HPRHTG
Trigger: TCCCGTGTGCCGTGGGTGGCAGTGGCTGCACCTGGC...AGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCACAGCTCCACGGCTaGCGCCCCTCCCGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASPQLHG*RPSRAH
Trigger: ATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGG...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCACAGCTCCACGGCTaGCGCCCCTCCCGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRIPQLHG*RPSRAH
Trigger: ATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGG...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR GCA 90 bp CACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCTCCTCGGACAGCTTCTaGCCTCCCGAGGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: HTGTGPMLQACSPAQGDASSDSF*PPEASS
Trigger: GCTGCTGGCCTCGGGAGGGCAGAAGCTGTCCGAGGA...GGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590466.2
3UTR-3UTR CCA 90 bp GGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGTTTCCAGAGGTGGCTTaGAGGCCCTGGGGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: GTREQDPCCRPALLPREMFPEVA*RPWGGG
Trigger: CCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAA...CATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR TCA 90 bp CAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCGGAACAGGGAGAGCATaGGACAGACCCACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: QLHGWRPSRAHGAEPSISGTGRA*DRPTGL
Trigger: CAGCCCTGTGGGTCTGTCTCATGCTCTCCCTGTTCC...GGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR GCA 90 bp GGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCCATGCTGCAGGCCTaGTCTCCTGCCCAGGGAGAT +
Preference number: 2 (lower is better)
Translates to: GTREQDPCCRPALLPREMPMLQA*SPAQGD
Trigger: ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGG...CATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR GCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCAAGCCCTAGTGCCAGGTaGAGCCACTGCCACCCACGG +
Preference number: 2 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGASPSAR*SHCHPR
Trigger: CCGTGGGTGGCAGTGGCTGCACCTGGCACTAGGGCT...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp CCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCACCCCTCCCGTGCCCATaGGGCAGAGCCAAGTATTTC +
Preference number: 2 (lower is better)
Translates to: PPTAHGNRTHAAGLLSCPPLPCP*GRAKYF
Trigger: GAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGG...TGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR TCA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGGAACAGGGAGAGCATaGGACAGACCCACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: HCHPRHTGTGPMLQACSPGTGRA*DRPTGL
Trigger: CAGCCCTGTGGGTCTGTCTCATGCTCTCCCTGTTCC...AGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR TCA 90 bp CGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGGAGCTTCTCGATGGCTaGCAGGAGCTCGGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: RLAPLPCPWGRAKYFQRWELLDG*QELGFQ
Trigger: CTGAAACCCGAGCTCCTGTCAGCCATCGAGAAGCTC...CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590466.2
3UTR-3UTR GCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCGAACAGGACCCATGCTaGAGGCCTGCTCTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRIEQDPC*RPALLP
Trigger: GGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTC...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR GCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCACGGGAACAGGACCCATaGTGCAGGCCTGCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGAREQDP*CRPALL
Trigger: CAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCG...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCCCACAGCTCCACGGCTaGCGCCCCTCCCGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTPQLHG*RPSRAH
Trigger: ATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGG...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCTCTCCCTCGGGGGCTTaGGCGCATCCCCACAGCCCC +
Preference number: 2 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTSPSGA*AHPHSP
Trigger: GGGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGA...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp GCTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACATTTCCAGAGGTGGCTTaGAGGCCCTGGGGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: ALLPREMPRVSVRQLHDTFPEVA*RPWGGG
Trigger: CCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAA...TGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCACCCCTCCCGTGCCCATaGGGCAGAGCCAAGTATTTC +
Preference number: 2 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGAPLPCP*GRAKYF
Trigger: GAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGG...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR TCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGACAGACCCACAGGGCTaGGGCCAACCCTGCTTTTAT +
Preference number: 2 (lower is better)
Translates to: STAGAPPVPMGQSQVFPETDPQG*GQPCFY
Trigger: ATAAAAGCAGGGTTGGCCTCAGCCCTGTGGGTCTGT...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR TCA 90 bp CACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGTGTCCGGCAGCTTCATaGCACAGTTACCAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: HPRHTGTGPMLQACSPAQCPAAS*HSYQAA
Trigger: AGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACA...CTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR TCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCAACAGACCCACAGGGCTaGGGCCAACCCTGCTTTTAT +
Preference number: 2 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGATDPQG*GQPCFY
Trigger: ATAAAAGCAGGGTTGGCCTCAGCCCTGTGGGTCTGT...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR TCA 90 bp CTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGGGAACAGGGAGAGCATaGGACAGACCCACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LSCPGRCHVCLSGSFMTQGTGRA*DRPTGL
Trigger: CAGCCCTGTGGGTCTGTCTCATGCTCTCCCTGTTCC...CTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CCA 90 bp TCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTATTTCCAGAGGTGGCTTaGAGGCCCTGGGGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: SCPGRCHVCLSGSFMTQLFPEVA*RPWGGG
Trigger: CCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAA...TAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR TCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATGTCCGGCAGCTTCATaGCACAGTTACCAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGACPAAS*HSYQAA
Trigger: AGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACA...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CAA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCCTCTCCCTCGGGGGCTaGGGCGCATCCCCACAGCCC +
Preference number: 3 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLLSLGG*GASPQP
Trigger: GGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGAG...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CAA 90 bp CGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATCTCTCCCTCGGGGGCTaGGGCGCATCCCCACAGCCC +
Preference number: 3 (lower is better)
Translates to: RHTGTGPMLQACSPAQGDLSLGG*GASPQP
Trigger: GGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGAG...ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CAA 90 bp CTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTCTCTCCCTCGGGGGCTaGGGCGCATCCCCACAGCCC +
Preference number: 3 (lower is better)
Translates to: LLPREMPRVSVRQLHDTVLSLGG*GASPQP
Trigger: GGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGAG...AACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR GCA 72 bp CCCAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTaGCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: PNSTAPRLAPLP*PWGRAKYFQRW
Trigger: CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR GCA 72 bp CCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTaGTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: PRHTGTGPMLQA*SPAQGDATCVC
Trigger: ACAGACACACGTGGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR GCA 72 bp CATCCACAGAGCAGCCCTAGTGCCAGGTGCAGCCACTaGCACCCACGGCACACGGGAACAGGACCCATGCTG +
Preference number: 3 (lower is better)
Translates to: HPQSSPSARCSH*HPRHTGTGPML
Trigger: CAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTGCACCTGGCACTAGGGCTGCTCTGTGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR CCA 72 bp TCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATaGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGA +
Preference number: 3 (lower is better)
Translates to: STAPRLAPLPCP*GRAKYFQRWLG
Trigger: TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CAA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGAGGGAGGGCTTAGATTaGTTGGTGTCCCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: RPSRAHGAEPSISRGGLEREGLD*LVSPGL
Trigger: GAGGCCTGGGGACACCAACAAATCTAAGCCCTCCCT...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR-3UTR CAA 90 bp TCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTAAGGGAGGGCTTAGATTaGTTGGTGTCCCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: SCPGRCHVCLSGSFMTQLREGLD*LVSPGL
Trigger: GAGGCCTGGGGACACCAACAAATCTAAGCCCTCCCT...TAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR TCA 72 bp CAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATaGCACAGTTACCAAGCAGCTAGGGAGGGCTTAGAT +
Preference number: 3 (lower is better)
Translates to: QGDATCVCPAAS*HSYQAAREGLD
Trigger: ATCTAAGCCCTCCCTAGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
3UTR CCA 72 bp GGCCAACCCTGCTTTTATTTCACAAGAGCTTCTCGATaGCTGACAGGAGCTCGGGTTTCAGGATGGAGTCCG +
Preference number: 3 (lower is better)
Translates to: GQPCFYFTRASR*LTGARVSGWSP
Trigger: CGGACTCCATCCTGAAACCCGAGCTCCTGTCAGCCATCGAGAAGCTCTTGTGAAATAAAAGCAGGGTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590466.2
3UTR TCA 72 bp AACCCTGCTTTTATTTCACAAGAGCTTCTCGATGGCTaGCAGGAGCTCGGGTTTCAGGATGGAGTCCGGCTC +
Preference number: 3 (lower is better)
Translates to: NPAFISQELLDG*QELGFQDGVRL
Trigger: GAGCCGGACTCCATCCTGAAACCCGAGCTCCTGTCAGCCATCGAGAAGCTCTTGTGAAATAAAAGCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590466.2
CDS-3UTR CCA 90 bp GCCCAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCTCTCCCTCGGGGGCTTaGGCGCATCCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: AQFHSSTAGAPPVPMGQSSPSGA*AHPHSP
Trigger: GGGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGA...GCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCGCCAGGGGCGAGGGCTaGAAGACGCGGCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ATATHGTREQDPCCRPALARGEG*KTRRCL
Trigger: CAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGC...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCCCCCAGGCCCGGGACTaGTTCTGCTCCAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLPQARD*FCSSRA
Trigger: AGCCCGGCTGGAGCAGAAGCAGTCCCGGGCCTGGGG...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp GCCCAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCTCCTCGGACAGCTTCTaGCCTCCCGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AQFHSSTAGAPPVPMGQSSSDSF*PPEASS
Trigger: GCTGCTGGCCTCGGGAGGGCAGAAGCTGTCCGAGGA...GCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCCTGGCGCCCCTCCCGTaGCCATGGGGCAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QLHGWRPSRAHGAEPSISLAPLP*PWGRAK
Trigger: CTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG...GGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTGGCGCCCCTCCCGTaGCCATGGGGCAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RLAPLPCPWGRAKYFQRWLAPLP*PWGRAK
Trigger: CTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG...CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCACTGGCGCCCCTCCCGTaGCCATGGGGCAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PPTAHGNRTHAAGLLSCPLAPLP*PWGRAK
Trigger: CTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG...TGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCGCTGCCTGTCCAGCTTaGCGCGCACGGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLAACPA*RARAPQ
Trigger: CTGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGC...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGGCTGCCTGTCCAGCTTaGCGCGCACGGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RLAPLPCPWGRAKYFQRWAACPA*RARAPQ
Trigger: CTGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGC...CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGGCCAGGGGCGAGGGCTaGAAGACGCGGCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GTREQDPCCRPALLPREMARGEG*KTRRCL
Trigger: CAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGC...CATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAATCTCCCTCGGGGGCTTaGGCGCATCCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQSPSGA*AHPHSP
Trigger: GGGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGA...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGTGGAAGACGCGGCGCTaGCTGTCCAGCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: RLAPLPCPWGRAKYFQRWWKTRR*LSSLAR
Trigger: GCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCA...CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCGGCAGCCAGTCGCTCTaGAGGGCCTCCCGGACGAAC +
Preference number: 4 (lower is better)
Translates to: LPPTAHGNRTHAAGLLSCGSQSL*RASRTN
Trigger: GTTCGTCCGGGAGGCCCTGCAGAGCGACTGGCTGCC...GCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp TGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCGGCAGCCAGTCGCTCTaGAGGGCCTCCCGGACGAAC +
Preference number: 4 (lower is better)
Translates to: CHPRHTGTGPMLQACSPAGSQSL*RASRTN
Trigger: GTTCGTCCGGGAGGCCCTGCAGAGCGACTGGCTGCC...GGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGGCAGCCAGTCGCTCTaGAGGGCCTCCCGGACGAAC +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQGSQSL*RASRTN
Trigger: GTTCGTCCGGGAGGCCCTGCAGAGCGACTGGCTGCC...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCGCCAGGTGCAGCCACTaGCACCCACGGCACACGGGA +
Preference number: 4 (lower is better)
Translates to: ATATHGTREQDPCCRPALARCSH*HPRHTG
Trigger: TCCCGTGTGCCGTGGGTGGCAGTGGCTGCACCTGGC...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCTGGTGTCCTGCGATGTaGGGCCCCAGGCCCGGGACT +
Preference number: 4 (lower is better)
Translates to: ATATHGTREQDPCCRPALWCPAM*GPRPGT
Trigger: AGTCCCGGGCCTGGGGCCCCACATCGCAGGACACCA...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTACCACGTTGGTCCCTaGGGCCTCGGGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLYHVGP*GLGAPA
Trigger: AGCGGGAGCCCCGAGGCCCCAGGGACCAACGTGGTA...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp GGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGGCTGCCTGTCCAGCTTaGCGCGCACGGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GTREQDPCCRPALLPREMAACPA*RARAPQ
Trigger: CTGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGC...CATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCAGGGGCGAGGGCTaGAAGACGCGGCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RPSRAHGAEPSISRGGLEARGEG*KTRRCL
Trigger: CAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGC...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp TGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCGCTCGGGTTTCAGGATaGAGTCCGGCTCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: CHPRHTGTGPMLQACSPAARVSG*SPARPP
Trigger: CGGGGGCCGAGCCGGACTCCATCCTGAAACCCGAGC...GGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGCTCGGGTTTCAGGATaGAGTCCGGCTCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: HPRHTGTGPMLQACSPAQARVSG*SPARPP
Trigger: CGGGGGCCGAGCCGGACTCCATCCTGAAACCCGAGC...CTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCCCACAGCTCCACGGCTaGCGCCCCTCCCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: HTGTGPMLQACSPAQGDAPQLHG*RPSRAH
Trigger: ATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGG...GGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp TGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGTCTCCCTCGGGGGCTTaGGCGCATCCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: WGRAKYFQRWLGGPGVAGSPSGA*AHPHSP
Trigger: GGGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGA...CCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAACCCCCACGGACTCTTTaGGCTTCTGACCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQPPRTL*ASDRVP
Trigger: CGGGACCCGGTCAGAAGCTCAAAGAGTCCGTGGGGG...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301281.11
CDS-3UTR TCA 90 bp CACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCCCTCGGGGCTCCCGCTaGCGGTGGCTTCGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: HTGTGPMLQACSPAQGDAPRGSR*RWLRLE
Trigger: TTCAAGCCGAAGCCACCGTCAGCGGGAGCCCCGAGG...GGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp GGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCTCGGGGCTCCCGCTaGCGGTGGCTTCGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: GTREQDPCCRPALLPREMPRGSR*RWLRLE
Trigger: TTCAAGCCGAAGCCACCGTCAGCGGGAGCCCCGAGG...CATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCGCCCGGGACTGCTTCTaGTCCAGCCGGGCTAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASARDCF*SSRARA
Trigger: CGCCCTAGCCCGGCTGGAGCAGAAGCAGTCCCGGGC...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGGCCCGGGACTGCTTCTaGTCCAGCCGGGCTAGGGCG +
Preference number: 4 (lower is better)
Translates to: QSQVFPEVAWRPWGGGERARDCF*SSRARA
Trigger: CGCCCTAGCCCGGCTGGAGCAGAAGCAGTCCCGGGC...CCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCCCCCAGGCCCGGGACTaGTTCTGCTCCAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LRFVGVPRPLPRGLGRIPPQARD*FCSSRA
Trigger: AGCCCGGCTGGAGCAGAAGCAGTCCCGGGCCTGGGG...GGGGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAG
68% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp TGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGTGGAAGACGCGGCGCTaGCTGTCCAGCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: WGRAKYFQRWLGGPGVAGWKTRR*LSSLAR
Trigger: GCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCA...CCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTTGCGCAGCCCCCGCTaGTCCTCCTTCTCCCGCATG +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLLRSPR*SSFSRM
Trigger: CATGCGGGAGAAGGAGGAGCAGCGGGGGCTGCGCAA...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGGCAGCCAGTCGCTCTaGAGGGCCTCCCGGACGAAC +
Preference number: 4 (lower is better)
Translates to: HCHPRHTGTGPMLQACSPGSQSL*RASRTN
Trigger: GTTCGTCCGGGAGGCCCTGCAGAGCGACTGGCTGCC...AGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAATCCTCGGACAGCTTCTaGCCTCCCGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQSSDSF*PPEASS
Trigger: GCTGCTGGCCTCGGGAGGGCAGAAGCTGTCCGAGGA...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCGCAGGCCTGCTCTCCTaGCCAGGGAGATGCCACGTG +
Preference number: 4 (lower is better)
Translates to: QLHGWRPSRAHGAEPSISAGLLS*PGRCHV
Trigger: CACGTGGCATCTCCCTGGGCAGGAGAGCAGGCCTGC...GGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGCCAGGTGCAGCCACTaGCACCCACGGCACACGGGA +
Preference number: 4 (lower is better)
Translates to: STAGAPPVPMGQSQVFPEARCSH*HPRHTG
Trigger: TCCCGTGTGCCGTGGGTGGCAGTGGCTGCACCTGGC...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp TCTCGATGGCTGACAGGAGCTCGGGTTTCAGGATGGAGTCCGGCTCGGCCCCCGGCCAGGTGCAGCCACTaGCACCCACGGCACACGGGA +
Preference number: 4 (lower is better)
Translates to: SRWLTGARVSGWSPARPPARCSH*HPRHTG
Trigger: TCCCGTGTGCCGTGGGTGGCAGTGGCTGCACCTGGC...CGGGGGCCGAGCCGGACTCCATCCTGAAACCCGAGCTCCTGTCAGCCATCGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590466.2
CDS-3UTR CCA 90 bp CACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGCCATCTGTGCCTCATTaGTGGGTCCCTGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: HPRHTGTGPMLQACSPAQPSVPH*WVPGGA
Trigger: CGCCCCGCCAGGGACCCACCAATGAGGCACAGATGG...CTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATTACCACGTTGGTCCCTaGGGCCTCGGGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RHTGTGPMLQACSPAQGDYHVGP*GLGAPA
Trigger: AGCGGGAGCCCCGAGGCCCCAGGGACCAACGTGGTA...ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAATGCAGGCGTCCCGCTaGTCCTTCCTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQMQASR*SFLRVA
Trigger: GGCCACCCTGAGGAAGGACCAGCGGGACGCCTGCAT...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCCTCCTTCTCCCGCATaGCCTTGGTCCGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: ATATHGTREQDPCCRPALPPSPA*PWSAAR
Trigger: GCGTGCTGCGGACCAAGGCCATGCGGGAGAAGGAGG...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGGCTCGGGTTTCAGGATaGAGTCCGGCTCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GTREQDPCCRPALLPREMARVSG*SPARPP
Trigger: CGGGGGCCGAGCCGGACTCCATCCTGAAACCCGAGC...CATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGCCACAGCTCCACGGCTaGCGCCCCTCCCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RPSRAHGAEPSISRGGLEPQLHG*RPSRAH
Trigger: ATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGG...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCAGTGCACGTTGGTCCCTaGGGCCTCGGGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGAVHVGP*GLGAPA
Trigger: AGCGGGAGCCCCGAGGCCCCAGGGACCAACGTGCAC...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591919.5
CDS-3UTR TCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCTCGGGGCTCCCGCTaGCGGTGGCTTCGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRIPRGSR*RWLRLE
Trigger: TTCAAGCCGAAGCCACCGTCAGCGGGAGCCCCGAGG...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGTCCTCGGGGTCCTCCTaGTCCTGGGCGGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: STAGAPPVPMGQSQVFPESSGSS*SWAGSN
Trigger: GTTGCTTCCCGCCCAGGATCAGGAGGACCCCGAGGA...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTTCCTCGGGGTCCTCCTaGTCCTGGGCGGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: HCHPRHTGTGPMLQACSPSSGSS*SWAGSN
Trigger: GTTGCTTCCCGCCCAGGATCAGGAGGACCCCGAGGA...AGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAATTTCGGATGGTGTCCTaGGATGTGGGGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQFRMVS*DVGPQA
Trigger: GGCCTGGGGCCCCACATCGCAGGACACCATCCGAAA...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCGCAGGCCTGCTCTCCTaGCCAGGGAGATGCCACGTG +
Preference number: 4 (lower is better)
Translates to: HTGTGPMLQACSPAQGDAAGLLS*PGRCHV
Trigger: CACGTGGCATCTCCCTGGGCAGGAGAGCAGGCCTGC...GGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp TGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCGAACAGGACCCATGCTaGAGGCCTGCTCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CHPRHTGTGPMLQACSPAEQDPC*RPALLP
Trigger: GGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTC...GGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGAACAGGACCCATGCTaGAGGCCTGCTCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQEQDPC*RPALLP
Trigger: GGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTC...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGCCAGGTGCAGCCACTaGCACCCACGGCACACGGGA +
Preference number: 4 (lower is better)
Translates to: LAPLPCPWGRAKYFQRWLARCSH*HPRHTG
Trigger: TCCCGTGTGCCGTGGGTGGCAGTGGCTGCACCTGGC...AAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCTCTGTGCCTCATTGGTaGGTCCCTGGCGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRISVPHW*VPGGAA
Trigger: GGCCGCCCCGCCAGGGACCCACCAATGAGGCACAGA...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp TGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGCCATCTGTGCCTCATTaGTGGGTCCCTGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: WGRAKYFQRWLGGPGVAGPSVPH*WVPGGA
Trigger: CGCCCCGCCAGGGACCCACCAATGAGGCACAGATGG...CCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCTGGTGTCCTGCGATGTaGGGCCCCAGGCCCGGGACT +
Preference number: 4 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASWCPAM*GPRPGT
Trigger: AGTCCCGGGCCTGGGGCCCCACATCGCAGGACACCA...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGGGGGCTGGGCCAAGGTaGTCTCGCTCAGCACGTAGA +
Preference number: 4 (lower is better)
Translates to: RLAPLPCPWGRAKYFQRWGAGPR*SRSARR
Trigger: TCTACGTGCTGAGCGAGACCACCTTGGCCCAGCCCC...CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGGCCAGGGGCGAGGGCTaGAAGACGCGGCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSCPGRCHVCLSGSFMTQARGEG*KTRRCL
Trigger: CAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGC...CTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGTCTCCCGCATGGCCTTaGTCCGCAGCACGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: STAGAPPVPMGQSQVFPESPAWP*SAARSA
Trigger: GGCTGAGCGTGCTGCGGACCAAGGCCATGCGGGAGA...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGGCTCGGGTTTCAGGATaGAGTCCGGCTCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: QSQVFPEVAWRPWGGGERARVSG*SPARPP
Trigger: CGGGGGCCGAGCCGGACTCCATCCTGAAACCCGAGC...CCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGATTTCCAGAGGTGGCTTaGAGGCCCTGGGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LHGWRPSRAHGAEPSISRFPEVA*RPWGGG
Trigger: CCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAA...TCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp AGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGATCTCCCTCGGGGGCTTaGGCGCATCCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: RAKYFQRWLGGPGVAGRGSPSGA*AHPHSP
Trigger: GGGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGA...TCCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCACGGCCACTGGGTCGGTaGAGAAGTGCACGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PPTAHGNRTHAAGLLSCPRPLGR*RSARWS
Trigger: GGACCAACGTGCACTTCTCCACCGACCCAGTGGCCG...TGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591919.5
CDS-3UTR TCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGACTCTTTGAGCTTCTaGCCGGGTCCCGCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQDSLSF*PGPALL
Trigger: CAAGAGCGCGGGACCCGGTCAGAAGCTCAAAGAGTC...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301281.11
CDS-3UTR TCA 90 bp GCCCAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCACGGTGGCTTCGGCTTaGAGTTCCTTTCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: AQFHSSTAGAPPVPMGQSTVASA*SSFLTW
Trigger: CCAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGT...GCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCTCCTCGGGGTCCTCCTaGTCCTGGGCGGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRISSGSS*SWAGSN
Trigger: GTTGCTTCCCGCCCAGGATCAGGAGGACCCCGAGGA...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp TGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCGGAACAGGGAGAGCATaGGACAGACCCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CHPRHTGTGPMLQACSPAGTGRA*DRPTGL
Trigger: CAGCCCTGTGGGTCTGTCTCATGCTCTCCCTGTTCC...GGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAAGCGGCTGCCATCTGTaGCTCATTGGTGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQSGCHL*LIGGSL
Trigger: CAGGGACCCACCAATGAGGCACAGATGGCAGCCGCT...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp GCCCAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCGGGTCGGTGGAGAAGTaGAAGAGAATGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AQFHSSTAGAPPVPMGQSGSVEK*KRMASL
Trigger: CAAGGAGGCCATTCTCTTGCACTTCTCCACCGACCC...GCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR GCA 90 bp CTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTTTGCGCAGCCCCCGCTaGTCCTCCTTCTCCCGCATG +
Preference number: 4 (lower is better)
Translates to: LAPLPCPWGRAKYFQRWLLRSPR*SSFSRM
Trigger: CATGCGGGAGAAGGAGGAGCAGCGGGGGCTGCGCAA...AAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCTCCTCGGACAGCTTCTaGCCTCCCGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASSSDSF*PPEASS
Trigger: GCTGCTGGCCTCGGGAGGGCAGAAGCTGTCCGAGGA...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCTCCTCGGACAGCTTCTaGCCTCCCGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRFVGVPRPLPRGLGRIPSSDSF*PPEASS
Trigger: GCTGCTGGCCTCGGGAGGGCAGAAGCTGTCCGAGGA...GGGGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp GCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGCAGGCCTGCTCTCCTaGCCAGGGAGATGCCACGTG +
Preference number: 4 (lower is better)
Translates to: APLPCPWGRAKYFQRWLGAGLLS*PGRCHV
Trigger: CACGTGGCATCTCCCTGGGCAGGAGAGCAGGCCTGC...TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGCCCATGCTGCAGGCCTaGTCTCCTGCCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: STAGAPPVPMGQSQVFPEPMLQA*SPAQGD
Trigger: ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGG...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTCCCATGCTGCAGGCCTaGTCTCCTGCCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: HCHPRHTGTGPMLQACSPPMLQA*SPAQGD
Trigger: ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGG...AGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATCCCATGCTGCAGGCCTaGTCTCCTGCCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RHTGTGPMLQACSPAQGDPMLQA*SPAQGD
Trigger: ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGG...ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGAACAGGACCCATGCTaGAGGCCTGCTCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: STAGAPPVPMGQSQVFPEEQDPC*RPALLP
Trigger: GGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTC...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGCGGGAACAGGACCCATaGTGCAGGCCTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: STAGAPPVPMGQSQVFPEREQDP*CRPALL
Trigger: CAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCG...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGACGGGAACAGGACCCATaGTGCAGGCCTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LHGWRPSRAHGAEPSISRREQDP*CRPALL
Trigger: CAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCG...TCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCAGCCCTAGTGCCAGGTaGAGCCACTGCCACCCACGG +
Preference number: 4 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASSPSAR*SHCHPR
Trigger: CCGTGGGTGGCAGTGGCTGCACCTGGCACTAGGGCT...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCAGCCCTAGTGCCAGGTaGAGCCACTGCCACCCACGG +
Preference number: 4 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRISPSAR*SHCHPR
Trigger: CCGTGGGTGGCAGTGGCTGCACCTGGCACTAGGGCT...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCCCGCACTCGTTCAAGGCCAGGTTCTCGTCCTCGGACAGCTTCTGCCCTCCAGCCCTAGTGCCAGGTaGAGCCACTGCCACCCACGG +
Preference number: 4 (lower is better)
Translates to: QPALVQGQVLVLGQLLPSSPSAR*SHCHPR
Trigger: CCGTGGGTGGCAGTGGCTGCACCTGGCACTAGGGCT...GGAGGGCAGAAGCTGTCCGAGGACGAGAACCTGGCCTTGAACGAGTGCGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590466.2
CDS-3UTR GCA 90 bp CGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGGCCAGCATCCCCTCCTaGCGTTGTCACCCACATCCA +
Preference number: 4 (lower is better)
Translates to: RLAPLPCPWGRAKYFQRWASIPS*RCHPHP
Trigger: TGGATGTGGGTGACAACGGCAGGAGGGGATGCTGGC...CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCGGGCGGCCTGGGGGCTaGCTGGTTGGGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASGRPGG*LVGLLF
Trigger: AAAGAGAAGCCCAACCAGCCAGCCCCCAGGCCGCCC...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAATGCAGGCGTCCCGCTaGTCCTTCCTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: APLPCPWGRAKYFQRWLGMQASR*SFLRVA
Trigger: GGCCACCCTGAGGAAGGACCAGCGGGACGCCTGCAT...TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp CTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGGGCTGGGCCAAGGTaGTCTCGCTCAGCACGTAGA +
Preference number: 4 (lower is better)
Translates to: LHGWRPSRAHGAEPSISRGAGPR*SRSARR
Trigger: TCTACGTGCTGAGCGAGACCACCTTGGCCCAGCCCC...TCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGTCTCCCGCATGGCCTTaGTCCGCAGCACGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RPSRAHGAEPSISRGGLESPAWP*SAARSA
Trigger: GGCTGAGCGTGCTGCGGACCAAGGCCATGCGGGAGA...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCACCTCCTTCTCCCGCATaGCCTTGGTCCGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGAPPSPA*PWSAAR
Trigger: GCGTGCTGCGGACCAAGGCCATGCGGGAGAAGGAGG...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GTTCAAGGCCAGGTTCTCGTCCTCGGACAGCTTCTGCCCTCCCGAGGCCAGCAGTTTCCAGAGGTGGCTTaGAGGCCCTGGGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: VQGQVLVLGQLLPSRGQQFPEVA*RPWGGG
Trigger: CCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAA...CTGCTGGCCTCGGGAGGGCAGAAGCTGTCCGAGGACGAGAACCTGGCCTTGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590466.2
CDS-3UTR CCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCCCCCTCCCGTGCCCATaGGGCAGAGCCAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLPLPCP*GRAKYF
Trigger: GAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGG...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGTGGAGAAGTGCACGTTaGTCCCTGGGGCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: QSQVFPEVAWRPWGGGERWRSAR*SLGPRG
Trigger: GCCCCGAGGCCCCAGGGACCAACGTGCACTTCTCCA...CCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCTTCTCCTCCTCGGGGTaGAGGTGGATGTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLHGWRPSRAHGAEPSISFSSSG*RWMLSR
Trigger: CCTGGACAACATCCACCTGCACCCCGAGGAGGAGAA...GGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCTTCTCCTCCTCGGGGTaGAGGTGGATGTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ATATHGTREQDPCCRPALFSSSG*RWMLSR
Trigger: CCTGGACAACATCCACCTGCACCCCGAGGAGGAGAA...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCGGACCTGAGCCTCTaGTCCCGCTTGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLSDLSL*SRLISS
Trigger: AGAGGAGATCAAGCGGGAGCAGAGGCTCAGGTCCGA...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp AGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGAGCAGGCCTGCTCTCCTaGCCAGGGAGATGCCACGTG +
Preference number: 4 (lower is better)
Translates to: RAKYFQRWLGGPGVAGRGAGLLS*PGRCHV
Trigger: CACGTGGCATCTCCCTGGGCAGGAGAGCAGGCCTGC...TCCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCGGGAACAGGACCCATaGTGCAGGCCTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRIREQDP*CRPALL
Trigger: CAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCG...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGCCAGCATCCCCTCCTaGCGTTGTCACCCACATCCA +
Preference number: 4 (lower is better)
Translates to: STAGAPPVPMGQSQVFPEASIPS*RCHPHP
Trigger: TGGATGTGGGTGACAACGGCAGGAGGGGATGCTGGC...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp TGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCGAAAGAATTTCTTCATaGTGGCGGCTGGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: CHPRHTGTGPMLQACSPAERISS*WRLARR
Trigger: CCGCCGGGCCAGCCGCCACCATGAAGAAATTCTTTC...GGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301281.11
CDS-3UTR CCA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTCCATCTGTGCCTCATTaGTGGGTCCCTGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPPSVPH*WVPGGA
Trigger: CGCCCCGCCAGGGACCCACCAATGAGGCACAGATGG...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GCTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACATGGTGTCCTGCGATGTaGGGCCCCAGGCCCGGGACT +
Preference number: 4 (lower is better)
Translates to: ALLPREMPRVSVRQLHDTWCPAM*GPRPGT
Trigger: AGTCCCGGGCCTGGGGCCCCACATCGCAGGACACCA...TGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp TGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGGATGGAGGCGGCCACTaGGTCGGTGGAGAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: WGRAKYFQRWLGGPGVAGDGGGH*VGGEVQ
Trigger: TTGCACTTCTCCACCGACCCAGTGGCCGCCTCCATC...CCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGATGGAGGCGGCCACTaGGTCGGTGGAGAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: HCHPRHTGTGPMLQACSPDGGGH*VGGEVQ
Trigger: TTGCACTTCTCCACCGACCCAGTGGCCGCCTCCATC...AGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTTCTCCCGCATGGCCTTaGTCCGCAGCACGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPSPAWP*SAARSA
Trigger: GGCTGAGCGTGCTGCGGACCAAGGCCATGCGGGAGA...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCCCCCTCCCGTGCCCATaGGGCAGAGCCAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: HTGTGPMLQACSPAQGDAPLPCP*GRAKYF
Trigger: GAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGG...GGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp TCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGCCCCTCCCGTGCCCATaGGGCAGAGCCAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: STAGAPPVPMGQSQVFPEPLPCP*GRAKYF
Trigger: GAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGG...CTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGGATGGAGGCGGCCACTaGGTCGGTGGAGAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: QSQVFPEVAWRPWGGGERDGGGH*VGGEVH
Trigger: GTGCACTTCTCCACCGACCCAGTGGCCGCCTCCATC...CCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591919.5
CDS-3UTR TCA 90 bp CTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCACGGTGGCTTCGGCTTaGAGTTCCTTTCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LPPTAHGNRTHAAGLLSCTVASA*SSFLTW
Trigger: CCAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGT...GCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCACGTGTAGATCTTCATaGTGGAGGCGGCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: ATATHGTREQDPCCRPALTCRSS*WRRPLG
Trigger: ACCCAGTGGCCGCCTCCATCATGAAGATCTACACGT...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGAGCTTCTCGATGGCTaGCAGGAGCTCGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RHTGTGPMLQACSPAQGDELLDG*QELGFQ
Trigger: CTGAAACCCGAGCTCCTGTCAGCCATCGAGAAGCTC...ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp CACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGACAGACCCACAGGGCTaGGGCCAACCCTGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: HPRHTGTGPMLQACSPAQTDPQG*GQPCFY
Trigger: ATAAAAGCAGGGTTGGCCTCAGCCCTGTGGGTCTGT...CTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp CCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAACAGACCCACAGGGCTaGGGCCAACCCTGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: PPTAHGNRTHAAGLLSCPTDPQG*GQPCFY
Trigger: ATAAAAGCAGGGTTGGCCTCAGCCCTGTGGGTCTGT...TGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCAGGAACAGGGAGAGCATaGGACAGACCCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGAGTGRA*DRPTGL
Trigger: CAGCCCTGTGGGTCTGTCTCATGCTCTCCCTGTTCC...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp GCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGAACAGGGAGAGCATaGGACAGACCCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: APLPCPWGRAKYFQRWLGGTGRA*DRPTGL
Trigger: CAGCCCTGTGGGTCTGTCTCATGCTCTCCCTGTTCC...TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGAGCGGCTGCCATCTGTaGCTCATTGGTGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QSQVFPEVAWRPWGGGERSGCHL*LIGGSL
Trigger: CAGGGACCCACCAATGAGGCACAGATGGCAGCCGCT...CCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGAGCGGCTGCCATCTGTaGCTCATTGGTGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RPSRAHGAEPSISRGGLESGCHL*LIGGSL
Trigger: CAGGGACCCACCAATGAGGCACAGATGGCAGCCGCT...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp GGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCCCCCAGGCCCGGGACTaGTTCTGCTCCAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GRCHVCLSGSFMTQLPSSPQARD*FCSSRA
Trigger: AGCCCGGCTGGAGCAGAAGCAGTCCCGGGCCTGGGG...GCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTTTTCGGATGGTGTCCTaGGATGTGGGGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPFRMVS*DVGPQA
Trigger: GGCCTGGGGCCCCACATCGCAGGACACCATCCGAAA...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGATTCTCCTCCTCGGGGTaGAGGTGGATGTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LHGWRPSRAHGAEPSISRFSSSG*RWMLSR
Trigger: CCTGGACAACATCCACCTGCACCCCGAGGAGGAGAA...TCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCTGGAAGACGCGGCGCTaGCTGTCCAGCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTWKTRR*LSSLAR
Trigger: GCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCA...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGCGTGTAGTTGTACTTaGGCAGCCCCCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LAPLPCPWGRAKYFQRWLACSCT*AAPAAP
Trigger: AGGAGCAGCGGGGGCTGCGCAAGTACAACTACACGC...AAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp AGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGAGAACAGGACCCATGCTaGAGGCCTGCTCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RAKYFQRWLGGPGVAGRGEQDPC*RPALLP
Trigger: GGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTC...TCCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTCGGGAACAGGACCCATaGTGCAGGCCTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPREQDP*CRPALL
Trigger: CAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCG...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGCCAGCATCCCCTCCTaGCGTTGTCACCCACATCCA +
Preference number: 4 (lower is better)
Translates to: LAPLPCPWGRAKYFQRWLASIPS*RCHPHP
Trigger: TGGATGTGGGTGACAACGGCAGGAGGGGATGCTGGC...AAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCAACTGCAGGTCTATGTaGAGGAAGGCCAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLNCRSM*RKASIP
Trigger: GGGGATGCTGGCCTTCCTGCACATAGACCTGCAGTT...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAAGTGCCTGAGCCTCTaGTCCCGCTTGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QLHGWRPSRAHGAEPSISKCLSL*SRLISS
Trigger: AGAGGAGATCAAGCGGGAGCAGAGGCTCAGGCACTT...GGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590466.2
CDS-3UTR CCA 90 bp GCTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGGGCGGCCTGGGGGCTaGCTGGTTGGGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ALLPREMPRVSVRQLHDTGRPGG*LVGLLF
Trigger: AAAGAGAAGCCCAACCAGCCAGCCCCCAGGCCGCCC...TGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCTCACCTGGTTTCGGATaGTGTCCTGCGATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HTGTGPMLQACSPAQGDASPGFG*CPAMWG
Trigger: GCCCCACATCGCAGGACACCATCCGAAACCAGGTGA...GGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGCAGAGCCTTCCTCTCTaGGCTCAGATACCACGTTGG +
Preference number: 4 (lower is better)
Translates to: HPRHTGTGPMLQACSPAQQSLPL*AQIPRW
Trigger: CCAACGTGGTATCTGAGCCCAGAGAGGAAGGCTCTG...CTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp CTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTTCCAGAGGTGGCTTaGAGGCCCTGGGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LSCPGRCHVCLSGSFMTQFPEVA*RPWGGG
Trigger: CCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAA...CTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp GGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCCCACAGCTCCACGGCTaGCGCCCCTCCCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GRCHVCLSGSFMTQLPSSPQLHG*RPSRAH
Trigger: ATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGG...GCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCGAGCTTCTCGATGGCTaGCAGGAGCTCGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASELLDG*QELGFQ
Trigger: CTGAAACCCGAGCTCCTGTCAGCCATCGAGAAGCTC...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp CTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCTGTCCGGCAGCTTCATaGCACAGTTACCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPPTAHGNRTHAAGLLSCCPAAS*HSYQAA
Trigger: AGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACA...GCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGCGTGTAGTTGTACTTaGGCAGCCCCCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPACSCT*AAPAAP
Trigger: AGGAGCAGCGGGGGCTGCGCAAGTACAACTACACGC...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTAGCCCTAGTGCCAGGTaGAGCCACTGCCACCCACGG +
Preference number: 4 (lower is better)
Translates to: LLPREMPRVSVRQLHDTVSPSAR*SHCHPR
Trigger: CCGTGGGTGGCAGTGGCTGCACCTGGCACTAGGGCT...AACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCGGGCGGCCTGGGGGCTaGCTGGTTGGGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTGRPGG*LVGLLF
Trigger: AAAGAGAAGCCCAACCAGCCAGCCCCCAGGCCGCCC...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCTCACCTGGTTTCGGATaGTGTCCTGCGATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASSPGFG*CPAMWG
Trigger: GCCCCACATCGCAGGACACCATCCGAAACCAGGTGA...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTCGGCCACTGGGTCGGTaGAGAAGTGCAAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: LAPLPCPWGRAKYFQRWLRPLGR*RSAREW
Trigger: CCATTCTCTTGCACTTCTCCACCGACCCAGTGGCCG...AAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCCCTCCTTCTCCCGCATaGCCTTGGTCCGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTPPSPA*PWSAAR
Trigger: GCGTGCTGCGGACCAAGGCCATGCGGGAGAAGGAGG...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAACAAGAGCTTCTCGATaGCTGACAGGAGCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: PPTAHGNRTHAAGLLSCPTRASR*LTGARV
Trigger: AACCCGAGCTCCTGTCAGCCATCGAGAAGCTCTTGT...TGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGACAAGAGCTTCTCGATaGCTGACAGGAGCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: HPRHTGTGPMLQACSPAQTRASR*LTGARV
Trigger: AACCCGAGCTCCTGTCAGCCATCGAGAAGCTCTTGT...CTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp CAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAACAAGAGCTTCTCGATaGCTGACAGGAGCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: QFHSSTAGAPPVPMGQSQTRASR*LTGARV
Trigger: AACCCGAGCTCCTGTCAGCCATCGAGAAGCTCTTGT...TTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp GCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAACGTGTAGATCTTCATaGTGGAGGCGGCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: APLPCPWGRAKYFQRWLGTCRSS*WRRPLG
Trigger: ACCCAGTGGCCGCCTCCATCATGAAGATCTACACGT...TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCACAGACCCACAGGGCTaGGGCCAACCCTGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LRFVGVPRPLPRGLGRIPTDPQG*GQPCFY
Trigger: ATAAAAGCAGGGTTGGCCTCAGCCCTGTGGGTCTGT...GGGGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCTTTCGGATGGTGTCCTaGGATGTGGGGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTFRMVS*DVGPQA
Trigger: GGCCTGGGGCCCCACATCGCAGGACACCATCCGAAA...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTTCGGACCTGAGCCTCTaGTCCCGCTTGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPSDLSL*SRLISS
Trigger: AGAGGAGATCAAGCGGGAGCAGAGGCTCAGGTCCGA...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCTAGGGAGGGCTTTGCGCAGCCCCCGCTaGTCCTCCTTCTCCCGCATG +
Preference number: 4 (lower is better)
Translates to: RVSVRQLHDTVTKQLGRALRSPR*SSFSRM
Trigger: CATGCGGGAGAAGGAGGAGCAGCGGGGGCTGCGCAA...AGCCCTCCCTAGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGAGTTCCTTTCTCACCTaGTTTCGGATGGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLAPLPCPWGRAKYFQRWSSFLT*FRMVSC
Trigger: GCAGGACACCATCCGAAACCAGGTGAGAAAGGAACT...CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCTGTTGTCCAGGTACTTaGCAATGGTGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: ATATHGTREQDPCCRPALCCPGT*QWCPHP
Trigger: TGGGTGTGGACACCATTGCCAAGTACCTGGACAACA...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGTGTTGTCCAGGTACTTaGCAATGGTGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: RLAPLPCPWGRAKYFQRWCCPGT*QWCPHP
Trigger: TGGGTGTGGACACCATTGCCAAGTACCTGGACAACA...CCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCTCCTCGGGGTGCAGGTaGATGTTGTCCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LRFVGVPRPLPRGLGRIPSSGCR*MLSRYL
Trigger: CAAGTACCTGGACAACATCCACCTGCACCCCGAGGA...GGGGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCGGGGCTGGGCCAAGGTaGTCTCGCTCAGCACGTAGA +
Preference number: 4 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTGAGPR*SRSARR
Trigger: TCTACGTGCTGAGCGAGACCACCTTGGCCCAGCCCC...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGATTGGGCTTCTCTTTGTaGGCCTTTTCCGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LHGWRPSRAHGAEPSISRLGFSL*AFSGLC
Trigger: ACACAGCCCGGAAAAGGCCCACAAAGAGAAGCCCAA...TCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394765.7
CDS-3UTR TCA 90 bp CTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGACCTTGTTCTGCAGCTTaGTCTTCCGGTACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LHGWRPSRAHGAEPSISRPCSAA*SSGTSP
Trigger: AGGAGAAGTACCGGAAGATCAAGCTGCAGAACAAGG...TCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTCCTTGTTCTGCAGCTTaGTCTTCCGGTACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HCHPRHTGTGPMLQACSPPCSAA*SSGTSP
Trigger: AGGAGAAGTACCGGAAGATCAAGCTGCAGAACAAGG...AGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGTGTCCGGCAGCTTCATaGCACAGTTACCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPSRAHGAEPSISRGGLECPAAS*HSYQAA
Trigger: AGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACA...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp GCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGATGTCCGGCAGCTTCATaGCACAGTTACCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: APLPCPWGRAKYFQRWLGCPAAS*HSYQAA
Trigger: AGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACA...TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTGCGTGTAGTTGTACTTaGGCAGCCCCCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLPREMPRVSVRQLHDTVACSCT*AAPAAP
Trigger: AGGAGCAGCGGGGGCTGCGCAAGTACAACTACACGC...AACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATAGTTCCTTTCTCACCTaGTTTCGGATGGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RHTGTGPMLQACSPAQGDSSFLT*FRMVSC
Trigger: GCAGGACACCATCCGAAACCAGGTGAGAAAGGAACT...ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGCCAGTTCCTTTCTCACCTaGTTTCGGATGGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HTGTGPMLQACSPAQGDASSFLT*FRMVSC
Trigger: GCAGGACACCATCCGAAACCAGGTGAGAAAGGAACT...GGCATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp AGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGACAGAGCCTTCCTCTCTaGGCTCAGATACCACGTTGG +
Preference number: 4 (lower is better)
Translates to: RAKYFQRWLGGPGVAGRGQSLPL*AQIPRW
Trigger: CCAACGTGGTATCTGAGCCCAGAGAGGAAGGCTCTG...TCCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCAGGTACTTGGCAATaGTGTCCACACCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRIPGTWQ*CPHPAS
Trigger: TGAAGCTGGGTGTGGACACCATTGCCAAGTACCTGG...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGCCAGGTACTTGGCAATaGTGTCCACACCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RPSRAHGAEPSISRGGLEPGTWQ*CPHPAS
Trigger: TGAAGCTGGGTGTGGACACCATTGCCAAGTACCTGG...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTTCCTCGGGGTGCAGGTaGATGTTGTCCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPSSGCR*MLSRYL
Trigger: CAAGTACCTGGACAACATCCACCTGCACCCCGAGGA...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCGGAAGCAACACCTTCTaGAACCCAATGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLGSNTF*NPMASK
Trigger: TTTTGAGGCCATTGGGTTCCAGAAGGTGTTGCTTCC...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCGGAAGCAACACCTTCTaGAACCCAATGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: ATATHGTREQDPCCRPALGSNTF*NPMASK
Trigger: TTTTGAGGCCATTGGGTTCCAGAAGGTGTTGCTTCC...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGCCTTGTTCTGCAGCTTaGTCTTCCGGTACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QSQVFPEVAWRPWGGGERPCSAA*SSGTSP
Trigger: AGGAGAAGTACCGGAAGATCAAGCTGCAGAACAAGG...CCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp GGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCAGTTAATGCGCTCCTaGAACACCTTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLRFVGVPRPLPRGLGRIQLMRS*NTLFCS
Trigger: GCTGCAGAACAAGGTGTTTCAGGAGCGCATTAACTG...GATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGGGGTCGGTGGAGAAGTaGAAGAGAATGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSCPGRCHVCLSGSFMTQGSVEK*KRMASL
Trigger: CAAGGAGGCCATTCTCTTGCACTTCTCCACCGACCC...CTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR GCA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGCCGCTTGATCTCCTCTaGTGTGAGGTTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RPSRAHGAEPSISRGGLEPLDLL*CEVEEV
Trigger: GACTTCTTCAACCTCACAGCAGAGGAGATCAAGCGG...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCGCTTGATCTCCTCTaGTGTGAGGTTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASPLDLL*CEVEEV
Trigger: GACTTCTTCAACCTCACAGCAGAGGAGATCAAGCGG...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCACCGCTTGATCTCCTCTaGTGTGAGGTTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGAPLDLL*CEVEEV
Trigger: GACTTCTTCAACCTCACAGCAGAGGAGATCAAGCGG...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTTCGGACCTGAGCCTCTaGTCCCGCTTGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLPREMPRVSVRQLHDTVSDLSL*SRLISS
Trigger: AGAGGAGATCAAGCGGGAGCAGAGGCTCAGGTCCGA...AACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGATGTTGTCCAGGTACTTaGCAATGGTGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: APLPCPWGRAKYFQRWLGCCPGT*QWCPHP
Trigger: TGGGTGTGGACACCATTGCCAAGTACCTGGACAACA...TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp AGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGAACAAGAGCTTCTCGATaGCTGACAGGAGCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: RAKYFQRWLGGPGVAGRGTRASR*LTGARV
Trigger: AACCCGAGCTCCTGTCAGCCATCGAGAAGCTCTTGT...TCCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR TCA 90 bp CTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACGTGTAGATCTTCATaGTGGAGGCGGCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LLPREMPRVSVRQLHDTVTCRSS*WRRPLG
Trigger: ACCCAGTGGCCGCCTCCATCATGAAGATCTACACGT...AACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTCAGTTAATGCGCTCCTaGAACACCTTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPQLMRS*NTLFCS
Trigger: GCTGCAGAACAAGGTGTTTCAGGAGCGCATTAACTG...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp GGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCGAGCTTCTCGATGGCTaGCAGGAGCTCGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GRCHVCLSGSFMTQLPSSELLDG*QELGFQ
Trigger: CTGAAACCCGAGCTCCTGTCAGCCATCGAGAAGCTC...GCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAACTGCAGGTCTATGTaGAGGAAGGCCAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTNCRSM*RKASIP
Trigger: GGGGATGCTGGCCTTCCTGCACATAGACCTGCAGTT...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp GGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCCGGCCACTGGGTCGGTaGAGAAGTGCAAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: GRCHVCLSGSFMTQLPSSRPLGR*RSAREW
Trigger: CCATTCTCTTGCACTTCTCCACCGACCCAGTGGCCG...GCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCTCCTCGGGGTGCAGGTaGATGTTGTCCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTSSGCR*MLSRYL
Trigger: CAAGTACCTGGACAACATCCACCTGCACCCCGAGGA...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CCA 90 bp TGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGTCTATTAAAACCTTCTaGGAGGCCAGGCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: WGRAKYFQRWLGGPGVAGSIKTF*EARLSV
Trigger: AACTGAGAGCCTGGCCTCCCAGAAGGTTTTAATAGA...CCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394765.7
CDS-3UTR TCA 90 bp CGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCTAGGGAGGGCTACGGTGGCTTCGGCTTaGAGTTCCTTTCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: RVSVRQLHDTVTKQLGRATVASA*SSFLTW
Trigger: CCAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGT...AGCCCTCCCTAGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGCAGTTAATGCGCTCCTaGAACACCTTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSCPGRCHVCLSGSFMTQQLMRS*NTLFCS
Trigger: GCTGCAGAACAAGGTGTTTCAGGAGCGCATTAACTG...CTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCTAGGGAGGGCTACAGACCCACAGGGCTaGGGCCAACCCTGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: RVSVRQLHDTVTKQLGRATDPQG*GQPCFY
Trigger: ATAAAAGCAGGGTTGGCCTCAGCCCTGTGGGTCTGT...AGCCCTCCCTAGCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR GCA 90 bp GGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCAACTGCAGGTCTATGTaGAGGAAGGCCAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: GRCHVCLSGSFMTQLPSSNCRSM*RKASIP
Trigger: GGGGATGCTGGCCTTCCTGCACATAGACCTGCAGTT...GCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCGTTTATTTGGGCTTATaGTTTACTAACTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLVYLGL*FTNCRS
Trigger: AGACCTGCAGTTAGTAAATCATAAGCCCAAATAAAC...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR TCA 90 bp TCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATGTTTATTTGGGCTTATaGTTTACTAACTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: STAPRLAPLPCPWGRAKYVYLGL*FTNCRS
Trigger: AGACCTGCAGTTAGTAAATCATAAGCCCAAATAAAC...ATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCCCGCTTGATCTCCTCTaGTGTGAGGTTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTPLDLL*CEVEEV
Trigger: GACTTCTTCAACCTCACAGCAGAGGAGATCAAGCGG...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CCA 90 bp TCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAGGTACTTGGCAATaGTGTCCACACCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SCPGRCHVCLSGSFMTQLPGTWQ*CPHPAS
Trigger: TGAAGCTGGGTGTGGACACCATTGCCAAGTACCTGG...TAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR GCA 90 bp CAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGCTGTGTCAATTTCTGTaGCGTAGGTCTATTAAAACC +
Preference number: 4 (lower is better)
Translates to: QSQVFPEVAWRPWGGGERLCQFL*RRSIKT
Trigger: GGTTTTAATAGACCTACGGCACAGAAATTGACACAG...CCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394765.7
CDS-3UTR TCA 90 bp TCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTAGTTTATTTGGGCTTATaGTTTACTAACTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SCPGRCHVCLSGSFMTQLVYLGL*FTNCRS
Trigger: AGACCTGCAGTTAGTAAATCATAAGCCCAAATAAAC...TAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS GCA 90 bp GCCAGAGCTGAAGGGCCGCAGTGCCAGCAGGGGGCTCCTGCGGGGTaGTCCCTCGGCGTTGGCGGGCAGCGTGGACCTCCAGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: ARAEGPQCQQGAPAG*SLGVGGQRGPPGLP
Trigger: GGGCAGGCCTGGAGGTCCACGCTGCCCGCCAACGCCGAGGGAGCACCCCGCAGGAGCCCCCTGCTGGCACTGCGGCCCTTCAGCTCTGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587009.5
ENST00000588238.1
ENST00000592358.1
CDS GCA 90 bp CAGGGCCCCCTACCAACCCGAGCCGCCCTCCACGGGCATCGTTGGTaGCCACCCTGCAGGAGGCAGCCATCGGGGAGGCGCACGCGCAGC +
Preference number: 5 (lower is better)
Translates to: QGPLPTRAALHGHRW*PPCRRQPSGRRTRS
Trigger: GCTGCGCGTGCGCCTCCCCGATGGCTGCCTCCTGCAGGGTGGGCACCAACGATGCCCGTGGAGGGCGGCTCGGGTTGGTAGGGGGCCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
CDS CCA 90 bp GCTCCAGCCGGGCTAGGGCGGCAGCGGCTGCCATCTGTGCCTCATTaGTGGGTCCCTGGCGGGGCGGCCTGGGGGCTGGCTGGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: APAGLGRQRLPSVPH*WVPGGAAWGLAGWA
Trigger: AGCCCAACCAGCCAGCCCCCAGGCCGCCCCGCCAGGGACCCACCAATGAGGCACAGATGGCAGCCGCTGCCGCCCTAGCCCGGCTGGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS CCA 90 bp CCAGCCGGGCTAGGGCGGCAGCGGCTGCCATCTGTGCCTCATTGGTaGGTCCCTGGCGGGGCGGCCTGGGGGCTGGCTGGTTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PAGLGRQRLPSVPHW*VPGGAAWGLAGWAS
Trigger: AGAAGCCCAACCAGCCAGCCCCCAGGCCGCCCCGCCAGGGACCCACCAATGAGGCACAGATGGCAGCCGCTGCCGCCCTAGCCCGGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS GCA 90 bp TGGCCTTGGTCCGCAGCACGCTCAGCCGCTCCACCGCCTCGGACCTaGACACGCGGGCCAGGTCACGAGGGCTGGCCGGGGTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: WPWSAARSAAPPPRT*TRGPGHEGWPGFFH
Trigger: GTGGAAGAACCCCGGCCAGCCCTCGTGACCTGGCCCGCGTGTGCAGGTCCGAGGCGGTGGAGCGGCTGAGCGTGCTGCGGACCAAGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 90 bp GGCAGGGAACTCAGCGGGCAACCTGGGCGCGGGGATGCCCCGGCCTaGAAGCCATCTCAGCTGGTGGAGGCTGTGGCTCGCACCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GRELSGQPGRGDAPA*KPSQLVEAVARTQA
Trigger: GGCCTGGGTGCGAGCCACAGCCTCCACCAGCTGAGATGGCTTCCAGGCCGGGGCATCCCCGCGCCCAGGTTGCCCGCTGAGTTCCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 90 bp CGGATGGTGTCCTGCGATGTGGGGCCCCAGGCCCGGGACTGCTTCTaGTCCAGCCGGGCTAGGGCGGCAGCGGCTGCCATCTGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: RMVSCDVGPQARDCF*SSRARAAAAAICAS
Trigger: TGAGGCACAGATGGCAGCCGCTGCCGCCCTAGCCCGGCTGGAGCAGAAGCAGTCCCGGGCCTGGGGCCCCACATCGCAGGACACCATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS GCA 90 bp AGTTCGAACTGCGAGGCCAGGGGCGAGGGCTGGAAGACGCGGCGCTaGCTGTCCAGCTTGGCGCGCACGGGCTCCGCAGCCAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SSNCEARGEGWKTRR*LSSLARTGSAASSC
Trigger: ACAGCTGCTGGCTGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGCCTCGCAGTTCGAACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000591919.5
CDS CCA 90 bp AGGCCAGGGGCGAGGGCTGGAAGACGCGGCGCTGCCTGTCCAGCTTaGCGCGCACGGGCTCCGCAGCCAGCAGCTGTTCCTTGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: RPGARAGRRGAACPA*RARAPQPAAVPCAS
Trigger: AGAGGCACAAGGAACAGCTGCTGGCTGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000591919.5
CDS-3UTR CAA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCCGCTGCCTGTCCAGCTaGGCGCGCACGGGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLRCLSS*ARTGSA
Trigger: TGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGCG...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCCTCTCCCTCGGGGGCTaGGGCGCATCCCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: QLHGWRPSRAHGAEPSISLSLGG*GASPQP
Trigger: GGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGAG...GGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp GCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTCTCCCTCGGGGGCTaGGGCGCATCCCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: ATATHGTREQDPCCRPALLSLGG*GASPQP
Trigger: GGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGAG...GAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS TCA 90 bp GTCAGGAGGGCAGAGGGCACCTGCGGTAGGGGTAGGCCGTCACTCTaGGACCGAGAGTCGGCCCTTGCCGCGGCAGGGAACTCAGCGGGC +
Preference number: 5 (lower is better)
Translates to: VRRAEGTCGRGRPSL*DRESALAAAGNSAG
Trigger: GCCCGCTGAGTTCCCTGCCGCGGCAAGGGCCGACTCTCGGTCTCAGAGTGACGGCCTACCCCTACCGCAGGTGCCCTCTGCCCTCCTGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 90 bp TTCTGCCCTCCCGAGGCCAGCAGCTCAAAAGGCAGCCAGTCGCTCTaGAGGGCCTCCCGGACGAACCCGTACACCGCCCCCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: FCPPEASSSKGSQSL*RASRTNPYTAPSRS
Trigger: GGAGCGGCTGGGGGCGGTGTACGGGTTCGTCCGGGAGGCCCTGCAGAGCGACTGGCTGCCTTTTGAGCTGCTGGCCTCGGGAGGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000590466.2
ENST00000591919.5
CDS CCA 90 bp AAGAAGTCCCCAGGCAGTTCGAACTGCGAGGCCAGGGGCGAGGGCTaGAAGACGCGGCGCTGCCTGTCCAGCTTGGCGCGCACGGGCTCC +
Preference number: 5 (lower is better)
Translates to: KKSPGSSNCEARGEG*KTRRCLSSLARTGS
Trigger: GGAGCCCGTGCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGCCTCGCAGTTCGAACTGCCTGGGGACTTCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000591919.5
CDS GCA 90 bp TGGTTTCGGATGGTGTCCTGCGATGTGGGGCCCCAGGCCCGGGACTaGTTCTGCTCCAGCCGGGCTAGGGCGGCAGCGGCTGCCATCTGT +
Preference number: 5 (lower is better)
Translates to: WFRMVSCDVGPQARD*FCSSRARAAAAAIC
Trigger: ACAGATGGCAGCCGCTGCCGCCCTAGCCCGGCTGGAGCAGAAGCAGTCCCGGGCCTGGGGCCCCACATCGCAGGACACCATCCGAAACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS GCA 90 bp GGCAGCCATCGGGGAGGCGCACGCGCAGCAGCGTGTAGTTGTACTTaGGCAGCCCCCGCTGCTCCTCCTTCTCCCGCATGGCCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: GSHRGGARAAACSCT*AAPAAPPSPAWPWS
Trigger: GGACCAAGGCCATGCGGGAGAAGGAGGAGCAGCGGGGGCTGCGCAAGTACAACTACACGCTGCTGCGCGTGCGCCTCCCCGATGGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000591919.5
CDS GCA 90 bp AGGAGGCTCCCTCCTGGGGGTGTCTGTGCCGGTCCCAGGAGAACCTaGAGAGGCATCGGGTCAGCGGTGCTCCTGCGGGCCGACACTCAC +
Preference number: 5 (lower is better)
Translates to: RRLPPGGVCAGPRRT*RGIGSAVLLRADTH
Trigger: GTGAGTGTCGGCCCGCAGGAGCACCGCTGACCCGATGCCTCTGCAGGTTCTCCTGGGACCGGCACAGACACCCCCAGGAGGGAGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 90 bp GGAAGAAGCGGCCCAGTGACGCGAGGGCAGCAGACCATCTCCGGGTaGAAGGCACACCTCGGACACCCCATGGAGCCCACCCCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: GRSGPVTRGQQTISG*KAHLGHPMEPTPGA
Trigger: GGCACCAGGGGTGGGCTCCATGGGGTGTCCGAGGTGTGCCTTCCACCCGGAGATGGTCTGCTGCCCTCGCGTCACTGGGCCGCTTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587009.5
ENST00000588238.1
CDS-3UTR CAA 90 bp CAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCGGCTCAGATACCACGTaGGTCCCTGGGGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: QLHGWRPSRAHGAEPSISGSDTT*VPGASG
Trigger: CCCCGAGGCCCCAGGGACCAACGTGGTATCTGAGCC...GGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CAA 90 bp CAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGCGCTGCCTGTCCAGCTaGGCGCGCACGGGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: QSQVFPEVAWRPWGGGERRCLSS*ARTGSA
Trigger: TGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGCG...CCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCTCTCCCTCGGGGGCTaGGGCGCATCCCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASLSLGG*GASPQP
Trigger: GGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGAG...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp CGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGCTCTCCCTCGGGGGCTaGGGCGCATCCCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: RPSRAHGAEPSISRGGLELSLGG*GASPQP
Trigger: GGGCTGTGGGGATGCGCCCAAGCCCCCGAGGGAGAG...CTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS GCA 90 bp CCGGTCCCAGGAGAACCTGCAGAGGCATCGGGTCAGCGGTGCTCCTaGGGGCCGACACTCACCAGCCCGCACTCGTTCAAGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PVPGEPAEASGQRCS*GPTLTSPHSFKARF
Trigger: GAACCTGGCCTTGAACGAGTGCGGGCTGGTGAGTGTCGGCCCGCAGGAGCACCGCTGACCCGATGCCTCTGCAGGTTCTCCTGGGACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 90 bp TCTGTGCCGGTCCCAGGAGAACCTGCAGAGGCATCGGGTCAGCGGTaGTCCTGCGGGCCGACACTCACCAGCCCGCACTCGTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: SVPVPGEPAEASGQR*SCGPTLTSPHSFKA
Trigger: GGCCTTGAACGAGTGCGGGCTGGTGAGTGTCGGCCCGCAGGAGCACCGCTGACCCGATGCCTCTGCAGGTTCTCCTGGGACCGGCACAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 90 bp GGACCTGCCCAGGCCCCCTGCTCTGAGAACAAGGAGGCTCCCTCCTaGGGGTGTCTGTGCCGGTCCCAGGAGAACCTGCAGAGGCATCGG +
Preference number: 5 (lower is better)
Translates to: GPAQAPCSENKEAPS*GCLCRSQENLQRHR
Trigger: CCGATGCCTCTGCAGGTTCTCCTGGGACCGGCACAGACACCCCCAGGAGGGAGCCTCCTTGTTCTCAGAGCAGGGGGCCTGGGCAGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS-3UTR CAA 90 bp TGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGGCCATCTGTGCCTCATaGGTGGGTCCCTGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: WGRAKYFQRWLGGPGVAGAICAS*VGPWRG
Trigger: GCCCCGCCAGGGACCCACCAATGAGGCACAGATGGC...CCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp GCCCAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCAAGAGAATGGCCTCCTaGATGCAGGCGTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: AQFHSSTAGAPPVPMGQSKRMAS*MQASRW
Trigger: CCAGCGGGACGCCTGCATCAAGGAGGCCATTCTCTT...GCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS GCA 90 bp GCCCCCTGCTCTGAGAACAAGGAGGCTCCCTCCTGGGGGTGTCTGTaGCGGTCCCAGGAGAACCTGCAGAGGCATCGGGTCAGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: APCSENKEAPSWGCL*RSQENLQRHRVSGA
Trigger: AGCACCGCTGACCCGATGCCTCTGCAGGTTCTCCTGGGACCGGCACAGACACCCCCAGGAGGGAGCCTCCTTGTTCTCAGAGCAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS-3UTR CAA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCGCCATCTGTGCCTCATaGGTGGGTCCCTGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASAICAS*VGPWRG
Trigger: GCCCCGCCAGGGACCCACCAATGAGGCACAGATGGC...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTTTCTCCCGCATGGCCTaGGTCCGCAGCACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HCHPRHTGTGPMLQACSPFSRMA*VRSTLS
Trigger: GCTGAGCGTGCTGCGGACCAAGGCCATGCGGGAGAA...AGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGATTCTCCCGCATGGCCTaGGTCCGCAGCACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LHGWRPSRAHGAEPSISRFSRMA*VRSTLS
Trigger: GCTGAGCGTGCTGCGGACCAAGGCCATGCGGGAGAA...TCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp GCCCAATTCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCAGGGAGGGCTTAGATTaGTTGGTGTCCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: AQFHSSTAGAPPVPMGQSREGLD*LVSPGL
Trigger: GAGGCCTGGGGACACCAACAAATCTAAGCCCTCCCT...GCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGAATTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS GCA 90 bp CGCCACTTACAGAACCTCCCGCCACCATGGACGCCCCATCCCTCCTaGTCTCGCAGCCCCATGATGGACGTTCTGGAACCACTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: RHLQNLPPPWTPHPS*SRSPMMDVLEPLPG
Trigger: GCCCGGGAGTGGTTCCAGAACGTCCATCATGGGGCTGCGAGAGCAGGAGGGATGGGGCGTCCATGGTGGCGGGAGGTTCTGTAAGTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS GCA 90 bp CAGGGAAAGCCACTCACTGAGAGCCCGGGCCGCACGGCCCTCCGCTaGCCAGGTAACAGGGGCAGGAAAAGGAAGGCAGAACAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: QGKPLTESPGRTALR*PGNRGRKRKAEQRL
Trigger: AAGCCGCTGTTCTGCCTTCCTTTTCCTGCCCCTGTTACCTGGGCAGCGGAGGGCCGTGCGGCCCGGGCTCTCAGTGAGTGGCTTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS-3UTR CAA 90 bp AGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGAGGCTCAGATACCACGTaGGTCCCTGGGGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: RAKYFQRWLGGPGVAGRGGSDTT*VPGASG
Trigger: CCCCGAGGCCCCAGGGACCAACGTGGTATCTGAGCC...TCCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS TCA 90 bp GCTCAGCCACACTTGGCCTCTAGTCAGAGGGAAGAAGCGGCCCAGTaGCGCGAGGGCAGCAGACCATCTCCGGGTGGAAGGCACACCTCG +
Preference number: 5 (lower is better)
Translates to: AQPHLASSQREEAAQ*REGSRPSPGGRHTS
Trigger: CGAGGTGTGCCTTCCACCCGGAGATGGTCTGCTGCCCTCGCGTCACTGGGCCGCTTCTTCCCTCTGACTAGAGGCCAAGTGTGGCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587009.5
ENST00000588238.1
CDS-3UTR CAA 90 bp TGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCTGGTTGGGCTTCTCTTaGTGGGCCTTTTCCCCCACG +
Preference number: 5 (lower is better)
Translates to: CHPRHTGTGPMLQACSPAWLGFS*WAFSPT
Trigger: CGTGGGGGAAAAGGCCCACAAAGAGAAGCCCAACCA...GGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301281.11
CDS-3UTR CAA 90 bp GGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCCGCTGCCTGTCCAGCTaGGCGCGCACGGGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: GRCHVCLSGSFMTQLPSSRCLSS*ARTGSA
Trigger: TGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGCG...GCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATCATCCCCTCCTGCCGTaGTCACCCACATCCACAGAG +
Preference number: 5 (lower is better)
Translates to: RHTGTGPMLQACSPAQGDHPLLP*SPTSTE
Trigger: CTCTGTGGATGTGGGTGACAACGGCAGGAGGGGATG...ATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp TGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGCATCCCCTCCTGCCGTaGTCACCCACATCCACAGAG +
Preference number: 5 (lower is better)
Translates to: WGRAKYFQRWLGGPGVAGHPLLP*SPTSTE
Trigger: CTCTGTGGATGTGGGTGACAACGGCAGGAGGGGATG...CCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGACATCCCCTCCTGCCGTaGTCACCCACATCCACAGAG +
Preference number: 5 (lower is better)
Translates to: LHGWRPSRAHGAEPSISRHPLLP*SPTSTE
Trigger: CTCTGTGGATGTGGGTGACAACGGCAGGAGGGGATG...TCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS TCA 90 bp CGGTGGAGAAGTGCACGTTGGTCCCTGGGGCCTCGGGGCTCCCGCTaGCGGTGGCTTCGGCTTGAAGTTCCTTTCTCACCTGGTTTCGGA +
Preference number: 5 (lower is better)
Translates to: RWRSARWSLGPRGSR*RWLRLEVPFSPGFG
Trigger: TCCGAAACCAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGTCAGCGGGAGCCCCGAGGCCCCAGGGACCAACGTGCACTTCTCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591919.5
CDS GCA 90 bp AGCCCTGGAAGGGCACAATTAACCACAGCGGTGGGGAAGCCACAGTaGCGGAAGAGTGGAGAGCCAGAGCTGAAGGGCCGCAGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SPGRAQLTTAVGKPQ*RKSGEPELKGRSAS
Trigger: GCTGGCACTGCGGCCCTTCAGCTCTGGCTCTCCACTCTTCCGGCACTGTGGCTTCCCCACCGCTGTGGTTAATTGTGCCCTTCCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587009.5
ENST00000588238.1
ENST00000592358.1
CDS-3UTR CAA 90 bp AGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGACCGGGTCCCGCGCTCTaGAACTTGATGTCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: RAKYFQRWLGGPGVAGRGPGPAL*NLMSAL
Trigger: CAAGGCCGACATCAAGTTCAAGAGCGCGGGACCCGG...TCCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301281.11
CDS-3UTR CAA 90 bp CTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCAAGAGAATGGCCTCCTaGATGCAGGCGTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LRFVGVPRPLPRGLGRIPKRMAS*MQASRW
Trigger: CCAGCGGGACGCCTGCATCAAGGAGGCCATTCTCTT...GGGGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301281.11
ENST00000394765.7
CDS-3UTR CAA 90 bp CCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGTGCAGGTGGATGTaGTCCAGGTACTTGGCAATG +
Preference number: 5 (lower is better)
Translates to: PPTAHGNRTHAAGLLSCPGCRWM*SRYLAM
Trigger: CATTGCCAAGTACCTGGACAACATCCACCTGCACCC...TGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CAGCCACTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTCTGCTGTGAGGTaGAAGAAGTCCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: QPLPPTAHGNRTHAAGLLSSAVR*KKSPGS
Trigger: ACTGCCTGGGGACTTCTTCAACCTCACAGCAGAGGA...GAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp CTGCCACCCACGGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCTCCTCTGCTGTGAGGTaGAAGAAGTCCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LPPTAHGNRTHAAGLLSCSSAVR*KKSPGS
Trigger: ACTGCCTGGGGACTTCTTCAACCTCACAGCAGAGGA...GCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCCGTGGGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp CTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTAGCCTCTGCTCCCGCTaGATCTCCTCTGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: LAPLPCPWGRAKYFQRWLSLCSR*ISSAVR
Trigger: CCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCT...AAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCAGCCTCTGCTCCCGCTaGATCTCCTCTGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASSLCSR*ISSAVR
Trigger: CCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCT...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS TCA 90 bp TGGGCTCAGATACCACGTTGGTCCCTGGGGCCTCGGGGCTCCCGCTaGCGGTGGCTTCGGCTTGAAGTTCCTTTCTCACCTGGTTTCGGA +
Preference number: 5 (lower is better)
Translates to: WAQIPRWSLGPRGSR*RWLRLEVPFSPGFG
Trigger: TCCGAAACCAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGTCAGCGGGAGCCCCGAGGCCCCAGGGACCAACGTGGTATCTGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000592515.1
CDS CCA 90 bp GAGATCCATCAAGGCCACCGCCACTTACAGAACCTCCCGCCACCATaGACGCCCCATCCCTCCTGCTCTCGCAGCCCCATGATGGACGTT +
Preference number: 5 (lower is better)
Translates to: EIHQGHRHLQNLPPP*TPHPSCSRSPMMDV
Trigger: AACGTCCATCATGGGGCTGCGAGAGCAGGAGGGATGGGGCGTCCATGGTGGCGGGAGGTTCTGTAAGTGGCGGTGGCCTTGATGGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS CCA 90 bp TCAGCACGTAGAACTCCTCGGGGTCCTCTACAGCGTGGCAGGACATaGGTGTCACTGTGCAATGGAGAGACCCCCAAGCCGGGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SARRTPRGPLQRGRT*VSLCNGETPKPGPP
Trigger: AGGAGGGCCCGGCTTGGGGGTCTCTCCATTGCACAGTGACACCCATGTCCTGCCACGCTGTAGAGGACCCCGAGGAGTTCTACGTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587009.5
ENST00000588238.1
CDS-3UTR CAA 90 bp GGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCCGCGCTCTTGAACTaGATGTCGGCCTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: GLDLLVSPGLSLGGLGASPALLN*MSALNS
Trigger: GGAGTTCAAGGCCGACATCAAGTTCAAGAGCGCGGG...GGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000301281.11
CDS-3UTR CAA 90 bp TGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGGGGTGCAGGTGGATGTaGTCCAGGTACTTGGCAATG +
Preference number: 5 (lower is better)
Translates to: WGRAKYFQRWLGGPGVAGGCRWM*SRYLAM
Trigger: CATTGCCAAGTACCTGGACAACATCCACCTGCACCC...CCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp GGCACACGGGAACAGGACCCATGCTGCAGGCCTGCTCTCCTGCCCAGGGAGATGTCCTCTGCTGTGAGGTaGAAGAAGTCCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: GTREQDPCCRPALLPREMSSAVR*KKSPGS
Trigger: ACTGCCTGGGGACTTCTTCAACCTCACAGCAGAGGA...CATCTCCCTGGGCAGGAGAGCAGGCCTGCAGCATGGGTCCTGTTCCCGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCTTCTCCCGCATGGCCTaGGTCCGCAGCACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTFSRMA*VRSTLS
Trigger: GCTGAGCGTGCTGCGGACCAAGGCCATGCGGGAGAA...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCATCCCCAGGGAGGGCTTAGATTaGTTGGTGTCCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LRFVGVPRPLPRGLGRIPREGLD*LVSPGL
Trigger: GAGGCCTGGGGACACCAACAAATCTAAGCCCTCCCT...GGGGATGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp GCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAAGGGAGGGCTTAGATTaGTTGGTGTCCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: APLPCPWGRAKYFQRWLGREGLD*LVSPGL
Trigger: GAGGCCTGGGGACACCAACAAATCTAAGCCCTCCCT...TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp GCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGATGGTTGGGCTTCTCTTaGTGGGCCTTTTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: APLPCPWGRAKYFQRWLGWLGFS*WAFSGL
Trigger: CAGCCCGGAAAAGGCCCACAAAGAGAAGCCCAACCA...TCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394765.7
CDS-3UTR CAA 90 bp GGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCGTGGAGAAGTGCACGTaGGTCCCTGGGGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: GRCHVCLSGSFMTQLPSSVEKCT*VPGASG
Trigger: CCCCGAGGCCCCAGGGACCAACGTGCACTTCTCCAC...GCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591919.5
CDS TCA 90 bp TCCCGCCACCATGGACGCCCCATCCCTCCTGCTCTCGCAGCCCCATaGTGGACGTTCTGGAACCACTCCCGGGCCTCATGTTTACAAAGA +
Preference number: 5 (lower is better)
Translates to: SRHHGRPIPPALAAP*WTFWNHSRASCLQR
Trigger: TCTTTGTAAACATGAGGCCCGGGAGTGGTTCCAGAACGTCCATCATGGGGCTGCGAGAGCAGGAGGGATGGGGCGTCCATGGTGGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS TCA 90 bp CCCTCGTCCCCATTCCCTACTCAGCCAGGCCCTGTCCACTTACCCTaGTCCTGGGCGGGAAGCAACACCTTCTGGAACCCAATGGCCTCA +
Preference number: 5 (lower is better)
Translates to: PSSPFPTQPGPVHLP*SWAGSNTFWNPMAS
Trigger: TGAGGCCATTGGGTTCCAGAAGGTGTTGCTTCCCGCCCAGGATCAGGGTAAGTGGACAGGGCCTGGCTGAGTAGGGAATGGGGACGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587009.5
ENST00000588238.1
CDS CCA 90 bp GTGGAGAAGTGCAAGAGAATGGCCTCCTTGATGCAGGCGTCCCGCTaGTCCTTCCTCAGGGTGGCCCCAGTGAGCGGACAGGTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: VEKCKRMASLMQASR*SFLRVAPVSGQVKY
Trigger: GTACTTCACCTGTCCGCTCACTGGGGCCACCCTGAGGAAGGACCAGCGGGACGCCTGCATCAAGGAGGCCATTCTCTTGCACTTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000592515.1
CDS CCA 90 bp AATTGGGACCCGGCCCAGTCTGCCGGTTTAGTTGCTGAGATGATGTaGGGAGCGGGACAGAGCACGTGGATGCAGAGAGGCAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: NWDPAQSAGLVAEMM*GAGQSTWMQRGRAA
Trigger: GGCAGCTCTGCCTCTCTGCATCCACGTGCTCTGTCCCGCTCCCCACATCATCTCAGCAACTAAACCGGCAGACTGGGCCGGGTCCCAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS-3UTR CAA 90 bp TCCACAGCTCCACGGCTGGCGCCCCTCCCGTGCCCATGGGGCAGAGCCAAGTATACCTTGTTCTGCAGCTaGATCTTCCGGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: STAPRLAPLPCPWGRAKYTLFCS*IFRYFS
Trigger: GGAGAAGTACCGGAAGATCAAGCTGCAGAACAAGGT...ATACTTGGCTCTGCCCCATGGGCACGGGAGGGGCGCCAGCCGTGGAGCTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp GCTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAAGCCTCTGCTCCCGCTaGATCTCCTCTGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: ALLPREMPRVSVRQLHDTSLCSR*ISSAVR
Trigger: CCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCT...TGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp AGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGGGGTGGCGGGGAGAGGAAGGGAGGGCTTAGATTaGTTGGTGTCCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: RAKYFQRWLGGPGVAGRGREGLD*LVSPGL
Trigger: GAGGCCTGGGGACACCAACAAATCTAAGCCCTCCCT...TCCTCTCCCCGCCACCCCAGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS GCA 90 bp GATGTGGGGAGCGGGACAGAGCACGTGGATGCAGAGAGGCAGAGCTaGCAGATGGGCATGTCCCCAAGACAACAGCTTCCTTGGGATCAG +
Preference number: 5 (lower is better)
Translates to: DVGSGTEHVDAERQS*QMGMSPRQQLPWDQ
Trigger: CTGATCCCAAGGAAGCTGTTGTCTTGGGGACATGCCCATCTGGCAGCTCTGCCTCTCTGCATCCACGTGCTCTGTCCCGCTCCCCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 90 bp GCGTGGAGTAGTTATGAACTTGCTCGAGGCCCTGCTGCCAGTAAGTaGGAAAGCAGGATTCAAACCCAGGGACCTGCCCAGGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: AWSSYELARGPAASK*ESRIQTQGPAQAPC
Trigger: GCAGGGGGCCTGGGCAGGTCCCTGGGTTTGAATCCTGCTTTCCCACTTACTGGCAGCAGGGCCTCGAGCAAGTTCATAACTACTCCACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS-3UTR CAA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTGACGGTGGCTTCGGCTaGAAGTTCCTTTCTCACCTG +
Preference number: 5 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPDGGFG*KFLSHL
Trigger: CAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGTC...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CTCCCGTGCCCATGGGGCAGAGCCAAGTATTTCCAGAGGTGGCTTGGAGGCCCTTCCTCTGCTGTGAGGTaGAAGAAGTCCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LPCPWGRAKYFQRWLGGPSSAVR*KKSPGS
Trigger: ACTGCCTGGGGACTTCTTCAACCTCACAGCAGAGGA...AGGGCCTCCAAGCCACCTCTGGAAATACTTGGCTCTGCCCCATGGGCACGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS-3UTR CAA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAGCCTCTGCTCCCGCTaGATCTCCTCTGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTSLCSR*ISSAVR
Trigger: CCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCT...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000590466.2
ENST00000591919.5
CDS TCA 90 bp GGGGGCCAGAAGGCACGCCCACCTGAAACACCTTGTTCTGCAGCTTaGTCTTCCGGTACTTCTCCTCCTCGGGGTGCAGGTGGATGTTGT +
Preference number: 5 (lower is better)
Translates to: GGQKARPPETPCSAA*SSGTSPPRGAGGCC
Trigger: ACAACATCCACCTGCACCCCGAGGAGGAGAAGTACCGGAAGATCAAGCTGCAGAACAAGGTGTTTCAGGTGGGCGTGCCTTCTGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS-3UTR CAA 90 bp GCTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGACGGTGGCTTCGGCTaGAAGTTCCTTTCTCACCTG +
Preference number: 5 (lower is better)
Translates to: ALLPREMPRVSVRQLHDTDGGFG*KFLSHL
Trigger: CAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGTC...TGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp GAGGGCTTAGATTTGTTGGTGTCCCCAGGCCTCTCCCTCGGGGGCTTGGGCGCAACCTTGTTCTGCAGCTaGATCTTCCGGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: EGLDLLVSPGLSLGGLGATLFCS*IFRYFS
Trigger: GGAGAAGTACCGGAAGATCAAGCTGCAGAACAAGGT...TGCGCCCAAGCCCCCGAGGGAGAGGCCTGGGGACACCAACAAATCTAAGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS TCA 90 bp GAAGTCATAGCTGGAACTCTGGGGGTTTCCCAGAACCAGCCCTGCTaGCTGCGAACAGCGTCCCAGCATGGAGAGGCTGAGAACAGTACG +
Preference number: 5 (lower is better)
Translates to: EVIAGTLGVSQNQPC*LRTASQHGEAENST
Trigger: CGTACTGTTCTCAGCCTCTCCATGCTGGGACGCTGTTCGCAGTCAGCAGGGCTGGTTCTGGGAAACCCCCAGAGTTCCAGCTATGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS-3UTR CAA 90 bp GCTCTCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAATGTTGTCCAGGTACTaGGCAATGGTGTCCACACCC +
Preference number: 5 (lower is better)
Translates to: ALLPREMPRVSVRQLHDTMLSRY*AMVSTP
Trigger: GGGTGTGGACACCATTGCCAAGTACCTGGACAACAT...TGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS TCA 90 bp AAACCCCTGATTCCTTCAACACCTTCATTTTGCACACGGGTAAACTaGGGCCCAAGGAGGCCCAGCCCTTTGCCTGAGGCCTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: KPLIPSTPSFCTRVN*GPRRPSPLPEASGW
Trigger: CCACCCAGAGGCCTCAGGCAAAGGGCTGGGCCTCCTTGGGCCTCAGTTTACCCGTGTGCAAAATGAAGGTGTTGAAGGAATCAGGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000592358.1
CDS-3UTR CAA 90 bp TCCTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTAGACGGTGGCTTCGGCTaGAAGTTCCTTTCTCACCTG +
Preference number: 5 (lower is better)
Translates to: SCPGRCHVCLSGSFMTQLDGGFG*KFLSHL
Trigger: CAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGTC...TAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS-3UTR CAA 90 bp CTGCCCAGGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCATGTTGTCCAGGTACTaGGCAATGGTGTCCACACCC +
Preference number: 5 (lower is better)
Translates to: LPREMPRVSVRQLHDTVTMLSRY*AMVSTP
Trigger: GGGTGTGGACACCATTGCCAAGTACCTGGACAACAT...GGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCCTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS CCA 90 bp AGCAGAACTCAAGTCTCCCCTTCCGCCTTCTCAAGGCTAGATCCATaGGACTTGGAAGCCAGTGTGACGCGACAGAACTGTGCCTCACAC +
Preference number: 5 (lower is better)
Translates to: SRTQVSPSAFSRLDP*DLEASVTRQNCASH
Trigger: GTGTGAGGCACAGTTCTGTCGCGTCACACTGGCTTCCAAGTCCCATGGATCTAGCCTTGAGAAGGCGGAAGGGGAGACTTGAGTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS CCA 90 bp ACCAATGACCTACACACTGAGCCGGGGCTCATGCCAACTGAAAATTaGGACCCGGCCCAGTCTGCCGGTTTAGTTGCTGAGATGATGTGG +
Preference number: 5 (lower is better)
Translates to: TNDLHTEPGLMPTEN*DPAQSAGLVAEMMW
Trigger: CCACATCATCTCAGCAACTAAACCGGCAGACTGGGCCGGGTCCCAATTTTCAGTTGGCATGAGCCCCGGCTCAGTGTGTAGGTCATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 90 bp GCGTCCCAGCATGGAGAGGCTGAGAACAGTACGTACCCTAAGACCTaGAAAAGATTGGGGCACAAATCCACGCTCGGCACAGCCATCACA +
Preference number: 5 (lower is better)
Translates to: ASQHGEAENSTYPKT*KRLGHKSTLGTAIT
Trigger: TGTGATGGCTGTGCCGAGCGTGGATTTGTGCCCCAATCTTTTCCAGGTCTTAGGGTACGTACTGTTCTCAGCCTCTCCATGCTGGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS-3UTR CAA 90 bp GGGAGATGCCACGTGTGTCTGTCCGGCAGCTTCATGACACAGTTACCAAGCAGCATGTTGTCCAGGTACTaGGCAATGGTGTCCACACCC +
Preference number: 5 (lower is better)
Translates to: GRCHVCLSGSFMTQLPSSMLSRY*AMVSTP
Trigger: GGGTGTGGACACCATTGCCAAGTACCTGGACAACAT...GCTGCTTGGTAACTGTGTCATGAAGCTGCCGGACAGACACACGTGGCATCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
CDS CCA 90 bp ATGGAGAGGCTGAGAACAGTACGTACCCTAAGACCTGGAAAAGATTaGGGCACAAATCCACGCTCGGCACAGCCATCACACACGGCCACA +
Preference number: 5 (lower is better)
Translates to: MERLRTVRTLRPGKD*GTNPRSAQPSHTAT
Trigger: TGTGGCCGTGTGTGATGGCTGTGCCGAGCGTGGATTTGTGCCCCAATCTTTTCCAGGTCTTAGGGTACGTACTGTTCTCAGCCTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 90 bp ATTTGGGGTGACCGGTGCATAAAAGTCTTGCTCTCCATCTTGTCCTaGTACCTTCTACTGGCCGAACCCTTCACTGCTTGTGGCTCAACT +
Preference number: 5 (lower is better)
Translates to: IWGDRCIKVLLSILS*YLLLAEPFTACGST
Trigger: AGTTGAGCCACAAGCAGTGAAGGGTTCGGCCAGTAGAAGGTAGCAGGACAAGATGGAGAGCAAGACTTTTATGCACCGGTCACCCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 90 bp GAGGAGGAAAAGGATGCAGGTGAGGAGAGGCAGAATTTGTTGATTTaGGGTGACCGGTGCATAAAAGTCTTGCTCTCCATCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: EEEKDAGEERQNLLI*GDRCIKVLLSILSC
Trigger: GCAGGACAAGATGGAGAGCAAGACTTTTATGCACCGGTCACCCCAAATCAACAAATTCTGCCTCTCCTCACCTGCATCCTTTTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp TGCGAGGCCAGGGGCGAGGGCTGGAAGACGCGGCGCTaGCTGTCCAGCTTGGCGCGCACGGGCTCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: CEARGEGWKTRR*LSSLARTGSAA
Trigger: GGCTGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGCCTCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000591919.5
CDS GCA 72 bp TCCGCAGCACGCTCAGCCGCTCCACCGCCTCGGACCTaGACACGCGGGCCAGGTCACGAGGGCTGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: SAARSAAPPPRT*TRGPGHEGWPG
Trigger: CCCCGGCCAGCCCTCGTGACCTGGCCCGCGTGTGCAGGTCCGAGGCGGTGGAGCGGCTGAGCGTGCTGCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp CGAGCCGCCCTCCACGGGCATCGTTGGTGCCCACCCTaGAGGAGGCAGCCATCGGGGAGGCGCACGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RAALHGHRWCPP*RRQPSGRRTRS
Trigger: GCTGCGCGTGCGCCTCCCCGATGGCTGCCTCCTGCAGGGTGGGCACCAACGATGCCCGTGGAGGGCGGCTCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
CDS CCA 72 bp TCCTGCGGGGTGCTCCCTCGGCGTTGGCGGGCAGCGTaGACCTCCAGGCCTGCCCCCGATCCTGAGACCCGG +
Preference number: 6 (lower is better)
Translates to: SCGVLPRRWRAA*TSRPAPDPETR
Trigger: CCGGGTCTCAGGATCGGGGGCAGGCCTGGAGGTCCACGCTGCCCGCCAACGCCGAGGGAGCACCCCGCAGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587009.5
ENST00000588238.1
ENST00000592358.1
CDS CAA 90 bp TGCTCCAGCCGGGCTAGGGCGGCAGCGGCTGCCATCTGTGCCTCATaGGTGGGTCCCTGGCGGGGCGGCCTGGGGGCTGGCTGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: CSSRARAAAAAICAS*VGPWRGGLGAGWLG
Trigger: GCCCAACCAGCCAGCCCCCAGGCCGCCCCGCCAGGGACCCACCAATGAGGCACAGATGGCAGCCGCTGCCGCCCTAGCCCGGCTGGAGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS GCA 72 bp TCCTGCGATGTGGGGCCCCAGGCCCGGGACTGCTTCTaGTCCAGCCGGGCTAGGGCGGCAGCGGCTGCCATC +
Preference number: 6 (lower is better)
Translates to: SCDVGPQARDCF*SSRARAAAAAI
Trigger: GATGGCAGCCGCTGCCGCCCTAGCCCGGCTGGAGCAGAAGCAGTCCCGGGCCTGGGGCCCCACATCGCAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS CCA 72 bp CTAGGGCGGCAGCGGCTGCCATCTGTGCCTCATTGGTaGGTCCCTGGCGGGGCGGCCTGGGGGCTGGCTGGT +
Preference number: 6 (lower is better)
Translates to: LGRQRLPSVPHW*VPGGAAWGLAG
Trigger: ACCAGCCAGCCCCCAGGCCGCCCCGCCAGGGACCCACCAATGAGGCACAGATGGCAGCCGCTGCCGCCCTAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS GCA 72 bp ATGGTGTCCTGCGATGTGGGGCCCCAGGCCCGGGACTaGTTCTGCTCCAGCCGGGCTAGGGCGGCAGCGGCT +
Preference number: 6 (lower is better)
Translates to: MVSCDVGPQARD*FCSSRARAAAA
Trigger: AGCCGCTGCCGCCCTAGCCCGGCTGGAGCAGAAGCAGTCCCGGGCCTGGGGCCCCACATCGCAGGACACCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS GCA 72 bp CTACCAACCCGAGCCGCCCTCCACGGGCATCGTTGGTaGCCACCCTGCAGGAGGCAGCCATCGGGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: LPTRAALHGHRW*PPCRRQPSGRR
Trigger: GCGCCTCCCCGATGGCTGCCTCCTGCAGGGTGGGCACCAACGATGCCCGTGGAGGGCGGCTCGGGTTGGTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
CDS CCA 72 bp GCGAGGGCTGGAAGACGCGGCGCTGCCTGTCCAGCTTaGCGCGCACGGGCTCCGCAGCCAGCAGCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: ARAGRRGAACPA*RARAPQPAAVP
Trigger: AGGAACAGCTGCTGGCTGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCAGCCCTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000591919.5
CDS CCA 72 bp CCAGGCAGTTCGAACTGCGAGGCCAGGGGCGAGGGCTaGAAGACGCGGCGCTGCCTGTCCAGCTTGGCGCGC +
Preference number: 6 (lower is better)
Translates to: PGSSNCEARGEG*KTRRCLSSLAR
Trigger: GCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGCCTCGCAGTTCGAACTGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000591919.5
CDS CAA 90 bp CCTGCGGTAGGGGTAGGCCGTCACTCTGAGACCGAGAGTCGGCCCTaGCCGCGGCAGGGAACTCAGCGGGCAACCTGGGCGCGGGGATGC +
Preference number: 6 (lower is better)
Translates to: PAVGVGRHSETESRP*PRQGTQRATWARGC
Trigger: GCATCCCCGCGCCCAGGTTGCCCGCTGAGTTCCCTGCCGCGGCAAGGGCCGACTCTCGGTCTCAGAGTGACGGCCTACCCCTACCGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp CCTCCTGGGGGTGTCTGTGCCGGTCCCAGGAGAACCTaGAGAGGCATCGGGTCAGCGGTGCTCCTGCGGGCC +
Preference number: 6 (lower is better)
Translates to: PPGGVCAGPRRT*RGIGSAVLLRA
Trigger: GGCCCGCAGGAGCACCGCTGACCCGATGCCTCTGCAGGTTCTCCTGGGACCGGCACAGACACCCCCAGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CAA 72 bp GGGGTAGGCCGTCACTCTGAGACCGAGAGTCGGCCCTaGCCGCGGCAGGGAACTCAGCGGGCAACCTGGGCG +
Preference number: 6 (lower is better)
Translates to: GVGRHSETESRP*PRQGTQRATWA
Trigger: CGCCCAGGTTGCCCGCTGAGTTCCCTGCCGCGGCAAGGGCCGACTCTCGGTCTCAGAGTGACGGCCTACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS TCA 72 bp GCAGAGGGCACCTGCGGTAGGGGTAGGCCGTCACTCTaGGACCGAGAGTCGGCCCTTGCCGCGGCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: AEGTCGRGRPSL*DRESALAAAGN
Trigger: GTTCCCTGCCGCGGCAAGGGCCGACTCTCGGTCTCAGAGTGACGGCCTACCCCTACCGCAGGTGCCCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp GTCCCAGGAGAACCTGCAGAGGCATCGGGTCAGCGGTaGTCCTGCGGGCCGACACTCACCAGCCCGCACTCG +
Preference number: 6 (lower is better)
Translates to: VPGEPAEASGQR*SCGPTLTSPHS
Trigger: CGAGTGCGGGCTGGTGAGTGTCGGCCCGCAGGAGCACCGCTGACCCGATGCCTCTGCAGGTTCTCCTGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp GGCCCAGTGACGCGAGGGCAGCAGACCATCTCCGGGTaGAAGGCACACCTCGGACACCCCATGGAGCCCACC +
Preference number: 6 (lower is better)
Translates to: GPVTRGQQTISG*KAHLGHPMEPT
Trigger: GGTGGGCTCCATGGGGTGTCCGAGGTGTGCCTTCCACCCGGAGATGGTCTGCTGCCCTCGCGTCACTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587009.5
ENST00000588238.1
CDS CCA 72 bp TCAACTCTCGCTAGCTCCTCCAGGGAGCCCACCGCCTaGTGTGGGCCACCACCGGCTCCTGCAGGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: STLASSSREPTA*CGPPPAPAGQL
Trigger: CAGCTGGCCTGCAGGAGCCGGTGGTGGCCCACACCAGGCGGTGGGCTCCCTGGAGGAGCTAGCGAGAGTTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp GGAGAACCTGCAGAGGCATCGGGTCAGCGGTGCTCCTaGGGGCCGACACTCACCAGCCCGCACTCGTTCAAG +
Preference number: 6 (lower is better)
Translates to: GEPAEASGQRCS*GPTLTSPHSFK
Trigger: CTTGAACGAGTGCGGGCTGGTGAGTGTCGGCCCGCAGGAGCACCGCTGACCCGATGCCTCTGCAGGTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp CAGGCCCCCTGCTCTGAGAACAAGGAGGCTCCCTCCTaGGGGTGTCTGTGCCGGTCCCAGGAGAACCTGCAG +
Preference number: 6 (lower is better)
Translates to: QAPCSENKEAPS*GCLCRSQENLQ
Trigger: CTGCAGGTTCTCCTGGGACCGGCACAGACACCCCCAGGAGGGAGCCTCCTTGTTCTCAGAGCAGGGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp CCTTTCTCACCTGGTTTCGGATGGTGTCCTGCGATGTaGGGCCCCAGGCCCGGGACTGCTTCTGCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: PFSPGFGWCPAM*GPRPGTASAPA
Trigger: GGCTGGAGCAGAAGCAGTCCCGGGCCTGGGGCCCCACATCGCAGGACACCATCCGAAACCAGGTGAGAAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000591919.5
ENST00000592515.1
CDS CCA 72 bp AGGGGCCAGGCAGGGCAAAGGGGCCACACGCTCACTTaGCAATGGTGTCCACACCCAGCTTCACCCGGTCCT +
Preference number: 6 (lower is better)
Translates to: RGQAGQRGHTLT*QWCPHPASPGP
Trigger: AGGACCGGGTGAAGCTGGGTGTGGACACCATTGCCAAGTGAGCGTGTGGCCCCTTTGCCCTGCCTGGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000592358.1
CDS TCA 72 bp CACTTGGCCTCTAGTCAGAGGGAAGAAGCGGCCCAGTaGCGCGAGGGCAGCAGACCATCTCCGGGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: HLASSQREEAAQ*REGSRPSPGGR
Trigger: CCTTCCACCCGGAGATGGTCTGCTGCCCTCGCGTCACTGGGCCGCTTCTTCCCTCTGACTAGAGGCCAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587009.5
ENST00000588238.1
CDS TCA 72 bp CAGCCTGGGCCCCGGGGGCCAGAAGGCACGCCCACCTaGAACACCTTGTTCTGCAGCTTGATCTTCCGGTAC +
Preference number: 6 (lower is better)
Translates to: QPGPRGPEGTPT*NTLFCSLIFRY
Trigger: GTACCGGAAGATCAAGCTGCAGAACAAGGTGTTTCAGGTGGGCGTGCCTTCTGGCCCCCGGGGCCCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp CAGAACCTCCCGCCACCATGGACGCCCCATCCCTCCTaGTCTCGCAGCCCCATGATGGACGTTCTGGAACCA +
Preference number: 6 (lower is better)
Translates to: QNLPPPWTPHPS*SRSPMMDVLEP
Trigger: TGGTTCCAGAACGTCCATCATGGGGCTGCGAGAGCAGGAGGGATGGGGCGTCCATGGTGGCGGGAGGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS GCA 72 bp AGAAAGGAAAAGAGAGACCCTCCAAGACCGCAGCCCTaGCCACGCCCCAGGGCAGAGGCGACGCAGCCAAGA +
Preference number: 6 (lower is better)
Translates to: RKEKRDPPRPQP*PRPRAEATQPR
Trigger: TCTTGGCTGCGTCGCCTCTGCCCTGGGGCGTGGGCAGGGCTGCGGTCTTGGAGGGTCTCTCTTTTCCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS GCA 72 bp CCCTCAACTGCACAGCAGGGTCCCTCAGCAGCCCCCTaGGTCACACGGACCAATGACCTACACACTGAGCCG +
Preference number: 6 (lower is better)
Translates to: PSTAQQGPSAAP*VTRTNDLHTEP
Trigger: CGGCTCAGTGTGTAGGTCATTGGTCCGTGTGACGCAGGGGGCTGCTGAGGGACCCTGCTGTGCAGTTGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp TCTGAGAACAAGGAGGCTCCCTCCTGGGGGTGTCTGTaGCGGTCCCAGGAGAACCTGCAGAGGCATCGGGTC +
Preference number: 6 (lower is better)
Translates to: SENKEAPSWGCL*RSQENLQRHRV
Trigger: GACCCGATGCCTCTGCAGGTTCTCCTGGGACCGGCACAGACACCCCCAGGAGGGAGCCTCCTTGTTCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp TGCAAGAGAATGGCCTCCTTGATGCAGGCGTCCCGCTaGTCCTTCCTCAGGGTGGCCCCAGTGAGCGGACAG +
Preference number: 6 (lower is better)
Translates to: CKRMASLMQASR*SFLRVAPVSGQ
Trigger: CTGTCCGCTCACTGGGGCCACCCTGAGGAAGGACCAGCGGGACGCCTGCATCAAGGAGGCCATTCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000592515.1
CDS CAA 90 bp ACTCTGCTCCGCGGACGTCAGGCCCACCTGAGCCTCTGCTCCCGCTaGATCTCCTCTGCTGTGAGGTTGAAGAAGTCCCCAGGCAGTTCG +
Preference number: 6 (lower is better)
Translates to: TLLRGRQAHLSLCSR*ISSAVRLKKSPGSS
Trigger: CGAACTGCCTGGGGACTTCTTCAACCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCTCAGGTGGGCCTGACGTCCGCGGAGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS TCA 72 bp CTGGGTCGGTGGAGAAGTGCAAGAGAATGGCCTCCTTaGTGCAGGCGTCCCGCTGGTCCTTCCTCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: LGRWRSAREWPP*CRRPAGPSSGW
Trigger: CCACCCTGAGGAAGGACCAGCGGGACGCCTGCATCAAGGAGGCCATTCTCTTGCACTTCTCCACCGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000592515.1
CDS TCA 72 bp GCTGGAACTCTGGGGGTTTCCCAGAACCAGCCCTGCTaGCTGCGAACAGCGTCCCAGCATGGAGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: AGTLGVSQNQPC*LRTASQHGEAE
Trigger: CTCAGCCTCTCCATGCTGGGACGCTGTTCGCAGTCAGCAGGGCTGGTTCTGGGAAACCCCCAGAGTTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp TCGTTCAAGGCCAGGTTCTCGTCCTCGGACAGCTTCTaGCCTCCCGAGGCCAGCAGCTCAAAAGGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: SFKARFSSSDSF*PPEASSSKGSQ
Trigger: CTGGCTGCCTTTTGAGCTGCTGGCCTCGGGAGGGCAGAAGCTGTCCGAGGACGAGAACCTGGCCTTGAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000587009.5
ENST00000587324.1
ENST00000588238.1
ENST00000590466.2
ENST00000591919.5
CDS GCA 72 bp AGGGCACAATTAACCACAGCGGTGGGGAAGCCACAGTaGCGGAAGAGTGGAGAGCCAGAGCTGAAGGGCCGC +
Preference number: 6 (lower is better)
Translates to: RAQLTTAVGKPQ*RKSGEPELKGR
Trigger: GCGGCCCTTCAGCTCTGGCTCTCCACTCTTCCGGCACTGTGGCTTCCCCACCGCTGTGGTTAATTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587009.5
ENST00000588238.1
ENST00000592358.1
CDS GCA 72 bp ACTCTGCTCCGCGGACGTCAGGCCCACCTGAGCCTCTaGTCCCGCTTGATCTCCTCTGCTGTGAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: TLLRGRQAHLSL*SRLISSAVRLK
Trigger: CTTCAACCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCTCAGGTGGGCCTGACGTCCGCGGAGCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp CCGGCCCAGTCTGCCGGTTTAGTTGCTGAGATGATGTaGGGAGCGGGACAGAGCACGTGGATGCAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PAQSAGLVAEMM*GAGQSTWMQRG
Trigger: GCCTCTCTGCATCCACGTGCTCTGTCCCGCTCCCCACATCATCTCAGCAACTAAACCGGCAGACTGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp CAGGCAGGGCAAAGGGGCCACACGCTCACTTGGCAATaGTGTCCACACCCAGCTTCACCCGGTCCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: QAGQRGHTLTWQ*CPHPASPGPGL
Trigger: AAGACCAGGACCGGGTGAAGCTGGGTGTGGACACCATTGCCAAGTGAGCGTGTGGCCCCTTTGCCCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000592358.1
CDS CAA 72 bp CGCGGACGTCAGGCCCACCTGAGCCTCTGCTCCCGCTaGATCTCCTCTGCTGTGAGGTTGAAGAAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: RGRQAHLSLCSR*ISSAVRLKKSP
Trigger: TGGGGACTTCTTCAACCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCTCAGGTGGGCCTGACGTCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp CACGGACCAATGACCTACACACTGAGCCGGGGCTCATaGCAACTGAAAATTGGGACCCGGCCCAGTCTGCCG +
Preference number: 6 (lower is better)
Translates to: HGPMTYTLSRGS*QLKIGTRPSLP
Trigger: CGGCAGACTGGGCCGGGTCCCAATTTTCAGTTGGCATGAGCCCCGGCTCAGTGTGTAGGTCATTGGTCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp AGAACTCCTCGGGGTCCTCTACAGCGTGGCAGGACATaGGTGTCACTGTGCAATGGAGAGACCCCCAAGCCG +
Preference number: 6 (lower is better)
Translates to: RTPRGPLQRGRT*VSLCNGETPKP
Trigger: CGGCTTGGGGGTCTCTCCATTGCACAGTGACACCCATGTCCTGCCACGCTGTAGAGGACCCCGAGGAGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587009.5
ENST00000588238.1
CDS CAA 72 bp ACTGGGTCGGTGGAGAAGTGCAAGAGAATGGCCTCCTaGATGCAGGCGTCCCGCTGGTCCTTCCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: TGSVEKCKRMAS*MQASRWSFLRV
Trigger: CACCCTGAGGAAGGACCAGCGGGACGCCTGCATCAAGGAGGCCATTCTCTTGCACTTCTCCACCGACCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000592515.1
CDS TCA 72 bp TTGTGGGCCTTTTCCCCCACGGACTCTTTGAGCTTCTaGCCGGGTCCCGCGCTCTTGAACTTGATGTCGGCC +
Preference number: 6 (lower is better)
Translates to: LWAFSPTDSLSF*PGPALLNLMSA
Trigger: GGCCGACATCAAGTTCAAGAGCGCGGGACCCGGTCAGAAGCTCAAAGAGTCCGTGGGGGAAAAGGCCCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301281.11
CDS GCA 72 bp GGAAGGCAGAACAGCGGCTTGGAGCGGCCCCAGCTGTaGGCTCATCACAGAAAGGAAAAGAGAGACCCTCCA +
Preference number: 6 (lower is better)
Translates to: GRQNSGLERPQL*AHHRKEKRDPP
Trigger: TGGAGGGTCTCTCTTTTCCTTTCTGTGATGAGCGCACAGCTGGGGCCGCTCCAAGCCGCTGTTCTGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS GCA 72 bp AGCGGGACAGAGCACGTGGATGCAGAGAGGCAGAGCTaGCAGATGGGCATGTCCCCAAGACAACAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SGTEHVDAERQS*QMGMSPRQQLP
Trigger: AGGAAGCTGTTGTCTTGGGGACATGCCCATCTGGCAGCTCTGCCTCTCTGCATCCACGTGCTCTGTCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp GAACTCTGGGGGTTTCCCAGAACCAGCCCTGCTGACTaGGAACAGCGTCCCAGCATGGAGAGGCTGAGAACA +
Preference number: 6 (lower is better)
Translates to: ELWGFPRTSPAD*EQRPSMERLRT
Trigger: TGTTCTCAGCCTCTCCATGCTGGGACGCTGTTCGCAGTCAGCAGGGCTGGTTCTGGGAAACCCCCAGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS TCA 72 bp AAATTGGGACCCGGCCCAGTCTGCCGGTTTAGTTGCTaGGATGATGTGGGGAGCGGGACAGAGCACGTGGAT +
Preference number: 6 (lower is better)
Translates to: KLGPGPVCRFSC*DDVGSGTEHVD
Trigger: ATCCACGTGCTCTGTCCCGCTCCCCACATCATCTCAGCAACTAAACCGGCAGACTGGGCCGGGTCCCAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp GTTGAACGTGTAGATCTTCATGATGGAGGCGGCCACTaGGTCGGTGGAGAAGTGCTGGGAGGAGGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: VERVDLHDGGGH*VGGEVLGGGKQ
Trigger: CTGCTTCCCTCCTCCCAGCACTTCTCCACCGACCCAGTGGCCGCCTCCATCATGAAGATCTACACGTTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS CCA 72 bp CTACACACTGAGCCGGGGCTCATGCCAACTGAAAATTaGGACCCGGCCCAGTCTGCCGGTTTAGTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LHTEPGLMPTEN*DPAQSAGLVAE
Trigger: CTCAGCAACTAAACCGGCAGACTGGGCCGGGTCCCAATTTTCAGTTGGCATGAGCCCCGGCTCAGTGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CAA 72 bp CCCGAGCGTAGAAAGTGCCTGAGCCTCTGCTCCCGCTaGATCTCCTCTGCTGTGAGGTTGAAGAAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: PERRKCLSLCSR*ISSAVRLKKSP
Trigger: TGGGGACTTCTTCAACCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCTCAGGCACTTTCTACGCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590466.2
CDS CAA 90 bp ACTCAAGTCTCCCCTTCCGCCTTCTCAAGGCTAGATCCATGGGACTaGGAAGCCAGTGTGACGCGACAGAACTGTGCCTCACACTCTGGC +
Preference number: 6 (lower is better)
Translates to: TQVSPSAFSRLDPWD*EASVTRQNCASHSG
Trigger: GCCAGAGTGTGAGGCACAGTTCTGTCGCGTCACACTGGCTTCCAAGTCCCATGGATCTAGCCTTGAGAAGGCGGAAGGGGAGACTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS TCA 72 bp AAGGCACGCCCACCTGAAACACCTTGTTCTGCAGCTTaGTCTTCCGGTACTTCTCCTCCTCGGGGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: KARPPETPCSAA*SSGTSPPRGAG
Trigger: ACCTGCACCCCGAGGAGGAGAAGTACCGGAAGATCAAGCTGCAGAACAAGGTGTTTCAGGTGGGCGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CAA 72 bp TCCCCTTCCGCCTTCTCAAGGCTAGATCCATGGGACTaGGAAGCCAGTGTGACGCGACAGAACTGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: SPSAFSRLDPWD*EASVTRQNCAS
Trigger: TGAGGCACAGTTCTGTCGCGTCACACTGGCTTCCAAGTCCCATGGATCTAGCCTTGAGAAGGCGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS CAA 90 bp CATGGAGAGGCTGAGAACAGTACGTACCCTAAGACCTGGAAAAGATaGGGGCACAAATCCACGCTCGGCACAGCCATCACACACGGCCAC +
Preference number: 6 (lower is better)
Translates to: HGEAENSTYPKTWKR*GHKSTLGTAITHGH
Trigger: GTGGCCGTGTGTGATGGCTGTGCCGAGCGTGGATTTGTGCCCCAATCTTTTCCAGGTCTTAGGGTACGTACTGTTCTCAGCCTCTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp CAAGTCTCCCCTTCCGCCTTCTCAAGGCTAGATCCATaGGACTTGGAAGCCAGTGTGACGCGACAGAACTGT +
Preference number: 6 (lower is better)
Translates to: QVSPSAFSRLDP*DLEASVTRQNC
Trigger: ACAGTTCTGTCGCGTCACACTGGCTTCCAAGTCCCATGGATCTAGCCTTGAGAAGGCGGAAGGGGAGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588238.1
ENST00000593024.1
CDS CCA 72 bp AGTTATGAACTTGCTCGAGGCCCTGCTGCCAGTAAGTaGGAAAGCAGGATTCAAACCCAGGGACCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: SYELARGPAASK*ESRIQTQGPAQ
Trigger: CTGGGCAGGTCCCTGGGTTTGAATCCTGCTTTCCCACTTACTGGCAGCAGGGCCTCGAGCAAGTTCATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp GTTGAACGTGTAGATCTTCATGATGGAGGCGGCCACTaGGTCGGTGGAGAAGTGCAAGAGAATGGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: VERVDLHDGGGH*VGGEVQENGLL
Trigger: AAGGAGGCCATTCTCTTGCACTTCTCCACCGACCCAGTGGCCGCCTCCATCATGAAGATCTACACGTTCAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301281.11
ENST00000394765.7
ENST00000592358.1
CDS CCA 72 bp CTGAGAACAGTACGTACCCTAAGACCTGGAAAAGATTaGGGCACAAATCCACGCTCGGCACAGCCATCACAC +
Preference number: 6 (lower is better)
Translates to: LRTVRTLRPGKD*GTNPRSAQPSH
Trigger: GTGTGATGGCTGTGCCGAGCGTGGATTTGTGCCCCAATCTTTTCCAGGTCTTAGGGTACGTACTGTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp CATGGAGAGGCTGAGAACAGTACGTACCCTAAGACCTaGAAAAGATTGGGGCACAAATCCACGCTCGGCACA +
Preference number: 6 (lower is better)
Translates to: HGEAENSTYPKT*KRLGHKSTLGT
Trigger: TGTGCCGAGCGTGGATTTGTGCCCCAATCTTTTCCAGGTCTTAGGGTACGTACTGTTCTCAGCCTCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CAA 72 bp GCTGAGAACAGTACGTACCCTAAGACCTGGAAAAGATaGGGGCACAAATCCACGCTCGGCACAGCCATCACA +
Preference number: 6 (lower is better)
Translates to: AENSTYPKTWKR*GHKSTLGTAIT
Trigger: TGTGATGGCTGTGCCGAGCGTGGATTTGTGCCCCAATCTTTTCCAGGTCTTAGGGTACGTACTGTTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CAA 90 bp TTGTTGATTTGGGGTGACCGGTGCATAAAAGTCTTGCTCTCCATCTaGTCCTGCTACCTTCTACTGGCCGAACCCTTCACTGCTTGTGGC +
Preference number: 6 (lower is better)
Translates to: LLIWGDRCIKVLLSI*SCYLLLAEPFTACG
Trigger: GCCACAAGCAGTGAAGGGTTCGGCCAGTAGAAGGTAGCAGGACAAGATGGAGAGCAAGACTTTTATGCACCGGTCACCCCAAATCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS TCA 72 bp CCCTTTCCCCCAGAAGAACCAGACATCTGGTTTGCATaGGAAACCTCCCCAGAGTCGACATGTTCCCAAACA +
Preference number: 6 (lower is better)
Translates to: PFPPEEPDIWFA*ETSPESTCSQT
Trigger: TGTTTGGGAACATGTCGACTCTGGGGAGGTTTCTCATGCAAACCAGATGTCTGGTTCTTCTGGGGGAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS GCA 72 bp TCTTTGTGGGCCTTTTCCGGGCTGTGTCAATTTCTGTaGCGTAGGTCTATTAAAACCTTCTGGGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SLWAFSGLCQFL*RRSIKTFWEAR
Trigger: CCTGGCCTCCCAGAAGGTTTTAATAGACCTACGGCACAGAAATTGACACAGCCCGGAAAAGGCCCACAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394765.7
CDS CAA 90 bp GAGAGGCAGAATTTGTTGATTTGGGGTGACCGGTGCATAAAAGTCTaGCTCTCCATCTTGTCCTGCTACCTTCTACTGGCCGAACCCTTC +
Preference number: 6 (lower is better)
Translates to: ERQNLLIWGDRCIKV*LSILSCYLLLAEPF
Trigger: GAAGGGTTCGGCCAGTAGAAGGTAGCAGGACAAGATGGAGAGCAAGACTTTTATGCACCGGTCACCCCAAATCAACAAATTCTGCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588238.1
CDS CCA 72 bp TGTCAATTTCTGTGCCGTAGGTCTATTAAAACCTTCTaGGAGGCCAGGCTCTCAGTTCAAGCCCTATACTCC +
Preference number: 6 (lower is better)
Translates to: CQFLCRRSIKTF*EARLSVQALYS
Trigger: GGAGTATAGGGCTTGAACTGAGAGCCTGGCCTCCCAGAAGGTTTTAATAGACCTACGGCACAGAAATTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394765.7
CDS CCA 72 bp AAGGATGCAGGTGAGGAGAGGCAGAATTTGTTGATTTaGGGTGACCGGTGCATAAAAGTCTTGCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: KDAGEERQNLLI*GDRCIKVLLSI
Trigger: GATGGAGAGCAAGACTTTTATGCACCGGTCACCCCAAATCAACAAATTCTGCCTCTCCTCACCTGCATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588238.1