Pregenerated sensors for UBXN2B (Homo sapiens)
Ensembl gene IDs: ENSG00000215114Ensembl transcript IDs: ENST00000399598.7, ENST00000521796.1, ENST00000522978.1, ENST00000523409.5
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTaGGCTGAAGATTACTCCCAGGCCTTGAAACTTAAAGAAGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SKDDSETVNKPREQQ*AEDYSQALKLKEGC Trigger: GCACCCTTCTTTAAGTTTCAAGGCCTGGGAGTAATCTTCAGCTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 90 bp | TGCTGCTGTAACAAATACCTAAAAGTAGAAAAGTGGCTCTGGAATTaGGCAGTAGGTGGAGGCTGGAAGAATTCTGAGGAGCATGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: CCCNKYLKVEKWLWN*AVGGGWKNSEEHAR Trigger: TCTGGCATGCTCCTCAGAATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAGGTATTTGTTACAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 90 bp | CTATGGATTTCAAGACAAGGAGATAAGCCTAGATTGGATATCCGGTaGGCCTCATTTAATCATGAGTCCTGCAGAGAACCTCTCCACACT | + |
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Preference number: 1 (lower is better) Translates to: LWISRQGDKPRLDIR*ASFNHESCREPLHT Trigger: AGTGTGGAGAGGTTCTCTGCAGGACTCATGATTAAATGAGGCCCACCGGATATCCAATCTAGGCTTATCTCCTTGTCTTGAAATCCATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 90 bp | AGGTACTTGAGGTGCTGCTGTAACAAATACCTAAAAGTAGAAAAGTaGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RYLRCCCNKYLKVEK*LWNWAVGGGWKNSE Trigger: CTCAGAATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAGGTATTTGTTACAGCAGCACCTCAAGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 90 bp | AGAAACCAGGACTTGATGATTTGGGAAATTCGCGGCCTATTCAAATaGCAAAAGCCACTAAAACTAAGATTCACCGTCAGGACAGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: RNQDLMIWEIRGLFK*QKPLKLRFTVRTAF Trigger: AAAGGCTGTCCTGACGGTGAATCTTAGTTTTAGTGGCTTTTGCCATTTGAATAGGCCGCGAATTTCCCAAATCATCAAGTCCTGGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 90 bp | CAACCCTGCCAACAAATTGATCTTGGCACCGCGAAACTCTTAACCTaGACTCCTAACCTACAGAATTGTGAAGATAATAAATTTGTGCTA | + |
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Preference number: 1 (lower is better) Translates to: QPCQQIDLGTAKLLT*TPNLQNCEDNKFVL Trigger: TAGCACAAATTTATTATCTTCACAATTCTGTAGGTTAGGAGTCCAGGTTAAGAGTTTCGCGGTGCCAAGATCAATTTGTTGGCAGGGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 90 bp | ACTTGGGAACAGATAACTTGTTTTCTAGGTTCACAAGTGCACAGTTaGAATTATGTCCCAGAAATCACACACAGATCCTCTCCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: TWEQITCFLGSQVHS*NYVPEITHRSSPKL Trigger: AAGTTTGGGAGAGGATCTGTGTGTGATTTCTGGGACATAATTCCAACTGTGCACTTGTGAACCTAGAAAACAAGTTATCTGTTCCCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR TCA 90 bp | AATGAGTGCATCCCTGTGACATATGTAAAAGACCCACAAGTTTCTTaGCAACGTTATAGCAGCAGAAGCACCACCATTTTTAACAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: NECIPVTYVKDPQVS*QRYSSRSTTIFNRK Trigger: CTTTCTGTTAAAAATGGTGGTGCTTCTGCTGCTATAACGTTGTCAAGAAACTTGTGGGTCTTTTACATATGTCACAGGGATGCACTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR GCA 90 bp | TATTTAGCTGAGGATATTTCCAAGCAAGCTGTGGAAGGTACAGCCTaGTGTCTTCTTGCTGATTATAGTAAAATGTGGAAAGAGGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: YLAEDISKQAVEGTA*CLLADYSKMWKEVD Trigger: ATCTACCTCTTTCCACATTTTACTATAATCAGCAAGAAGACAGCAGGCTGTACCTTCCACAGCTTGCTTGGAAATATCCTCAGCTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAACCCAGAGAACAGCAGTaGGCTGAAGATTACTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GICYWRSGGKESLLHSGEPREQQ*AEDYSQ Trigger: CTGGGAGTAATCTTCAGCTCACTGCTGTTCTCTGGG...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATGGTGGGTGGATCACCTaGGGTTCGGAGTTCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: APFSICFCFLNRNVCNYYGGWIT*GSEFET Trigger: GGTCTCGAACTCCGAACCTCAGGTGATCCACCCACC...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACCTTCTTAAGAACTGCTaGCCTTTAGGCTGGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: LMAPFSICFCFLNRNVCNLLKNC*PLGWAW Trigger: CCACGCCCAGCCTAAAGGTCAGCAGTTCTTAAGAAG...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAGGAATGACAAGGAAATaGTTCTCCTGTAGAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GICYWRSGGKESLLHSGEGMTRK*FSCRAS Trigger: GGAGGCTCTACAGGAGAATCATTTCCTTGTCATTCC...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAGACCCACAAGTTTCTTaGCAACGTTATAGCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GICYWRSGGKESLLHSGEDPQVS*QRYSSR Trigger: TCTGCTGCTATAACGTTGTCAAGAAACTTGTGGGTC...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR GCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATAACAGAATGCAACCCTaGCAACAAATTGATCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNNRMQP*QQIDLG Trigger: GCCAAGATCAATTTGTTGGCAGGGTTGCATTCTGTT...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR GCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGAGCCTCCTAACAGAATaGAACCCTGCCAACAAATTG | + |
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Preference number: 2 (lower is better) Translates to: EKVKMTLRQSTSPENSSESLLTE*NPANKL Trigger: CAATTTGTTGGCAGGGTTGCATTCTGTTAGGAGGCT...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACAGAACCTCTCCACACTaGTGTCAGAGAGATGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LMAPFSICFCFLNRNVCNRTSPH*CQRDVV Trigger: TACCACATCTCTCTGACACCAGTGTGGAGAGGTTCT...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATATGTTACTGGAGAAGTaGAGGAAAGGAGTCCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNMLLEK*RKGVLV Trigger: AACAAGGACTCCTTTCCTCCACTTCTCCAGTAACAT...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGACCCTGCCAACAAATTaGTCTTGGCACCGCGAAACT | + |
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Preference number: 2 (lower is better) Translates to: THRSSPKLNLDGFNVRFETLPTN*SWHRET Trigger: AGTTTCGCGGTGCCAAGATCAATTTGTTGGCAGGGT...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR GCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGGGTGAGCAGAAATTATaGCATTGCACTCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: THRSSPKLNLDGFNVRFEGEQKL*HCTPAW Trigger: CCAGGCTGGAGTGCAATGGCATAATTTCTGCTCACC...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR GCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGTTTAATCATGAGTCCTaGAGAGAACCTCTCCACACT | + |
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Preference number: 2 (lower is better) Translates to: EKVKMTLRQSTSPENSSEFNHES*REPLHT Trigger: AGTGTGGAGAGGTTCTCTGCAGGACTCATGATTAAA...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATAGAAGGAAAAGCTTCTaGCTTCAGCAGAAATGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNRRKSF*LQQKCK Trigger: TTTGCATTTCTGCTGAAGCCAGAAGCTTTTCCTTCT...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGGAAGACATTCTAGGTTaGGCACACAGAATAGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: EKVKMTLRQSTSPENSSEEDILG*AHRIVF Trigger: AAACACTATTCTGTGTGCTCAACCTAGAATGTCTTC...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGTCACAAGCCAAGGAATaGGGATGTCCTGTAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: THRSSPKLNLDGFNVRFESQAKE*GCPVEG Trigger: ACCTTCTACAGGACATCCTCATTCCTTGGCTTGTGA...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGATGGATTGTGACTTTTaGGCACCTATGAGTGATGTA | + |
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Preference number: 2 (lower is better) Translates to: EKVKMTLRQSTSPENSSEMDCDF*APMSDV Trigger: TACATCACTCATAGGTGCTCAAAAGTCACAATCCAT...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAATCTGTTTCTGCTTTTTaGACAGGAACGTGTGTAACT | + |
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Preference number: 2 (lower is better) Translates to: GICYWRSGGKESLLHSGESVSAF*TGTCVT Trigger: AGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGA...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAATCACAAGTGCACAGTTaGAATTATGTCCCAGAAATC | + |
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Preference number: 2 (lower is better) Translates to: GICYWRSGGKESLLHSGESQVHS*NYVPEI Trigger: GATTTCTGGGACATAATTCCAACTGTGCACTTGTGA...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAACTTCAATATTTAGCTaGGGATATTTCCAAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GICYWRSGGKESLLHSGETSIFS*GYFQAS Trigger: GCTTGCTTGGAAATATCCTCAGCTAAATATTGAAGT...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGGCGAAACTCTTAACCTaGACTCCTAACCTACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: THRSSPKLNLDGFNVRFEAKLLT*TPNLQN Trigger: ATTCTGTAGGTTAGGAGTCCAGGTTAAGAGTTTCGC...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACATGTCCTGTAGAAGGTaGAATGACAAGGAAATGATT | + |
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Preference number: 2 (lower is better) Translates to: LMAPFSICFCFLNRNVCNMSCRR*NDKEMI Trigger: AATCATTTCCTTGTCATTCCACCTTCTACAGGACAT...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGCACTGGTTTTTAAGATaGAAGAAGGAGGTCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: THRSSPKLNLDGFNVRFEHWFLR*KKEVTS Trigger: GCTTGTGACCTCCTTCTTCCATCTTAAAAACCAGTG...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATAGATTGGATATCCGGTaGGCCTCATTTAATCATGAG | + |
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Preference number: 2 (lower is better) Translates to: APFSICFCFLNRNVCNYYRLDIR*ASFNHE Trigger: CTCATGATTAAATGAGGCCCACCGGATATCCAATCT...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGTGTAATAATGGATTGTaGCTTTTGAGCACCTATGAG | + |
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Preference number: 2 (lower is better) Translates to: THRSSPKLNLDGFNVRFECNNGL*LLSTYE Trigger: CTCATAGGTGCTCAAAAGTCACAATCCATTATTACA...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATAGACTTTTGAGTTGGTaGGACTCAGATAAGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: APFSICFCFLNRNVCNYYRLLSW*DSDKIL Trigger: CAAAATCTTATCTGAGTCTCACCAACTCAAAAGTCT...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATTCATGCCATCATACTTaGGAACAGATAACTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: APFSICFCFLNRNVCNYYSCHHT*EQITCF Trigger: AAAACAAGTTATCTGTTCCCAAGTATGATGGCATGA...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CAA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGAGGCAGGAGAATCTTTaGAACCTGGGAGGCGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: THRSSPKLNLDGFNVRFERQENL*NLGGGG Trigger: ACCTCCGCCTCCCAGGTTCAAAAGATTCTCCTGCCT...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CAA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAGATTACTCCCAGGCCTaGAAACTTAAAGAAGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: GICYWRSGGKESLLHSGEDYSQA*KLKEGC Trigger: GCACCCTTCTTTAAGTTTCAAGGCCTGGGAGTAATC...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CAA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAACCAGGACTTGATGATTaGGGAAATTCGCGGCCTATT | + |
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Preference number: 3 (lower is better) Translates to: GICYWRSGGKESLLHSGEPGLDD*GNSRPI Trigger: AATAGGCCGCGAATTTCCCAAATCATCAAGTCCTGG...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR TCA 72 bp | CCAAAAACAGAGACAGGATTTTCCAGGAAAGATACGTaGGGAGCCTCCTATCTAAATGAGTGCATCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: PKTETGFSRKDT*GASYLNECIPV Trigger: CACAGGGATGCACTCATTTAGATAGGAGGCTCCTCACGTATCTTTCCTGGAAAATCCTGTCTCTGTTTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 72 bp | TCAAGACAAGGAGATAAGCCTAGATTGGATATCCGGTaGGCCTCATTTAATCATGAGTCCTGCAGAGAACCT | + |
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Preference number: 3 (lower is better) Translates to: SRQGDKPRLDIR*ASFNHESCREP Trigger: AGGTTCTCTGCAGGACTCATGATTAAATGAGGCCCACCGGATATCCAATCTAGGCTTATCTCCTTGTCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 72 bp | AACAAATACCTAAAAGTAGAAAAGTGGCTCTGGAATTaGGCAGTAGGTGGAGGCTGGAAGAATTCTGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: NKYLKVEKWLWN*AVGGGWKNSEE Trigger: CTCCTCAGAATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAGGTATTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 72 bp | TGCTGTAACAAATACCTAAAAGTAGAAAAGTGGCTCTaGAATTGGGCAGTAGGTGGAGGCTGGAAGAATTCT | + |
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Preference number: 3 (lower is better) Translates to: CCNKYLKVEKWL*NWAVGGGWKNS Trigger: AGAATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAGGTATTTGTTACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CAA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAATTCACAAGTGCACAGTaGGAATTATGTCCCAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: GICYWRSGGKESLLHSGEFTSAQ*ELCPRN Trigger: ATTTCTGGGACATAATTCCAACTGTGCACTTGTGAA...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR TCA 72 bp | AAACTTAAAGAAGGGTGCCTCGCTGGTTTTGTAAATTaGTTGGTGCTGATGGCTCCTTTTTCCATCTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: KLKEGCLAGFVN*LVLMAPFSICF Trigger: GAAACAGATGGAAAAAGGAGCCATCAGCACCAATCAATTTACAAAACCAGCGAGGCACCCTTCTTTAAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR GCA 72 bp | GAGGATATTTCCAAGCAAGCTGTGGAAGGTACAGCCTaGTGTCTTCTTGCTGATTATAGTAAAATGTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: EDISKQAVEGTA*CLLADYSKMWK Trigger: TTTCCACATTTTACTATAATCAGCAAGAAGACAGCAGGCTGTACCTTCCACAGCTTGCTTGGAAATATCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR CCA 72 bp | TACTATGGATTTCAAGACAAGGAGATAAGCCTAGATTaGATATCCGGTGGGCCTCATTTAATCATGAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: YYGFQDKEISLD*ISGGPHLIMSP Trigger: AGGACTCATGATTAAATGAGGCCCACCGGATATCCAATCTAGGCTTATCTCCTTGTCTTGAAATCCATAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGGTAAGTTACAATGTTCTTTGGATGGGTGAGAGCACTGAATATCTGAGTCTTCAAACTAACCTTTaGAAATCTTCTGCCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: ELVSYNVLWMGESTEYLSLQTNL*KSSASS Trigger: ACTGCTGGCAGAAGATTTCAAAAGGTTAGTTTGAAG...ACTCAGATATTCAGTGCTCTCACCCATCCAAAGAACATTGTAACTTACCAGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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| 3UTR TCA 72 bp | ATCCCTGTGACATATGTAAAAGACCCACAAGTTTCTTaGCAACGTTATAGCAGCAGAAGCACCACCATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: IPVTYVKDPQVS*QRYSSRSTTIF Trigger: AAAAATGGTGGTGCTTCTGCTGCTATAACGTTGTCAAGAAACTTGTGGGTCTTTTACATATGTCACAGGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| 3UTR CCA 72 bp | CAGATAACTTGTTTTCTAGGTTCACAAGTGCACAGTTaGAATTATGTCCCAGAAATCACACACAGATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QITCFLGSQVHS*NYVPEITHRSS Trigger: AGAGGATCTGTGTGTGATTTCTGGGACATAATTCCAACTGTGCACTTGTGAACCTAGAAAACAAGTTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| 3UTR-3UTR CAA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGAGAAGACATTCTAGGTaGAGCACACAGAATAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: THRSSPKLNLDGFNVRFERRHSR*STQNSV Trigger: AACACTATTCTGTGTGCTCAACCTAGAATGTCTTCT...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| 3UTR GCA 72 bp | ACAGGAACGTGTGTAACTATTATTGTCTGCCTGTCATaGCATCATACTTGGGAACAGATAACTTGTTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TGTCVTIIVCLS*HHTWEQITCFL Trigger: TAGAAAACAAGTTATCTGTTCCCAAGTATGATGGCATGACAGGCAGACAATAATAGTTACACACGTTCCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| 3UTR CCA 72 bp | CAACAAATTGATCTTGGCACCGCGAAACTCTTAACCTaGACTCCTAACCTACAGAATTGTGAAGATAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: QQIDLGTAKLLT*TPNLQNCEDNK Trigger: TTTATTATCTTCACAATTCTGTAGGTTAGGAGTCCAGGTTAAGAGTTTCGCGGTGCCAAGATCAATTTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATGAAGACCTCCTCTCCTaGTCGCCGGGCTCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNEDLLS*SPGSGP Trigger: AGGCCCTGAGCCCGGCGAGCAGGAGAGGAGGTCTTC...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGGGTGGGTGGATCACCTaGGGTTCGGAGTTCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: THRSSPKLNLDGFNVRFEGGWIT*GSEFET Trigger: GGTCTCGAACTCCGAACCTCAGGTGATCCACCCACC...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGCTTCTTAAGAACTGCTaGCCTTTAGGCTGGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSELLKNC*PLGWAW Trigger: CCACGCCCAGCCTAAAGGTCAGCAGTTCTTAAGAAG...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATCACCTGAAGCTCTTGTaGCTTCATTCAGAGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNHLKLL*LHSEGQ Trigger: CTGTCCCTCTGAATGAAGCCACAAGAGCTTCAGGTG...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACAAGTGGCTCTGGAATTaGGCAGTAGGTGGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNKWLWN*AVGGGW Trigger: CCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTT...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATGGAATGACAAGGAAATaGTTCTCCTGTAGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNGMTRK*FSCRAS Trigger: GGAGGCTCTACAGGAGAATCATTTCCTTGTCATTCC...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACCCCAGAGAACAGCAGTaGGCTGAAGATTACTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNPREQQ*AEDYSQ Trigger: CTGGGAGTAATCTTCAGCTCACTGCTGTTCTCTGGG...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATAGGCTGGAAGAATTCTaGGGAGCATGCCAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNRLEEF*GACQKR Trigger: TCTTTTCTGGCATGCTCCTCAGAATTCTTCCAGCCT...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGGGTGAGCAGAAATTATaGCATTGCACTCCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSEGEQKL*HCTPAW Trigger: CCAGGCTGGAGTGCAATGGCATAATTTCTGCTCACC...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGGCAGTAGGTGGAGGCTaGAAGAATTCTGAGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSEAVGGG*KNSEEH Trigger: ATGCTCCTCAGAATTCTTCCAGCCTCCACCTACTGC...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATGTAGAAAAGTGGCTCTaGAATTGGGCAGTAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNVEKWL*NWAVGG Trigger: TCCACCTACTGCCCAATTCCAGAGCCACTTTTCTAC...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACACCCTGCCAACAAATTaGTCTTGGCACCGCGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNTLPTN*SWHRET Trigger: AGTTTCGCGGTGCCAAGATCAATTTGTTGGCAGGGT...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATGACCCACAAGTTTCTTaGCAACGTTATAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNDPQVS*QRYSSR Trigger: TCTGCTGCTATAACGTTGTCAAGAAACTTGTGGGTC...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAAGCCTCCTAACAGAATaGAACCCTGCCAACAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GICYWRSGGKESLLHSGESLLTE*NPANKL Trigger: CAATTTGTTGGCAGGGTTGCATTCTGTTAGGAGGCT...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGGTGGAAGGTACAGCCTaGTGTCTTCTTGCTGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSEVEGTA*CLLADY Trigger: ATAATCAGCAAGAAGACAGCAGGCTGTACCTTCCAC...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGGTATTCATGTTCACTTaGGTAAAACCGTTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSEVFMFT*VKPLRW Trigger: CCACCTCAACGGTTTTACTCAAGTGAACATGAATAC...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATAGATTTATCATCACCTaGAGCTCTTGTGGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNRFIIT*SSCGFI Trigger: AATGAAGCCACAAGAGCTTCAGGTGATGATAAATCT...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACGCTGGTTTTGTAAATTaGTTGGTGCTGATGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNAGFVN*LVLMAP Trigger: AGGAGCCATCAGCACCAATCAATTTACAAAACCAGC...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAAGCCCCATGTTCCCTTaGCTCTTTGAAAAGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GICYWRSGGKESLLHSGESPMFP*LFEKFI Trigger: AATGAACTTTTCAAAGAGGCAAGGGAACATGGGGCT...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGAACAGAATGCAACCCTaGCAACAAATTGATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSENRMQP*QQIDLG Trigger: GCCAAGATCAATTTGTTGGCAGGGTTGCATTCTGTT...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAAGATTGGATATCCGGTaGGCCTCATTTAATCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GICYWRSGGKESLLHSGERLDIR*ASFNHE Trigger: CTCATGATTAAATGAGGCCCACCGGATATCCAATCT...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAACGCGGCCTATTCAAATaGCAAAAGCCACTAAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: GICYWRSGGKESLLHSGERGLFK*QKPLKL Trigger: TAGTTTTAGTGGCTTTTGCCATTTGAATAGGCCGCG...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAATGTTACTGGAGAAGTaGAGGAAAGGAGTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GICYWRSGGKESLLHSGEMLLEK*RKGVLV Trigger: AACAAGGACTCCTTTCCTCCACTTCTCCAGTAACAT...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAATCCTCCACCTGTAAATaGCTTAGATTTATCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: GICYWRSGGKESLLHSGESSTCK*LRFIIT Trigger: GGTGATGATAAATCTAAGTCATTTACAGGTGGAGGA...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGTCTGTTTCTGCTTTTTaGACAGGAACGTGTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSESVSAF*TGTCVT Trigger: AGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGA...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGAACAAACTGATAAGTTaGTACTCAGCTGCAAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSENKLIS*YSAANV Trigger: CACGTTTGCAGCTGAGTATCAACTTATCAGTTTGTT...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAAGTTTTCTAGGTACTTaGGGTGCTGCTGTAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GICYWRSGGKESLLHSGESFLGT*GAAVTN Trigger: ATTTGTTACAGCAGCACCTCAAGTACCTAGAAAACT...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATATGTCCTGTAGAAGGTaGAATGACAAGGAAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNMSCRR*NDKEMI Trigger: AATCATTTCCTTGTCATTCCACCTTCTACAGGACAT...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| 3UTR CAA 72 bp | CTGCCTGTCATGCCATCATACTTGGGAACAGATAACTaGTTTTCTAGGTTCACAAGTGCACAGTTGGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LPVMPSYLGTDN*FSRFTSAQLEL Trigger: TAATTCCAACTGTGCACTTGTGAACCTAGAAAACAAGTTATCTGTTCCCAAGTATGATGGCATGACAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATTCACAAGCCAAGGAATaGGGATGTCCTGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: APFSICFCFLNRNVCNYYSQAKE*GCPVEG Trigger: ACCTTCTACAGGACATCCTCATTCCTTGGCTTGTGA...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR TCA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAAAGACTTTTGAGTTGGTaGGACTCAGATAAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GICYWRSGGKESLLHSGERLLSW*DSDKIL Trigger: CAAAATCTTATCTGAGTCTCACCAACTCAAAAGTCT...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACATCTTCATACAATTCTaGCAAGGCCAACTGCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNIFIQF*QGQLQI Trigger: GATTTGCAGTTGGCCTTGGCAGAATTGTATGAAGAT...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACAAGTTGATACTCAGCTaGAAACGTGTGCTACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNKLILS*KRVLPF Trigger: AAAAGGTAGCACACGTTTGCAGCTGAGTATCAACTT...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGTCCTATCTAAATGAGTaGATCCCTGTGACATATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSESYLNE*IPVTYV Trigger: TACATATGTCACAGGGATGCACTCATTTAGATAGGA...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | TGGATGGGTGAGAGCACTGAATATCTGAGTTTACTTTCACAAATTATAACTTCACACCTGAAGCTCTTGTaGCTTCATTCAGAGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: WMGESTEYLSLLSQIITSHLKLL*LHSEGQ Trigger: CTGTCCCTCTGAATGAAGCCACAAGAGCTTCAGGTG...TGAAGTTATAATTTGTGAAAGTAAACTCAGATATTCAGTGCTCTCACCCATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521796.1 |
||
| CDS-3UTR CCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACAGAAGGAAAAGCTTCTaGCTTCAGCAGAAATGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNRRKSF*LQQKCK Trigger: TTTGCATTTCTGCTGAAGCCAGAAGCTTTTCCTTCT...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATAGAACCTCTCCACACTaGTGTCAGAGAGATGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: APFSICFCFLNRNVCNYYRTSPH*CQRDVV Trigger: TACCACATCTCTCTGACACCAGTGTGGAGAGGTTCT...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGCTGTTAGTAGAAATATaGAATGTTAATGCTAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EKVKMTLRQSTSPENSSELLVEI*NVNARA Trigger: CGCCCTAGCATTAACATTCCATATTTCTACTAACAG...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACCTAAAAGTAGAAAAGTaGCTCTGGAATTGGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNLKVEK*LWNWAV Trigger: TACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGTAAGTTACAATGTTCTTTGGATGGGTGAGAGCACTGAATATCTGAGTACAATGTTCTTTGGATaGGTGAGAGCACTGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: ELVSYNVLWMGESTEYLSTMFFG*VRALNI Trigger: GATATTCAGTGCTCTCACCCATCCAAAGAACATTGT...ACTCAGATATTCAGTGCTCTCACCCATCCAAAGAACATTGTAACTTACCAGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521796.1 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGTAAGTTACAATGTTCTTTGGATGGGTGAGAGCACTGAATATCTGAGTAGTTACAATGTTCTTTaGATGGGTGAGAGCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELVSYNVLWMGESTEYLSSYNVL*MGESTE Trigger: TTCAGTGCTCTCACCCATCCAAAGAACATTGTAACT...ACTCAGATATTCAGTGCTCTCACCCATCCAAAGAACATTGTAACTTACCAGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521796.1 |
||
| CDS-3UTR TCA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTGTAATAATGGATTGTaGCTTTTGAGCACCTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LMAPFSICFCFLNRNVCNCNNGL*LLSTYE Trigger: CTCATAGGTGCTCAAAAGTCACAATCCATTATTACA...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000399598.7 |
||
| 3UTR CAA 72 bp | ACAGATAACTTGTTTTCTAGGTTCACAAGTGCACAGTaGGAATTATGTCCCAGAAATCACACACAGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDNLFSRFTSAQ*ELCPRNHTQIL Trigger: GAGGATCTGTGTGTGATTTCTGGGACATAATTCCAACTGTGCACTTGTGAACCTAGAAAACAAGTTATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR TCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGGAAGACATTCTAGGTTaGGCACACAGAATAGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: THRSSPKLNLDGFNVRFEEDILG*AHRIVF Trigger: AAACACTATTCTGTGTGCTCAACCTAGAATGTCTTC...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGTCACAAGTGCACAGTTaGAATTATGTCCCAGAAATC | + |
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Preference number: 4 (lower is better) Translates to: THRSSPKLNLDGFNVRFESQVHS*NYVPEI Trigger: GATTTCTGGGACATAATTCCAACTGTGCACTTGTGA...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR TCA 90 bp | TGGATGGGTGAGAGCACTGAATATCTGAGTTTACTTTCACAAATTATAACTTCAGTATTCATGTTCACTTaGGTAAAACCGTTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WMGESTEYLSLLSQIITSVFMFT*VKPLRW Trigger: CCACCTCAACGGTTTTACTCAAGTGAACATGAATAC...TGAAGTTATAATTTGTGAAAGTAAACTCAGATATTCAGTGCTCTCACCCATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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| CDS-3UTR TCA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATATGGATTGTGACTTTTaGGCACCTATGAGTGATGTA | + |
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Preference number: 4 (lower is better) Translates to: APFSICFCFLNRNVCNYYMDCDF*APMSDV Trigger: TACATCACTCATAGGTGCTCAAAAGTCACAATCCAT...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR GCA 90 bp | TGGATGGGTGAGAGCACTGAATATCTGAGTTTACTTTCACAAATTATAACTTCAAGCCCCATGTTCCCTTaGCTCTTTGAAAAGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: WMGESTEYLSLLSQIITSSPMFP*LFEKFI Trigger: AATGAACTTTTCAAAGAGGCAAGGGAACATGGGGCT...TGAAGTTATAATTTGTGAAAGTAAACTCAGATATTCAGTGCTCTCACCCATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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| CDS-3UTR GCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGTTTTCCATCTGTTTCTaGTTTTTGAACAGGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: THRSSPKLNLDGFNVRFEFSICF*FLNRNV Trigger: CACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAA...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR GCA 90 bp | TGGATGGGTGAGAGCACTGAATATCTGAGTTTACTTTCACAAATTATAACTTCAAATTTCAGGCATACATaGAATGAGAGTCACCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: WMGESTEYLSLLSQIITSNFRHT*NESHPS Trigger: AGAGGGGTGACTCTCATTGCATGTATGCCTGAAATT...TGAAGTTATAATTTGTGAAAGTAAACTCAGATATTCAGTGCTCTCACCCATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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| 3UTR CAA 72 bp | TGTAACTATTATTGTCTGCCTGTCATGCCATCATACTaGGGAACAGATAACTTGTTTTCTAGGTTCACAAGT | + |
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Preference number: 4 (lower is better) Translates to: CNYYCLPVMPSY*GTDNLFSRFTS Trigger: ACTTGTGAACCTAGAAAACAAGTTATCTGTTCCCAAGTATGATGGCATGACAGGCAGACAATAATAGTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR TCA 90 bp | TGGATGGGTGAGAGCACTGAATATCTGAGTTTACTTTCACAAATTATAACTTCAAGATTTATCATCACCTaGAGCTCTTGTGGCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: WMGESTEYLSLLSQIITSRFIIT*SSCGFI Trigger: AATGAAGCCACAAGAGCTTCAGGTGATGATAAATCT...TGAAGTTATAATTTGTGAAAGTAAACTCAGATATTCAGTGCTCTCACCCATCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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| CDS-3UTR TCA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATGTGTGCTACCTTTTGTaGAAAAGTAAAGATGACTCT | + |
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Preference number: 4 (lower is better) Translates to: APFSICFCFLNRNVCNYYVCYLL*KSKDDS Trigger: AGAGTCATCTTTACTTTTTCACAAAAGGTAGCACAC...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CCA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGTCATGCCATCATACTTaGGAACAGATAACTTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: THRSSPKLNLDGFNVRFESCHHT*EQITCF Trigger: AAAACAAGTTATCTGTTCCCAAGTATGATGGCATGA...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR TCA 90 bp | TGGATGGGTGAGAGCACTGAATATCTGAGTTTACTTTCACAAATTATAACTTCATCTAACATAAGTTGCTaGATTTCAGGCATACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: WMGESTEYLSLLSQIITSSNISC*ISGIHA Trigger: TGCATGTATGCCTGAAATTCAGCAACTTATGTTAGA...TGAAGTTATAATTTGTGAAAGTAAACTCAGATATTCAGTGCTCTCACCCATCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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| CDS-3UTR CAA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATCATCACCTGAAGCTCTaGTGGCTTCATTCAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNHHLKL*WLHSEG Trigger: TCCCTCTGAATGAAGCCACAAGAGCTTCAGGTGATG...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATCGCTGGTTTTGTAAATaGATTGGTGCTGATGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNRWFCK*IGADGS Trigger: GGAGCCATCAGCACCAATCAATTTACAAAACCAGCG...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | GAGCTGGTAAGTTACAATGTTCTTTGGATGGGTGAGAGCACTGAATATCTGAGTCATCACCTGAAGCTCTaGTGGCTTCATTCAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: ELVSYNVLWMGESTEYLSHHLKL*WLHSEG Trigger: TCCCTCTGAATGAAGCCACAAGAGCTTCAGGTGATG...ACTCAGATATTCAGTGCTCTCACCCATCCAAAGAACATTGTAACTTACCAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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| CDS-3UTR CAA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGGATTACTCCCAGGCCTaGAAACTTAAAGAAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EKVKMTLRQSTSPENSSEDYSQA*KLKEGC Trigger: GCACCCTTCTTTAAGTTTCAAGGCCTGGGAGTAATC...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | GCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACTATTATAGGCAGGAGAATCTTTaGAACCTGGGAGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: APFSICFCFLNRNVCNYYRQENL*NLGGGG Trigger: ACCTCCGCCTCCCAGGTTCAAAAGATTCTCCTGCCT...ATAATAGTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS TCA 90 bp | TTGTGGCTTCATTCAGAGGGACAGCCCCATGTTCCCTTGCCTCTTTaGAAAGTTCATTCACAATTTTCCCAGTTGAAGGTCGAACTATAT | + |
|
Preference number: 5 (lower is better) Translates to: LWLHSEGQPHVPLPL*KVHSQFSQLKVELY Trigger: ATATAGTTCGACCTTCAACTGGGAAAATTGTGAATGAACTTTTCAAAGAGGCAAGGGAACATGGGGCTGTCCCTCTGAATGAAGCCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000399598.7 ENST00000521796.1 ENST00000522978.1 ENST00000523409.5 |
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| CDS-3UTR CAA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATAGAAGACATTCTAGGTaGAGCACACAGAATAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNRRHSR*STQNSV Trigger: AACACTATTCTGTGTGCTCAACCTAGAATGTCTTCT...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | CTAAAAGTAGAAAAGTGGCTCTGGAATTGGGCAGTAGGTGGAGGCTGGAAGAATCAGCCTGCTGTCTTCTaGCTGATTATAGTAAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LKVEKWLWNWAVGGGWKNQPAVF*LIIVKC Trigger: ACATTTTACTATAATCAGCAAGAAGACAGCAGGCTG...ATTCTTCCAGCCTCCACCTACTGCCCAATTCCAGAGCCACTTTTCTACTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGGAGTTTTCTAGGTACTaGAGGTGCTGCTGTAACAAA | + |
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Preference number: 5 (lower is better) Translates to: EKVKMTLRQSTSPENSSEEFSRY*RCCCNK Trigger: TTTGTTACAGCAGCACCTCAAGTACCTAGAAAACTC...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | GGAATATGTTACTGGAGAAGTGGAGGAAAGGAGTCCTTGTTACATAGTGGCGAATGTATTCATGTTCACTaGAGTAAAACCGTTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GICYWRSGGKESLLHSGECIHVH*SKTVEV Trigger: CACCTCAACGGTTTTACTCAAGTGAACATGAATACA...TTCGCCACTATGTAACAAGGACTCCTTTCCTCCACTTCTCCAGTAACATATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGTTCACAAGTGCACAGTaGGAATTATGTCCCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: EKVKMTLRQSTSPENSSEFTSAQ*ELCPRN Trigger: ATTTCTGGGACATAATTCCAACTGTGCACTTGTGAA...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | GAAAAAGTAAAGATGACTCTGAGACAGTCAACAAGCCCAGAGAACAGCAGTGAGATCTGTTTCTGCTTTTaGAACAGGAACGTGTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: EKVKMTLRQSTSPENSSEICFCF*NRNVCN Trigger: GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGAT...CTCACTGCTGTTCTCTGGGCTTGTTGACTGTCTCAGAGTCATCTTTACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | CTGATGGCTCCTTTTTCCATCTGTTTCTGCTTTTTGAACAGGAACGTGTGTAACGTGGAAAGAGGTAGATaGAGGGAAGACCTGTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LMAPFSICFCFLNRNVCNVERGR*REDLLN Trigger: ATTTAACAGGTCTTCCCTCAATCTACCTCTTTCCAC...GTTACACACGTTCCTGTTCAAAAAGCAGAAACAGATGGAAAAAGGAGCCATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | ACACACAGATCCTCTCCCAAACTTAATTTAGATGGCTTCAATGTGAGATTTGAGGGAGGAAAGGAGTCCTaGTTACATAGTGGCGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: THRSSPKLNLDGFNVRFEGGKES*LHSGEK Trigger: CTTTTCGCCACTATGTAACAAGGACTCCTTTCCTCC...CTCAAATCTCACATTGAAGCCATCTAAATTAAGTTTGGGAGAGGATCTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399598.7 |
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| CDS-3UTR CAA 90 bp | TGGATGGGTGAGAGCACTGAATATCTGAGTTTACTTTCACAAATTATAACTTCATGTATTCATGTTCACTaGAGTAAAACCGTTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WMGESTEYLSLLSQIITSCIHVH*SKTVEV Trigger: CACCTCAACGGTTTTACTCAAGTGAACATGAATACA...TGAAGTTATAATTTGTGAAAGTAAACTCAGATATTCAGTGCTCTCACCCATCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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| CDS-3UTR CAA 90 bp | TGGATGGGTGAGAGCACTGAATATCTGAGTTTACTTTCACAAATTATAACTTCACTTCAAACTAACCTTTaGAAATCTTCTGCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WMGESTEYLSLLSQIITSLQTNL*KSSASS Trigger: ACTGCTGGCAGAAGATTTCAAAAGGTTAGTTTGAAG...TGAAGTTATAATTTGTGAAAGTAAACTCAGATATTCAGTGCTCTCACCCATCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521796.1 |
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